Index of /runs/CPTAC3_LSCC_DWG/CPTAC3-LSCC-v3beta/MUTSIG_2CV__UMich_v2

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[PARENTDIR]Parent Directory  -  
[IMG]ARID1A.stick_fig.jpg2020-04-25 00:10 49K 
[ ]ARID1A.stick_fig.pdf2020-04-25 00:10 4.7K 
[TXT]ARID1A.stick_fig.txt2020-04-24 23:59 1.8K 
[IMG]BRCA2.stick_fig.jpg2020-04-25 00:10 53K 
[ ]BRCA2.stick_fig.pdf2020-04-25 00:10 3.9K 
[TXT]BRCA2.stick_fig.txt2020-04-24 23:59 1.5K 
[IMG]CDKN2A.stick_fig.jpg2020-04-25 00:10 39K 
[ ]CDKN2A.stick_fig.pdf2020-04-25 00:10 4.1K 
[TXT]CDKN2A.stick_fig.txt2020-04-24 23:58 1.1K 
[ ]CPTAC3-LSCC-v3beta.final_analysis_set.maf2020-04-25 00:10 234M 
[ ]CPTAC3-LSCC-v3beta.final_analysis_set.maf.mutation_CCG_histogram.ai2020-04-25 00:02 232K 
[ ]CPTAC3-LSCC-v3beta.final_analysis_set.maf.mutation_CCG_histogram.fig2020-04-25 00:02 45K 
[IMG]CPTAC3-LSCC-v3beta.final_analysis_set.maf.mutation_CCG_histogram.png2020-04-25 00:02 16K 
[ ]CPTAC3-LSCC-v3beta.final_analysis_set.maf.mutation_coverage.fig2020-04-25 00:02 10K 
[IMG]CPTAC3-LSCC-v3beta.final_analysis_set.maf.mutation_coverage.png2020-04-25 00:03 13K 
[ ]CPTAC3-LSCC-v3beta.final_analysis_set.maf.mutation_histogram.ai2020-04-25 00:02 36K 
[ ]CPTAC3-LSCC-v3beta.final_analysis_set.maf.mutation_histogram.fig2020-04-25 00:02 17K 
[IMG]CPTAC3-LSCC-v3beta.final_analysis_set.maf.mutation_histogram.png2020-04-25 00:02 14K 
[TXT]CPTAC3-LSCC-v3beta.final_analysis_set.maf.mutation_legos.html2020-04-25 00:03 8.0K 
[ ]CPTAC3-LSCC-v3beta.final_analysis_set.maf.mutation_legos.ps2020-04-25 00:03 30M 
[ ]CPTAC3-LSCC-v3beta.final_analysis_set.maf.mutation_profile.ai2020-04-25 00:10 263K 
[ ]CPTAC3-LSCC-v3beta.final_analysis_set.maf.mutation_profile.fig2020-04-25 00:02 21K 
[IMG]CPTAC3-LSCC-v3beta.final_analysis_set.maf.mutation_profile.png2020-04-25 00:10 43K 
[ ]CPTAC3-LSCC-v3beta.final_analysis_set.maf.mutation_profile_AF.ai2020-04-25 00:10 846K 
[ ]CPTAC3-LSCC-v3beta.final_analysis_set.maf.mutation_profile_AF.fig2020-04-25 00:02 28K 
[IMG]CPTAC3-LSCC-v3beta.final_analysis_set.maf.mutation_profile_AF.png2020-04-25 00:10 47K 
[ ]CPTAC3-LSCC-v3beta.final_analysis_set.maf.mutation_profile_counts.ai2020-04-25 00:02 258K 
[ ]CPTAC3-LSCC-v3beta.final_analysis_set.maf.mutation_profile_counts.fig2020-04-25 00:02 20K 
[IMG]CPTAC3-LSCC-v3beta.final_analysis_set.maf.mutation_profile_counts.png2020-04-25 00:02 41K 
[ ]CPTAC3-LSCC-v3beta.final_analysis_set.maf.mutation_profile_normalized.ai2020-04-25 00:02 263K 
[ ]CPTAC3-LSCC-v3beta.final_analysis_set.maf.mutation_profile_normalized.fig2020-04-25 00:02 21K 
[IMG]CPTAC3-LSCC-v3beta.final_analysis_set.maf.mutation_profile_normalized.png2020-04-25 00:02 41K 
[ ]CPTAC3-LSCC-v3beta.final_analysis_set.maf.mutation_profile_samples_1-12.ai2020-04-25 00:02 2.6M 
[ ]CPTAC3-LSCC-v3beta.final_analysis_set.maf.mutation_profile_samples_1-12.fig2020-04-25 00:02 81K 
[IMG]CPTAC3-LSCC-v3beta.final_analysis_set.maf.mutation_profile_samples_1-12.png2020-04-25 00:02 66K 
[ ]CPTAC3-LSCC-v3beta.final_analysis_set.maf.mutation_profile_samples_13-24.ai2020-04-25 00:02 2.6M 
[ ]CPTAC3-LSCC-v3beta.final_analysis_set.maf.mutation_profile_samples_13-24.fig2020-04-25 00:02 80K 
[IMG]CPTAC3-LSCC-v3beta.final_analysis_set.maf.mutation_profile_samples_13-24.png2020-04-25 00:02 66K 
[ ]CPTAC3-LSCC-v3beta.final_analysis_set.maf.mutation_profile_samples_25-36.ai2020-04-25 00:02 2.6M 
[ ]CPTAC3-LSCC-v3beta.final_analysis_set.maf.mutation_profile_samples_25-36.fig2020-04-25 00:02 80K 
[IMG]CPTAC3-LSCC-v3beta.final_analysis_set.maf.mutation_profile_samples_25-36.png2020-04-25 00:02 66K 
[ ]CPTAC3-LSCC-v3beta.final_analysis_set.maf.mutation_profile_samples_37-48.ai2020-04-25 00:02 2.6M 
[ ]CPTAC3-LSCC-v3beta.final_analysis_set.maf.mutation_profile_samples_37-48.fig2020-04-25 00:02 81K 
[IMG]CPTAC3-LSCC-v3beta.final_analysis_set.maf.mutation_profile_samples_37-48.png2020-04-25 00:02 65K 
[ ]CPTAC3-LSCC-v3beta.final_analysis_set.maf.mutation_profile_samples_49-60.ai2020-04-25 00:02 2.6M 
[ ]CPTAC3-LSCC-v3beta.final_analysis_set.maf.mutation_profile_samples_49-60.fig2020-04-25 00:02 80K 
[IMG]CPTAC3-LSCC-v3beta.final_analysis_set.maf.mutation_profile_samples_49-60.png2020-04-25 00:02 66K 
[ ]CPTAC3-LSCC-v3beta.final_analysis_set.maf.mutation_profile_samples_61-72.ai2020-04-25 00:02 2.6M 
[ ]CPTAC3-LSCC-v3beta.final_analysis_set.maf.mutation_profile_samples_61-72.fig2020-04-25 00:02 81K 
[IMG]CPTAC3-LSCC-v3beta.final_analysis_set.maf.mutation_profile_samples_61-72.png2020-04-25 00:02 65K 
[ ]CPTAC3-LSCC-v3beta.final_analysis_set.maf.mutation_profile_samples_73-84.ai2020-04-25 00:02 2.6M 
[ ]CPTAC3-LSCC-v3beta.final_analysis_set.maf.mutation_profile_samples_73-84.fig2020-04-25 00:02 80K 
[IMG]CPTAC3-LSCC-v3beta.final_analysis_set.maf.mutation_profile_samples_73-84.png2020-04-25 00:02 66K 
[ ]CPTAC3-LSCC-v3beta.final_analysis_set.maf.mutation_profile_samples_85-96.ai2020-04-25 00:02 2.6M 
[ ]CPTAC3-LSCC-v3beta.final_analysis_set.maf.mutation_profile_samples_85-96.fig2020-04-25 00:02 80K 
[IMG]CPTAC3-LSCC-v3beta.final_analysis_set.maf.mutation_profile_samples_85-96.png2020-04-25 00:02 67K 
[ ]CPTAC3-LSCC-v3beta.final_analysis_set.maf.mutation_profile_samples_97-108.ai2020-04-25 00:02 2.6M 
[ ]CPTAC3-LSCC-v3beta.final_analysis_set.maf.mutation_profile_samples_97-108.fig2020-04-25 00:02 80K 
[IMG]CPTAC3-LSCC-v3beta.final_analysis_set.maf.mutation_profile_samples_97-108.png2020-04-25 00:02 65K 
[TXT]CPTAC3-LSCC-v3beta.final_analysis_set.maf.mutation_spectrum.txt2020-04-25 00:03 90K 
[ ]CPTAC3-LSCC-v3beta_coMut.pdf2020-04-25 00:10 34K 
[IMG]CPTAC3-LSCC-v3beta_coMut.png2020-04-25 00:10 74K 
[IMG]CUL3.stick_fig.jpg2020-04-25 00:10 30K 
[ ]CUL3.stick_fig.pdf2020-04-25 00:10 4.0K 
[TXT]CUL3.stick_fig.txt2020-04-24 23:59 693  
[IMG]KEAP1.stick_fig.jpg2020-04-25 00:10 37K 
[ ]KEAP1.stick_fig.pdf2020-04-25 00:10 4.6K 
[TXT]KEAP1.stick_fig.txt2020-04-25 00:00 1.2K 
[IMG]KMT2D.stick_fig.jpg2020-04-25 00:10 72K 
[ ]KMT2D.stick_fig.pdf2020-04-25 00:10 5.7K 
[TXT]KMT2D.stick_fig.txt2020-04-24 23:58 2.6K 
[TXT]MutSig_version.txt2020-04-24 23:49 25  
[IMG]NF1.stick_fig.jpg2020-04-25 00:10 48K 
[ ]NF1.stick_fig.pdf2020-04-25 00:10 4.7K 
[TXT]NF1.stick_fig.txt2020-04-25 00:00 1.5K 
[IMG]NFE2L2.stick_fig.jpg2020-04-25 00:10 47K 
[ ]NFE2L2.stick_fig.pdf2020-04-25 00:10 4.5K 
[TXT]NFE2L2.stick_fig.txt2020-04-24 23:59 1.5K 
[IMG]PTEN.stick_fig.jpg2020-04-25 00:10 46K 
[ ]PTEN.stick_fig.pdf2020-04-25 00:10 4.3K 
[TXT]PTEN.stick_fig.txt2020-04-24 23:58 1.4K 
[IMG]SUZ12.stick_fig.jpg2020-04-25 00:10 23K 
[ ]SUZ12.stick_fig.pdf2020-04-25 00:10 3.5K 
[TXT]SUZ12.stick_fig.txt2020-04-25 00:00 419  
[IMG]TP53.stick_fig.jpg2020-04-25 00:10 137K 
[ ]TP53.stick_fig.pdf2020-04-25 00:10 11K 
[TXT]TP53.stick_fig.txt2020-04-24 23:58 9.1K 
[ ]dcc_archive.properties2020-04-25 00:10 1  
[TXT]dcc_archive_manifest.tsv2020-04-25 00:10 2.0K 
[TXT]discrepant_coding_effect_genes.txt2020-04-24 23:49 39  
[ ]gcs_delocalization.sh2020-04-25 00:10 1.7K 
[ ]gcs_localization.sh2020-04-24 23:57 3.1K 
[ ]gcs_transfer.sh2020-04-24 23:57 13K 
[TXT]generatedStickFigurePaths.txt2020-04-25 00:00 823  
[TXT]mutcateg_discovery.txt2020-04-24 23:42 1.5K 
[TXT]mutcategs.txt2020-04-25 00:10 638  
[ ]nozzle.RData2020-04-25 00:10 12K 
[TXT]nozzle.html2020-04-25 00:10 165K 
[TXT]params.txt2020-04-24 23:40 1.1K 
[TXT]patient_counts_and_rates.txt2020-04-25 00:10 19K 
[ ]results.mat2020-04-24 23:48 17M 
[TXT]sample_sig_gene_table.txt2020-04-24 23:49 4.4K 
[TXT]sample_sig_gene_table_orig.txt2020-04-24 23:48 5.1K 
[ ]script2020-04-24 23:57 5.8K 
[TXT]sig_genes.txt2020-04-25 00:10 42K 
[TXT]sig_genes_orig.txt2020-04-24 23:48 1.2M 
[TXT]stderr2020-04-24 23:58 0  
[TXT]stdout2020-04-25 00:00 20K