TumorType | Biospecimen | Any_Level_1 | Clinical | CNA | Methylation | mRNA | miR | MAF |
COAD | 245 | 202 | 208 | 186 | 167 | 155 | 0 | 88 |
Pipeline | Not Ready | Failed | Succeed | |
---|---|---|---|---|
1 | Aggregate_Clusters | 0 | 0 | 0 |
2 | Clinical_Aggregate_Tier1 | 0 | 0 | 1 |
3 | Clinical_Pick_Tier1 | 0 | 0 | 1 |
4 | CopyNumber_GeneBySample | 0 | 0 | 1 |
5 | CopyNumber_Gistic2 | 0 | 0 | 1 |
6 | CopyNumber_Preprocess | 0 | 0 | 1 |
7 | Correlate_Clinical_vs_miR | 1 | 0 | 0 |
8 | Correlate_Clinical_vs_Molecular_Signatures | 0 | 0 | 0 |
9 | Correlate_Clinical_vs_mRNA | 0 | 0 | 1 |
10 | Correlate_Clinical_vs_Mutation | 0 | 0 | 1 |
11 | Correlate_CopyNumber_vs_miR | 1 | 0 | 0 |
12 | Correlate_CopyNumber_vs_mRNA | 0 | 0 | 1 |
13 | Correlate_GenomicEvents | 0 | 0 | 1 |
14 | Correlate_Methylation_vs_mRNA | 0 | 0 | 1 |
15 | miR_Clustering_CNMF | 1 | 0 | 0 |
16 | miR_Clustering_Consensus | 1 | 0 | 0 |
17 | miR_FindDirectTargets | 1 | 0 | 0 |
18 | mRNA_Clustering_CNMF | 0 | 0 | 1 |
19 | mRNA_Clustering_Consensus | 0 | 0 | 1 |
20 | mRNA_Preprocess_Median | 0 | 0 | 1 |
21 | Mutation_Assessor | 0 | 0 | 1 |
22 | Mutation_Significance | 0 | 0 | 1 |
23 | Pathway_FindEnrichedGenes | 0 | 0 | 1 |
24 | Pathway_Paradigm | 0 | 0 | 1 |
Total | 5 | 0 | 17 |