Broad GDAC Analyses Status
prod__2012_01_24__gbm_00 Run for Tumor Type: GBM

TumorBCRClinicalCNMethylationmRNAmRNAseqmiRmiRseqMAF
GBM59654453728754204910276

Note that the links below require Broad internal Firehose login credentials.

PipelineNotRunnableRunnableInProcessSuccessfulUnsuccessful
1Aggregate_Clusters00010
2CopyNumber_GeneBySample00010
3CopyNumber_Gistic200010
4CopyNumber_Preprocess00010
5Correlate_CopyNumber_vs_miR00010
6Correlate_CopyNumber_vs_mRNA00010
7Correlate_Methylation_vs_mRNA00010
8Methylation_Clustering_CNMF00010
9Methylation_Preprocess00010
10miRseq_Clustering_CNMF10000
11miRseq_Clustering_Consensus10000
12miRseq_Preprocess10000
13miR_Clustering_CNMF00010
14miR_Clustering_Consensus00010
15miR_FindDirectTargets00010
16mRNAseq_Clustering_CNMF10000
17mRNAseq_Clustering_Consensus10000
18mRNAseq_Preprocess10000
19mRNA_Clustering_CNMF00010
20mRNA_Clustering_Consensus00010
21mRNA_Preprocess_Median00010
22Mutation_Assessor00010
23Mutation_Significance00010
24Pathway_FindEnrichedGenes00010
25Pathway_Paradigm_Expression00010
26Pathway_Paradigm_Expression_CopyNumber00010
27Pathway_Paradigm_Lite00010
Total600210

This table generated on Fri Feb 17 06:07:56 2012