Broad GDAC Analyses Status
prod__2012_01_24__lihc_00 Run for Tumor Type: LIHC

TumorBCRClinicalCNMethylationmRNAmRNAseqmiRmiRseqMAF
LIHC59425300170280

Note that the links below require Broad internal Firehose login credentials.

PipelineNotRunnableRunnableInProcessSuccessfulUnsuccessful
1Aggregate_Clusters01000
2CopyNumber_GeneBySample00010
3CopyNumber_Gistic200010
4CopyNumber_Preprocess00010
5Correlate_CopyNumber_vs_miR10000
6Correlate_CopyNumber_vs_mRNA10000
7Correlate_Methylation_vs_mRNA10000
8Methylation_Clustering_CNMF10000
9Methylation_Preprocess10000
10miRseq_Clustering_CNMF00010
11miRseq_Clustering_Consensus00010
12miRseq_Preprocess00010
13miR_Clustering_CNMF10000
14miR_Clustering_Consensus10000
15miR_FindDirectTargets10000
16mRNAseq_Clustering_CNMF00010
17mRNAseq_Clustering_Consensus00010
18mRNAseq_Preprocess00010
19mRNA_Clustering_CNMF10000
20mRNA_Clustering_Consensus10000
21mRNA_Preprocess_Median00001
22Mutation_Assessor10000
23Mutation_Significance10000
24Pathway_FindEnrichedGenes10000
25Pathway_Paradigm_Expression00001
26Pathway_Paradigm_Expression_CopyNumber00001
27Pathway_Paradigm_Lite10000
Total141093

This table generated on Fri Feb 17 06:07:57 2012