Broad GDAC Analyses Status
analyses__2012_02_17__brca_00 Run for Tumor Type: BRCA

TumorBCRClinicalCNMethylationmRNAmRNAseqmiRmiRseqMAF
BRCA8648447818085297510781507

Note that the links below require Broad internal Firehose login credentials.

PipelineNotRunnableRunnableInProcessSuccessfulUnsuccessful
1Aggregate_Clusters00010
2CopyNumber_GeneBySample00010
3CopyNumber_Gistic200010
4CopyNumber_Preprocess00010
5Correlate_CopyNumber_vs_miR10000
6Correlate_CopyNumber_vs_mRNA00010
7Correlate_Methylation_vs_mRNA00010
8Methylation_Clustering_CNMF00010
9Methylation_Preprocess00010
10miRseq_Clustering_CNMF00010
11miRseq_Clustering_Consensus00010
12miRseq_Preprocess00010
13miR_Clustering_CNMF10000
14miR_Clustering_Consensus10000
15miR_FindDirectTargets10000
16mRNAseq_Clustering_CNMF00010
17mRNAseq_Clustering_Consensus00010
18mRNAseq_Preprocess00010
19mRNA_Clustering_CNMF00010
20mRNA_Clustering_Consensus00010
21mRNA_Preprocess_Median00010
22Mutation_Assessor00010
23Mutation_Significance00010
24Pathway_FindEnrichedGenes00010
25Pathway_Paradigm_Expression00010
26Pathway_Paradigm_Expression_CopyNumber00010
27Pathway_Paradigm_Lite00010
Total400230

This table generated on Fri Apr 13 14:40:18 2012