Unique Name	Descriptor	Wide Peak Limits	Peak Limits	Region Limits	q values	Residual q values after removing segments shared with higher peaks	Broad or Focal	Amplitude Threshold	TCGA-CS-4938-01B-11D-1892-01	TCGA-CS-4941-01A-01D-1466-01	TCGA-CS-4942-01A-01D-1466-01	TCGA-CS-4943-01A-01D-1466-01	TCGA-CS-4944-01A-01D-1466-01	TCGA-CS-5390-01A-02D-1466-01	TCGA-CS-5393-01A-01D-1466-01	TCGA-CS-5394-01A-01D-1466-01	TCGA-CS-5395-01A-01D-1466-01	TCGA-CS-5396-01A-02D-1466-01	TCGA-CS-5397-01A-01D-1892-01	TCGA-CS-6188-01A-11D-1892-01	TCGA-CS-6290-01A-11D-1704-01	TCGA-CS-6665-01A-11D-1892-01	TCGA-CS-6666-01A-11D-1892-01	TCGA-CS-6668-01A-11D-1892-01	TCGA-CS-6669-01A-11D-1892-01	TCGA-CS-6670-01A-11D-1892-01	TCGA-DB-5270-01A-02D-1466-01	TCGA-DB-5273-01A-01D-1466-01	TCGA-DB-5274-01A-01D-1466-01	TCGA-DB-5275-01A-01D-1466-01	TCGA-DB-5276-01A-01D-1466-01	TCGA-DB-5277-01A-01D-1466-01	TCGA-DB-5278-01A-01D-1466-01	TCGA-DB-5279-01A-01D-1466-01	TCGA-DB-5280-01A-01D-1466-01	TCGA-DB-5281-01A-01D-1466-01	TCGA-DH-5140-01A-01D-1466-01	TCGA-DH-5141-01A-01D-1466-01	TCGA-DH-5142-01A-01D-1466-01	TCGA-DH-5143-01A-01D-1466-01	TCGA-DH-5144-01A-01D-1466-01	TCGA-DU-5847-01A-11D-1704-01	TCGA-DU-5849-01A-11D-1704-01	TCGA-DU-5851-01A-13D-1892-01	TCGA-DU-5852-01A-11D-1704-01	TCGA-DU-5853-01A-11D-1892-01	TCGA-DU-5854-01A-11D-1704-01	TCGA-DU-5855-01A-11D-1704-01	TCGA-DU-5870-01A-11D-1704-01	TCGA-DU-5871-01A-12D-1704-01	TCGA-DU-5872-01A-11D-1704-01	TCGA-DU-5874-01A-11D-1704-01	TCGA-DU-6392-01A-11D-1704-01	TCGA-DU-6393-01A-11D-1704-01	TCGA-DU-6394-01A-11D-1704-01	TCGA-DU-6395-01A-12D-1704-01	TCGA-DU-6396-01A-11D-1704-01	TCGA-DU-6397-01A-11D-1704-01	TCGA-DU-6399-01A-12D-1704-01	TCGA-DU-6400-01A-12D-1704-01	TCGA-DU-6401-01A-11D-1704-01	TCGA-DU-6402-01A-11D-1704-01	TCGA-DU-6403-01A-11D-1704-01	TCGA-DU-6404-01A-11D-1704-01	TCGA-DU-6405-01A-11D-1704-01	TCGA-DU-6406-01A-11D-1704-01	TCGA-DU-6407-01A-13D-1704-01	TCGA-DU-6408-01A-11D-1704-01	TCGA-DU-6410-01A-11D-1892-01	TCGA-DU-6542-01A-11D-1892-01	TCGA-E1-5302-01A-01D-1466-01	TCGA-E1-5303-01A-01D-1466-01	TCGA-E1-5304-01A-01D-1466-01	TCGA-E1-5305-01A-01D-1892-01	TCGA-E1-5307-01A-01D-1892-01	TCGA-E1-5311-01A-01D-1466-01	TCGA-E1-5318-01A-01D-1466-01	TCGA-E1-5319-01A-01D-1892-01	TCGA-E1-5322-01A-01D-1466-01	TCGA-FG-5962-01B-11D-1892-01	TCGA-FG-5963-01A-11D-1704-01	TCGA-FG-5964-01A-11D-1704-01	TCGA-FG-5965-01B-11D-1892-01	TCGA-FG-6688-01A-11D-1892-01	TCGA-FG-6689-01A-11D-1892-01	TCGA-FG-6690-01A-11D-1892-01	TCGA-FG-6691-01A-11D-1892-01	TCGA-FG-6692-01A-11D-1892-01	
Amplification Peak 1	1q32.1  	chr1:201977214-202897544(probes 99013:99659)  	chr1:202703144-202756250(probes 99488:99515)  	chr1:201932864-203054975(probes 98996:99774)  	2.462e-05	  2.462e-05		0: t<0.3; 1: 0.3<t< 0.9; 2: t>0.9	0	1	0	0	0	0	0	0	2	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	2	0	0	0	1	
Amplification Peak 2	4q12    	chr4:54050264-56186612(probes 406631:408266)    	chr4:55572587-55746184(probes 407937:408021)    	chr4:53712368-56188161(probes 406478:408268)    	0.037424	   0.037424		0: t<0.3; 1: 0.3<t< 0.9; 2: t>0.9	0	0	0	2	0	0	0	0	0	0	0	0	0	2	1	0	0	0	0	0	0	0	0	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	
Amplification Peak 3	7p11.2  	chr7:54910170-55074962(probes 721341:721457)    	chr7:54911576-55074689(probes 721342:721456)    	chr7:54036113-56368692(probes 720717:721918)    	5.3906e-21	 5.3906e-21		0: t<0.3; 1: 0.3<t< 0.9; 2: t>0.9	0	2	1	0	0	0	2	0	1	0	1	2	0	1	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	2	0	2	0	0	0	0	0	1	0	0	1	0	0	0	0	0	1	2	1	2	2	1	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	2	0	0	1	2	
Amplification Peak 4	12p13.32	chr12:4400387-4472821(probes 1089513:1089567)    	chr12:4400403-4471215(probes 1089514:1089566)    	chr12:548735-6872571(probes 1087099:1091341)      	0.0025135	  0.0025135		0: t<0.3; 1: 0.3<t< 0.9; 2: t>0.9	0	0	0	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	1	0	2	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	2	1	0	0	0	0	0	1	0	0	0	0	1	0	0	0	1	2	0	0	0	0	0	0	0	0	0	1	0	0	1	1	0	
Amplification Peak 5	12q14.1 	chr12:56370368-56546867(probes 1118360:1118397)	chr12:56370612-56546574(probes 1118361:1118396)	chr12:56370612-56561442(probes 1118361:1118405)	0.0031783	  0.0031783		0: t<0.3; 1: 0.3<t< 0.9; 2: t>0.9	0	2	0	0	0	0	0	0	0	0	0	0	0	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	2	0	0	0	0	0	0	0	0	0	0	0	0	0	2	0	0	0	0	0	0	0	0	0	0	0	
Deletion Peak  1	1p36.23 	chr1:1-28712888(probes 1:12734)                    	chr1:8325602-8804773(probes 2947:3166)            	chr1:8543683-8606872(probes 3036:3061)            	0.12196	    0.12196		0: t>-0.3; 1: -0.3>t> -1.3; 2: t< -1.3	0	0	0	0	0	1	0	1	0	1	0	0	0	0	0	1	0	1	0	0	1	1	0	0	1	1	0	0	0	1	0	0	1	0	1	0	1	0	0	0	1	0	1	1	0	1	1	0	0	1	0	1	0	1	0	0	1	0	0	0	1	0	0	0	0	0	0	1	1	1	0	1	0	1	0	0	0	0	0	1	
Deletion Peak  2	1q44    	chr1:235015260-247249719(probes 120529:128525)  	chr1:246215434-246272364(probes 128343:128374)	chr1:246217668-246228284(probes 128344:128345)	0.16964	    0.17801		0: t>-0.3; 1: -0.3>t> -1.3; 2: t< -1.3	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	1	0	0	0	0	0	0	0	0	1	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	
Deletion Peak  3	2p25.3  	chr2:1-9464621(probes 128526:135281)                   	chr2:27498-40426(probes 128537:128539)                	chr2:1-222932(probes 128526:128620)                   	0.055711	   0.055711		0: t>-0.3; 1: -0.3>t> -1.3; 2: t< -1.3	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	1	0	0	0	0	0	0	0	0	0	
Deletion Peak  4	2q37.3  	chr2:232493600-242951149(probes 258439:264001)  	chr2:238672807-238777841(probes 262329:262367)	chr2:232166409-242951149(probes 258329:264001)	0.0019765	  0.0019765		0: t>-0.3; 1: -0.3>t> -1.3; 2: t< -1.3	0	0	0	0	0	0	0	0	0	0	1	0	0	0	1	0	0	0	1	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	1	1	0	0	0	0	0	0	0	1	0	1	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	
Deletion Peak  5	3p21.1  	chr3:49545887-53099552(probes 294578:295684)      	chr3:51973809-52919124(probes 295352:295587)    	chr3:50877671-52925442(probes 294904:295590)    	0.02704	    0.02704		0: t>-0.3; 1: -0.3>t> -1.3; 2: t< -1.3	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	
Deletion Peak  6	4q35.1  	chr4:167012652-191273063(probes 469705:483960)  	chr4:183296391-184614846(probes 479666:480552)	chr4:167848029-191273063(probes 470134:483960)	0.0032038	  0.0032038		0: t>-0.3; 1: -0.3>t> -1.3; 2: t< -1.3	0	0	0	1	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	1	0	1	0	1	0	1	0	0	0	0	0	0	0	1	0	1	0	0	0	0	0	1	0	0	0	0	0	0	1	0	0	0	0	0	1	0	0	0	1	0	0	0	0	1	0	1	0	0	1	1	1	1	0	0	0	0	0	0	
Deletion Peak  7	5q35.2  	chr5:104437660-180857866(probes 541761:586808)  	chr5:174799148-174889072(probes 584767:584829)	chr5:174149418-174904551(probes 584245:584848)	0.14392	    0.14392		0: t>-0.3; 1: -0.3>t> -1.3; 2: t< -1.3	0	0	0	0	0	0	0	0	0	0	0	0	0	1	1	0	0	0	0	0	0	0	0	1	0	0	0	1	1	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	1	0	0	0	0	0	1	0	0	0	0	0	0	1	0	0	0	0	0	0	0	
Deletion Peak  8	6p24.1  	chr6:1-170899992(probes 586809:686882)             	chr6:13408348-13439075(probes 596838:596860)    	chr6:13211758-13446683(probes 596632:596867)    	0.22994	    0.22953		0: t>-0.3; 1: -0.3>t> -1.3; 2: t< -1.3	0	0	0	0	0	0	0	0	0	0	1	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	1	0	0	
Deletion Peak  9	9p23    	chr9:1-140273252(probes 855387:926614)             	chr9:8300705-10626053(probes 862228:863821)      	chr9:8489893-11722405(probes 862421:864259)      	0.014044	    0.25244		0: t>-0.3; 1: -0.3>t> -1.3; 2: t< -1.3	0	0	0	1	0	0	1	0	1	0	1	1	0	0	1	0	0	0	0	0	0	0	0	1	0	1	0	1	0	0	0	0	0	1	0	1	1	0	1	1	0	0	0	0	0	0	0	1	0	0	1	0	0	1	1	0	1	0	0	0	0	1	0	0	1	0	1	0	0	0	0	0	1	1	1	0	0	0	0	1	
Deletion Peak 10	9p21.3  	chr9:21981753-22438737(probes 871986:872300)      	chr9:21989616-22001391(probes 871992:872016)    	chr9:20000397-29415709(probes 870609:876734)    	2.6497e-22	 7.9106e-21		0: t>-0.3; 1: -0.3>t> -1.3; 2: t< -1.3	0	0	0	2	0	0	1	0	1	0	1	1	0	0	0	0	0	0	0	0	0	1	0	1	0	1	0	1	1	0	0	0	0	2	0	1	2	0	1	1	0	0	0	0	0	0	0	1	0	0	1	0	0	1	1	0	2	2	1	0	0	1	0	0	1	0	0	0	0	0	0	0	1	1	1	0	0	0	0	1	
Deletion Peak 11	10p12.1 	chr10:22746393-26919698(probes 942490:945316)    	chr10:25500746-25934218(probes 944328:944635)  	chr10:25751963-25755873(probes 944482:944483)  	0.13538	    0.13403		0: t>-0.3; 1: -0.3>t> -1.3; 2: t< -1.3	0	1	0	0	0	0	0	0	1	0	1	1	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	1	0	0	0	0	2	0	0	1	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	1	1	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	1	0	0	0	1	
Deletion Peak 12	10q23.1 	chr10:63621438-90529962(probes 963716:979674)    	chr10:83621756-84741571(probes 975056:975940)  	chr10:84130313-84134704(probes 975499:975500)  	0.1833	    0.17801		0: t>-0.3; 1: -0.3>t> -1.3; 2: t< -1.3	0	1	0	0	0	0	0	0	1	0	1	1	0	1	0	0	0	0	0	0	0	0	0	1	0	1	0	0	1	0	0	0	0	1	0	0	1	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	1	0	1	1	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	1	0	0	0	1	
Deletion Peak 13	11p15.4 	chr11:1-11941429(probes 1008360:1015025)           	chr11:5210376-5214275(probes 1010373:1010375)    	chr11:5210488-5225052(probes 1010374:1010393)    	0.067246	   0.073038		0: t>-0.3; 1: -0.3>t> -1.3; 2: t< -1.3	0	0	0	1	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	1	0	1	0	0	0	0	0	0	1	0	0	0	0	1	0	1	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	1	0	0	0	1	0	0	1	0	1	0	0	0	0	0	0	0	0	0	1	0	1	0	0	0	
Deletion Peak 14	14q23.2 	chr14:57939329-79751635(probes 1246355:1259773)  	chr14:63382815-63766141(probes 1249607:1249833)	chr14:62748676-79377945(probes 1249310:1259515)	0.025167	   0.073038		0: t>-0.3; 1: -0.3>t> -1.3; 2: t< -1.3	1	1	1	0	1	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	1	0	1	0	0	1	0	0	0	0	1	0	0	1	0	0	1	0	0	1	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	1	0	1	0	0	0	1	0	0	1	1	0	0	1	0	0	0	0	0	0	0	
Deletion Peak 15	14q32.12	chr14:68406386-106368585(probes 1252582:1271382)	chr14:90990272-95129679(probes 1266572:1266593)	chr14:89207243-95895863(probes 1265545:1267217)	0.028444	   0.055711		0: t>-0.3; 1: -0.3>t> -1.3; 2: t< -1.3	1	1	1	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	1	0	0	1	0	0	0	0	1	0	0	1	0	0	1	0	0	1	0	0	0	0	0	1	0	0	0	0	0	1	0	0	0	0	0	0	1	0	0	1	1	0	0	0	0	0	0	1	0	0	0	0	0	0	0	
Deletion Peak 16	18q23   	chr18:75847612-76117153(probes 1445702:1445768)  	chr18:75892205-76117153(probes 1445723:1445768)	chr18:75867859-76117153(probes 1445713:1445768)	0.020502	   0.020502		0: t>-0.3; 1: -0.3>t> -1.3; 2: t< -1.3	0	0	0	0	0	0	0	0	0	1	0	0	0	1	0	0	0	0	0	0	0	1	0	0	0	1	0	0	1	0	0	0	0	0	1	0	0	0	1	0	1	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	
Deletion Peak 17	19q13.42	chr19:21055359-63811651(probes 1453278:1469869)  	chr19:59228417-62061513(probes 1467567:1468950)	chr19:49185477-63811651(probes 1463056:1469869)	0.0019765	  0.0019765		0: t>-0.3; 1: -0.3>t> -1.3; 2: t< -1.3	0	0	1	0	1	1	0	1	0	1	0	0	1	0	1	1	0	1	1	1	1	1	0	1	1	1	0	0	0	1	1	0	1	0	1	0	0	0	0	0	1	0	1	1	0	1	1	0	1	1	1	1	0	0	0	0	0	0	0	1	1	1	1	0	0	1	0	1	1	1	1	1	0	1	1	0	0	1	0	0	
Deletion Peak 18	22q13.31	chr22:42722705-49691432(probes 1540641:1542146)  	chr22:42925543-43119330(probes 1540821:1540878)	chr22:40458408-49691432(probes 1539414:1542146)	0.0066855	  0.0066855		0: t>-0.3; 1: -0.3>t> -1.3; 2: t< -1.3	0	0	0	1	0	0	1	0	0	0	1	0	0	0	0	0	0	0	0	1	0	0	0	1	0	0	0	0	0	0	0	0	0	1	0	0	1	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	1	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	
Amplification Peak 1 - CN values	1q32.1  	chr1:201977214-202897544(probes 99013:99659)  	chr1:202703144-202756250(probes 99488:99515)  	chr1:201932864-203054975(probes 98996:99774)  	2.462e-05	  2.462e-05		Actual Copy Change Given	-0.010507	0.43221	0.0051359	-0.015191	0.0038854	0.0095883	-0.024661	-0.013127	6	0	0.53503	0.0052749	0.021595	0.2904	0.056228	-0.0053992	0.020623	0.010564	-0.0025473	-0.033132	0.09333	-0.0042929	-0.010094	0.10468	0.0027745	-0.01354	0.015587	-0.01106	0.029859	-0.0079982	0.017684	-0.013264	0.0079175	0.0072217	0.014749	0.037782	0.0013868	0.0066653	0.0065262	0.016565	0.010345	-0.27709	0.017069	0.0076392	0.33124	0.0090312	-0.011887	-0.01964	-0.20883	0.004719	0.013911	0.077142	0.004719	-0.0045695	5.5562	-0.02022	0.0048579	-0.038817	0.0029133	0.027076	-0.00013862	0.010424	-0.37347	0.0033299	-0.15962	-0.00041585	0.0033299	0.0077783	0.045566	-0.015191	-0.2061	0.23686	0.021739	0.00083195	0.010424	5.7618	-0.011887	-0.0060904	-0.0096806	0.68198	
Amplification Peak 2 - CN values	4q12    	chr4:54050264-56186612(probes 406631:408266)    	chr4:55572587-55746184(probes 407937:408021)    	chr4:53712368-56188161(probes 406478:408268)    	0.037424	   0.037424		Actual Copy Change Given	0.020623	0.0049483	-0.027808	3.9406	-0.021235	-0.027124	0.028481	-0.00069303	0.0033299	0.010842	-0.01037	-0.012162	-0.034056	6	0.75815	-0.0051227	-0.017391	-0.0084385	0.018663	0.018943	-0.29573	-0.8292	-0.0012848	0.93752	-0.011887	-0.43539	-0.010646	-0.0012473	-0.04078	0.0056919	-0.0099565	0.0026357	-0.063301	0.030169	0.015587	-0.052126	-0.0077482	-0.018765	0	-0.054016	0.0090916	0.037007	-0.010664	-0.0070576	-0.017529	-0.021373	0.018663	-0.010508	0.054376	0.0081959	-0.1281	-0.18005	-0.007472	0.0063871	0.004719	0.013353	-0.0088526	0.034113	0.024689	-0.034359	-0.27719	0.021884	-0.083101	-0.047936	0.2369	0.0043021	0.086666	-0.35988	-0.026304	0.010424	-0.024524	-0.45631	0.053944	-0.53053	0.001803	-0.022744	0.015866	0.0019418	0.0021078	0.017824	
Amplification Peak 3 - CN values	7p11.2  	chr7:54910170-55074962(probes 721341:721457)    	chr7:54911576-55074689(probes 721342:721456)    	chr7:54036113-56368692(probes 720717:721918)    	5.3906e-21	 5.3906e-21		Actual Copy Change Given	-0.0048461	6	0.67456	0.018383	-0.011611	0.061508	1.7772	-0.0056757	0.86195	0.1679	0.5539	6	-0.012989	0.3017	0.069669	-0.00097017	0.022304	-0.041159	0.51909	0.017963	0.032422	0.0351	0.0013868	0.096961	-0.0066432	0.0069866	-0.0060904	-0.00069303	-0.019891	0.0011093	0.14637	0.039761	0.029888	-0.020687	-0.0036011	-0.017666	6	0.0050829	6	-0.020001	0.0086738	-0.013745	-0.010508	-0.00027724	0.72206	0.0011093	0.0065262	0.73948	-0.033814	-0.014641	0.035806	0.069382	0.011261	0.53257	6	0.47049	6	6	0.76293	0.0043021	0.8163	0.041458	0.013074	0.021884	0.28851	-0.0019399	0.0091705	0.0024969	0.0098669	0.0036076	0.0070826	0.20698	0.032699	-0.0099565	0.1076	6	0.017684	0.028622	0.65535	6	
Amplification Peak 4 - CN values	12p13.32	chr12:4400387-4472821(probes 1089513:1089567)    	chr12:4400403-4471215(probes 1089514:1089566)    	chr12:548735-6872571(probes 1087099:1091341)      	0.0025135	  0.0025135		Actual Copy Change Given	0.058081	-0.019774	0.1283	5.457	-0.0027707	0.012097	0.097979	-0.013402	0.00069327	-0.0056757	0.0030522	0.015587	0.089561	-0.46334	-0.006505	-0.0070576	0.045566	0.00597	0.020203	0.88486	-0.017666	0.7951	-0.012851	1.62	0.013074	-0.42887	0.012237	0.32237	0.055059	-0.0071958	0.01433	0.00597	0.0084743	-0.024388	-0.020001	0.073115	0.019923	0.015727	0.035242	0.054233	0.0082562	0.17114	0.043723	-0.014641	0.015168	0	-0.018765	1.2461	0.57451	-0.010232	0.19786	0.069095	0.05694	-0.0060904	0.46447	0.0030522	0.0023581	-0.042924	-0.022744	0.74556	-0.012851	-0.12953	0.046842	0.53169	3.596	-0.019726	0.015587	0.033408	0.0068044	-0.0026322	0.037641	-0.046485	0.023561	-0.025483	0.4894	0.041741	-0.007472	0.36444	0.69484	-0.0079176	
Amplification Peak 5 - CN values	12q14.1 	chr12:56370368-56546867(probes 1118360:1118397)	chr12:56370612-56546574(probes 1118361:1118396)	chr12:56370612-56561442(probes 1118361:1118405)	0.0031783	  0.0031783		Actual Copy Change Given	0.0019418	6	0.0026357	0.031014	0.00497	0.0049969	-0.0037395	0.0012481	-0.0037395	0.0081959	0.0052749	-0.0034627	-0.040391	1.7082	0.0040243	0	-0.0085766	0.012655	-0.0091286	-0.058058	0.010703	-0.24982	0.008892	-0.32379	-0.0081624	-0.43973	0.010564	0.0033299	0.013045	0.00013863	-0.093006	-0.025893	-0.0034931	0.048972	0.0090312	0.0072758	0.0016642	-0.11991	0.0041632	0.013772	0.026295	-0.22705	0.003191	0.010703	-0.0042929	0.008892	0.015308	0.0037465	0.011539	0.013074	-0.066252	0.10567	-0.38884	0.00083195	3.7825	0.019503	0.013632	0.010703	0.0065262	0.0093098	0.0077783	-0.22416	-0.22871	0.012795	-0.1907	0.12108	0.0062481	0.0049675	1.5006	0.0030522	0.013632	-0.033442	0.012232	0.026654	0.031436	0.0090312	-0.54169	-0.14454	-0.0027707	0.017264	
Deletion Peak  1 - CN values	1p36.23 	chr1:1-28712888(probes 1:12734)                    	chr1:8325602-8804773(probes 2947:3166)            	chr1:8543683-8606872(probes 3036:3061)            	0.12196	    0.12196		Actual Copy Change Given	-0.028628	0.3881	0.041684	-0.038306	0.016006	-0.77431	-0.036401	-0.86341	-0.0062286	-0.86224	0.017684	0.0080567	0.0043021	0.23985	-0.041024	-0.92585	0.072253	-0.6916	-0.040752	-0.022195	-0.78782	-0.73284	-0.016704	-0.010508	-0.7183	-0.90052	0.021463	-0.0018014	0.08548	-0.78007	0.030873	0.011121	-0.90874	-0.028491	-0.65715	0.03454	-0.4381	0.0055529	0.062937	0.015447	-0.73128	-0.11541	-0.35339	-0.8341	0.065942	-0.85567	-0.84339	0.001803	-0.19124	-0.72859	0.0049969	-0.81483	0.065799	-0.44286	0.032986	0.0034687	-1.1191	-0.094724	-0.018216	0.0079175	-0.89435	-0.0063668	0.016705	0.023987	0.30058	-0.077878	-0.050776	-0.68815	-0.83122	-0.65855	-0.058731	-0.64877	0.025526	-0.56704	-0.016704	0.041458	-0.024661	0.0086135	-0.022701	-0.79928	
Deletion Peak  2 - CN values	1q44    	chr1:235015260-247249719(probes 120529:128525)  	chr1:246215434-246272364(probes 128343:128374)	chr1:246217668-246228284(probes 128344:128345)	0.16964	    0.17801		Actual Copy Change Given	-0.00097017	0.44336	0.0051359	-0.82301	0.007549	0.0095883	-0.024251	-0.009727	-0.011022	-0.0013858	0.0075	0.010703	0.015866	0.30969	0.044999	-0.00041585	0.0060421	0.010564	0.015308	-0.016704	0.084643	0.0073609	0.0011093	0.69859	0.010146	-0.0073339	-0.017116	-0.01106	0.029859	0.0034687	0.018523	-0.0066432	-0.0008316	0	0.0065262	0.022148	0.0066653	-0.0085766	0.010006	0.016565	-0.00049439	-0.28031	0.0086135	-0.014916	0.28382	-0.032723	0.0016642	-0.091816	-0.30039	-0.007472	-0.029994	0.080745	-0.7738	-0.0045695	-0.0023553	-0.0066432	0.0023581	-0.019726	-0.0042929	0.00597	-0.00069303	-0.687	-0.37347	0.0033299	1.3145	-0.0024774	0.0054139	0.0098669	0.042166	-0.015741	-0.20821	0.24883	-0.011478	0.00083195	0.0058309	0.0068044	-0.041838	-0.0060904	-0.028901	-0.0063668	
Deletion Peak  3 - CN values	2p25.3  	chr2:1-9464621(probes 128526:135281)                   	chr2:27498-40426(probes 128537:128539)                	chr2:1-222932(probes 128526:128620)                   	0.055711	   0.055711		Actual Copy Change Given	-0.007472	-0.026215	0.0084743	-0.17021	0.0079175	0.01447	-0.063569	-0.0037395	0.068808	-0.029857	0.010285	0.0011093	0.028622	-0.076678	-0.16752	-0.016567	0.040468	0.0095883	-0.026167	-0.0044312	0.28074	-0.048272	-0.43366	-1.5	0.0069435	0.014051	-0.0089906	-0.039258	0.089821	-0.0026322	0.060222	0.0037465	0.012516	-0.019433	-0.016979	0.034818	-0.026167	0.020063	-0.018765	0.0023581	-0.0036795	-0.36561	-0.0024938	0.0072217	-0.0022168	0.0033299	-0.012024	-0.0091286	-0.31674	-0.012713	-0.0084385	0.079015	-0.09142	-0.01354	-0.0091286	-0.078677	0	-0.10421	0.68079	-0.018353	-0.019726	-0.034359	-0.12655	-0.00055444	1.387	-0.005261	-0.61815	0.031155	0.003191	-0.018	-0.77082	-0.0044691	0.010838	-0.00055444	-0.017529	0.010564	0.068952	-0.0023553	-0.041567	-0.042245	
Deletion Peak  4 - CN values	2q37.3  	chr2:232493600-242951149(probes 258439:264001)  	chr2:238672807-238777841(probes 262329:262367)	chr2:232166409-242951149(probes 258329:264001)	0.0019765	  0.0019765		Actual Copy Change Given	-0.0099565	-0.01895	0.010842	-0.024661	0.007853	0	-0.041974	0.00041593	0.064082	-0.016292	-0.5849	0.017264	0.02806	-0.043059	-0.92092	0.0023581	0.044574	0.017963	-0.44652	0.0072217	0.25277	-0.0069195	0.004719	-0.34044	0.029747	0.0075	0.021603	-0.0123	0.076969	-0.0029518	-0.25503	-0.0049844	0.013772	-0.012512	-0.013063	0.021463	0.015168	0.0016642	0.0019418	-0.66864	-0.0011872	-0.039052	0.0063219	-0.0022559	0.010146	0.006109	-0.060092	-0.79983	-0.71479	-0.0033243	-0.045964	0.060508	0.048546	-0.026304	-0.0034627	-0.014916	-0.81729	-0.022881	-0.79686	-0.25515	-0.017254	-0.22256	-0.0015243	-0.0013858	-0.34847	0.012237	-0.053476	0.040044	0.016845	-0.015191	0.015447	0.0050978	0	-0.0024938	-0.012989	0.021323	-0.012024	-0.024388	-0.041295	-0.0081624	
Deletion Peak  5 - CN values	3p21.1  	chr3:49545887-53099552(probes 294578:295684)      	chr3:51973809-52919124(probes 295352:295587)    	chr3:50877671-52925442(probes 294904:295590)    	0.02704	    0.02704		Actual Copy Change Given	-0.0069195	-0.0029575	0.010564	-0.01354	-0.012162	-0.0011087	0.0023581	-0.0023553	0.011958	-0.0078863	-0.0080244	-0.010922	-0.00069303	-0.041024	-0.1316	0.80286	0.0054139	-0.0092024	0.0087528	-0.0011087	0.0087528	-0.69042	-0.0016629	-0.78749	0.0065262	0.012097	0.0038854	0.0022193	0.0041348	-0.00027724	0.00083195	0.0073609	0.014105	-0.0026322	0.0026357	0.0068044	0.0080567	-0.018078	0.076135	-0.068529	0.0095274	0.0653	0.00041593	-0.0047079	0.033549	-0.0083005	-0.026304	0.040751	-0.98417	-0.00069303	0.034254	0.087969	0.26624	-0.57328	-0.0027707	-0.016704	-0.0158	-0.0036011	0.016286	-0.017116	0.0027745	-0.23594	-0.011611	-0.0012473	-0.74011	0.0063871	-0.090493	-0.0055375	-0.017116	-0.011611	-0.97708	0.26477	0.058647	-0.017666	0.012795	0.021043	0.0068044	0	-0.0013858	-0.01106	
Deletion Peak  6 - CN values	4q35.1  	chr4:167012652-191273063(probes 469705:483960)  	chr4:183296391-184614846(probes 479666:480552)	chr4:167848029-191273063(probes 470134:483960)	0.0032038	  0.0032038		Actual Copy Change Given	-0.0012473	0.0052263	-0.036495	-0.90458	-0.018628	-0.092213	0.023987	-0.00013862	-0.022332	0.00083195	-0.015191	0.82294	-0.079343	-0.049019	-1.2763	0.003191	-0.034223	-0.0037395	-0.089037	0.023005	-0.29933	-0.69712	-0.025072	-1.0864	-0.0085766	-0.43778	-0.098682	-0.47247	-0.026195	0.00013863	-0.016017	-0.0049844	-0.075745	0.028903	0.014888	-0.41311	-0.013127	-0.33653	-0.016979	-0.052396	0.0035289	-0.23429	-0.029311	-0.73372	-0.028491	-0.016429	0.016146	-0.0099565	-0.0018014	0.0098669	-0.32396	-0.22158	-0.1595	0.00083195	-0.0051227	0.0075174	-0.77566	0.0056919	-0.060883	-0.051181	-0.90661	-0.007472	-0.11182	-0.026304	-0.22318	-0.35362	-0.136	-0.35971	-0.028081	-0.006505	-0.79536	-0.46581	-0.34871	-0.53956	-0.032723	-0.0501	-0.005261	-0.039665	-0.012162	0.010285	
Deletion Peak  7 - CN values	5q35.2  	chr5:104437660-180857866(probes 541761:586808)  	chr5:174799148-174889072(probes 584767:584829)	chr5:174149418-174904551(probes 584245:584848)	0.14392	    0.14392		Actual Copy Change Given	-0.00064667	-0.00018707	-0.0066432	-0.0074135	-0.010784	0	-0.046167	-0.011887	-0.012438	-0.0088526	-0.01037	-0.015604	-0.0027707	-0.47438	-0.51135	-0.0089246	-0.0099565	-0.0067813	-0.036265	-0.0078863	-0.0073339	-0.0091462	-0.17284	-0.82383	0	0.018243	-0.11495	-0.37966	-0.45031	-0.0060904	-0.024661	-0.068797	-0.032178	-0.036401	-0.0088526	-0.0063668	-0.82007	-0.011113	0.0068044	-0.052801	-0.0017414	-0.013194	0.02511	-0.026988	0	-0.0020784	-0.014641	-0.0044312	-0.01302	0.022304	-0.11795	-0.051586	-0.37909	-0.087712	0	-0.014366	-0.026167	-0.01904	-0.043195	-0.32135	0.0019418	-0.025072	-0.13971	-0.016841	-0.21676	-0.73466	-0.29865	-0.0077482	-0.0096806	-0.048766	-0.025209	-0.087284	-0.3348	-0.034344	-0.016154	0.031577	0.0041927	0.010424	-0.036538	-0.0053992	
Deletion Peak  8 - CN values	6p24.1  	chr6:1-170899992(probes 586809:686882)             	chr6:13408348-13439075(probes 596838:596860)    	chr6:13211758-13446683(probes 596632:596867)    	0.22994	    0.22953		Actual Copy Change Given	-0.010508	-0.0083487	0.6926	-0.023429	-0.0073339	0.0022193	-0.017803	-0.0047079	-0.0011087	-0.0029091	-0.47363	-0.61316	-0.034904	0.40177	-0.15848	0.00083195	0.0037465	0.0012481	-0.019177	-0.010922	-0.010508	-0.0071958	-0.015466	-0.17056	0.00027728	0.019643	-0.011473	0.0091705	0.022976	0.0046073	0	0.00097064	-0.028901	-0.077882	-0.010508	-0.0040162	0.0058947	-0.0832	0.00027728	-0.020549	0.0015856	-0.060007	0.0019418	-0.02151	-0.0023553	0.0066653	-0.0080244	-0.010784	-0.02384	-0.0045695	0.0025691	-0.18282	0.032422	-0.61345	-0.0041546	-0.017529	-0.021921	-0.0067813	-0.74124	0.25636	0.0091705	0.22022	0.011818	-0.018902	-0.19024	-0.0089906	-0.022332	-0.013677	-0.018628	-0.01849	-0.060614	-0.02374	-0.39384	-0.018628	-0.0017376	0.00027728	-0.0166	-0.5428	-0.015604	-0.0089906	
Deletion Peak  9 - CN values	9p23    	chr9:1-140273252(probes 855387:926614)             	chr9:8300705-10626053(probes 862228:863821)      	chr9:8489893-11722405(probes 862421:864259)      	0.014044	    0.25244		Actual Copy Change Given	-0.0051227	0.0051164	-0.048342	-0.86003	0.0055529	-0.020138	-0.49767	0.0098669	-0.79218	-0.17373	-0.57802	-1.237	0.022304	0.35137	-0.34916	-0.0011087	-0.0076101	-0.26637	-0.029721	0.015168	0.017824	-0.051181	0.0040243	-0.82171	0.0026357	-0.43572	0.0033299	-0.80823	0.054204	0.0093098	0.031155	0.0069435	-0.0029091	-0.62026	0.00041593	-0.3424	-0.80384	0.0030522	-0.50152	-0.63803	-0.016232	0.23956	-0.030158	0.0011093	-0.011198	-0.025483	0.0114	-0.57802	0.034395	-0.18641	-0.44415	-0.010784	-0.11861	-0.58618	-0.60613	0.0071365	-0.72433	0.016146	0.0054139	0.024689	0.011261	-0.33779	0.019083	-0.034495	-1.2354	-0.20143	-0.67122	0.0026357	0.0013868	0.0056919	-0.018628	-0.010822	-0.35624	-0.52143	-0.66744	-0.0080244	-0.010508	-0.15157	0.0033299	-0.76715	
Deletion Peak 10 - CN values	9p21.3  	chr9:21981753-22438737(probes 871986:872300)      	chr9:21989616-22001391(probes 871992:872016)    	chr9:20000397-29415709(probes 870609:876734)    	2.6497e-22	 7.9106e-21		Actual Copy Change Given	-0.00055444	0.0075905	-0.026441	-1.5	0.0055529	0.00088452	-0.49767	0.0098669	-1.274	-0.17373	-1.1826	-1.244	0.022304	0.35137	-0.29497	-0.0011087	-0.044685	-0.26637	-0.029721	0.015168	0.017824	-0.7117	0.0040243	-0.81379	0.0026357	-0.45233	0.0033299	-0.80823	-0.73417	0.0022193	-0.020687	0.0069435	-0.0029091	-1.3623	-0.028081	-0.3424	-1.5	0.0030522	-0.97153	-0.63803	-0.011864	0.23001	-0.01409	0.0011093	-0.011198	-0.035312	0.0050205	-0.54714	0.034395	-0.18641	-0.44415	-0.010784	-0.11861	-1.165	-0.60613	0.015447	-1.5	-1.5	-0.68351	0.024689	0.011261	-0.33779	0.019083	-0.034495	-1.1904	-0.20143	-0.23594	0.0026357	0.0013868	0.0095883	-0.018628	-0.010822	-0.74011	-0.48071	-0.9991	-0.0033243	-0.010508	-0.14618	0.0033299	-0.75409	
Deletion Peak 11 - CN values	10p12.1 	chr10:22746393-26919698(probes 942490:945316)    	chr10:25500746-25934218(probes 944328:944635)  	chr10:25751963-25755873(probes 944482:944483)  	0.13538	    0.13403		Actual Copy Change Given	-0.0069195	-0.56926	0.0051359	0.051672	-0.011887	0.0079175	0.051814	0.0020805	-0.78015	-0.092874	-0.57713	-0.60177	-0.01808	0.32237	0.081322	0.0027745	-0.0011087	0.010842	0.036088	0.26373	-0.090229	0.16505	0.027778	1.0746	-0.0096806	-0.43322	-0.0063668	0.074121	-0.31274	0	0.037217	0.021884	-0.0076101	-1.4181	-0.01409	0.0043021	-0.77634	-0.0018014	-0.48117	0.049653	-0.0052011	0.2317	-0.019314	-0.0080244	-0.017391	-0.0096806	0.0054139	-0.007472	0.5935	-0.0059522	0.0038854	-0.031086	0.016845	-0.58912	-0.080275	-0.0048461	-0.75028	-0.86657	-0.016429	-0.0094267	-0.0011997	-0.014503	0.097106	0.021323	0.38965	-0.0062286	0.0098669	-0.32704	0.0037465	-0.01438	0.73986	-0.037663	-0.023707	-0.019863	0.0030574	-0.34043	-0.0066432	0.00097064	0.048262	-0.77753	
Deletion Peak 12 - CN values	10q23.1 	chr10:63621438-90529962(probes 963716:979674)    	chr10:83621756-84741571(probes 975056:975940)  	chr10:84130313-84134704(probes 975499:975500)  	0.1833	    0.17801		Actual Copy Change Given	-0.0091286	-0.56384	0.0029133	0.0083351	0	-0.0011087	-0.079875	0.0098669	-0.78959	-0.086253	-0.57279	-0.59517	0.015739	-0.47353	0.039478	0.0012481	0.023005	0.012097	-0.0051227	0.0097276	-0.09089	-0.0020682	-0.015329	-0.80144	0.0043021	-0.43669	0.016286	0.0072217	-0.58492	-0.0044312	0.013632	0.0077783	0.010285	-0.66096	-0.012851	0.035806	-0.7768	-0.04048	-0.48197	-0.038578	0.0049809	0.0013191	-0.0077969	-0.0024938	-0.0024938	0.00041593	0.0066653	-0.0060904	-0.29414	-0.0042122	-0.17436	-0.024661	-0.24204	-0.58127	-0.59585	-0.017666	-0.73608	-0.87782	-0.005814	0.026935	-0.0080244	-0.049695	0.016425	0	-0.122	0.0095883	0.0030522	-0.31424	0.0043967	0.00027728	0.022024	-0.038207	0.0087481	-0.005261	-0.0023553	-0.34538	0.031295	0.0098669	-0.00041585	-0.76723	
Deletion Peak 13 - CN values	11p15.4 	chr11:1-11941429(probes 1008360:1015025)           	chr11:5210376-5214275(probes 1010373:1010375)    	chr11:5210488-5225052(probes 1010374:1010393)    	0.067246	   0.073038		Actual Copy Change Given	-0.049634	-0.017852	0.045424	-0.80269	0.015727	-0.041431	-0.021235	-0.035448	0.015447	0.76274	0.008892	0.0097276	-0.091182	-0.42887	0.40794	0.034818	-0.0085766	0.017124	-0.0063668	-0.093931	-0.016017	-0.85551	-0.011611	-0.84675	0.020623	0.03031	-0.021098	0.018663	-0.24985	-0.011887	-0.69051	0.012795	0.11712	-0.0087146	-0.018628	-0.33133	-0.016429	-0.59536	-0.0013858	-0.027945	-0.007274	-0.13607	0.028763	-0.034631	0.19238	0.66697	0.039619	0.00083195	-0.65519	0.61879	-0.0070576	0.095653	-0.0038779	-0.027535	0.0044411	-1.0344	0.0055529	-0.029857	-0.04726	-0.7324	0.020483	-0.013127	-0.74037	-0.02151	-0.63661	0.004719	-0.10854	0.033267	0.067948	0.032704	0.019083	0.26321	-0.048888	0.010842	-0.66096	0.040326	-0.36102	-0.086386	-0.028628	0.018943	
Deletion Peak 14 - CN values	14q23.2 	chr14:57939329-79751635(probes 1246355:1259773)  	chr14:63382815-63766141(probes 1249607:1249833)	chr14:62748676-79377945(probes 1249310:1259515)	0.025167	   0.073038		Actual Copy Change Given	-0.67104	-0.5598	-0.69676	0.068235	-0.65062	0.0026357	0.013492	0.0041028	0.010432	0.0022193	0.0052749	0.010424	0.012523	0.3033	0.013213	-0.85559	-0.0023553	-0.0027707	0.0013902	0.013632	-0.00097017	0.02525	-0.0020784	-0.71093	0.0023581	-0.43453	0.025531	0.015447	-0.7535	-0.00055444	-0.29307	-0.18949	0.0068044	-0.64893	-0.0012473	-0.15503	-0.62941	0.0065262	0.0051359	-0.45479	0.0036809	-0.059795	-0.81925	0.0076392	0.003191	0.0054139	0.00055459	-0.050235	-0.63689	-0.17879	-0.16536	0.083342	-0.047936	0.0048579	0.012934	0.010062	0.026935	0.030591	0.01433	-0.7295	-0.00027724	-0.7188	0.034818	-0.07401	-0.16192	-0.72225	-0.244	0.011121	-0.78572	-0.64921	-0.16908	0.0053758	-0.37121	-0.011122	0.012376	0.0037465	-0.026315	0.0027664	0.0036076	0.015866	
Deletion Peak 15 - CN values	14q32.12	chr14:68406386-106368585(probes 1252582:1271382)	chr14:90990272-95129679(probes 1266572:1266593)	chr14:89207243-95895863(probes 1265545:1267217)	0.028444	   0.055711		Actual Copy Change Given	-0.76012	-0.58837	-0.70396	-0.0089906	0.0027745	-0.00055444	-0.018902	-0.0096806	-0.0076101	-0.00052111	0.0052749	0.0036076	0.023426	0.28453	-0.027671	-0.87558	0.018103	-0.0027707	0.0013902	-0.020275	-0.013127	-0.0046619	0.019923	0.095508	0.015168	-0.43724	0.00097064	0.014888	-0.7535	-0.017666	-0.2978	-0.18534	0.019503	-0.68597	0.0030522	-0.15503	-0.6549	0.0041632	0.0029133	-0.44027	0.0063083	-0.063635	-0.84603	0.0093098	0.003191	0.011261	-0.024661	-0.065716	-0.60854	-0.17879	-0.16536	0.066945	-0.0038779	0.0048579	-0.61115	-0.022382	0.0037465	-0.051586	0.089851	-0.044415	-0.0088526	-0.7188	0.018243	0.021183	-1.2212	-0.74812	-0.17069	0.025812	0.00054998	-0.027261	-0.20137	-0.002947	-0.37584	0.014749	-0.0067813	-0.032723	-0.026315	0.0027664	-0.029857	0.0012481	
Deletion Peak 16 - CN values	18q23   	chr18:75847612-76117153(probes 1445702:1445768)  	chr18:75892205-76117153(probes 1445723:1445768)	chr18:75867859-76117153(probes 1445713:1445768)	0.020502	   0.020502		Actual Copy Change Given	-0.0070576	0.011351	-0.0055375	0.028622	0.0023581	-0.0096806	-0.13083	-0.00027724	-0.014641	-0.83938	-0.0051227	0	0.038489	-0.52358	-0.039122	-0.00097017	0.0083351	0.025305	0.0062481	0	-0.11482	-0.71453	-0.058058	0.10191	-0.0023553	-0.89724	-0.052801	-0.15324	-0.72192	-0.0073339	-0.10539	-0.011749	-0.035857	0.025671	-0.41882	-0.022195	-0.025863	0.0076392	-0.51001	0.001803	-0.76634	-0.049625	-0.055634	0.0084743	-0.0081624	-0.71399	-0.0036011	0.64928	0.047552	-0.035585	-0.051586	-0.068931	-0.01106	-0.0099565	-0.0037395	-0.0123	0.017264	-0.013264	-0.91244	-0.11195	-0.0022168	-0.019452	-0.0081624	0.006109	0.1795	-0.023292	-0.9035	0.0095883	0.00013863	-0.033814	-0.010646	-0.055671	-0.0029137	0.0069435	-0.011611	-0.019177	-0.010834	-0.051316	-0.060152	-0.02158	
Deletion Peak 17 - CN values	19q13.42	chr19:21055359-63811651(probes 1453278:1469869)  	chr19:59228417-62061513(probes 1467567:1468950)	chr19:49185477-63811651(probes 1463056:1469869)	0.0019765	  0.0019765		Actual Copy Change Given	-0.014778	-0.022654	-0.69124	-0.14952	-0.64593	-0.75418	-0.023018	-0.86232	0.77022	-0.83114	0.12756	-0.0048461	-0.60312	-0.069466	-0.76706	-0.86011	0.053806	-0.67426	-0.43192	-0.64912	-0.77702	-0.34159	-0.0036011	-0.30792	-0.70774	-0.88008	0.058509	0.0029133	-0.0066714	-0.76531	-0.71158	-0.0029091	-0.90972	-0.011749	-0.61383	-0.13669	0.058509	-0.11521	0.57398	-0.09446	-0.74112	-0.0083678	-0.7981	-0.82244	0.026233	-0.83163	-0.90858	-0.027261	-0.62941	-0.72712	-0.42265	-0.79227	0.082909	0.026935	0.041264	0.00083195	-0.014366	0.75757	-0.0066392	-0.85805	-0.89135	-0.74464	-0.76132	-0.059807	-0.12525	-0.78277	-0.018902	-0.70343	-0.82798	-0.64818	-0.73722	-0.63361	-0.0073385	-0.56565	-0.6277	0.040326	-0.013953	-0.37414	-0.032996	0.65719	
Deletion Peak 18 - CN values	22q13.31	chr22:42722705-49691432(probes 1540641:1542146)  	chr22:42925543-43119330(probes 1540821:1540878)	chr22:40458408-49691432(probes 1539414:1542146)	0.0066855	  0.0066855		Actual Copy Change Given	-0.013815	-0.049877	0.060079	-0.83478	0.0093098	0.034677	-0.66207	-0.019863	0.0066653	-0.04983	-0.58539	-0.006505	-0.091552	0.26765	0.01433	-0.018628	0.052383	-0.018353	-0.048883	-0.66578	-0.025346	-0.04928	-0.036265	-0.77354	0.044432	0.024829	0.0044411	-0.005814	0.14619	-0.0059522	-0.024935	-0.0019399	-0.0020784	-0.68296	-0.028218	0.075889	-0.74118	-0.30522	0.031155	0.059794	0.040105	-0.010575	0.031436	0.0016329	0.051245	0.0032553	-0.029175	0.034395	-0.071606	0.097979	-0.10946	0.061079	0.067518	-0.59224	0.0054139	-0.81868	-0.027945	-0.063838	-0.014778	-0.03395	-0.016154	-0.069064	-0.03817	-0.28358	-1.0061	-0.024114	-0.0033243	0.067232	-0.012713	-0.038714	-0.25031	0.20239	0.045419	-0.024388	0.019503	0.027216	-0.011611	0.042024	-0.040209	-0.03885	
