# Created: Tue Dec 06 00:03:13 EST 2011 by cgaadm_deadline
# Job: 48882    server:  http://tcga-gdac-genepattern.broadinstitute.org:8090/gp/
# Module: MutSigPreprocess urn:lsid:broadinstitute.org:cancer.genome.analysis:00272:63
# Parameters: 
#    individual_set_id = OV
#    maf1 = dependentsValues6255852515212334605.tsv   /gp/getFile.jsp?task=&file=cgaadm_deadline/Axis1603589019805797990.att_dependentsValues6255852515212334605.tsv
#    maf2 = dependentsValues5746295141951644772.tsv   /gp/getFile.jsp?task=&file=cgaadm_deadline/Axis2934168900587697565.att_dependentsValues5746295141951644772.tsv
#    maf3 = dependentsValues3841058003365010492.tsv   /gp/getFile.jsp?task=&file=cgaadm_deadline/Axis5946378353197647577.att_dependentsValues3841058003365010492.tsv
#    maf4 = 
#    maflabel1 = Broad
#    maflabel2 = WashU
#    maflabel3 = Baylor
#    maflabel4 = 
#    wig1 = dependentsValues58081437473883122.tsv   /gp/getFile.jsp?task=&file=cgaadm_deadline/Axis2974210169314268277.att_dependentsValues58081437473883122.tsv
#    wig2 = dependentsValues590886876094437563.tsv   /gp/getFile.jsp?task=&file=cgaadm_deadline/Axis4865342128075767772.att_dependentsValues590886876094437563.tsv
#    wig3 = dependentsValues4011045323142286039.tsv   /gp/getFile.jsp?task=&file=cgaadm_deadline/Axis1801401541423636068.att_dependentsValues4011045323142286039.tsv
#    wig4 = 
#    build = hg18
#    context65_dir = /xchip/cga1/lawrence/db/context65
#    context65_wig = /xchip/cga1/lawrence/db/context65/RefSeq_exons_hg18_june2010_terr_only.wig
#    num_categories = 4
#    target_list = /xchip/cga1/lawrence/capture/RefSeq_exons_hg18_june2010_fix1.txt
#    paramfile = /xchip/cga1/reference/mutsig_params/MutSig1.5.params.txt
