Broad GDAC analyses__2012_03_21__pancancer

Tumor	BCR	Clinical	CN	Methylation	mRNA	mRNAseq	miR	miRseq	MAF
PANCANCER	6251	5089	4422	5197	2218	2175	1055	2844	2610

Note that the links below require Broad internal Firehose login credentials.

	Pipeline	NotRunnable	Successful	Unsuccessful
1	Aggregate_Clusters	0	1	0
2	CopyNumber_GeneBySample	0	1	0
3	CopyNumber_Gistic2	0	1	0
4	CopyNumber_Preprocess	0	1	0
5	Correlate_CopyNumber_vs_miR	0	1	0
6	Correlate_CopyNumber_vs_mRNA	0	1	0
7	Correlate_Methylation_vs_mRNA	0	0	1
8	Methylation_Clustering_CNMF	1	0	0
9	Methylation_Preprocess	0	0	1
10	miR_Clustering_CNMF	0	1	0
11	miR_Clustering_Consensus	0	1	0
12	miR_FindDirectTargets	0	1	0
13	miRseq_Clustering_CNMF	1	0	0
14	miRseq_Clustering_Consensus	1	0	0
15	miRseq_Preprocess	1	0	0
16	mRNA_Clustering_CNMF	0	0	1
17	mRNA_Clustering_Consensus	0	0	1
18	mRNA_Preprocess_Median	0	1	0
19	mRNAseq_Clustering_CNMF	1	0	0
20	mRNAseq_Clustering_Consensus	1	0	0
21	mRNAseq_Preprocess	0	0	1
22	Mutation_Assessor	1	0	0
23	Mutation_Significance	0	0	1
24	Pathway_FindEnrichedGenes	1	0	0
25	Pathway_Paradigm_Expression	0	0	1
26	Pathway_Paradigm_Expression_CopyNumber	0	0	1
27	Pathway_Paradigm_Lite	0	1	0
	Total	8	11	8

This table generated on Sat Apr 21 08:09:22 2012