Unique Name	Descriptor	Wide Peak Limits	Peak Limits	Region Limits	q values	Residual q values after removing segments shared with higher peaks	Broad or Focal	Amplitude Threshold	TCGA-BC-4072-01B-11D-A151-01	TCGA-BC-4073-01B-02D-A12Y-01	TCGA-BC-A10Q-01A-11D-A12Y-01	TCGA-BC-A10R-01A-11D-A12Y-01	TCGA-BC-A10S-01A-22D-A12Y-01	TCGA-BC-A10T-01A-11D-A12Y-01	TCGA-BC-A10U-01A-11D-A12Y-01	TCGA-BC-A10W-01A-11D-A12Y-01	TCGA-BC-A10X-01A-11D-A12Y-01	TCGA-BC-A10Y-01A-11D-A12Y-01	TCGA-BC-A10Z-01A-11D-A12Y-01	TCGA-BC-A110-01A-11D-A12Y-01	TCGA-BC-A112-01A-11D-A12Y-01	TCGA-BC-A216-01A-11D-A151-01	TCGA-BC-A217-01A-11D-A151-01	TCGA-CC-5258-01A-01D-A12Y-01	TCGA-CC-5260-01A-01D-A12Y-01	TCGA-CC-5261-01A-01D-A12Y-01	TCGA-CC-5262-01A-01D-A12Y-01	TCGA-CC-5263-01A-01D-A12Y-01	TCGA-CC-5264-01A-01D-A12Y-01	TCGA-CC-A1HT-01A-11D-A12Y-01	TCGA-DD-A113-01A-11D-A12Y-01	TCGA-DD-A114-01A-11D-A12Y-01	TCGA-DD-A115-01A-11D-A12Y-01	TCGA-DD-A116-01A-11D-A12Y-01	TCGA-DD-A118-01A-11D-A12Y-01	TCGA-DD-A119-01A-11D-A12Y-01	TCGA-DD-A11A-01A-11D-A12Y-01	TCGA-DD-A11B-01A-11D-A12Y-01	TCGA-DD-A11C-01A-11D-A12Y-01	TCGA-DD-A11D-01A-11D-A12Y-01	TCGA-DD-A1E9-01A-21D-A151-01	TCGA-DD-A1EA-01A-11D-A12Y-01	TCGA-DD-A1EB-01A-11D-A12Y-01	TCGA-DD-A1EC-01A-21D-A12Y-01	TCGA-DD-A1ED-01A-11D-A151-01	TCGA-DD-A1EE-01A-11D-A12Y-01	TCGA-DD-A1EF-01A-11D-A12Y-01	TCGA-DD-A1EH-01A-11D-A12Y-01	TCGA-DD-A1EI-01A-11D-A12Y-01	TCGA-DD-A1EJ-01A-11D-A151-01	TCGA-DD-A1EL-01A-11D-A151-01	TCGA-EP-A12J-01A-11D-A12Y-01	TCGA-EP-A26S-01A-11D-A16U-01	TCGA-FV-A23B-01A-11D-A16U-01	TCGA-G3-A25S-01A-11D-A16U-01	TCGA-G3-A25T-01A-11D-A16U-01	TCGA-G3-A25U-01A-11D-A16U-01	TCGA-G3-A25V-01A-11D-A16U-01	TCGA-G3-A25W-01A-11D-A16U-01	TCGA-G3-A25Y-01A-11D-A16U-01	TCGA-G3-A25Z-01A-11D-A16U-01	
Amplification Peak  1	1q21.2 	chr1:1-247249719(probes 1:128525)                   	chr1:148889321-149028395(probes 67385:67451)      	chr1:121045617-168005671(probes 66261:78861)      	0.0072315	          1		0: t<0.3; 1: 0.3<t< 0.9; 2: t>0.9	0	0	1	1	0	0	1	2	0	2	1	0	1	1	2	1	0	2	1	1	2	1	2	1	1	0	1	2	0	1	1	1	2	2	1	0	0	2	1	2	0	0	1	1	1	1	1	0	1	0	1	2	1	
Amplification Peak  2	1q23.3 	chr1:158773709-159925403(probes 72430:72938)      	chr1:159345297-159459134(probes 72812:72860)      	chr1:121045617-168005671(probes 66261:78861)      	0.0097933	   0.011247		0: t<0.3; 1: 0.3<t< 0.9; 2: t>0.9	0	0	1	1	0	1	2	2	0	2	1	0	1	2	2	1	0	2	1	2	2	1	2	1	0	0	1	2	2	1	2	1	2	2	1	0	0	2	1	2	0	0	1	1	1	1	1	0	1	0	1	2	1	
Amplification Peak  3	2p24.1 	chr2:1-27538143(probes 128526:146476)                   	chr2:20475977-20481496(probes 142685:142688)        	chr2:20475977-20483573(probes 142685:142691)        	0.23604	    0.23604		0: t<0.3; 1: 0.3<t< 0.9; 2: t>0.9	1	0	1	1	0	1	0	0	0	2	0	0	0	0	1	0	0	0	0	1	1	0	0	0	1	0	0	0	1	0	1	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	1	0	0	1	0	1	
Amplification Peak  4	3q26.31	chr3:173737376-173779556(probes 362935:362955)    	chr3:173756018-173778597(probes 362946:362954)    	chr3:173737376-173795829(probes 362935:362968)    	0.17594	    0.17594		0: t<0.3; 1: 0.3<t< 0.9; 2: t>0.9	0	0	0	1	0	2	0	0	0	2	2	0	0	0	2	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	2	0	0	0	0	0	0	0	1	0	0	1	0	0	0	0	0	0	0	0	0	0	0	
Amplification Peak  5	4q13.3 	chr4:74503551-74538973(probes 417704:417727)        	chr4:74504200-74538757(probes 417705:417726)        	chr4:74504200-74544451(probes 417705:417729)        	0.19184	    0.19184		0: t<0.3; 1: 0.3<t< 0.9; 2: t>0.9	0	0	0	2	0	0	0	0	0	0	0	0	0	0	1	1	0	1	0	0	0	0	1	0	0	0	0	0	0	0	2	0	0	0	0	1	0	0	0	1	0	0	0	1	0	0	0	0	0	0	0	0	0	
Amplification Peak  6	5p15.33	chr5:1009672-1339515(probes 484096:484183)            	chr5:1285911-1339296(probes 484123:484181)            	chr5:1017251-1340539(probes 484097:484185)            	0.18058	    0.18058		0: t<0.3; 1: 0.3<t< 0.9; 2: t>0.9	0	0	1	1	0	0	0	1	0	1	2	0	0	1	0	0	0	0	0	1	2	1	0	0	1	1	1	0	0	0	0	1	1	1	0	0	0	0	1	0	2	0	1	0	0	1	0	0	0	0	1	0	0	
Amplification Peak  7	5q31.1 	chr5:133799381-133822028(probes 559229:559233)    	chr5:133799967-133819337(probes 559230:559232)    	chr5:133799967-133825478(probes 559230:559235)    	0.20526	    0.20526		0: t<0.3; 1: 0.3<t< 0.9; 2: t>0.9	0	0	1	0	0	2	0	1	0	2	0	0	1	2	0	0	0	0	0	0	0	0	1	0	2	1	1	1	0	0	0	1	1	1	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	1	0	0	
Amplification Peak  8	6p21.1 	chr6:43876809-43886368(probes 614343:614345)        	chr6:43878129-43885676(probes 614344:614344)        	chr6:43727200-44064592(probes 614264:614459)        	0.0097933	  0.0097933		0: t<0.3; 1: 0.3<t< 0.9; 2: t>0.9	0	0	0	0	0	2	2	0	0	2	1	0	0	2	0	0	0	1	0	1	0	0	0	1	1	0	1	2	1	0	1	2	0	0	1	0	0	1	1	2	0	0	0	0	0	2	2	0	0	0	0	0	0	
Amplification Peak  9	6q12   	chr6:67601419-67634943(probes 625101:625140)        	chr6:67607954-67632857(probes 625102:625139)        	chr6:67607954-67635572(probes 625102:625142)        	0.18058	    0.18058		0: t<0.3; 1: 0.3<t< 0.9; 2: t>0.9	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	1	0	0	0	0	0	0	1	2	1	0	0	2	0	0	0	0	0	0	1	2	0	0	0	2	0	0	0	0	0	0	0	0	0	
Amplification Peak 10	7q21.2 	chr7:90288913-92559550(probes 735026:736546)        	chr7:90291015-92553937(probes 735027:736545)        	chr7:90291015-92572000(probes 735027:736548)        	0.17594	    0.17594		0: t<0.3; 1: 0.3<t< 0.9; 2: t>0.9	2	0	1	1	0	0	1	0	0	0	0	0	0	0	0	0	1	0	0	0	2	0	0	0	0	0	1	0	2	0	0	1	0	0	0	1	0	1	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	
Amplification Peak 11	11q13.2	chr11:68713597-68771449(probes 1044729:1044771)    	chr11:68713687-68767630(probes 1044730:1044770)    	chr11:68453282-69773792(probes 1044569:1045339)    	9.6605e-05	 9.6605e-05		0: t<0.3; 1: 0.3<t< 0.9; 2: t>0.9	0	1	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	2	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	2	0	0	0	2	0	0	
Amplification Peak 12	13q34  	chr13:106978732-114142980(probes 1221233:1225333)	chr13:108989003-109511452(probes 1222816:1223203)	chr13:106978765-114142980(probes 1221234:1225333)	0.066106	   0.066106		0: t<0.3; 1: 0.3<t< 0.9; 2: t>0.9	0	0	0	0	0	0	0	2	0	0	0	0	0	0	1	0	0	1	0	1	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	2	0	1	2	0	0	0	0	0	0	0	
Amplification Peak 13	16q11.2	chr16:31813563-46192072(probes 1331270:1331669)    	chr16:31814074-45172831(probes 1331271:1331289)    	chr16:31814074-46197732(probes 1331271:1331671)    	0.17594	    0.17594		0: t<0.3; 1: 0.3<t< 0.9; 2: t>0.9	0	0	0	0	0	0	0	2	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	2	0	0	0	0	0	0	
Amplification Peak 14	17q25.3	chr17:76596751-78239374(probes 1399255:1399466)    	chr17:77741560-78114380(probes 1399283:1399391)    	chr17:76469687-78774742(probes 1399204:1399666)    	0.10175	    0.10175		0: t<0.3; 1: 0.3<t< 0.9; 2: t>0.9	1	0	1	0	0	1	1	1	0	1	1	0	2	0	2	0	0	0	0	1	0	0	0	1	1	1	0	0	1	0	1	0	0	1	2	0	0	0	0	0	0	1	0	0	0	0	2	0	1	0	2	0	1	
Amplification Peak 15	20q13.2	chr20:50693176-54369134(probes 1501080:1503980)    	chr20:53034176-53462922(probes 1502899:1503198)    	chr20:53034176-53465997(probes 1502899:1503201)    	0.21798	    0.21798		0: t<0.3; 1: 0.3<t< 0.9; 2: t>0.9	1	0	1	1	0	0	0	0	0	1	0	0	0	0	0	0	0	2	0	0	1	0	2	0	0	0	1	0	0	1	2	0	0	0	0	0	0	0	1	0	0	1	0	0	0	1	1	0	0	0	0	0	0	
Deletion Peak  1	1p36.23 	chr1:1-8309316(probes 1:2931)                         	chr1:7990016-8012814(probes 2785:2794)                	chr1:1-35401375(probes 1:16440)                      	7.7868e-08	 7.7868e-08		0: t>-0.3; 1: -0.3>t> -1.3; 2: t< -1.3	0	0	1	0	1	1	0	1	0	1	0	0	1	0	1	0	1	1	1	1	0	0	1	0	0	1	1	0	1	1	1	1	0	0	1	0	0	0	1	1	0	1	0	0	0	1	1	0	0	0	1	1	0	
Deletion Peak  2	1p33    	chr1:50652354-51210952(probes 24731:24966)          	chr1:50676371-51210952(probes 24735:24966)          	chr1:50897044-50908488(probes 24851:24852)          	0.19242	    0.19242		0: t>-0.3; 1: -0.3>t> -1.3; 2: t< -1.3	0	0	1	0	1	0	0	0	0	0	0	0	0	0	0	1	0	1	0	0	0	0	1	0	0	0	1	0	1	1	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	1	1	0	0	0	0	1	1	
Deletion Peak  3	2p15    	chr2:62267493-207340787(probes 168481:243384)      	chr2:63666963-63710454(probes 169156:169173)        	chr2:63536650-63764657(probes 169095:169202)        	0.13818	    0.13818		0: t>-0.3; 1: -0.3>t> -1.3; 2: t< -1.3	0	1	0	0	0	0	0	0	0	0	1	0	0	1	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	
Deletion Peak  4	2q23.1  	chr2:138435310-165520964(probes 204371:219777)    	chr2:148400433-148499247(probes 210162:210197)    	chr2:147688694-148867827(probes 209764:210378)    	0.027339	   0.027339		0: t>-0.3; 1: -0.3>t> -1.3; 2: t< -1.3	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	1	0	0	0	0	1	1	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	
Deletion Peak  5	2q34    	chr2:208838538-242951149(probes 244226:264000)    	chr2:211048901-211254287(probes 245482:245618)    	chr2:211130772-211250880(probes 245537:245616)    	0.017434	   0.017434		0: t>-0.3; 1: -0.3>t> -1.3; 2: t< -1.3	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	1	0	0	0	0	0	1	0	0	0	0	0	1	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	
Deletion Peak  6	3p21.1  	chr3:52547488-52919124(probes 295441:295587)        	chr3:52554049-52702296(probes 295444:295511)        	chr3:52603857-52856958(probes 295468:295557)        	0.088143	    0.09176		0: t>-0.3; 1: -0.3>t> -1.3; 2: t< -1.3	0	0	1	0	0	0	0	0	0	0	1	0	1	0	1	1	1	0	0	1	0	0	1	0	0	0	1	0	0	0	0	0	0	1	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	
Deletion Peak  7	4q22.3  	chr4:76699973-123507109(probes 419013:445781)      	chr4:96978472-100463012(probes 431203:433014)      	chr4:79553041-110325497(probes 420894:438086)      	0.0031499	    0.09176		0: t>-0.3; 1: -0.3>t> -1.3; 2: t< -1.3	0	0	0	0	0	1	1	0	0	1	1	0	1	0	0	1	0	1	0	1	1	0	1	0	0	1	0	0	1	0	1	0	0	0	1	0	0	0	0	1	1	1	1	0	0	0	1	0	0	0	0	1	1	
Deletion Peak  8	4q24    	chr4:1-191273063(probes 377682:483959)               	chr4:104729207-104861368(probes 435410:435464)    	chr4:79553041-110325497(probes 420894:438086)      	0.0031689	    0.77436		0: t>-0.3; 1: -0.3>t> -1.3; 2: t< -1.3	1	0	0	0	0	1	1	0	0	1	1	0	1	0	0	1	0	1	0	1	1	0	1	0	0	1	0	0	1	1	1	0	0	0	1	0	0	0	0	1	1	0	1	0	0	0	1	0	0	0	0	1	1	
Deletion Peak  9	4q31.3  	chr4:151397952-152240226(probes 460578:460963)    	chr4:151403305-152162465(probes 460592:460933)    	chr4:151663443-151931368(probes 460697:460811)    	0.038028	    0.12018		0: t>-0.3; 1: -0.3>t> -1.3; 2: t< -1.3	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	1	0	1	0	0	1	0	1	0	0	1	0	0	1	1	0	0	0	0	0	0	0	0	0	1	1	0	2	0	0	0	1	0	0	0	0	1	1	
Deletion Peak 10	4q35.1  	chr4:1-191273063(probes 377682:483959)               	chr4:185783044-185985963(probes 481298:481381)    	chr4:175506290-191273063(probes 474506:483959)    	0.0026302	    0.25613		0: t>-0.3; 1: -0.3>t> -1.3; 2: t< -1.3	0	0	0	1	0	1	0	1	0	0	1	0	1	0	1	1	0	1	0	0	1	1	1	0	0	1	0	0	1	1	0	0	0	0	0	0	0	0	0	1	1	2	1	0	0	0	1	0	0	0	0	1	1	
Deletion Peak 11	6q15    	chr6:44330865-170414665(probes 614561:686663)      	chr6:89844069-90663833(probes 637942:638418)        	chr6:82521340-94926462(probes 633739:641307)        	0.13818	    0.22392		0: t>-0.3; 1: -0.3>t> -1.3; 2: t< -1.3	0	0	1	1	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	1	0	1	0	1	0	1	1	0	0	1	0	0	0	0	1	0	1	1	1	0	0	0	1	0	1	1	1	0	0	0	0	0	
Deletion Peak 12	6q26    	chr6:44330865-170899992(probes 614561:686881)      	chr6:161329463-161463410(probes 680871:680957)    	chr6:161407645-161410264(probes 680915:680916)    	0.16298	    0.20182		0: t>-0.3; 1: -0.3>t> -1.3; 2: t< -1.3	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	1	0	1	1	0	1	0	1	1	0	0	1	0	0	0	0	0	0	1	0	1	0	0	0	1	0	1	1	1	0	0	0	1	0	
Deletion Peak 13	7q34    	chr7:1-158821424(probes 686882:773192)               	chr7:138773909-138893422(probes 762294:762295)    	chr7:138775279-138896831(probes 762295:762296)    	0.24123	    0.25613		0: t>-0.3; 1: -0.3>t> -1.3; 2: t< -1.3	1	0	0	0	0	0	0	0	0	0	0	0	0	1	1	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	1	0	0	0	0	0	0	
Deletion Peak 14	8p23.2  	chr8:2080589-6255647(probes 774191:776550)            	chr8:2771826-4954788(probes 774437:775391)            	chr8:3274513-3276262(probes 774915:774916)            	0.022767	   0.022462		0: t>-0.3; 1: -0.3>t> -1.3; 2: t< -1.3	1	0	0	1	1	1	1	0	0	0	0	0	1	1	1	1	0	1	1	1	0	1	1	0	1	1	1	1	0	0	1	0	0	0	0	0	0	1	1	0	1	1	1	1	1	0	1	0	0	0	1	1	0	
Deletion Peak 15	9p23    	chr9:7786330-12683402(probes 861784:864667)          	chr9:8300705-10626053(probes 862224:863817)          	chr9:9338398-9339566(probes 863021:863022)            	0.12242	    0.12184		0: t>-0.3; 1: -0.3>t> -1.3; 2: t< -1.3	1	0	0	1	0	0	1	0	0	0	0	0	1	0	0	1	0	0	0	0	0	0	1	0	1	1	0	0	0	1	1	0	0	0	0	0	0	0	0	0	1	0	1	0	0	0	1	0	0	0	0	0	0	
Deletion Peak 16	9p21.3  	chr9:21020852-23680570(probes 871340:873018)        	chr9:21427580-21859078(probes 871608:871947)        	chr9:21398293-22974614(probes 871596:872519)        	0.04488	   0.046925		0: t>-0.3; 1: -0.3>t> -1.3; 2: t< -1.3	1	0	0	1	1	0	1	0	0	0	0	0	1	0	0	1	0	1	0	0	0	0	1	0	1	2	0	1	0	1	1	0	0	0	0	0	0	0	0	0	1	0	1	0	0	1	1	0	0	0	0	0	0	
Deletion Peak 17	9q31.1  	chr9:101620195-140273252(probes 903015:926610)    	chr9:102978829-103128640(probes 903796:903912)    	chr9:103061471-103064365(probes 903855:903856)    	0.17657	    0.22392		0: t>-0.3; 1: -0.3>t> -1.3; 2: t< -1.3	0	0	0	1	0	0	1	0	0	0	0	0	1	0	1	1	0	0	0	0	0	0	1	0	0	1	0	0	1	1	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	1	0	0	0	0	0	
Deletion Peak 18	9q34.13 	chr9:1-140273252(probes 855383:926610)               	chr9:134755386-134814864(probes 925005:925131)    	chr9:134784988-134785075(probes 925069:925070)    	0.15068	    0.25613		0: t>-0.3; 1: -0.3>t> -1.3; 2: t< -1.3	0	0	0	1	0	0	1	0	0	0	0	0	1	0	1	1	0	0	0	0	0	0	1	0	0	1	0	0	1	1	1	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	1	1	0	0	0	0	0	
Deletion Peak 19	10q23.31	chr10:88837980-90024018(probes 978677:979366)      	chr10:89607382-89725576(probes 978919:979122)      	chr10:89669369-89669428(probes 979021:979022)      	0.012515	   0.051476		0: t>-0.3; 1: -0.3>t> -1.3; 2: t< -1.3	0	1	1	1	0	0	0	1	0	2	0	0	1	1	1	0	1	0	0	1	0	1	0	0	1	0	1	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	1	0	0	0	0	
Deletion Peak 20	10q26.2 	chr10:123231113-135374737(probes 1000608:1008355)	chr10:128574988-129146324(probes 1004325:1004747)	chr10:128809684-129166808(probes 1004482:1004767)	0.012098	   0.019034		0: t>-0.3; 1: -0.3>t> -1.3; 2: t< -1.3	0	1	1	1	0	0	0	1	0	1	0	0	1	0	1	0	1	0	0	0	0	1	0	0	1	0	0	0	1	0	1	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	1	1	0	0	1	0	
Deletion Peak 21	11q14.1 	chr11:77555851-94349006(probes 1049255:1059938)    	chr11:82843294-85026442(probes 1052503:1053908)    	chr11:83911509-83917623(probes 1053206:1053207)    	0.096761	    0.14987		0: t>-0.3; 1: -0.3>t> -1.3; 2: t< -1.3	0	1	1	0	0	0	0	0	0	0	0	0	1	0	1	0	0	0	0	1	1	0	1	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	
Deletion Peak 22	11q24.3 	chr11:102421578-134452384(probes 1065567:1086967)	chr11:128308836-128320546(probes 1083033:1083042)	chr11:128298943-128321515(probes 1083022:1083044)	0.056755	    0.19242		0: t>-0.3; 1: -0.3>t> -1.3; 2: t< -1.3	0	1	1	0	0	0	0	0	0	0	0	0	1	0	1	0	0	0	0	1	1	0	1	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	1	0	0	0	0	
Deletion Peak 23	12q24.31	chr12:109829625-132349534(probes 1151423:1165153)	chr12:119684091-119830953(probes 1157955:1158054)	chr12:119720489-119824357(probes 1157983:1158049)	0.20028	    0.19242		0: t>-0.3; 1: -0.3>t> -1.3; 2: t< -1.3	0	0	0	0	0	0	0	0	0	0	0	0	0	1	1	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	1	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	
Deletion Peak 24	13q14.2 	chr13:47731768-47962808(probes 1184961:1185190)    	chr13:47773754-47958838(probes 1184984:1185188)    	chr13:47804497-47984169(probes 1185019:1185204)    	0.00030558	 0.00085033		0: t>-0.3; 1: -0.3>t> -1.3; 2: t< -1.3	0	0	1	1	0	1	0	1	0	1	2	0	1	0	1	0	1	1	1	1	1	0	1	0	1	1	1	0	0	0	1	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	1	1	0	0	0	1	0	
Deletion Peak 25	13q14.3 	chr13:1-94080173(probes 1165154:1211968)           	chr13:49451053-49608579(probes 1185930:1185971)    	chr13:49421672-49612081(probes 1185916:1185973)    	0.024497	    0.20182		0: t>-0.3; 1: -0.3>t> -1.3; 2: t< -1.3	0	0	1	1	0	1	0	1	0	1	1	0	1	0	1	0	1	1	1	1	1	0	1	0	1	1	1	0	0	0	2	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	1	1	0	0	0	1	0	
Deletion Peak 26	13q32.3 	chr13:99428994-100055448(probes 1215423:1215736)  	chr13:99526231-99984056(probes 1215460:1215703)    	chr13:99783034-99787062(probes 1215582:1215583)    	0.066172	   0.062681		0: t>-0.3; 1: -0.3>t> -1.3; 2: t< -1.3	0	1	1	1	0	1	0	0	0	0	0	0	1	0	1	0	1	0	1	0	1	0	0	0	0	1	1	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	1	1	0	0	0	0	0	
Deletion Peak 27	14q31.3 	chr14:74536625-106368585(probes 1256169:1271377)  	chr14:88688902-88957936(probes 1265186:1265376)    	chr14:74976692-89413682(probes 1256453:1265689)    	0.0059411	  0.0059411		0: t>-0.3; 1: -0.3>t> -1.3; 2: t< -1.3	0	1	1	1	0	1	0	0	0	0	0	0	1	0	1	1	0	1	0	0	1	1	1	0	0	0	1	0	1	0	1	0	1	0	0	0	0	0	0	0	1	1	1	1	0	0	1	0	0	0	0	0	0	
Deletion Peak 28	16q24.2 	chr16:70485567-88827254(probes 1346119:1359598)    	chr16:86467782-88154394(probes 1358935:1359360)    	chr16:86410477-88175363(probes 1358926:1359368)    	0.059144	   0.056098		0: t>-0.3; 1: -0.3>t> -1.3; 2: t< -1.3	0	0	0	1	1	0	0	1	0	0	0	0	0	1	1	1	1	1	1	1	1	1	1	0	0	1	0	0	1	1	0	0	0	0	0	0	0	0	0	1	1	0	1	0	0	1	1	0	1	0	0	1	1	
Deletion Peak 29	17p13.2 	chr17:1-4658761(probes 1359599:1361635)               	chr17:4038442-4119691(probes 1361381:1361428)        	chr17:4076549-4080867(probes 1361405:1361406)        	0.20077	    0.19242		0: t>-0.3; 1: -0.3>t> -1.3; 2: t< -1.3	1	1	0	1	0	0	1	0	0	1	1	0	1	0	1	1	1	1	1	1	1	1	0	0	1	1	1	1	1	0	1	1	0	1	1	0	0	0	0	1	1	1	1	0	0	1	1	0	1	0	1	1	1	
Deletion Peak 30	17p11.2 	chr17:15832052-16062027(probes 1368676:1368772)    	chr17:15832482-16062027(probes 1368677:1368772)    	chr17:15851012-15858213(probes 1368685:1368686)    	0.095983	   0.092912		0: t>-0.3; 1: -0.3>t> -1.3; 2: t< -1.3	1	1	0	1	0	1	1	0	0	1	1	0	1	0	1	1	0	1	1	1	0	1	0	0	1	2	1	1	0	0	1	1	0	1	1	0	0	0	0	0	1	1	1	0	0	1	1	0	1	0	1	1	1	
Deletion Peak 31	18q21.2 	chr18:46509167-46959369(probes 1426872:1427219)    	chr18:46574423-46770518(probes 1426912:1427037)    	chr18:46575551-46820327(probes 1426914:1427076)    	0.039499	   0.038451		0: t>-0.3; 1: -0.3>t> -1.3; 2: t< -1.3	0	0	0	1	0	0	1	0	0	0	0	0	1	2	1	0	0	0	0	0	0	0	0	0	0	0	1	0	1	1	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	1	0	0	0	0	0	0	
Deletion Peak 32	18q22.1 	chr18:50644442-76117153(probes 1429626:1445765)    	chr18:62319997-62428389(probes 1436792:1436846)    	chr18:62357027-62362543(probes 1436820:1436821)    	0.20308	    0.20182		0: t>-0.3; 1: -0.3>t> -1.3; 2: t< -1.3	0	0	0	1	0	0	0	0	0	0	0	0	1	1	1	0	0	0	0	0	0	0	0	0	0	0	1	1	1	1	1	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	1	0	0	0	0	0	0	
Deletion Peak 33	19p13.3 	chr19:6619605-6686925(probes 1446856:1446899)        	chr19:6620137-6673043(probes 1446857:1446894)        	chr19:1-6686925(probes 1445766:1446899)              	0.0075482	   0.012098		0: t>-0.3; 1: -0.3>t> -1.3; 2: t< -1.3	0	0	0	0	0	0	0	1	0	0	0	0	1	0	0	2	0	0	0	0	0	0	1	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	1	0	1	0	0	0	1	0	0	0	0	0	0	
Deletion Peak 34	19p13.12	chr19:10621992-17905559(probes 1448499:1451984)    	chr19:15844972-15874337(probes 1451009:1451021)    	chr19:15845743-15880197(probes 1451010:1451025)    	0.12184	    0.16414		0: t>-0.3; 1: -0.3>t> -1.3; 2: t< -1.3	0	0	0	0	0	0	0	2	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	1	0	0	0	0	0	1	0	0	0	0	0	1	0	0	0	0	0	0	
Deletion Peak 35	22q13.31	chr22:40804400-49691432(probes 1539623:1542142)    	chr22:45385177-49691432(probes 1542124:1542142)    	chr22:40816670-49691432(probes 1539628:1542142)    	0.024075	   0.022806		0: t>-0.3; 1: -0.3>t> -1.3; 2: t< -1.3	0	0	1	0	0	1	0	0	0	1	0	0	0	1	2	0	1	0	0	0	1	1	1	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	1	1	0	0	0	0	0	
Amplification Peak  1 - CN values	1q21.2 	chr1:1-247249719(probes 1:128525)                   	chr1:148889321-149028395(probes 67385:67451)      	chr1:121045617-168005671(probes 66261:78861)      	0.0072315	          1		Actual Copy Change Given	0.01447	0.0083351	0.3715	0.80655	0.0066653	-0.070001	0.89829	3.3103	0.039619	0.96821	0.8566	0.086811	0.47084	0.68209	6	0.60088	0.03369	1.1821	0.39214	0.80131	0.98535	0.73948	1.0529	0.52818	0.67161	-0.013815	0.38006	1.0532	-0.16256	0.75662	0.67827	0.63938	0.9808	1.2127	0.62369	-0.0098185	0.00068372	1.4762	0.5738	1.3529	-0.12823	0.25574	0.42855	0.77445	0.80553	0.7317	0.65627	0.0079175	0.73416	0.047082	0.83137	1.0889	0.56756	
Amplification Peak  2 - CN values	1q23.3 	chr1:158773709-159925403(probes 72430:72938)      	chr1:159345297-159459134(probes 72812:72860)      	chr1:121045617-168005671(probes 66261:78861)      	0.0097933	   0.011247		Actual Copy Change Given	0.01447	0.014749	0.36953	0.85253	0.010146	0.73057	0.9304	3.196	0.050534	1.008	0.87269	0.052383	0.70738	1.5088	2.9623	0.61552	0.056513	1.2989	0.3628	1.6655	1.0268	0.40827	1.189	0.51298	0.0063997	-0.025756	0.42351	1.1353	1.6589	0.75395	1.365	0.70626	0.98183	1.2488	0.66937	-0.01849	0.0045704	1.489	0.61534	1.3917	0.016425	0.25574	0.43529	0.79026	0.78699	0.76408	0.68924	0.0079175	0.78273	-0.0055375	0.57202	1.1086	0.56395	
Amplification Peak  3 - CN values	2p24.1 	chr2:1-27538143(probes 128526:146476)                   	chr2:20475977-20481496(probes 142685:142688)        	chr2:20475977-20483573(probes 142685:142691)        	0.23604	    0.23604		Actual Copy Change Given	0.50724	-0.0047079	0.33027	0.34339	-0.0051227	0.5231	0.0055055	-0.025483	-0.0073339	1.9133	-0.020275	-0.00089004	0.071535	0.011621	0.79316	0.0040243	0.016006	0.016146	-0.0070576	0.69559	0.66752	0.006109	0.22545	-0.048478	0.79607	-0.041431	-0.0083005	-0.014366	0.85798	-0.011749	0.46895	-0.005814	0.1795	-0.022469	-0.0084385	-0.007472	0.00026773	0	0.067088	0.014749	-0.051586	0.15532	0.7332	-0.017529	-0.019851	-0.022744	-0.20196	0.33254	-0.041024	-0.010747	0.3837	0.026205	0.48135	
Amplification Peak  4 - CN values	3q26.31	chr3:173737376-173779556(probes 362935:362955)    	chr3:173756018-173778597(probes 362946:362954)    	chr3:173737376-173795829(probes 362935:362968)    	0.17594	    0.17594		Actual Copy Change Given	-0.028491	0.005014	-0.0044312	0.39463	0.012655	2.3921	-0.028081	0.018103	0.0072217	0.9596	0.92249	-0.0083005	-0.30416	-0.019234	1.3203	0.019223	0.048546	0.010564	0.0066653	0.094201	0.058367	0.05281	-0.34584	0.10031	0.77812	0.062937	-0.41155	0.11734	-0.26336	0.015168	1.7365	-0.0033243	-0.1698	0.0063871	0.01373	0.02806	-0.018774	0.013213	0.52066	-0.072541	0.029888	0.42991	0.10409	0.020623	0.014483	0.02539	0.04812	-0.077345	0.074414	0.018663	-0.0055375	0.017236	0.03637	
Amplification Peak  5 - CN values	4q13.3 	chr4:74503551-74538973(probes 417704:417727)        	chr4:74504200-74538757(probes 417705:417726)        	chr4:74504200-74544451(probes 417705:417729)        	0.19184	    0.19184		Actual Copy Change Given	-0.021921	0.010285	0.0029133	1.0084	0.015727	0.023286	-0.81178	0.040044	0.012376	-0.81351	-0.89588	-0.010508	-0.30004	-0.0020382	0.35398	0.64048	-0.0047079	0.36871	-0.0024938	0.091246	-0.5293	0.0063871	0.36379	-0.21552	0.05268	-0.62284	0.030451	-0.16815	-0.71159	0.031999	2.3605	0	-0.0015243	0.0098669	0.017684	0.44223	-0.015201	0.023566	-0.045228	0.39645	-0.41652	-1.0605	-0.68169	0.88026	0.027229	0.017544	-0.66559	-0.065447	0.047126	0.0049969	0.00027728	-0.62981	-0.71515	
Amplification Peak  6 - CN values	5p15.33	chr5:1009672-1339515(probes 484096:484183)            	chr5:1285911-1339296(probes 484123:484181)            	chr5:1017251-1340539(probes 484097:484185)            	0.18058	    0.18058		Actual Copy Change Given	-0.014366	0.00027728	0.35381	0.40561	-0.074411	-0.10158	0.0034687	0.30481	-0.02151	0.47529	1.5719	0.008892	0.042732	0.74339	0.057368	0.211	0.010146	-0.046041	-0.023453	0.63554	1.3173	0.30393	0.065799	-0.023429	0.88428	0.39978	0.39961	0.10366	0.122	-0.0059522	-0.040209	0.69372	0.59656	0.65295	-0.066511	0	0.013901	0.13687	0.31434	-0.28798	1.9039	-0.13561	0.74155	-0.016154	-0.077147	0.72357	0.23985	-0.06142	-0.080058	-0.013677	0.32012	-0.049046	-0.055499	
Amplification Peak  7 - CN values	5q31.1 	chr5:133799381-133822028(probes 559229:559233)    	chr5:133799967-133819337(probes 559230:559232)    	chr5:133799967-133825478(probes 559230:559235)    	0.20526	    0.20526		Actual Copy Change Given	-0.021373	-0.00027724	0.35806	-0.44652	-0.10788	1.5983	-0.0066432	0.37578	-0.0066432	1.5098	0.0052749	0.015727	0.38899	1.073	-0.027671	-0.014366	0.0041632	-0.011101	-0.0066432	-0.78589	-0.57615	0.079369	0.7027	-0.032041	1.4523	0.43952	0.39464	0.89207	-0.21008	0.015389	-0.0024938	0.69634	0.58955	0.65479	0.00041593	0.017684	-0.0093124	0.13422	-0.12121	-0.25967	0.041034	-0.18521	-0.02247	0.010842	0.0011222	-0.0091286	0.57099	0.27726	-0.027228	0.00013863	0.38403	0.009282	0.01447	
Amplification Peak  8 - CN values	6p21.1 	chr6:43876809-43886368(probes 614343:614345)        	chr6:43878129-43885676(probes 614344:614344)        	chr6:43727200-44064592(probes 614264:614459)        	0.0097933	  0.0097933		Actual Copy Change Given	0.017404	-0.0080244	0.00027728	-0.0060904	0.008166	0.92128	1.4776	0.0038854	0.031827	2.441	0.89402	0.043609	0.039195	3.0808	0.22965	0.0041632	-0.0030475	0.65461	-0.00055444	0.47238	-0.049424	0.015866	-0.0033243	0.30282	0.33395	-0.072418	0.39761	0.97956	0.6777	-0.011749	0.35023	2.2137	-0.16879	-0.0091286	0.53749	0.015028	-0.00070257	0.70345	0.52275	1.4065	-0.19475	-0.10118	0.04882	-0.0074691	-0.0030346	1.2868	1.2147	-0.054286	0.072684	-0.0092666	0	-0.007578	-0.0059881	
Amplification Peak  9 - CN values	6q12   	chr6:67601419-67634943(probes 625101:625140)        	chr6:67607954-67632857(probes 625102:625139)        	chr6:67607954-67635572(probes 625102:625142)        	0.18058	    0.18058		Actual Copy Change Given	-0.044009	0.013353	0.00055459	0.032704	0.024969	0.028481	-0.014503	0.027638	0.03863	0.046984	-0.0019399	-0.00022042	0.073833	0.018045	0.20656	0.013353	0.47409	0.018243	-0.035857	0.55071	-0.52998	0.043015	0.045282	-0.2351	0.13955	0.08392	0.82862	1.0174	0.6598	0.033408	-0.3819	2.9256	-0.17148	0.028903	0.042024	0.027076	-0.057394	-0.75063	0.57934	1.5628	-0.2056	-0.17891	-0.013824	1.6348	0.025544	-0.77549	-0.69432	-0.30334	0.16911	0.0282	-0.027932	0.012209	-0.038714	
Amplification Peak 10 - CN values	7q21.2 	chr7:90288913-92559550(probes 735026:736546)        	chr7:90291015-92553937(probes 735027:736545)        	chr7:90291015-92572000(probes 735027:736548)        	0.17594	    0.17594		Actual Copy Change Given	6	0.006109	0.76485	0.41279	0.015727	0.015308	0.77003	0.017544	0.039337	-0.83801	0.013353	0.084065	0.066229	-0.016439	-0.79381	0.024969	0.58955	-0.34021	0.027919	0.10366	1.0896	0.044007	0.17679	-0.0073184	0.030463	0.080745	0.41496	-0.0042929	0.90167	0.026935	0.019363	0.69279	0.26577	0.00041593	0.024408	0.82764	-0.021793	0.72584	-0.10434	0.1498	0.039337	0.20932	-0.70541	0.029606	0.86277	0.022865	-0.29968	0.25199	0.021884	0.13835	-0.0044353	0.013883	0.061365	
Amplification Peak 11 - CN values	11q13.2	chr11:68713597-68771449(probes 1044729:1044771)    	chr11:68713687-68767630(probes 1044730:1044770)    	chr11:68453282-69773792(probes 1044569:1045339)    	9.6605e-05	 9.6605e-05		Actual Copy Change Given	-0.0022168	0.49147	-0.37775	-0.060273	-0.27834	0.53292	0.091147	-0.032587	-0.0099565	-0.089706	-0.03704	0.010006	-0.33906	-0.051507	-0.33514	-0.012438	0	-0.024114	0.0068044	-0.16688	4.8079	-0.056846	-0.41333	0.080665	0.32545	-0.065581	-0.012024	0.18177	0.083769	0.0040243	-0.043331	-0.015466	-0.1637	-0.033677	-0.061823	-0.017529	0.0040147	-0.007243	-0.062617	-0.0029091	0.016705	-0.12797	-0.049028	-0.024935	-0.014862	-0.020412	4.57	0	-0.11254	-0.010496	6	0.025222	-0.0008316	
Amplification Peak 12 - CN values	13q34  	chr13:106978732-114142980(probes 1221233:1225333)	chr13:108989003-109511452(probes 1222816:1223203)	chr13:106978765-114142980(probes 1221234:1225333)	0.066106	   0.066106		Actual Copy Change Given	-0.015604	-0.036674	-0.39408	-0.47934	-0.0024938	-0.65798	-0.056307	3.1436	0.02539	-0.049559	-0.026714	-0.0081624	-0.3414	0.012039	0.69255	0.27003	-0.57915	0.89006	-0.3825	0.52363	-0.62162	0.040468	0.43142	0.068931	-0.18847	-0.70129	-0.86145	-0.02095	0.10163	-0.026988	-0.43051	0.00083195	-0.00013862	-0.021921	-0.032314	-0.0066432	0.0048483	0.013598	-0.16777	0	-0.45843	0.28237	1.0076	-0.01406	0.79764	1.9392	-0.31622	-0.38213	-0.086521	-0.012483	-0.057493	0.061908	-0.082269	
Amplification Peak 13 - CN values	16q11.2	chr16:31813563-46192072(probes 1331270:1331669)    	chr16:31814074-45172831(probes 1331271:1331289)    	chr16:31814074-46197732(probes 1331271:1331671)    	0.17594	    0.17594		Actual Copy Change Given	0.0095883	0.004719	-0.011611	-0.015329	-0.35179	-0.17992	-0.0078863	4.4424	-0.0020784	0.066086	-0.022469	0.011958	-1.0332	-0.76419	-0.2642	-0.63254	-0.54482	-0.33214	-0.33756	-0.68524	0.46759	-0.0096806	0.091735	-0.14554	-0.017894	-0.71791	-0.011887	-0.026304	-0.20237	-0.81532	-0.021784	-0.011611	-0.023429	-0.019863	-0.029448	-0.02562	-9.5486e-06	-0.0081624	-0.24216	-0.78333	-0.47416	0.20457	0.063071	-0.023429	-0.0077354	-0.78597	1.7897	0.22545	-0.88766	-0.01849	-0.0026322	-0.64558	0.0052749	
Amplification Peak 14 - CN values	17q25.3	chr17:76596751-78239374(probes 1399255:1399466)    	chr17:77741560-78114380(probes 1399283:1399391)    	chr17:76469687-78774742(probes 1399204:1399666)    	0.10175	    0.10175		Actual Copy Change Given	0.49666	-0.15666	0.37364	-0.5066	-0.0081624	0.50047	0.78254	0.49459	-0.017529	0.76408	0.7379	0.03031	2.8303	-0.10439	1.4219	-0.013677	0.25464	0.27237	0.0075	0.60702	0.26797	-0.073209	0.05637	0.47873	0.64599	0.49009	-0.020138	0.12138	0.59008	-0.066461	0.35463	-0.070269	-0.016704	0.62479	1.3125	-0.089434	0.021594	-0.055499	-0.073251	-0.0051227	0.044867	0.30314	0.074693	-0.061286	-0.085047	-0.059135	2.6264	0.00065199	0.56845	-0.0077482	1.1251	0.0053861	0.67864	
Amplification Peak 15 - CN values	20q13.2	chr20:50693176-54369134(probes 1501080:1503980)    	chr20:53034176-53462922(probes 1502899:1503198)    	chr20:53034176-53465997(probes 1502899:1503201)    	0.21798	    0.21798		Actual Copy Change Given	0.56365	-0.0072792	0.3692	0.3715	-0.0046339	0.063652	-0.0047079	-0.041536	-0.011198	0.71829	0.0036076	0.010424	0.00013863	-0.010703	0.21745	-0.041159	0.004719	0.91865	-0.017254	-0.058466	0.33739	0.014162	4.0503	-0.038578	0.015041	-0.025346	0.40594	0.18465	0.19329	0.69634	1.3136	-0.017803	0.0039098	-0.0077482	-0.034768	-0.034768	0.016555	-0.021647	0.40844	0.1679	0.0030522	0.30314	0.091292	-0.023292	-0.026291	0.73758	0.34128	-0.0098185	-0.06142	-0.016841	0.056085	-0.13784	0.060936	
Deletion Peak  1 - CN values	1p36.23 	chr1:1-8309316(probes 1:2931)                         	chr1:7990016-8012814(probes 2785:2794)                	chr1:1-35401375(probes 1:16440)                      	7.7868e-08	 7.7868e-08		Actual Copy Change Given	0.020623	-0.019177	-0.39842	-0.036401	-0.36283	-0.70226	0.22561	-0.72615	-0.059871	-0.9257	-0.01849	0.0019418	-0.71158	0.70843	-0.39764	0.25543	-0.55857	-0.39742	-0.35556	-0.85464	-0.079077	-0.16955	-0.43268	0.13865	-0.014491	-0.77013	-0.44814	-0.17082	-0.40186	-0.86074	-0.81647	-0.75986	-0.19838	-0.040616	-0.80244	-0.061017	0.029034	-0.039801	-0.37155	-0.84139	-0.21342	-0.48271	-0.044966	-0.046041	-0.061273	-0.81461	-0.40351	-0.0022168	-0.12135	-0.15554	-0.8296	-0.6633	-0.0047079	
Deletion Peak  2 - CN values	1p33    	chr1:50652354-51210952(probes 24731:24966)          	chr1:50676371-51210952(probes 24735:24966)          	chr1:50897044-50908488(probes 24851:24852)          	0.19242	    0.19242		Actual Copy Change Given	0.018803	-0.0060904	-0.38962	0.023847	-0.36296	-0.039529	0.21975	1.6379	-0.0078063	-0.026689	-0.00041585	-0.005261	0.0081959	1.049	0.15636	-0.31459	-0.016017	-0.34718	0.0086135	-0.030267	0.024689	0.0070826	-0.40838	0.12682	0.011649	-0.047801	-0.8405	-0.13858	-0.34355	-0.83841	0.0076392	0.00597	-0.21007	-0.036674	-0.043195	-0.016704	-0.0016724	-0.0019399	0.036794	-0.79945	-0.20436	0.2749	-0.0087238	-0.0081624	-0.014215	-0.76227	-0.3311	-0.0022168	-0.06786	-0.0067739	0.41262	-0.30395	-0.33537	
Deletion Peak  3 - CN values	2p15    	chr2:62267493-207340787(probes 168481:243384)      	chr2:63666963-63710454(probes 169156:169173)        	chr2:63536650-63764657(probes 169095:169202)        	0.13818	    0.13818		Actual Copy Change Given	0.49147	-0.54078	0.33367	0.27631	-0.011611	0.54224	0.012655	0.0070826	-0.003376	-0.18572	-0.8567	-0.0020784	0.041175	-0.77307	0.078294	0.015308	0.019223	0.050108	0.0023581	0.0055529	-0.5425	0.03469	0.25261	-0.055499	0.045012	0.0083455	0	-0.010753	1.0748	0.0084743	-0.75098	-0.0055097	0.15233	-0.0081818	0.0068044	-0.0018014	-0.0072011	0	0.086088	0.037305	-0.046799	0.12697	0.72186	0.0015255	0.0087383	-0.0022168	-0.10605	0.353	-0.017123	0.0037465	0.3799	0.0059422	0.48135	
Deletion Peak  4 - CN values	2q23.1  	chr2:138435310-165520964(probes 204371:219777)    	chr2:148400433-148499247(probes 210162:210197)    	chr2:147688694-148867827(probes 209764:210378)    	0.027339	   0.027339		Actual Copy Change Given	0.46539	0.013772	0.33966	0.45445	-0.012989	0.0061146	-0.0023553	0.026092	0	-0.18358	-0.011198	-0.045838	0.045424	0.00063574	-0.014916	0.032563	0.024127	-0.028628	-0.00018371	0.036653	-0.4984	0.086233	0.27017	-0.052126	-1.081	0.060365	0.0080567	0.039054	0.052803	-0.8098	-0.38448	-0.0029422	0.15173	-0.68852	0.02525	-0.0011087	0.0034592	0.0097276	0.09159	0.054376	-0.046799	0.12064	-0.088648	0.014609	0.024421	0.026273	0.14147	0.3285	0.03031	0.0037465	0.39263	-0.017419	0.47804	
Deletion Peak  5 - CN values	2q34    	chr2:208838538-242951149(probes 244226:264000)    	chr2:211048901-211254287(probes 245482:245618)    	chr2:211130772-211250880(probes 245537:245616)    	0.017434	   0.017434		Actual Copy Change Given	0.46673	0.012097	0.34112	0.41249	-0.012162	-0.48208	-0.0036011	0.020343	0	-0.070536	0.99032	0.0020805	0.042004	0.020705	0.0063871	0.0034687	0.024127	-0.028628	0.0020805	0.032986	-0.54122	0.068726	-0.86492	-0.056835	-0.29484	0.04344	0.011818	0.2058	-0.42567	-0.013677	1.3792	-0.0022168	0.15459	-0.0050823	-0.76552	0.0029133	-0.00070257	0.023987	0.075991	0.033171	-0.037218	0.13007	-0.30205	0.0054139	-0.019027	0.021463	0.17091	0.3285	0.0041632	0.012097	0.39263	-0.037653	0.47976	
Deletion Peak  6 - CN values	3p21.1  	chr3:52547488-52919124(probes 295441:295587)        	chr3:52554049-52702296(probes 295444:295511)        	chr3:52603857-52856958(probes 295468:295557)        	0.088143	    0.09176		Actual Copy Change Given	-0.010508	0.0036076	-0.38246	-0.13005	0.019783	0.73606	0.012934	-0.005814	-0.020138	-0.025893	-0.91447	0.012097	-0.32472	0.7375	-0.83446	-0.65957	-0.53063	0.060222	-0.00097017	-0.76355	0	0.017544	-0.35726	0.13643	-0.012012	-0.053071	-0.46897	0.10804	-0.0023617	-0.0015243	0.28501	-0.013677	-0.1508	-0.71114	-0.0034627	0.019506	-0.013136	-0.01904	-0.36431	-0.093931	0.021603	0.42991	0.064931	0.0022193	-0.0081496	-0.0056918	0.028481	-0.2537	0.04259	-0.0084336	0.084354	-0.019962	0.036794	
Deletion Peak  7 - CN values	4q22.3  	chr4:76699973-123507109(probes 419013:445781)      	chr4:96978472-100463012(probes 431203:433014)      	chr4:79553041-110325497(probes 420894:438086)      	0.0031499	    0.09176		Actual Copy Change Given	-0.021921	-0.0071958	0.0029133	0.40661	0.023286	-0.63372	-0.81942	0.019223	0.0081959	-0.83373	-0.9177	-0.010508	-0.30004	0.002023	-0.28263	-0.63689	-0.0056811	-0.34595	-0.0024938	-0.6998	-0.5293	0.004719	-0.39608	-0.21552	0.05268	-0.62417	0.030451	-0.16815	-0.73135	0.031999	-0.78302	0	-0.0096806	0.0098669	-0.73926	0.44223	-0.020147	0.026373	-0.05496	-0.57595	-0.43547	-1.078	-0.71707	0.02511	0.022753	0.017544	-0.70001	-0.065447	0.040159	0.0049969	0.00027728	-0.62981	-0.71515	
Deletion Peak  8 - CN values	4q24    	chr4:1-191273063(probes 377682:483959)               	chr4:104729207-104861368(probes 435410:435464)    	chr4:79553041-110325497(probes 420894:438086)      	0.0031689	    0.77436		Actual Copy Change Given	-1.1217	-0.0071958	0.0029133	0.40661	0.023286	-0.63372	-0.81942	0.019223	0.0081959	-0.82619	-0.9177	-0.010508	-0.30004	0.021826	-0.28263	-0.63689	-0.0056811	-0.34595	-0.0024938	-0.69124	-0.5293	0.004719	-0.39018	-0.21552	0.05268	-0.62417	0.030451	-0.16815	-0.73135	-0.79645	-0.76903	0	-0.0096806	0.0098669	-0.72721	0.44223	-0.020147	0.026373	-0.05496	-0.57595	-0.43547	-0.15873	-0.71707	0.02511	0.037796	0.017544	-0.70001	-0.065447	0.040159	0.0049969	0.00027728	-0.62981	-0.71515	
Deletion Peak  9 - CN values	4q31.3  	chr4:151397952-152240226(probes 460578:460963)    	chr4:151403305-152162465(probes 460592:460933)    	chr4:151663443-151931368(probes 460697:460811)    	0.038028	    0.12018		Actual Copy Change Given	-0.089567	-0.011473	0.0029133	-0.03286	0.011818	-0.58726	-0.005814	-0.0011087	0.0081959	0.88535	0.0023581	0.011261	-0.28762	-0.00088908	-0.29367	-0.63662	-0.010646	-0.3432	-0.0031859	0.019363	-0.54585	-0.0085766	-0.40362	-0.22145	0.026948	-0.65379	-0.0023553	-0.17512	-0.75029	-0.79781	0.021744	-0.00097017	-0.011198	0.016565	0.0058309	0.43226	-0.022479	0.030889	-0.048613	-0.58157	-0.39141	-0.16497	-1.4719	0.022585	0.027921	0.010424	-0.69667	-0.065447	0.031436	0.0049969	0.011818	-0.5659	-0.71684	
Deletion Peak 10 - CN values	4q35.1  	chr4:1-191273063(probes 377682:483959)               	chr4:185783044-185985963(probes 481298:481381)    	chr4:175506290-191273063(probes 474506:483959)    	0.0026302	    0.25613		Actual Copy Change Given	-0.085192	-0.0018014	0.0038854	-0.46812	0.013213	-0.58503	-0.01904	-0.70061	-0.0031859	0.88086	-0.93836	-0.0092666	-0.31272	-0.0033817	-0.32019	-0.65882	-0.034631	-0.34561	-0.0030475	0.0070826	-0.56256	-0.34029	-0.41937	-0.20759	0.034126	-0.635	0.42991	-0.16891	-0.76532	-0.82211	1.3533	-0.0077976	-0.0066432	0.015727	0.013213	0.44359	-0.00056399	0.015727	-0.041159	-0.59954	-0.69342	-1.5	-0.73817	0.016425	0.00070617	-0.0069195	-0.74421	-0.081206	-0.015694	0.0084743	-0.03245	-0.62574	-0.72985	
Deletion Peak 11 - CN values	6q15    	chr6:44330865-170414665(probes 614561:686663)      	chr6:89844069-90663833(probes 637942:638418)        	chr6:82521340-94926462(probes 633739:641307)        	0.13818	    0.22392		Actual Copy Change Given	-0.039122	0.0081959	-0.7853	-0.87015	0.024969	0.0248	-0.020001	0.021043	-0.015967	0.029807	-0.0012473	-0.011887	0.067948	0.011621	0.062365	0.016985	-0.5351	-0.0033243	-0.083864	0.55567	-0.53673	0.018399	-0.75625	-0.22699	-0.71523	0.080024	-0.41773	-0.36353	0.40994	0.023706	-0.38313	0.012795	-0.17348	0.0040243	0.029325	-0.39441	-0.053485	-0.78395	-0.50401	-0.76244	-0.2056	-0.18873	0.021034	-0.81214	0.010716	-0.77804	-0.70872	-0.43314	0.15786	0.023286	-0.006505	-0.013292	-0.025893	
Deletion Peak 12 - CN values	6q26    	chr6:44330865-170899992(probes 614561:686881)      	chr6:161329463-161463410(probes 680871:680957)    	chr6:161407645-161410264(probes 680915:680916)    	0.16298	    0.20182		Actual Copy Change Given	-0.023566	-0.0089906	-0.80178	-0.0078863	0.015168	0.011121	-0.036946	-0.0096806	0.03214	0.0013868	0.058937	-0.046312	0.024689	-0.0036585	-0.077611	-0.021784	-0.56883	-0.039665	-0.07921	-0.79836	0.40913	-0.33191	-0.36476	-0.22158	-0.7495	0.02511	-0.43431	-0.37831	-0.2418	-0.010542	-0.42396	2.2334	-0.16784	-0.010784	-0.0049844	0.021744	-0.053485	-0.78395	0.56294	-0.79711	-0.2133	-0.15221	0.0022101	-0.84862	0.010716	-0.85312	-0.72411	-0.43235	0.091785	0.010842	-0.036674	-0.48787	-0.030404	
Deletion Peak 13 - CN values	7q34    	chr7:1-158821424(probes 686882:773192)               	chr7:138773909-138893422(probes 762294:762295)    	chr7:138775279-138896831(probes 762295:762296)    	0.24123	    0.25613		Actual Copy Change Given	-1.2468	0.011818	0.76389	0.40552	0.018103	-0.022881	0.74651	0.004719	0.021463	0.021868	0.0026357	0.10162	0.03863	-0.8054	-0.79469	-0.00027724	0.56259	-0.35829	0.01433	0.03031	1.2402	0.023706	0.003191	0.0097276	-0.010496	0.03214	0.0070357	-0.010784	0.055333	-0.0049844	-0.030813	0.68794	0.2801	-0.011887	-0.0031859	0.8298	-0.015751	0.69428	-0.11272	0.10906	0.039195	0.26075	-0.70602	-0.0041925	0.81729	-0.00069303	-0.31739	0.28089	-0.024388	0.27868	-0.0098185	0.0067767	0.069669	
Deletion Peak 14 - CN values	8p23.2  	chr8:2080589-6255647(probes 774191:776550)            	chr8:2771826-4954788(probes 774437:775391)            	chr8:3274513-3276262(probes 774915:774916)            	0.022767	   0.022462		Actual Copy Change Given	-0.61355	0.013911	0.001803	-0.48481	-0.74394	-0.6642	-0.79628	-0.068261	-0.062703	-0.074544	-0.0066432	-0.065581	-1.0919	-0.8407	-1.267	-0.33445	-0.03095	-0.7139	-0.39018	-0.75694	0.58112	-0.47902	-0.87377	-0.010094	-0.79184	-0.70235	-0.8368	-1.0116	0.27451	0.0044411	-0.79761	0.016705	-0.1025	0.018223	0.024969	0.43429	0.017115	-0.79319	-0.60603	0.030029	-0.47152	-0.83462	-0.73381	-0.82782	-0.90509	-0.019863	-1.1101	-0.039258	-0.0060904	-0.17841	-0.48607	-0.63559	0.41212	
Deletion Peak 15 - CN values	9p23    	chr9:7786330-12683402(probes 861784:864667)          	chr9:8300705-10626053(probes 862224:863817)          	chr9:9338398-9339566(probes 863021:863022)            	0.12242	    0.12184		Actual Copy Change Given	-0.58165	0.00083195	-0.13406	-0.44016	-0.27021	0.031155	-0.79845	0.017264	-0.0014439	0.00013863	0.0077783	0.0023581	-0.31937	-0.018547	0.16085	-0.62988	0.010424	0.021603	-0.0082329	-0.16115	0.54506	-0.067056	-0.37268	-0.018619	-0.33767	-0.64574	-0.031359	-0.17325	-0.29604	-0.80733	-0.36839	0.00458	0.0084743	0.0066653	-0.007472	0.008892	0.011112	-0.0032692	-0.044551	-0.083598	-0.45007	-0.15745	-0.72377	0.012795	0.0027874	0.019503	-0.71435	-0.22539	0.7862	-0.010784	-0.034417	-0.08999	-0.038442	
Deletion Peak 16 - CN values	9p21.3  	chr9:21020852-23680570(probes 871340:873018)        	chr9:21427580-21859078(probes 871608:871947)        	chr9:21398293-22974614(probes 871596:872519)        	0.04488	   0.046925		Actual Copy Change Given	-0.58165	0.010424	-0.13406	-0.42626	-0.63746	0.0065336	-0.79193	0.00732	-0.0014439	0	0.0070826	-0.025893	-0.31937	0.036312	0.16085	-0.62988	0.010424	-0.66864	0.0013868	-0.12421	0.53485	-0.067056	-0.37268	0.013353	-0.33767	-1.3888	-0.031359	-0.39486	-0.28573	-0.80733	-0.36	0.00458	0.0084743	0.0066653	0.010285	0.008892	0.0076326	0.0094491	-0.044551	-0.083598	-0.44685	-0.15745	-0.72377	0.012237	0.0027874	-0.76681	-0.71435	-0.22539	0.82921	-0.010784	-0.021373	-0.08999	-0.033269	
Deletion Peak 17 - CN values	9q31.1  	chr9:101620195-140273252(probes 903015:926610)    	chr9:102978829-103128640(probes 903796:903912)    	chr9:103061471-103064365(probes 903855:903856)    	0.17657	    0.22392		Actual Copy Change Given	0.010982	0.027778	-0.13471	-0.41946	-0.28025	-0.0013858	-0.78361	0.020623	-0.0042929	-0.0008316	-0.013402	-0.0069195	-0.33306	-0.015111	-0.30004	-0.63916	-0.17158	0.0041632	-0.0013858	0.57089	0.4681	-0.11508	-0.40086	0.0058309	-0.028889	-0.67417	-0.050506	-0.18911	-0.71524	-0.81958	-0.3764	-0.0076101	0.0098669	-0.0080244	0.0098669	-0.016704	0.0038758	-0.0053992	-0.080008	-0.10447	-0.22761	-0.11273	0.055933	-0.0078863	-0.010771	-0.014366	-0.72623	-0.36227	0.76408	-0.025346	-0.0061291	0.0049692	-0.019863	
Deletion Peak 18 - CN values	9q34.13 	chr9:1-140273252(probes 855383:926610)               	chr9:134755386-134814864(probes 925005:925131)    	chr9:134784988-134785075(probes 925069:925070)    	0.15068	    0.25613		Actual Copy Change Given	-0.0015243	-0.016017	-0.12343	-0.50598	-0.28025	-0.082477	-0.51774	-0.030131	-0.012438	-0.047395	0.0020805	0.0098669	-0.3471	-0.027318	-0.31611	-0.50805	-0.17917	-0.0229	-0.00013862	0.34892	0.4681	-0.16243	-0.42702	0.023987	-0.063745	-0.77124	-0.057441	-0.18911	-0.75271	-0.84789	-0.4065	-0.013677	0.0076392	-0.031905	-0.83519	-0.024524	0.0038758	-0.02151	-0.080008	-0.18546	-0.23129	-0.11273	0.035655	-0.013264	-0.063422	-0.014366	-0.77294	-0.36227	0.64763	-0.034359	-0.005261	0.0049692	-0.022195	
Deletion Peak 19 - CN values	10q23.31	chr10:88837980-90024018(probes 978677:979366)      	chr10:89607382-89725576(probes 978919:979122)      	chr10:89669369-89669428(probes 979021:979022)      	0.012515	   0.051476		Actual Copy Change Given	0.0034687	-0.51496	-0.38895	-0.42637	0.00083195	-0.028792	0.011958	-0.69664	0.026092	-1.4324	-0.0026322	0.012237	-0.30216	-1.2345	-0.35316	-0.0061039	-0.55538	-0.068395	0.00069327	-0.70487	-0.10248	-0.30569	0.2236	-0.23055	-0.71327	0.020343	-0.4209	-0.039122	-0.26841	-0.0096806	-0.37121	0.00069327	0.0030522	-0.017529	-0.0083005	-0.0047079	0.0080471	-0.0098185	0.1158	0.025952	0.00041593	0.0099474	-0.30699	0.0041632	-0.020811	-0.013127	0.088113	-0.21849	-0.86184	-0.0099565	-0.0060145	0.012627	-0.033814	
Deletion Peak 20 - CN values	10q26.2 	chr10:123231113-135374737(probes 1000608:1008355)	chr10:128574988-129146324(probes 1004325:1004747)	chr10:128809684-129166808(probes 1004482:1004767)	0.012098	   0.019034		Actual Copy Change Given	-0.0041546	-0.54683	-0.40429	-0.47527	0.004719	-0.017391	0.0095883	-0.76809	0.010424	-0.88928	-0.022195	0.016705	-0.34285	0.017066	-0.41234	-0.0061039	-0.58833	-0.19036	0.00069327	-0.16166	-0.25938	-0.36068	0.18419	-0.23055	-0.77203	-0.0083005	-0.0036239	-0.057385	-0.83196	-0.024179	-0.86444	-0.01612	0.0030522	-0.033405	-0.15362	-0.036265	0.0080471	-0.048342	0.30179	0.025952	-0.024388	0.04429	-0.36624	-0.038306	-0.020811	-0.013127	0.011539	-0.41236	-0.9306	-0.036265	-0.075612	-0.54039	-0.051181	
Deletion Peak 21 - CN values	11q14.1 	chr11:77555851-94349006(probes 1049255:1059938)    	chr11:82843294-85026442(probes 1052503:1053908)    	chr11:83911509-83917623(probes 1053206:1053207)    	0.096761	    0.14987		Actual Copy Change Given	-0.0022168	-0.52839	-0.37775	-0.0024938	-0.27559	0.027497	0.13687	-0.01849	-0.0099565	-0.051377	-0.013127	-0.0019788	-0.33906	0.026315	-0.30181	0.02525	0	-0.0011087	0.0012481	-0.75241	-0.56037	-0.0012473	-0.37775	-0.0055375	0.36315	-0.065581	0.010285	0.18177	-0.8177	0.0040243	0.017824	0.0091705	-0.1637	0.013353	-0.0077482	-0.017529	0.0040147	0.015727	-0.062617	-0.0029091	0.016705	-0.12797	-0.062638	-0.0037395	-0.014862	0.020483	-0.64743	0	0.036794	-0.0045695	-0.010094	0.025222	-0.0008316	
Deletion Peak 22 - CN values	11q24.3 	chr11:102421578-134452384(probes 1065567:1086967)	chr11:128308836-128320546(probes 1083033:1083042)	chr11:128298943-128321515(probes 1083022:1083044)	0.056755	    0.19242		Actual Copy Change Given	-0.0083005	-0.52839	-0.39129	-0.047936	-0.27597	-0.019735	0.12992	-0.01849	-0.013127	-0.086784	-0.012024	0.0114	-0.34572	-0.041623	-0.34859	0	0	-0.034223	-0.0016629	-1.0943	-0.57773	-0.053679	-0.40052	0.022304	0.32754	-0.12317	-0.0030345	0.19725	-0.83163	-0.029038	-0.016567	-0.0016629	-0.1637	-0.019452	-0.011473	-0.0034627	0.0040147	-0.011335	-0.050164	-0.0029091	0.016705	-0.12797	-0.062638	-0.0037395	-0.03421	-0.027808	-0.71814	0	-0.92503	-0.0045695	-0.052666	-0.019891	-0.01106	
Deletion Peak 23 - CN values	12q24.31	chr12:109829625-132349534(probes 1151423:1165153)	chr12:119684091-119830953(probes 1157955:1158054)	chr12:119720489-119824357(probes 1157983:1158049)	0.20028	    0.19242		Actual Copy Change Given	0.011121	-0.0034627	-0.0041546	-0.045499	-0.0098185	-0.045499	-0.0095426	0.018	-0.01849	-0.046583	-0.0069195	0	-0.0053992	-0.84182	-0.81663	0.0036076	-0.37245	0.001803	-0.007472	0.58095	0.39465	-0.1307	-0.016017	0.049256	-0.011047	-0.056442	-0.0024511	0.55584	0.060644	-0.023566	-0.82032	-0.74803	0.006109	-0.032661	-0.03504	-0.026988	0.0094395	-0.0062531	0.1634	-0.1731	0.013492	0.11756	-0.27524	-0.012438	-0.03121	-0.011198	-0.0041546	0.32005	-0.081656	-0.011611	0.0072217	-0.50797	0.016006	
Deletion Peak 24 - CN values	13q14.2 	chr13:47731768-47962808(probes 1184961:1185190)    	chr13:47773754-47958838(probes 1184984:1185188)    	chr13:47804497-47984169(probes 1185019:1185204)    	0.00030558	 0.00085033		Actual Copy Change Given	0.011679	-0.0092666	-0.39174	-0.43702	-0.0033243	-0.63812	-0.046854	-0.65501	0.0026357	-0.81055	-1.5	-0.11116	-0.32263	0.0061904	-1.1058	-0.11185	-0.5352	-0.93105	-0.36691	-0.73784	-0.52726	-0.25503	-0.35419	-0.086753	-0.90933	-0.62751	-0.82375	-0.0078863	-0.27117	0.0019418	-0.38201	0.006109	0.0022193	-0.0013858	0.022164	-0.0066432	0.0042926	0.014888	-0.15093	-0.00097017	-0.449	0.28237	0.034668	-0.008154	-0.0089778	-0.0030475	-0.62865	-0.37144	0.027497	0.0038854	-0.015879	-0.4511	-0.082269	
Deletion Peak 25 - CN values	13q14.3 	chr13:1-94080173(probes 1165154:1211968)           	chr13:49451053-49608579(probes 1185930:1185971)    	chr13:49421672-49612081(probes 1185916:1185973)    	0.024497	    0.20182		Actual Copy Change Given	-0.031223	-0.015466	-0.39174	-0.43702	0.00097064	-0.63812	-0.046854	-0.65501	0.0026357	-0.81055	-0.91582	-0.11116	-0.32263	0.0061904	-1.2779	-0.29236	-0.49965	-0.32182	-0.37144	-0.7324	-0.52726	-0.10158	-0.35749	-0.086753	-0.92394	-0.62751	-0.82375	-0.0078863	-0.27117	0.0019418	-1.5	0.0024969	0.0022193	-0.0013858	0.022164	-0.0066432	0.0042926	0.014888	-0.15093	-0.00097017	-0.449	0.28237	0.034668	-0.008154	0.0019729	-0.0030475	-0.62865	-0.37144	0.069095	0.0038854	-0.025421	-0.4511	-0.082269	
Deletion Peak 26 - CN values	13q32.3 	chr13:99428994-100055448(probes 1215423:1215736)  	chr13:99526231-99984056(probes 1215460:1215703)    	chr13:99783034-99787062(probes 1215582:1215583)    	0.066172	   0.062681		Actual Copy Change Given	-0.019819	-0.55086	-0.39408	-0.45929	-0.0024938	-0.65798	-0.056307	3.2539	0.02539	-0.0041754	-0.026714	-0.038021	-0.32915	0.012039	-0.82993	0.34356	-0.54861	0.89006	-0.3825	0.62916	-0.54613	0.08394	0.43142	0.068931	-0.18847	-0.61501	-0.84082	-0.0063668	0.16805	0.020063	0.34746	0.00083195	-0.00013862	0.010982	-0.0011212	-0.0066432	0.0048483	0.013598	-0.16777	0	-0.45843	0.28237	0.98416	-0.01406	0.008348	1.7892	-0.31622	-0.38213	0.022487	-0.012483	-0.057493	0.061908	-0.082269	
Deletion Peak 27 - CN values	14q31.3 	chr14:74536625-106368585(probes 1256169:1271377)  	chr14:88688902-88957936(probes 1265186:1265376)    	chr14:74976692-89413682(probes 1256453:1265689)    	0.0059411	  0.0059411		Actual Copy Change Given	0.00083195	-0.50422	-0.38761	-0.45779	0.0027745	-0.65741	-0.071071	-0.0011087	-0.044957	0.027638	-0.10421	0.0018179	-0.34561	-0.062685	-0.38616	-0.31926	-0.18974	-0.30289	0.00013863	-0.040209	-0.56734	-0.32774	-0.46281	0.11155	-0.22993	-0.041157	-0.40374	0.18177	-0.77337	-0.016704	-0.53943	-0.0024938	-0.33376	-0.021921	-0.016292	-0.018628	0.0026261	-0.0018014	-0.037354	0.017404	-0.46918	-0.37482	-0.72792	-0.83736	-0.0010958	0.0068044	-0.6726	0	-0.058462	-0.014959	-0.024798	-0.024962	0	
Deletion Peak 28 - CN values	16q24.2 	chr16:70485567-88827254(probes 1346119:1359598)    	chr16:86467782-88154394(probes 1358935:1359360)    	chr16:86410477-88175363(probes 1358926:1359368)    	0.059144	   0.056098		Actual Copy Change Given	0.021183	-0.0041546	-0.012162	-0.50411	-0.36861	-0.034768	-0.0029091	-0.79218	-0.03817	-0.19199	-0.077478	-0.0024734	-0.010094	-0.80778	-0.43951	-0.71212	-0.55717	-0.44329	-0.36079	-0.8807	-0.61133	-0.39819	-0.6537	-0.14939	0.43346	-0.75532	-0.016979	-0.035312	-0.81351	-0.87451	-0.045364	-0.097363	-0.020412	-0.079664	-0.074544	-0.024524	0.03016	-0.04577	-0.23349	-0.86413	-0.50241	0.35332	-0.7463	-0.059807	-0.096692	-0.85393	-0.69487	-0.079042	-0.98929	-0.066319	-0.052261	-0.6909	-0.76415	
Deletion Peak 29 - CN values	17p13.2 	chr17:1-4658761(probes 1359599:1361635)               	chr17:4038442-4119691(probes 1361381:1361428)        	chr17:4076549-4080867(probes 1361405:1361406)        	0.20077	    0.19242		Actual Copy Change Given	-0.55015	-0.51393	0.37545	-0.45715	-0.0029091	-0.079343	-0.79528	-0.042517	-0.018628	-0.84883	-0.89389	-0.11286	-0.70917	-0.074842	-0.82293	-0.65501	-0.33087	-0.36544	-0.35293	-0.78545	-0.60989	-0.32739	0.061222	-0.21552	-0.75232	-0.74976	-0.40285	-0.59468	-0.78109	-0.029448	-0.789	-0.74255	-0.0055375	-0.74534	-0.79803	-0.032723	0.013901	-0.020961	-0.053611	-0.81592	-0.46291	-0.54144	-0.74352	-0.0066432	-0.023827	-0.8117	-0.43724	-0.013953	-0.92646	-0.26685	-0.41476	-0.66607	-0.70244	
Deletion Peak 30 - CN values	17p11.2 	chr17:15832052-16062027(probes 1368676:1368772)    	chr17:15832482-16062027(probes 1368677:1368772)    	chr17:15851012-15858213(probes 1368685:1368686)    	0.095983	   0.092912		Actual Copy Change Given	-0.55015	-1.0227	0.37545	-0.47311	-0.0029091	-0.66504	-0.79269	-0.04211	-0.018628	-0.87861	-0.89266	-0.11286	-0.70917	-0.049751	-0.74603	-0.67518	1.0812	-0.36374	-0.33918	-0.77422	0.24809	-0.33871	0.061222	-0.21552	-0.71942	-1.4692	-0.40285	-0.58882	0.19953	-0.024388	-0.80353	-0.74255	-0.061129	-0.75245	-0.7777	-0.047124	0.0051263	-0.020961	-0.053611	-0.010232	-0.46291	-0.54144	-0.74918	-0.0066432	-0.023827	-0.8117	-0.43724	-0.013953	-0.86034	-0.26685	-0.41476	-0.66607	-0.68606	
Deletion Peak 31 - CN values	18q21.2 	chr18:46509167-46959369(probes 1426872:1427219)    	chr18:46574423-46770518(probes 1426912:1427037)    	chr18:46575551-46820327(probes 1426914:1427076)    	0.039499	   0.038451		Actual Copy Change Given	0.064244	0.00013863	0.0015255	-0.44739	0.0081534	0.010424	-0.79703	0.00097064	-0.029311	0.016146	0.0051472	-0.014228	-0.33156	-1.5	-0.31073	0.017544	0.022024	-0.0038779	-0.0083005	0.62133	-0.056517	-0.072124	0.30585	0.068943	0.016019	0.028622	-0.39664	0.20503	-0.76801	-0.81716	0.012376	0.0066502	-2.6184e-05	0.0114	0.030873	0.0034687	0.0045704	-0.017941	-0.048748	0.013632	0.0114	-0.16879	-0.30546	-0.0071958	-0.0084257	-0.0015243	-0.30532	0.25621	-0.025231	-0.019314	-0.01849	-0.008328	-0.07401	
Deletion Peak 32 - CN values	18q22.1 	chr18:50644442-76117153(probes 1429626:1445765)    	chr18:62319997-62428389(probes 1436792:1436846)    	chr18:62357027-62362543(probes 1436820:1436821)    	0.20308	    0.20182		Actual Copy Change Given	0.064244	0.012097	0.00083195	-0.42222	0.0081534	0.043582	0.016565	0.0086135	-0.03095	0.038913	-0.039258	-0.073076	-0.31867	-0.74233	-0.35236	0.040185	0.022024	0.03031	0.015168	0.70008	-0.0042929	0.029044	0.38171	0.050819	0.053677	0.028622	-0.39441	-0.59078	-0.77074	-0.77051	-0.7541	0.010564	-0.012438	0.015308	0.030591	-0.015466	0.0045704	-0.010094	-0.056846	0.037076	0.0114	-0.16879	-0.30393	-0.0071958	0.032999	-0.0077482	-0.31856	0.25621	0.038913	-0.019314	-0.035667	-0.039149	-0.07401	
Deletion Peak 33 - CN values	19p13.3 	chr19:6619605-6686925(probes 1446856:1446899)        	chr19:6620137-6673043(probes 1446857:1446894)        	chr19:1-6686925(probes 1445766:1446899)              	0.0075482	   0.012098		Actual Copy Change Given	0.051956	0.011679	0.37512	0.011539	-0.024935	-0.13574	-0.048883	-0.70596	0.0041632	-0.035993	-0.011473	-0.018902	-0.37741	-0.11644	0.041175	-1.4438	0.004253	0.30937	0.038913	-0.1517	-0.11822	-0.2565	-0.46515	0.16956	-0.043183	-0.093271	0.37775	0.1652	-0.77601	-0.0123	-0.046989	-0.020412	0.1592	-0.04726	-0.045364	0.28422	-0.00097971	-0.0024938	0.38171	-0.094328	-0.4407	-0.055499	-0.73854	-0.035585	-0.036389	-0.023292	-0.4197	-0.011749	-0.13484	-0.02562	0.017544	-0.23462	-0.070135	
Deletion Peak 34 - CN values	19p13.12	chr19:10621992-17905559(probes 1448499:1451984)    	chr19:15844972-15874337(probes 1451009:1451021)    	chr19:15845743-15880197(probes 1451010:1451025)    	0.12184	    0.16414		Actual Copy Change Given	0.051956	0.00458	0.37512	-0.032996	0.0016642	-0.076945	-0.01904	-1.5	0.016286	-0.017101	-0.011473	0.0072217	0.31562	-0.042166	0.089127	-0.3105	0.0033299	0.30937	0.034254	-0.1517	-0.11822	-0.22219	1.4718	0.16956	-0.043183	-0.093271	0.37249	0.1652	-0.76381	-0.0123	-0.038714	-0.020275	0.14548	-0.04726	-0.77634	0.319	-0.00097971	-0.0024938	0.40144	-0.086386	-0.44642	-0.055499	0.088538	-0.020687	-0.036389	-0.023292	-0.4197	-0.011749	-0.13497	0.0079175	0.017544	-0.16576	-0.029721	
Deletion Peak 35 - CN values	22q13.31	chr22:40804400-49691432(probes 1539623:1542142)    	chr22:45385177-49691432(probes 1542124:1542142)    	chr22:40816670-49691432(probes 1539628:1542142)    	0.024075	   0.022806		Actual Copy Change Given	0.017824	-0.03095	-0.38437	0.7181	0.015028	-0.67012	-0.029415	-0.085482	0.006109	-0.70244	-0.039529	-0.013264	0.35202	-0.62935	-1.4182	-0.05725	-0.41039	0.23024	-0.0019399	-0.18055	-0.65108	-0.3634	-0.7367	-0.19612	-0.18394	-0.14515	0.41095	0.04259	0.12387	-0.046312	0.054091	0.62752	-0.01354	-0.043873	-0.80997	-0.068261	0.019493	-0.04726	-0.056173	-0.010508	0.0068044	0.55177	0.03199	-0.048613	-0.083187	-0.080408	-0.344	-0.40241	-0.17215	-0.035448	-0.014366	0.52867	-0.019452	
