index	chromosome	region_start	region_end	peak_start	peak_end	enlarged_peak_start	enlarged_peak_end	n_genes_in_region	genes_in_region	n_genes_in_peak	genes_in_peak	n_genes_on_chip	genes_on_chip	top 3
1	1	144101527	161707910	148649433	148750140	121045616	151060047	159	hsa-mir-554,ARNT,BCL9,CTSK,CTSS,ECM1,ENSA,FCGR1A,FLG,FMO5,GJA5,GJA8,MCL1,PDZK1,PI4KB,PRKAB2,PSMB4,PSMD4,RFX5,RORC,S100A10,S100A11,VPS72,TCHH,TUFT1,HIST2H2AA3,HIST2H2AC,HIST2H2BE,HIST2H4A,PIP5K1A,ANXA9,ITGA10,PEX11B,SELENBP1,PRPF3,SEC22B,CHD1L,PDE4DIP,SETDB1,SV2A,RBM8A,SF3B4,PIAS3,SEMA6C,POLR3C,TXNIP,MTMR11,MLLT11,TDRKH,CD160,TNRC4,VPS45,POGZ,RPRD2,CA14,NBPF14,LCE2B,RNF115,TMOD4,LASS2,CRNN,BOLA1,APH1A,PLEKHO1,ACP6,GPR89B,OAZ3,MRPS21,ADAMTSL4,CRCT1,C1orf56,GOLPH3L,FAM63A,CDC42SE1,OTUD7B,CGN,ZNF687,PRUNE,MRPL9,SCNM1,TNFAIP8L2,C1orf54,TARS2,SNX27,ANP32E,HORMAD1,POLR3GL,LCE3D,GNRHR2,THEM4,GABPB2,TCHHL1,RPTN,HIST2H3C,LIX1L,C1orf51,HFE2,ANKRD35,BNIPL,PPIAL4A,PDIA3P,LCE4A,LOC200030,NUDT17,LCE5A,C1orf230,THEM5,NBPF15,ANKRD34A,HIST2H2AB,HIST2H3A,LINGO4,LCE1B,LCE1C,LCE1D,LCE1E,LCE1F,LCE2A,LCE2C,LCE2D,LCE3A,LCE3B,LCE3C,LCE3E,NOTCH2NL,FLJ39739,LOC388692,LYSMD1,HRNR,FLG2,NBPF20,HIST2H2BF,KPRP,HIST2H4B,PPIAL4G,PPIAL4D,LOC645166,PPIAL4B,GPR89A,PPIAL4C,HIST2H3D,MIR554,HIST2H2AA4,LOC728855,LOC728875,NBPF11,GPR89C,NBPF16,PDZK1P1,PPIAL4F,LOC728989,PPIAL4E,C1orf152,C1orf68,LOC100132111,NBPF10,FCGR1C,C2CD4D,LOC100286793,	3	ECM1,RPRD2,TARS2,	
2	1	62713504	62746383	62713504	62736312	58357156	63200422	19	CYP2J2,DAB1,JUN,TACSTD2,NFIA,USP1,INADL,ANGPTL3,HOOK1,L1TD1,FGGY,TM2D1,ATG4C,DOCK7,MYSM1,OMA1,C1orf87,KANK4,LOC729467,	1	DOCK7,	
3	3	173629596	173887845	173824593	173840193	168271992	199248630	209	hsa-mir-922,hsa-mir-570,hsa-mir-944,hsa-mir-28,hsa-mir-1248,hsa-mir-1224,hsa-mir-569,hsa-mir-551b,ACTL6A,AHSG,APOD,BCL6,BDH1,AP2M1,CLCN2,CPN2,CRYGS,DGKG,DLG1,DVL3,ECT2,EHHADH,EIF4A2,EIF4G1,EPHB3,ETV5,MECOM,FGF12,GHSR,GP5,HRG,HES1,IL1RAP,KNG1,LPP,MFI2,MUC4,NDUFB5,OPA1,CLDN11,PAK2,PCYT1A,SERPINI1,SERPINI2,PIK3CA,PLD1,POLR2H,PPP1R2,PRKCI,MASP1,PSMD2,RFC4,SNORA63,RPL35A,TRA2B,ST6GAL1,SKIL,SLC2A2,SOX2,SST,TERC,TFRC,THPO,SEC62,FXR1,TP63,CHRD,TNFSF10,EIF2B5,USP13,CLDN1,MAP3K13,ADIPOQ,KIAA0226,ECE2,ABCC5,TNK2,ALG3,KCNMB2,IGF2BP2,CLDN16,PDCD10,NLGN1,NCBP2,TNIK,MCF2L2,ATP11B,VPS8,ACAP2,UBXN7,GPR160,FETUB,LAMP3,KCNMB3,GOLIM4,ZNF639,PEX5L,DNAJB11,DCUN1D1,KLHL24,PIGX,TBCCD1,LEPREL1,ABCF3,LSG1,PARL,MFN1,YEATS2,MYNN,EIF5A2,MCCC1,HRASLS,MRPL47,NCEH1,SLC7A14,SENP2,GNB4,RTP4,MAGEF1,ZMAT3,FNDC3B,ATP13A3,TBL1XR1,ZBBX,LRRC31,MAP6D1,PHC3,PIGZ,SPATA16,B3GNT5,IQCG,ATP13A4,FYTTD1,ARPM1,MGC2889,LRCH3,C3orf34,LMLN,KLHL6,VWA5B2,TMEM41A,TMEM44,C3orf50,CAMK2N2,TM4SF19,RPL39L,DNAJC19,FAM131A,ZDHHC19,LRRC15,FAM43A,TMEM207,RTP1,TTC14,WDR49,LRRC34,C3orf59,C3orf21,CCDC50,PYDC2,LOC152217,RNF168,HTR3C,LIPH,HTR3D,RPL22L1,OSTalpha,FBXO45,MUC20,SENP5,LOC220729,NAALADL2,TCTEX1D2,C3orf43,SDHALP1,UTS2D,HTR3E,C3orf70,TPRG1,CCDC39,LRRIQ4,SAMD7,RTP2,OSTN,ATP13A5,SOX2OT,WDR53,LOC348840,LRRC33,TMEM212,FLJ42393,SNORD2,SNORA4,C3orf65,LOC647309,SNORA81,SNORD66,MIR551B,MIR569,MIR570,SDHALP2,FAM157A,MIR922,MIR944,LOC100128023,LOC100128164,LOC100131551,SNAR-I,MIR1224,	1	NCEH1,	
4	5	357462	7452972	634053	654268	395730	936065	10	SLC9A3,TPPP,EXOC3,LOC25845,CEP72,AHRR,BRD9,ZDHHC11,C5orf55,LOC100310782,	4	TPPP,CEP72,BRD9,ZDHHC11,	
5	5	35867501	39716234	39623467	39698830	35866196	39715171	23	hsa-mir-580,C9,DAB2,FYB,GDNF,IL7R,LIFR,SKP2,SLC1A3,OSMR,NUP155,NIPBL,WDR70,C5orf42,LMBRD2,EGFLAM,C5orf33,UGT3A1,CAPSL,UGT3A2,RANBP3L,RICTOR,MIR580,	0	[DAB2]	
6	7	52577828	57206108	54748717	54893134	54518804	56358686	18	CCT6A,EGFR,GBAS,PHKG1,PSPH,SEC61G,SUMF2,CHCHD2,MRPS17,LANCL2,VOPP1,VSTM2A,SEPT14,ZNF713,FKBP9L,LOC389493,LOC442308,SNORA15,	1	SEC61G,	
7	7	19222482	19650544	19222482	19358611	16581315	20584736	16	hsa-mir-1302-6,AHR,ITGB8,TWIST1,HDAC9,AGR2,SNX13,TSPAN13,BZW2,ANKMY2,AGR3,PRPS1L1,TWISTNB,FERD3L,TMEM196,MACC1,	0	[FERD3L]	
8	7	115858553	116243375	116114258	116238091	114918887	116908456	14	CAPZA2,CAV1,CAV2,CFTR,MET,WNT2,ST7,TFEC,TES,ST7OT1,ST7OT2,ST7OT3,ASZ1,ST7OT4,	1	MET,	
9	8	124243823	139277031	129240264	129240678	129180096	129264032	2	hsa-mir-1208,PVT1,	0	[hsa-mir-1208]	
10	8	37255302	43334397	42218517	42222479	41460222	42940835	21	hsa-mir-486,ANK1,CHRNB3,IKBKB,PLAT,POLB,SLC20A2,VDAC3,MYST3,CHRNA6,AP3M2,DKK4,GOLGA7,THAP1,RNF170,GINS4,HOOK3,C8orf40,AGPAT6,NKX6-3,MIR486,	0	[IKBKB]	
11	11	67861024	70141465	69048798	69232730	68045816	69240606	13	CCND1,CPT1A,IGHMBP2,MTL5,FGF19,MYEOV,GAL,SAPS3,MRGPRD,MRGPRF,MRPL21,TPCN2,ORAOV1,	3	CCND1,FGF19,ORAOV1,	
12	12	55325396	70927636	67507897	67524002	67499098	67770496	2	CPM,MDM2,	1	MDM2,	
13	12	20594662	27932523	26071475	26096646	25041779	27317746	16	ITPR2,KRAS,LRMP,SSPN,MED21,RASSF8,STK38L,FGFR1OP2,TM7SF3,CASC1,C12orf11,BHLHE41,LYRM5,IFLTD1,C12orf77,C12orf71,	1	RASSF8,	
14	14	25884384	44049132	35027813	35075426	35018769	35136254	2	INSM2,RALGAPA1,	2	INSM2,RALGAPA1,	
15	17	34925854	35278943	35122214	35130424	33007030	36950590	113	CACNB1,CDC6,CCR7,CSF3,ERBB2,GRB7,IGFBP4,KRT10,KRT12,KRT13,KRT15,KRT19,KRT31,KRT32,KRT33A,KRT33B,KRT34,KRT35,LASP1,MLLT6,NEUROD2,PNMT,MED1,PSMB3,PSMD3,RARA,RPL19,SMARCE1,HNF1B,THRA,TOP2A,PCGF2,PIP4K2B,TCAP,KRT38,KRT37,KRT36,RPL23,NR1D1,MED24,STARD3,DDX52,SYNRG,CASC3,IKZF3,KRT23,SOCS7,RAPGEFL1,CRKRS,KRT20,CCDC49,GSDMB,PLXDC1,ARHGAP23,SNIP,KRTAP1-3,KRTAP1-1,KRTAP9-9,KRTAP2-1,KRTAP4-12,KRTAP1-5,KRTAP3-1,KRTAP3-2,KRTAP9-2,KRTAP9-3,KRTAP9-8,KRTAP17-1,PPP1R1B,TBC1D3F,C17orf37,MRPL45,KRTAP4-4,TNS4,FBXL20,KRTAP9-4,KRTAP4-1,KRTAP4-5,KRTAP4-3,KRTAP4-2,KRTAP3-3,KRTAP2-4,LOC90110,PGAP3,ORMDL3,ZPBP2,GJD3,KRT222,KRT40,WIPF2,KRT25,TMEM99,KRT28,KRT24,LOC284100,CISD3,GSDMA,MSL1,KRT27,STAC2,KRT26,C17orf98,ARL5C,KRT39,GPR179,FBXO47,SNORA21,KRTAP4-11,KRTAP4-8,TBC1D3,SNORD124,KRTAP4-9,KRTAP4-7,C17orf96,	1	ERBB2,	
16	18	20622609	20771027	20622609	20766349	20619428	20769074	0	[ZNF521]	0	[ZNF521]	
17	19	33209027	42784191	37942863	37963179	34180216	41262236	96	APLP1,ATP4A,CCNE1,CD22,CEBPA,CEBPG,COX6B1,ETV2,GPI,FFAR1,FFAR3,FFAR2,HPN,LRP3,MAG,NPHS1,PEPD,FXYD1,FXYD3,SCN1B,TYROBP,UQCRFS1,USF2,C19orf2,PDCD5,KIAA0355,ZNF536,MLL4,UBA2,TMEM147,POP4,HCST,UPK1A,SLC7A9,ZNF507,HAUS5,CLIP3,LSM14A,GAPDHS,ZBTB32,LSR,FXYD7,FXYD5,GPATCH1,PSENEN,ZNF302,LIN37,SLC7A10,TSHZ3,GRAMD1A,HAMP,PRODH2,CHST8,KCTD15,PLEKHF1,RBM42,LRFN3,TMEM149,LOC80054,C19orf12,KIRREL2,ANKRD27,PDCD2L,NFKBID,CCDC123,ALKBH6,RHPN2,ZNF30,C19orf40,TDRD12,DMKN,DKFZp566F0947,SNX26,WDR88,WTIP,ZNF792,HSPB6,DPY19L3,ZNF599,FAM187B,C19orf55,LGI4,C19orf46,THAP8,U2AF1L4,SCGBL,WDR62,ZNF181,VSTM2B,SBSN,RGS9BP,KRTDAP,NUDT19,LOC643719,SDHAF1,LOC100128675,	1	TDRD12,	
18	20	51303743	52828024	51919826	51981226	51607302	52062211	3	ZNF217,BCAS1,SUMO1P1,	1	SUMO1P1,	
19	20	60891964	62382907	62360926	62382907	60956410	62382907	55	hsa-mir-647,hsa-mir-124-3,CHRNA4,EEF1A2,NPBWR2,KCNQ2,MYT1,OPRL1,PTK6,SRMS,TCEA2,TPD52L2,TNFRSF6B,ARFRP1,RGS19,TCFL5,DIDO1,PRPF6,GMEB2,STMN3,RTEL1,SOX18,YTHDF1,LIME1,UCKL1,C20orf11,PCMTD2,ARFGAP1,SLC2A4RG,ZNF512B,COL20A1,SLC17A9,C20orf195,PPDPF,BIRC7,DNAJC5,ZGPAT,PRIC285,BHLHE23,NKAIN4,ZBTB46,SAMD10,C20orf135,C20orf201,NCRNA00176,MIR124-3,MIR647,HAR1A,HAR1B,UCKL1AS,MIR941-1,MIR941-2,MIR941-3,NCRNA00029,FLJ16779,	1	PCMTD2,	
