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fh_MutSigPreprocess
-i
OV
-b
hg18
-t
/xchip/cga1/lawrence/capture/RefSeq_exons_hg18_june2010_fix1.txt
-c
/xchip/cga1/lawrence/db/context65
-cw
/xchip/cga1/lawrence/db/context65/RefSeq_exons_hg18_june2010_terr_only.wig
-cat
4
-maf1
/xchip/tcga/gdac_prod/applications/tcga-gdac-genepattern/gp-3.2.4-9272/temp/attachments/cgaadm_deadline/Axis1603589019805797990.att_dependentsValues6255852515212334605.tsv
-maf2
/xchip/tcga/gdac_prod/applications/tcga-gdac-genepattern/gp-3.2.4-9272/temp/attachments/cgaadm_deadline/Axis2934168900587697565.att_dependentsValues5746295141951644772.tsv
-maf3
/xchip/tcga/gdac_prod/applications/tcga-gdac-genepattern/gp-3.2.4-9272/temp/attachments/cgaadm_deadline/Axis5946378353197647577.att_dependentsValues3841058003365010492.tsv
-maflabel1
Broad
-maflabel2
WashU
-maflabel3
Baylor
-wig1
/xchip/tcga/gdac_prod/applications/tcga-gdac-genepattern/gp-3.2.4-9272/temp/attachments/cgaadm_deadline/Axis2974210169314268277.att_dependentsValues58081437473883122.tsv
-wig2
/xchip/tcga/gdac_prod/applications/tcga-gdac-genepattern/gp-3.2.4-9272/temp/attachments/cgaadm_deadline/Axis4865342128075767772.att_dependentsValues590886876094437563.tsv
-wig3
/xchip/tcga/gdac_prod/applications/tcga-gdac-genepattern/gp-3.2.4-9272/temp/attachments/cgaadm_deadline/Axis1801401541423636068.att_dependentsValues4011045323142286039.tsv
-p
/xchip/cga1/reference/mutsig_params/MutSig1.5.params.txt

               perform_mutsig2_analysis: 0
     use_sample_specific_mutation_rates: 1
        analyze_silent_nonsilent_ratios: 1
                 sig_calculation_method: 'projection'
                  clip_tumor_from_names: 1
                                  build: 'hg18'
    consolidate_adjacent_muts_threshold: 1
             remove_noncoding_mutations: 1
                    enforce_target_list: 0
                            target_list: [1x64 char]
                     mutation_blacklist: []
                     mutation_whitelist: []

Loading MAFs for Broad
Loaded /xchip/gdac_data/normalized/diced/ov/tracerel__illuminaga_dnaseq__broad_mit_edu__Level_2__Mutation_Calling__maf/broad.mit.edu_OV.IlluminaGA_DNASeq.Level_2.1.5.0/TCGA-04-1331-01.maf.txt
Loaded /xchip/gdac_data/normalized/diced/ov/tracerel__illuminaga_dnaseq__broad_mit_edu__Level_2__Mutation_Calling__maf/broad.mit.edu_OV.IlluminaGA_DNASeq.Level_2.1.5.0/TCGA-04-1342-01.maf.txt
Loaded /xchip/gdac_data/normalized/diced/ov/tracerel__illuminaga_dnaseq__broad_mit_edu__Level_2__Mutation_Calling__maf/broad.mit.edu_OV.IlluminaGA_DNASeq.Level_2.1.5.0/TCGA-04-1356-01.maf.txt
Loaded /xchip/gdac_data/normalized/diced/ov/tracerel__illuminaga_dnaseq__broad_mit_edu__Level_2__Mutation_Calling__maf/broad.mit.edu_OV.IlluminaGA_DNASeq.Level_2.1.5.0/TCGA-04-1357-01.maf.txt
Loaded /xchip/gdac_data/normalized/diced/ov/tracerel__illuminaga_dnaseq__broad_mit_edu__Level_2__Mutation_Calling__maf/broad.mit.edu_OV.IlluminaGA_DNASeq.Level_2.1.5.0/TCGA-04-1367-01.maf.txt
Loaded /xchip/gdac_data/normalized/diced/ov/tracerel__illuminaga_dnaseq__broad_mit_edu__Level_2__Mutation_Calling__maf/broad.mit.edu_OV.IlluminaGA_DNASeq.Level_2.1.5.0/TCGA-09-2044-01.maf.txt
Loaded /xchip/gdac_data/normalized/diced/ov/tracerel__illuminaga_dnaseq__broad_mit_edu__Level_2__Mutation_Calling__maf/broad.mit.edu_OV.IlluminaGA_DNASeq.Level_2.1.5.0/TCGA-09-2045-01.maf.txt
Loaded /xchip/gdac_data/normalized/diced/ov/tracerel__illuminaga_dnaseq__broad_mit_edu__Level_2__Mutation_Calling__maf/broad.mit.edu_OV.IlluminaGA_DNASeq.Level_2.1.5.0/TCGA-09-2049-01.maf.txt
Loaded /xchip/gdac_data/normalized/diced/ov/tracerel__illuminaga_dnaseq__broad_mit_edu__Level_2__Mutation_Calling__maf/broad.mit.edu_OV.IlluminaGA_DNASeq.Level_2.1.5.0/TCGA-09-2050-01.maf.txt
Loaded /xchip/gdac_data/normalized/diced/ov/tracerel__illuminaga_dnaseq__broad_mit_edu__Level_2__Mutation_Calling__maf/broad.mit.edu_OV.IlluminaGA_DNASeq.Level_2.1.5.0/TCGA-09-2051-01.maf.txt
Loaded /xchip/gdac_data/normalized/diced/ov/tracerel__illuminaga_dnaseq__broad_mit_edu__Level_2__Mutation_Calling__maf/broad.mit.edu_OV.IlluminaGA_DNASeq.Level_2.1.5.0/TCGA-09-2053-01.maf.txt
Loaded /xchip/gdac_data/normalized/diced/ov/tracerel__illuminaga_dnaseq__broad_mit_edu__Level_2__Mutation_Calling__maf/broad.mit.edu_OV.IlluminaGA_DNASeq.Level_2.1.5.0/TCGA-09-2056-01.maf.txt
Loaded /xchip/gdac_data/normalized/diced/ov/tracerel__illuminaga_dnaseq__broad_mit_edu__Level_2__Mutation_Calling__maf/broad.mit.edu_OV.IlluminaGA_DNASeq.Level_2.1.5.0/TCGA-10-0926-01.maf.txt
Loaded /xchip/gdac_data/normalized/diced/ov/tracerel__illuminaga_dnaseq__broad_mit_edu__Level_2__Mutation_Calling__maf/broad.mit.edu_OV.IlluminaGA_DNASeq.Level_2.1.5.0/TCGA-10-0931-01.maf.txt
Loaded /xchip/gdac_data/normalized/diced/ov/tracerel__illuminaga_dnaseq__broad_mit_edu__Level_2__Mutation_Calling__maf/broad.mit.edu_OV.IlluminaGA_DNASeq.Level_2.1.5.0/TCGA-10-0934-01.maf.txt
Loaded /xchip/gdac_data/normalized/diced/ov/tracerel__illuminaga_dnaseq__broad_mit_edu__Level_2__Mutation_Calling__maf/broad.mit.edu_OV.IlluminaGA_DNASeq.Level_2.1.5.0/TCGA-13-0751-01.maf.txt
Loaded /xchip/gdac_data/normalized/diced/ov/tracerel__illuminaga_dnaseq__broad_mit_edu__Level_2__Mutation_Calling__maf/broad.mit.edu_OV.IlluminaGA_DNASeq.Level_2.1.5.0/TCGA-13-0883-01.maf.txt
Loaded /xchip/gdac_data/normalized/diced/ov/tracerel__illuminaga_dnaseq__broad_mit_edu__Level_2__Mutation_Calling__maf/broad.mit.edu_OV.IlluminaGA_DNASeq.Level_2.1.5.0/TCGA-13-0886-01.maf.txt
Loaded /xchip/gdac_data/normalized/diced/ov/tracerel__illuminaga_dnaseq__broad_mit_edu__Level_2__Mutation_Calling__maf/broad.mit.edu_OV.IlluminaGA_DNASeq.Level_2.1.5.0/TCGA-13-0891-01.maf.txt
Loaded /xchip/gdac_data/normalized/diced/ov/tracerel__illuminaga_dnaseq__broad_mit_edu__Level_2__Mutation_Calling__maf/broad.mit.edu_OV.IlluminaGA_DNASeq.Level_2.1.5.0/TCGA-13-0899-01.maf.txt
Loaded /xchip/gdac_data/normalized/diced/ov/tracerel__illuminaga_dnaseq__broad_mit_edu__Level_2__Mutation_Calling__maf/broad.mit.edu_OV.IlluminaGA_DNASeq.Level_2.1.5.0/TCGA-13-0904-01.maf.txt
Loaded /xchip/gdac_data/normalized/diced/ov/tracerel__illuminaga_dnaseq__broad_mit_edu__Level_2__Mutation_Calling__maf/broad.mit.edu_OV.IlluminaGA_DNASeq.Level_2.1.5.0/TCGA-13-0905-01.maf.txt
Loaded /xchip/gdac_data/normalized/diced/ov/tracerel__illuminaga_dnaseq__broad_mit_edu__Level_2__Mutation_Calling__maf/broad.mit.edu_OV.IlluminaGA_DNASeq.Level_2.1.5.0/TCGA-13-0911-01.maf.txt
Loaded /xchip/gdac_data/normalized/diced/ov/tracerel__illuminaga_dnaseq__broad_mit_edu__Level_2__Mutation_Calling__maf/broad.mit.edu_OV.IlluminaGA_DNASeq.Level_2.1.5.0/TCGA-13-0913-01.maf.txt
Loaded /xchip/gdac_data/normalized/diced/ov/tracerel__illuminaga_dnaseq__broad_mit_edu__Level_2__Mutation_Calling__maf/broad.mit.edu_OV.IlluminaGA_DNASeq.Level_2.1.5.0/TCGA-13-0916-01.maf.txt
Loaded /xchip/gdac_data/normalized/diced/ov/tracerel__illuminaga_dnaseq__broad_mit_edu__Level_2__Mutation_Calling__maf/broad.mit.edu_OV.IlluminaGA_DNASeq.Level_2.1.5.0/TCGA-13-0923-01.maf.txt
Loaded /xchip/gdac_data/normalized/diced/ov/tracerel__illuminaga_dnaseq__broad_mit_edu__Level_2__Mutation_Calling__maf/broad.mit.edu_OV.IlluminaGA_DNASeq.Level_2.1.5.0/TCGA-13-1409-01.maf.txt
Loaded /xchip/gdac_data/normalized/diced/ov/tracerel__illuminaga_dnaseq__broad_mit_edu__Level_2__Mutation_Calling__maf/broad.mit.edu_OV.IlluminaGA_DNASeq.Level_2.1.5.0/TCGA-13-1410-01.maf.txt
Loaded /xchip/gdac_data/normalized/diced/ov/tracerel__illuminaga_dnaseq__broad_mit_edu__Level_2__Mutation_Calling__maf/broad.mit.edu_OV.IlluminaGA_DNASeq.Level_2.1.5.0/TCGA-13-1477-01.maf.txt
Loaded /xchip/gdac_data/normalized/diced/ov/tracerel__illuminaga_dnaseq__broad_mit_edu__Level_2__Mutation_Calling__maf/broad.mit.edu_OV.IlluminaGA_DNASeq.Level_2.1.5.0/TCGA-13-1484-01.maf.txt
Loaded /xchip/gdac_data/normalized/diced/ov/tracerel__illuminaga_dnaseq__broad_mit_edu__Level_2__Mutation_Calling__maf/broad.mit.edu_OV.IlluminaGA_DNASeq.Level_2.1.5.0/TCGA-13-1487-01.maf.txt
Loaded /xchip/gdac_data/normalized/diced/ov/tracerel__illuminaga_dnaseq__broad_mit_edu__Level_2__Mutation_Calling__maf/broad.mit.edu_OV.IlluminaGA_DNASeq.Level_2.1.5.0/TCGA-13-1492-01.maf.txt
Loaded /xchip/gdac_data/normalized/diced/ov/tracerel__illuminaga_dnaseq__broad_mit_edu__Level_2__Mutation_Calling__maf/broad.mit.edu_OV.IlluminaGA_DNASeq.Level_2.1.5.0/TCGA-13-1494-01.maf.txt
Loaded /xchip/gdac_data/normalized/diced/ov/tracerel__illuminaga_dnaseq__broad_mit_edu__Level_2__Mutation_Calling__maf/broad.mit.edu_OV.IlluminaGA_DNASeq.Level_2.1.5.0/TCGA-13-1495-01.maf.txt
Loaded /xchip/gdac_data/normalized/diced/ov/tracerel__illuminaga_dnaseq__broad_mit_edu__Level_2__Mutation_Calling__maf/broad.mit.edu_OV.IlluminaGA_DNASeq.Level_2.1.5.0/TCGA-13-1496-01.maf.txt
Loaded /xchip/gdac_data/normalized/diced/ov/tracerel__illuminaga_dnaseq__broad_mit_edu__Level_2__Mutation_Calling__maf/broad.mit.edu_OV.IlluminaGA_DNASeq.Level_2.1.5.0/TCGA-13-1501-01.maf.txt
Loaded /xchip/gdac_data/normalized/diced/ov/tracerel__illuminaga_dnaseq__broad_mit_edu__Level_2__Mutation_Calling__maf/broad.mit.edu_OV.IlluminaGA_DNASeq.Level_2.1.5.0/TCGA-13-1504-01.maf.txt
Loaded /xchip/gdac_data/normalized/diced/ov/tracerel__illuminaga_dnaseq__broad_mit_edu__Level_2__Mutation_Calling__maf/broad.mit.edu_OV.IlluminaGA_DNASeq.Level_2.1.5.0/TCGA-13-1505-01.maf.txt
Loaded /xchip/gdac_data/normalized/diced/ov/tracerel__illuminaga_dnaseq__broad_mit_edu__Level_2__Mutation_Calling__maf/broad.mit.edu_OV.IlluminaGA_DNASeq.Level_2.1.5.0/TCGA-13-1510-01.maf.txt
Loaded /xchip/gdac_data/normalized/diced/ov/tracerel__illuminaga_dnaseq__broad_mit_edu__Level_2__Mutation_Calling__maf/broad.mit.edu_OV.IlluminaGA_DNASeq.Level_2.1.5.0/TCGA-13-1512-01.maf.txt
Loaded /xchip/gdac_data/normalized/diced/ov/tracerel__illuminaga_dnaseq__broad_mit_edu__Level_2__Mutation_Calling__maf/broad.mit.edu_OV.IlluminaGA_DNASeq.Level_2.1.5.0/TCGA-13-2060-01.maf.txt
Loaded /xchip/gdac_data/normalized/diced/ov/tracerel__illuminaga_dnaseq__broad_mit_edu__Level_2__Mutation_Calling__maf/broad.mit.edu_OV.IlluminaGA_DNASeq.Level_2.1.5.0/TCGA-20-0987-01.maf.txt
Loaded /xchip/gdac_data/normalized/diced/ov/tracerel__illuminaga_dnaseq__broad_mit_edu__Level_2__Mutation_Calling__maf/broad.mit.edu_OV.IlluminaGA_DNASeq.Level_2.1.5.0/TCGA-20-0990-01.maf.txt
Loaded /xchip/gdac_data/normalized/diced/ov/tracerel__illuminaga_dnaseq__broad_mit_edu__Level_2__Mutation_Calling__maf/broad.mit.edu_OV.IlluminaGA_DNASeq.Level_2.1.5.0/TCGA-20-0991-01.maf.txt
Loaded /xchip/gdac_data/normalized/diced/ov/tracerel__illuminaga_dnaseq__broad_mit_edu__Level_2__Mutation_Calling__maf/broad.mit.edu_OV.IlluminaGA_DNASeq.Level_2.1.5.0/TCGA-23-1027-01.maf.txt
Loaded /xchip/gdac_data/normalized/diced/ov/tracerel__illuminaga_dnaseq__broad_mit_edu__Level_2__Mutation_Calling__maf/broad.mit.edu_OV.IlluminaGA_DNASeq.Level_2.1.5.0/TCGA-23-1030-01.maf.txt
Loaded /xchip/gdac_data/normalized/diced/ov/tracerel__illuminaga_dnaseq__broad_mit_edu__Level_2__Mutation_Calling__maf/broad.mit.edu_OV.IlluminaGA_DNASeq.Level_2.1.5.0/TCGA-23-1031-01.maf.txt
Loaded /xchip/gdac_data/normalized/diced/ov/tracerel__illuminaga_dnaseq__broad_mit_edu__Level_2__Mutation_Calling__maf/broad.mit.edu_OV.IlluminaGA_DNASeq.Level_2.1.5.0/TCGA-23-1032-01.maf.txt
Loaded /xchip/gdac_data/normalized/diced/ov/tracerel__illuminaga_dnaseq__broad_mit_edu__Level_2__Mutation_Calling__maf/broad.mit.edu_OV.IlluminaGA_DNASeq.Level_2.1.5.0/TCGA-23-1110-01.maf.txt
Loaded /xchip/gdac_data/normalized/diced/ov/tracerel__illuminaga_dnaseq__broad_mit_edu__Level_2__Mutation_Calling__maf/broad.mit.edu_OV.IlluminaGA_DNASeq.Level_2.1.5.0/TCGA-23-1116-01.maf.txt
Loaded /xchip/gdac_data/normalized/diced/ov/tracerel__illuminaga_dnaseq__broad_mit_edu__Level_2__Mutation_Calling__maf/broad.mit.edu_OV.IlluminaGA_DNASeq.Level_2.1.5.0/TCGA-23-1122-01.maf.txt
Loaded /xchip/gdac_data/normalized/diced/ov/tracerel__illuminaga_dnaseq__broad_mit_edu__Level_2__Mutation_Calling__maf/broad.mit.edu_OV.IlluminaGA_DNASeq.Level_2.1.5.0/TCGA-23-2072-01.maf.txt
Loaded /xchip/gdac_data/normalized/diced/ov/tracerel__illuminaga_dnaseq__broad_mit_edu__Level_2__Mutation_Calling__maf/broad.mit.edu_OV.IlluminaGA_DNASeq.Level_2.1.5.0/TCGA-23-2077-01.maf.txt
Loaded /xchip/gdac_data/normalized/diced/ov/tracerel__illuminaga_dnaseq__broad_mit_edu__Level_2__Mutation_Calling__maf/broad.mit.edu_OV.IlluminaGA_DNASeq.Level_2.1.5.0/TCGA-23-2078-01.maf.txt
Loaded /xchip/gdac_data/normalized/diced/ov/tracerel__illuminaga_dnaseq__broad_mit_edu__Level_2__Mutation_Calling__maf/broad.mit.edu_OV.IlluminaGA_DNASeq.Level_2.1.5.0/TCGA-23-2079-01.maf.txt
Loaded /xchip/gdac_data/normalized/diced/ov/tracerel__illuminaga_dnaseq__broad_mit_edu__Level_2__Mutation_Calling__maf/broad.mit.edu_OV.IlluminaGA_DNASeq.Level_2.1.5.0/TCGA-23-2081-01.maf.txt
Loaded /xchip/gdac_data/normalized/diced/ov/tracerel__illuminaga_dnaseq__broad_mit_edu__Level_2__Mutation_Calling__maf/broad.mit.edu_OV.IlluminaGA_DNASeq.Level_2.1.5.0/TCGA-24-0970-01.maf.txt
Loaded /xchip/gdac_data/normalized/diced/ov/tracerel__illuminaga_dnaseq__broad_mit_edu__Level_2__Mutation_Calling__maf/broad.mit.edu_OV.IlluminaGA_DNASeq.Level_2.1.5.0/TCGA-24-0975-01.maf.txt
Loaded /xchip/gdac_data/normalized/diced/ov/tracerel__illuminaga_dnaseq__broad_mit_edu__Level_2__Mutation_Calling__maf/broad.mit.edu_OV.IlluminaGA_DNASeq.Level_2.1.5.0/TCGA-24-0979-01.maf.txt
Loaded /xchip/gdac_data/normalized/diced/ov/tracerel__illuminaga_dnaseq__broad_mit_edu__Level_2__Mutation_Calling__maf/broad.mit.edu_OV.IlluminaGA_DNASeq.Level_2.1.5.0/TCGA-24-1419-01.maf.txt
Loaded /xchip/gdac_data/normalized/diced/ov/tracerel__illuminaga_dnaseq__broad_mit_edu__Level_2__Mutation_Calling__maf/broad.mit.edu_OV.IlluminaGA_DNASeq.Level_2.1.5.0/TCGA-24-1422-01.maf.txt
Loaded /xchip/gdac_data/normalized/diced/ov/tracerel__illuminaga_dnaseq__broad_mit_edu__Level_2__Mutation_Calling__maf/broad.mit.edu_OV.IlluminaGA_DNASeq.Level_2.1.5.0/TCGA-24-1423-01.maf.txt
Loaded /xchip/gdac_data/normalized/diced/ov/tracerel__illuminaga_dnaseq__broad_mit_edu__Level_2__Mutation_Calling__maf/broad.mit.edu_OV.IlluminaGA_DNASeq.Level_2.1.5.0/TCGA-24-1431-01.maf.txt
Loaded /xchip/gdac_data/normalized/diced/ov/tracerel__illuminaga_dnaseq__broad_mit_edu__Level_2__Mutation_Calling__maf/broad.mit.edu_OV.IlluminaGA_DNASeq.Level_2.1.5.0/TCGA-24-1434-01.maf.txt
Loaded /xchip/gdac_data/normalized/diced/ov/tracerel__illuminaga_dnaseq__broad_mit_edu__Level_2__Mutation_Calling__maf/broad.mit.edu_OV.IlluminaGA_DNASeq.Level_2.1.5.0/TCGA-24-1466-01.maf.txt
Loaded /xchip/gdac_data/normalized/diced/ov/tracerel__illuminaga_dnaseq__broad_mit_edu__Level_2__Mutation_Calling__maf/broad.mit.edu_OV.IlluminaGA_DNASeq.Level_2.1.5.0/TCGA-24-1471-01.maf.txt
Loaded /xchip/gdac_data/normalized/diced/ov/tracerel__illuminaga_dnaseq__broad_mit_edu__Level_2__Mutation_Calling__maf/broad.mit.edu_OV.IlluminaGA_DNASeq.Level_2.1.5.0/TCGA-24-1474-01.maf.txt
Loaded /xchip/gdac_data/normalized/diced/ov/tracerel__illuminaga_dnaseq__broad_mit_edu__Level_2__Mutation_Calling__maf/broad.mit.edu_OV.IlluminaGA_DNASeq.Level_2.1.5.0/TCGA-24-1551-01.maf.txt
Loaded /xchip/gdac_data/normalized/diced/ov/tracerel__illuminaga_dnaseq__broad_mit_edu__Level_2__Mutation_Calling__maf/broad.mit.edu_OV.IlluminaGA_DNASeq.Level_2.1.5.0/TCGA-24-1552-01.maf.txt
Loaded /xchip/gdac_data/normalized/diced/ov/tracerel__illuminaga_dnaseq__broad_mit_edu__Level_2__Mutation_Calling__maf/broad.mit.edu_OV.IlluminaGA_DNASeq.Level_2.1.5.0/TCGA-24-1564-01.maf.txt
Loaded /xchip/gdac_data/normalized/diced/ov/tracerel__illuminaga_dnaseq__broad_mit_edu__Level_2__Mutation_Calling__maf/broad.mit.edu_OV.IlluminaGA_DNASeq.Level_2.1.5.0/TCGA-24-1565-01.maf.txt
Loaded /xchip/gdac_data/normalized/diced/ov/tracerel__illuminaga_dnaseq__broad_mit_edu__Level_2__Mutation_Calling__maf/broad.mit.edu_OV.IlluminaGA_DNASeq.Level_2.1.5.0/TCGA-24-1603-01.maf.txt
Loaded /xchip/gdac_data/normalized/diced/ov/tracerel__illuminaga_dnaseq__broad_mit_edu__Level_2__Mutation_Calling__maf/broad.mit.edu_OV.IlluminaGA_DNASeq.Level_2.1.5.0/TCGA-24-2019-01.maf.txt
Loaded /xchip/gdac_data/normalized/diced/ov/tracerel__illuminaga_dnaseq__broad_mit_edu__Level_2__Mutation_Calling__maf/broad.mit.edu_OV.IlluminaGA_DNASeq.Level_2.1.5.0/TCGA-24-2024-01.maf.txt
Loaded /xchip/gdac_data/normalized/diced/ov/tracerel__illuminaga_dnaseq__broad_mit_edu__Level_2__Mutation_Calling__maf/broad.mit.edu_OV.IlluminaGA_DNASeq.Level_2.1.5.0/TCGA-24-2030-01.maf.txt
Loaded /xchip/gdac_data/normalized/diced/ov/tracerel__illuminaga_dnaseq__broad_mit_edu__Level_2__Mutation_Calling__maf/broad.mit.edu_OV.IlluminaGA_DNASeq.Level_2.1.5.0/TCGA-24-2035-01.maf.txt
Loaded /xchip/gdac_data/normalized/diced/ov/tracerel__illuminaga_dnaseq__broad_mit_edu__Level_2__Mutation_Calling__maf/broad.mit.edu_OV.IlluminaGA_DNASeq.Level_2.1.5.0/TCGA-24-2038-01.maf.txt
Loaded /xchip/gdac_data/normalized/diced/ov/tracerel__illuminaga_dnaseq__broad_mit_edu__Level_2__Mutation_Calling__maf/broad.mit.edu_OV.IlluminaGA_DNASeq.Level_2.1.5.0/TCGA-24-2254-01.maf.txt
Loaded /xchip/gdac_data/normalized/diced/ov/tracerel__illuminaga_dnaseq__broad_mit_edu__Level_2__Mutation_Calling__maf/broad.mit.edu_OV.IlluminaGA_DNASeq.Level_2.1.5.0/TCGA-24-2260-01.maf.txt
Loaded /xchip/gdac_data/normalized/diced/ov/tracerel__illuminaga_dnaseq__broad_mit_edu__Level_2__Mutation_Calling__maf/broad.mit.edu_OV.IlluminaGA_DNASeq.Level_2.1.5.0/TCGA-24-2261-01.maf.txt
Loaded /xchip/gdac_data/normalized/diced/ov/tracerel__illuminaga_dnaseq__broad_mit_edu__Level_2__Mutation_Calling__maf/broad.mit.edu_OV.IlluminaGA_DNASeq.Level_2.1.5.0/TCGA-24-2262-01.maf.txt
Loaded /xchip/gdac_data/normalized/diced/ov/tracerel__illuminaga_dnaseq__broad_mit_edu__Level_2__Mutation_Calling__maf/broad.mit.edu_OV.IlluminaGA_DNASeq.Level_2.1.5.0/TCGA-24-2267-01.maf.txt
Loaded /xchip/gdac_data/normalized/diced/ov/tracerel__illuminaga_dnaseq__broad_mit_edu__Level_2__Mutation_Calling__maf/broad.mit.edu_OV.IlluminaGA_DNASeq.Level_2.1.5.0/TCGA-24-2271-01.maf.txt
Loaded /xchip/gdac_data/normalized/diced/ov/tracerel__illuminaga_dnaseq__broad_mit_edu__Level_2__Mutation_Calling__maf/broad.mit.edu_OV.IlluminaGA_DNASeq.Level_2.1.5.0/TCGA-24-2280-01.maf.txt
Loaded /xchip/gdac_data/normalized/diced/ov/tracerel__illuminaga_dnaseq__broad_mit_edu__Level_2__Mutation_Calling__maf/broad.mit.edu_OV.IlluminaGA_DNASeq.Level_2.1.5.0/TCGA-24-2281-01.maf.txt
Loaded /xchip/gdac_data/normalized/diced/ov/tracerel__illuminaga_dnaseq__broad_mit_edu__Level_2__Mutation_Calling__maf/broad.mit.edu_OV.IlluminaGA_DNASeq.Level_2.1.5.0/TCGA-24-2288-01.maf.txt
Loaded /xchip/gdac_data/normalized/diced/ov/tracerel__illuminaga_dnaseq__broad_mit_edu__Level_2__Mutation_Calling__maf/broad.mit.edu_OV.IlluminaGA_DNASeq.Level_2.1.5.0/TCGA-24-2289-01.maf.txt
Loaded /xchip/gdac_data/normalized/diced/ov/tracerel__illuminaga_dnaseq__broad_mit_edu__Level_2__Mutation_Calling__maf/broad.mit.edu_OV.IlluminaGA_DNASeq.Level_2.1.5.0/TCGA-24-2290-01.maf.txt
Loaded /xchip/gdac_data/normalized/diced/ov/tracerel__illuminaga_dnaseq__broad_mit_edu__Level_2__Mutation_Calling__maf/broad.mit.edu_OV.IlluminaGA_DNASeq.Level_2.1.5.0/TCGA-24-2293-01.maf.txt
Loaded /xchip/gdac_data/normalized/diced/ov/tracerel__illuminaga_dnaseq__broad_mit_edu__Level_2__Mutation_Calling__maf/broad.mit.edu_OV.IlluminaGA_DNASeq.Level_2.1.5.0/TCGA-24-2298-01.maf.txt
Loaded /xchip/gdac_data/normalized/diced/ov/tracerel__illuminaga_dnaseq__broad_mit_edu__Level_2__Mutation_Calling__maf/broad.mit.edu_OV.IlluminaGA_DNASeq.Level_2.1.5.0/TCGA-25-1313-01.maf.txt
Loaded /xchip/gdac_data/normalized/diced/ov/tracerel__illuminaga_dnaseq__broad_mit_edu__Level_2__Mutation_Calling__maf/broad.mit.edu_OV.IlluminaGA_DNASeq.Level_2.1.5.0/TCGA-25-1319-01.maf.txt
Loaded /xchip/gdac_data/normalized/diced/ov/tracerel__illuminaga_dnaseq__broad_mit_edu__Level_2__Mutation_Calling__maf/broad.mit.edu_OV.IlluminaGA_DNASeq.Level_2.1.5.0/TCGA-25-1320-01.maf.txt
Loaded /xchip/gdac_data/normalized/diced/ov/tracerel__illuminaga_dnaseq__broad_mit_edu__Level_2__Mutation_Calling__maf/broad.mit.edu_OV.IlluminaGA_DNASeq.Level_2.1.5.0/TCGA-25-1321-01.maf.txt
Loaded /xchip/gdac_data/normalized/diced/ov/tracerel__illuminaga_dnaseq__broad_mit_edu__Level_2__Mutation_Calling__maf/broad.mit.edu_OV.IlluminaGA_DNASeq.Level_2.1.5.0/TCGA-25-1326-01.maf.txt
Loaded /xchip/gdac_data/normalized/diced/ov/tracerel__illuminaga_dnaseq__broad_mit_edu__Level_2__Mutation_Calling__maf/broad.mit.edu_OV.IlluminaGA_DNASeq.Level_2.1.5.0/TCGA-25-1328-01.maf.txt
Loaded /xchip/gdac_data/normalized/diced/ov/tracerel__illuminaga_dnaseq__broad_mit_edu__Level_2__Mutation_Calling__maf/broad.mit.edu_OV.IlluminaGA_DNASeq.Level_2.1.5.0/TCGA-25-1329-01.maf.txt
Loaded /xchip/gdac_data/normalized/diced/ov/tracerel__illuminaga_dnaseq__broad_mit_edu__Level_2__Mutation_Calling__maf/broad.mit.edu_OV.IlluminaGA_DNASeq.Level_2.1.5.0/TCGA-25-2042-01.maf.txt
Loaded /xchip/gdac_data/normalized/diced/ov/tracerel__illuminaga_dnaseq__broad_mit_edu__Level_2__Mutation_Calling__maf/broad.mit.edu_OV.IlluminaGA_DNASeq.Level_2.1.5.0/TCGA-25-2391-01.maf.txt
Loaded /xchip/gdac_data/normalized/diced/ov/tracerel__illuminaga_dnaseq__broad_mit_edu__Level_2__Mutation_Calling__maf/broad.mit.edu_OV.IlluminaGA_DNASeq.Level_2.1.5.0/TCGA-25-2392-01.maf.txt
Loaded /xchip/gdac_data/normalized/diced/ov/tracerel__illuminaga_dnaseq__broad_mit_edu__Level_2__Mutation_Calling__maf/broad.mit.edu_OV.IlluminaGA_DNASeq.Level_2.1.5.0/TCGA-25-2393-01.maf.txt
Loaded /xchip/gdac_data/normalized/diced/ov/tracerel__illuminaga_dnaseq__broad_mit_edu__Level_2__Mutation_Calling__maf/broad.mit.edu_OV.IlluminaGA_DNASeq.Level_2.1.5.0/TCGA-25-2396-01.maf.txt
Loaded /xchip/gdac_data/normalized/diced/ov/tracerel__illuminaga_dnaseq__broad_mit_edu__Level_2__Mutation_Calling__maf/broad.mit.edu_OV.IlluminaGA_DNASeq.Level_2.1.5.0/TCGA-25-2398-01.maf.txt
Loaded /xchip/gdac_data/normalized/diced/ov/tracerel__illuminaga_dnaseq__broad_mit_edu__Level_2__Mutation_Calling__maf/broad.mit.edu_OV.IlluminaGA_DNASeq.Level_2.1.5.0/TCGA-25-2399-01.maf.txt
Loaded /xchip/gdac_data/normalized/diced/ov/tracerel__illuminaga_dnaseq__broad_mit_edu__Level_2__Mutation_Calling__maf/broad.mit.edu_OV.IlluminaGA_DNASeq.Level_2.1.5.0/TCGA-25-2400-01.maf.txt
Loaded /xchip/gdac_data/normalized/diced/ov/tracerel__illuminaga_dnaseq__broad_mit_edu__Level_2__Mutation_Calling__maf/broad.mit.edu_OV.IlluminaGA_DNASeq.Level_2.1.5.0/TCGA-25-2401-01.maf.txt
Loaded /xchip/gdac_data/normalized/diced/ov/tracerel__illuminaga_dnaseq__broad_mit_edu__Level_2__Mutation_Calling__maf/broad.mit.edu_OV.IlluminaGA_DNASeq.Level_2.1.5.0/TCGA-25-2404-01.maf.txt
Loaded /xchip/gdac_data/normalized/diced/ov/tracerel__illuminaga_dnaseq__broad_mit_edu__Level_2__Mutation_Calling__maf/broad.mit.edu_OV.IlluminaGA_DNASeq.Level_2.1.5.0/TCGA-25-2408-01.maf.txt
Loaded /xchip/gdac_data/normalized/diced/ov/tracerel__illuminaga_dnaseq__broad_mit_edu__Level_2__Mutation_Calling__maf/broad.mit.edu_OV.IlluminaGA_DNASeq.Level_2.1.5.0/TCGA-25-2409-01.maf.txt
Loaded /xchip/gdac_data/normalized/diced/ov/tracerel__illuminaga_dnaseq__broad_mit_edu__Level_2__Mutation_Calling__maf/broad.mit.edu_OV.IlluminaGA_DNASeq.Level_2.1.5.0/TCGA-29-2427-01.maf.txt
Loaded /xchip/gdac_data/normalized/diced/ov/tracerel__illuminaga_dnaseq__broad_mit_edu__Level_2__Mutation_Calling__maf/broad.mit.edu_OV.IlluminaGA_DNASeq.Level_2.1.5.0/TCGA-30-1853-01.maf.txt
Loaded /xchip/gdac_data/normalized/diced/ov/tracerel__illuminaga_dnaseq__broad_mit_edu__Level_2__Mutation_Calling__maf/broad.mit.edu_OV.IlluminaGA_DNASeq.Level_2.1.5.0/TCGA-30-1862-01.maf.txt
Loaded /xchip/gdac_data/normalized/diced/ov/tracerel__illuminaga_dnaseq__broad_mit_edu__Level_2__Mutation_Calling__maf/broad.mit.edu_OV.IlluminaGA_DNASeq.Level_2.1.5.0/TCGA-30-1891-01.maf.txt
Loaded /xchip/gdac_data/normalized/diced/ov/tracerel__illuminaga_dnaseq__broad_mit_edu__Level_2__Mutation_Calling__maf/broad.mit.edu_OV.IlluminaGA_DNASeq.Level_2.1.5.0/TCGA-31-1950-01.maf.txt
Loaded /xchip/gdac_data/normalized/diced/ov/tracerel__illuminaga_dnaseq__broad_mit_edu__Level_2__Mutation_Calling__maf/broad.mit.edu_OV.IlluminaGA_DNASeq.Level_2.1.5.0/TCGA-31-1953-01.maf.txt
Loaded /xchip/gdac_data/normalized/diced/ov/tracerel__illuminaga_dnaseq__broad_mit_edu__Level_2__Mutation_Calling__maf/broad.mit.edu_OV.IlluminaGA_DNASeq.Level_2.1.5.0/TCGA-31-1959-01.maf.txt
Loaded /xchip/gdac_data/normalized/diced/ov/tracerel__illuminaga_dnaseq__broad_mit_edu__Level_2__Mutation_Calling__maf/broad.mit.edu_OV.IlluminaGA_DNASeq.Level_2.1.5.0/TCGA-57-1993-01.maf.txt
Loaded /xchip/gdac_data/normalized/diced/ov/tracerel__illuminaga_dnaseq__broad_mit_edu__Level_2__Mutation_Calling__maf/broad.mit.edu_OV.IlluminaGA_DNASeq.Level_2.1.5.0/TCGA-59-2348-01.maf.txt
Loaded /xchip/gdac_data/normalized/diced/ov/tracerel__illuminaga_dnaseq__broad_mit_edu__Level_2__Mutation_Calling__maf/broad.mit.edu_OV.IlluminaGA_DNASeq.Level_2.1.5.0/TCGA-59-2350-01.maf.txt
Loaded /xchip/gdac_data/normalized/diced/ov/tracerel__illuminaga_dnaseq__broad_mit_edu__Level_2__Mutation_Calling__maf/broad.mit.edu_OV.IlluminaGA_DNASeq.Level_2.1.5.0/TCGA-59-2351-01.maf.txt
Loaded /xchip/gdac_data/normalized/diced/ov/tracerel__illuminaga_dnaseq__broad_mit_edu__Level_2__Mutation_Calling__maf/broad.mit.edu_OV.IlluminaGA_DNASeq.Level_2.1.5.0/TCGA-59-2352-01.maf.txt
Loaded /xchip/gdac_data/normalized/diced/ov/tracerel__illuminaga_dnaseq__broad_mit_edu__Level_2__Mutation_Calling__maf/broad.mit.edu_OV.IlluminaGA_DNASeq.Level_2.1.5.0/TCGA-59-2354-01.maf.txt
Loaded /xchip/gdac_data/normalized/diced/ov/tracerel__illuminaga_dnaseq__broad_mit_edu__Level_2__Mutation_Calling__maf/broad.mit.edu_OV.IlluminaGA_DNASeq.Level_2.1.5.0/TCGA-59-2355-01.maf.txt
Loaded /xchip/gdac_data/normalized/diced/ov/tracerel__illuminaga_dnaseq__broad_mit_edu__Level_2__Mutation_Calling__maf/broad.mit.edu_OV.IlluminaGA_DNASeq.Level_2.1.5.0/TCGA-59-2363-01.maf.txt
Loaded /xchip/gdac_data/normalized/diced/ov/tracerel__illuminaga_dnaseq__broad_mit_edu__Level_2__Mutation_Calling__maf/broad.mit.edu_OV.IlluminaGA_DNASeq.Level_2.1.5.0/TCGA-61-1728-01.maf.txt
Loaded /xchip/gdac_data/normalized/diced/ov/tracerel__illuminaga_dnaseq__broad_mit_edu__Level_2__Mutation_Calling__maf/broad.mit.edu_OV.IlluminaGA_DNASeq.Level_2.1.5.0/TCGA-61-1736-01.maf.txt
Loaded /xchip/gdac_data/normalized/diced/ov/tracerel__illuminaga_dnaseq__broad_mit_edu__Level_2__Mutation_Calling__maf/broad.mit.edu_OV.IlluminaGA_DNASeq.Level_2.1.5.0/TCGA-61-1919-01.maf.txt
Loaded /xchip/gdac_data/normalized/diced/ov/tracerel__illuminaga_dnaseq__broad_mit_edu__Level_2__Mutation_Calling__maf/broad.mit.edu_OV.IlluminaGA_DNASeq.Level_2.1.5.0/TCGA-61-1995-01.maf.txt
Loaded /xchip/gdac_data/normalized/diced/ov/tracerel__illuminaga_dnaseq__broad_mit_edu__Level_2__Mutation_Calling__maf/broad.mit.edu_OV.IlluminaGA_DNASeq.Level_2.1.5.0/TCGA-61-1998-01.maf.txt
Loaded /xchip/gdac_data/normalized/diced/ov/tracerel__illuminaga_dnaseq__broad_mit_edu__Level_2__Mutation_Calling__maf/broad.mit.edu_OV.IlluminaGA_DNASeq.Level_2.1.5.0/TCGA-61-2000-01.maf.txt
Loaded /xchip/gdac_data/normalized/diced/ov/tracerel__illuminaga_dnaseq__broad_mit_edu__Level_2__Mutation_Calling__maf/broad.mit.edu_OV.IlluminaGA_DNASeq.Level_2.1.5.0/TCGA-61-2002-01.maf.txt
Loaded /xchip/gdac_data/normalized/diced/ov/tracerel__illuminaga_dnaseq__broad_mit_edu__Level_2__Mutation_Calling__maf/broad.mit.edu_OV.IlluminaGA_DNASeq.Level_2.1.5.0/TCGA-61-2003-01.maf.txt
Loaded /xchip/gdac_data/normalized/diced/ov/tracerel__illuminaga_dnaseq__broad_mit_edu__Level_2__Mutation_Calling__maf/broad.mit.edu_OV.IlluminaGA_DNASeq.Level_2.1.5.0/TCGA-61-2008-01.maf.txt
Loaded /xchip/gdac_data/normalized/diced/ov/tracerel__illuminaga_dnaseq__broad_mit_edu__Level_2__Mutation_Calling__maf/broad.mit.edu_OV.IlluminaGA_DNASeq.Level_2.1.5.0/TCGA-61-2009-01.maf.txt
Loaded /xchip/gdac_data/normalized/diced/ov/tracerel__illuminaga_dnaseq__broad_mit_edu__Level_2__Mutation_Calling__maf/broad.mit.edu_OV.IlluminaGA_DNASeq.Level_2.1.5.0/TCGA-61-2012-01.maf.txt
Loaded /xchip/gdac_data/normalized/diced/ov/tracerel__illuminaga_dnaseq__broad_mit_edu__Level_2__Mutation_Calling__maf/broad.mit.edu_OV.IlluminaGA_DNASeq.Level_2.1.5.0/TCGA-61-2016-01.maf.txt
Loaded /xchip/gdac_data/normalized/diced/ov/tracerel__illuminaga_dnaseq__broad_mit_edu__Level_2__Mutation_Calling__maf/broad.mit.edu_OV.IlluminaGA_DNASeq.Level_2.1.5.0/TCGA-61-2088-01.maf.txt
Loaded /xchip/gdac_data/normalized/diced/ov/tracerel__illuminaga_dnaseq__broad_mit_edu__Level_2__Mutation_Calling__maf/broad.mit.edu_OV.IlluminaGA_DNASeq.Level_2.1.5.0/TCGA-61-2092-01.maf.txt
Loaded /xchip/gdac_data/normalized/diced/ov/tracerel__illuminaga_dnaseq__broad_mit_edu__Level_2__Mutation_Calling__maf/broad.mit.edu_OV.IlluminaGA_DNASeq.Level_2.1.5.0/TCGA-61-2094-01.maf.txt
Loaded /xchip/gdac_data/normalized/diced/ov/tracerel__illuminaga_dnaseq__broad_mit_edu__Level_2__Mutation_Calling__maf/broad.mit.edu_OV.IlluminaGA_DNASeq.Level_2.1.5.0/TCGA-61-2095-01.maf.txt
Loaded /xchip/gdac_data/normalized/diced/ov/tracerel__illuminaga_dnaseq__broad_mit_edu__Level_2__Mutation_Calling__maf/broad.mit.edu_OV.IlluminaGA_DNASeq.Level_2.1.5.0/TCGA-61-2097-01.maf.txt
Loaded /xchip/gdac_data/normalized/diced/ov/tracerel__illuminaga_dnaseq__broad_mit_edu__Level_2__Mutation_Calling__maf/broad.mit.edu_OV.IlluminaGA_DNASeq.Level_2.1.5.0/TCGA-61-2101-01.maf.txt
Loaded /xchip/gdac_data/normalized/diced/ov/tracerel__illuminaga_dnaseq__broad_mit_edu__Level_2__Mutation_Calling__maf/broad.mit.edu_OV.IlluminaGA_DNASeq.Level_2.1.5.0/TCGA-61-2102-01.maf.txt
Loaded /xchip/gdac_data/normalized/diced/ov/tracerel__illuminaga_dnaseq__broad_mit_edu__Level_2__Mutation_Calling__maf/broad.mit.edu_OV.IlluminaGA_DNASeq.Level_2.1.5.0/TCGA-61-2104-01.maf.txt
Loaded /xchip/gdac_data/normalized/diced/ov/tracerel__illuminaga_dnaseq__broad_mit_edu__Level_2__Mutation_Calling__maf/broad.mit.edu_OV.IlluminaGA_DNASeq.Level_2.1.5.0/TCGA-61-2109-01.maf.txt
Loaded /xchip/gdac_data/normalized/diced/ov/tracerel__illuminaga_dnaseq__broad_mit_edu__Level_2__Mutation_Calling__maf/broad.mit.edu_OV.IlluminaGA_DNASeq.Level_2.1.5.0/TCGA-61-2110-01.maf.txt
Loaded /xchip/gdac_data/normalized/diced/ov/tracerel__illuminaga_dnaseq__broad_mit_edu__Level_2__Mutation_Calling__maf/broad.mit.edu_OV.IlluminaGA_DNASeq.Level_2.1.5.0/TCGA-61-2111-01.maf.txt
Loaded /xchip/gdac_data/normalized/diced/ov/tracerel__illuminaga_dnaseq__broad_mit_edu__Level_2__Mutation_Calling__maf/broad.mit.edu_OV.IlluminaGA_DNASeq.Level_2.1.5.0/TCGA-61-2113-01.maf.txt
Loading MAFs for WashU
Loaded /xchip/gdac_data/normalized/diced/ov/tracerel__illuminaga_dnaseq__genome_wustl_edu__Level_2__Mutation_Calling__maf/genome.wustl.edu_OV.IlluminaGA_DNASeq.Level_2.1.4.0/TCGA-04-1332-01.maf.txt
Loaded /xchip/gdac_data/normalized/diced/ov/tracerel__illuminaga_dnaseq__genome_wustl_edu__Level_2__Mutation_Calling__maf/genome.wustl.edu_OV.IlluminaGA_DNASeq.Level_2.1.4.0/TCGA-04-1336-01.maf.txt
Loaded /xchip/gdac_data/normalized/diced/ov/tracerel__illuminaga_dnaseq__genome_wustl_edu__Level_2__Mutation_Calling__maf/genome.wustl.edu_OV.IlluminaGA_DNASeq.Level_2.1.4.0/TCGA-04-1343-01.maf.txt
Loaded /xchip/gdac_data/normalized/diced/ov/tracerel__illuminaga_dnaseq__genome_wustl_edu__Level_2__Mutation_Calling__maf/genome.wustl.edu_OV.IlluminaGA_DNASeq.Level_2.1.4.0/TCGA-04-1346-01.maf.txt
Loaded /xchip/gdac_data/normalized/diced/ov/tracerel__illuminaga_dnaseq__genome_wustl_edu__Level_2__Mutation_Calling__maf/genome.wustl.edu_OV.IlluminaGA_DNASeq.Level_2.1.4.0/TCGA-04-1347-01.maf.txt
Loaded /xchip/gdac_data/normalized/diced/ov/tracerel__illuminaga_dnaseq__genome_wustl_edu__Level_2__Mutation_Calling__maf/genome.wustl.edu_OV.IlluminaGA_DNASeq.Level_2.1.4.0/TCGA-04-1348-01.maf.txt
Loaded /xchip/gdac_data/normalized/diced/ov/tracerel__illuminaga_dnaseq__genome_wustl_edu__Level_2__Mutation_Calling__maf/genome.wustl.edu_OV.IlluminaGA_DNASeq.Level_2.1.4.0/TCGA-04-1349-01.maf.txt
Loaded /xchip/gdac_data/normalized/diced/ov/tracerel__illuminaga_dnaseq__genome_wustl_edu__Level_2__Mutation_Calling__maf/genome.wustl.edu_OV.IlluminaGA_DNASeq.Level_2.1.4.0/TCGA-04-1361-01.maf.txt
Loaded /xchip/gdac_data/normalized/diced/ov/tracerel__illuminaga_dnaseq__genome_wustl_edu__Level_2__Mutation_Calling__maf/genome.wustl.edu_OV.IlluminaGA_DNASeq.Level_2.1.4.0/TCGA-04-1362-01.maf.txt
Loaded /xchip/gdac_data/normalized/diced/ov/tracerel__illuminaga_dnaseq__genome_wustl_edu__Level_2__Mutation_Calling__maf/genome.wustl.edu_OV.IlluminaGA_DNASeq.Level_2.1.4.0/TCGA-04-1542-01.maf.txt
Loaded /xchip/gdac_data/normalized/diced/ov/tracerel__illuminaga_dnaseq__genome_wustl_edu__Level_2__Mutation_Calling__maf/genome.wustl.edu_OV.IlluminaGA_DNASeq.Level_2.1.4.0/TCGA-09-0366-01.maf.txt
Loaded /xchip/gdac_data/normalized/diced/ov/tracerel__illuminaga_dnaseq__genome_wustl_edu__Level_2__Mutation_Calling__maf/genome.wustl.edu_OV.IlluminaGA_DNASeq.Level_2.1.4.0/TCGA-09-0369-01.maf.txt
Loaded /xchip/gdac_data/normalized/diced/ov/tracerel__illuminaga_dnaseq__genome_wustl_edu__Level_2__Mutation_Calling__maf/genome.wustl.edu_OV.IlluminaGA_DNASeq.Level_2.1.4.0/TCGA-10-0930-01.maf.txt
Loaded /xchip/gdac_data/normalized/diced/ov/tracerel__illuminaga_dnaseq__genome_wustl_edu__Level_2__Mutation_Calling__maf/genome.wustl.edu_OV.IlluminaGA_DNASeq.Level_2.1.4.0/TCGA-10-0933-01.maf.txt
Loaded /xchip/gdac_data/normalized/diced/ov/tracerel__illuminaga_dnaseq__genome_wustl_edu__Level_2__Mutation_Calling__maf/genome.wustl.edu_OV.IlluminaGA_DNASeq.Level_2.1.4.0/TCGA-10-0935-01.maf.txt
Loaded /xchip/gdac_data/normalized/diced/ov/tracerel__illuminaga_dnaseq__genome_wustl_edu__Level_2__Mutation_Calling__maf/genome.wustl.edu_OV.IlluminaGA_DNASeq.Level_2.1.4.0/TCGA-13-0723-01.maf.txt
Loaded /xchip/gdac_data/normalized/diced/ov/tracerel__illuminaga_dnaseq__genome_wustl_edu__Level_2__Mutation_Calling__maf/genome.wustl.edu_OV.IlluminaGA_DNASeq.Level_2.1.4.0/TCGA-13-0724-01.maf.txt
Loaded /xchip/gdac_data/normalized/diced/ov/tracerel__illuminaga_dnaseq__genome_wustl_edu__Level_2__Mutation_Calling__maf/genome.wustl.edu_OV.IlluminaGA_DNASeq.Level_2.1.4.0/TCGA-13-0726-01.maf.txt
Loaded /xchip/gdac_data/normalized/diced/ov/tracerel__illuminaga_dnaseq__genome_wustl_edu__Level_2__Mutation_Calling__maf/genome.wustl.edu_OV.IlluminaGA_DNASeq.Level_2.1.4.0/TCGA-13-0755-01.maf.txt
Loaded /xchip/gdac_data/normalized/diced/ov/tracerel__illuminaga_dnaseq__genome_wustl_edu__Level_2__Mutation_Calling__maf/genome.wustl.edu_OV.IlluminaGA_DNASeq.Level_2.1.4.0/TCGA-13-0760-01.maf.txt
Loaded /xchip/gdac_data/normalized/diced/ov/tracerel__illuminaga_dnaseq__genome_wustl_edu__Level_2__Mutation_Calling__maf/genome.wustl.edu_OV.IlluminaGA_DNASeq.Level_2.1.4.0/TCGA-13-0765-01.maf.txt
Loaded /xchip/gdac_data/normalized/diced/ov/tracerel__illuminaga_dnaseq__genome_wustl_edu__Level_2__Mutation_Calling__maf/genome.wustl.edu_OV.IlluminaGA_DNASeq.Level_2.1.4.0/TCGA-13-0791-01.maf.txt
Loaded /xchip/gdac_data/normalized/diced/ov/tracerel__illuminaga_dnaseq__genome_wustl_edu__Level_2__Mutation_Calling__maf/genome.wustl.edu_OV.IlluminaGA_DNASeq.Level_2.1.4.0/TCGA-13-0795-01.maf.txt
Loaded /xchip/gdac_data/normalized/diced/ov/tracerel__illuminaga_dnaseq__genome_wustl_edu__Level_2__Mutation_Calling__maf/genome.wustl.edu_OV.IlluminaGA_DNASeq.Level_2.1.4.0/TCGA-13-0800-01.maf.txt
Loaded /xchip/gdac_data/normalized/diced/ov/tracerel__illuminaga_dnaseq__genome_wustl_edu__Level_2__Mutation_Calling__maf/genome.wustl.edu_OV.IlluminaGA_DNASeq.Level_2.1.4.0/TCGA-13-0804-01.maf.txt
Loaded /xchip/gdac_data/normalized/diced/ov/tracerel__illuminaga_dnaseq__genome_wustl_edu__Level_2__Mutation_Calling__maf/genome.wustl.edu_OV.IlluminaGA_DNASeq.Level_2.1.4.0/TCGA-13-0807-01.maf.txt
Loaded /xchip/gdac_data/normalized/diced/ov/tracerel__illuminaga_dnaseq__genome_wustl_edu__Level_2__Mutation_Calling__maf/genome.wustl.edu_OV.IlluminaGA_DNASeq.Level_2.1.4.0/TCGA-13-0884-01.maf.txt
Loaded /xchip/gdac_data/normalized/diced/ov/tracerel__illuminaga_dnaseq__genome_wustl_edu__Level_2__Mutation_Calling__maf/genome.wustl.edu_OV.IlluminaGA_DNASeq.Level_2.1.4.0/TCGA-13-0885-01.maf.txt
Loaded /xchip/gdac_data/normalized/diced/ov/tracerel__illuminaga_dnaseq__genome_wustl_edu__Level_2__Mutation_Calling__maf/genome.wustl.edu_OV.IlluminaGA_DNASeq.Level_2.1.4.0/TCGA-13-0887-01.maf.txt
Loaded /xchip/gdac_data/normalized/diced/ov/tracerel__illuminaga_dnaseq__genome_wustl_edu__Level_2__Mutation_Calling__maf/genome.wustl.edu_OV.IlluminaGA_DNASeq.Level_2.1.4.0/TCGA-13-0890-01.maf.txt
Loaded /xchip/gdac_data/normalized/diced/ov/tracerel__illuminaga_dnaseq__genome_wustl_edu__Level_2__Mutation_Calling__maf/genome.wustl.edu_OV.IlluminaGA_DNASeq.Level_2.1.4.0/TCGA-13-0893-01.maf.txt
Loaded /xchip/gdac_data/normalized/diced/ov/tracerel__illuminaga_dnaseq__genome_wustl_edu__Level_2__Mutation_Calling__maf/genome.wustl.edu_OV.IlluminaGA_DNASeq.Level_2.1.4.0/TCGA-13-0894-01.maf.txt
Loaded /xchip/gdac_data/normalized/diced/ov/tracerel__illuminaga_dnaseq__genome_wustl_edu__Level_2__Mutation_Calling__maf/genome.wustl.edu_OV.IlluminaGA_DNASeq.Level_2.1.4.0/TCGA-13-0897-01.maf.txt
Loaded /xchip/gdac_data/normalized/diced/ov/tracerel__illuminaga_dnaseq__genome_wustl_edu__Level_2__Mutation_Calling__maf/genome.wustl.edu_OV.IlluminaGA_DNASeq.Level_2.1.4.0/TCGA-13-0903-01.maf.txt
Loaded /xchip/gdac_data/normalized/diced/ov/tracerel__illuminaga_dnaseq__genome_wustl_edu__Level_2__Mutation_Calling__maf/genome.wustl.edu_OV.IlluminaGA_DNASeq.Level_2.1.4.0/TCGA-13-0910-01.maf.txt
Loaded /xchip/gdac_data/normalized/diced/ov/tracerel__illuminaga_dnaseq__genome_wustl_edu__Level_2__Mutation_Calling__maf/genome.wustl.edu_OV.IlluminaGA_DNASeq.Level_2.1.4.0/TCGA-13-0912-01.maf.txt
Loaded /xchip/gdac_data/normalized/diced/ov/tracerel__illuminaga_dnaseq__genome_wustl_edu__Level_2__Mutation_Calling__maf/genome.wustl.edu_OV.IlluminaGA_DNASeq.Level_2.1.4.0/TCGA-13-0920-01.maf.txt
Loaded /xchip/gdac_data/normalized/diced/ov/tracerel__illuminaga_dnaseq__genome_wustl_edu__Level_2__Mutation_Calling__maf/genome.wustl.edu_OV.IlluminaGA_DNASeq.Level_2.1.4.0/TCGA-13-0924-01.maf.txt
Loaded /xchip/gdac_data/normalized/diced/ov/tracerel__illuminaga_dnaseq__genome_wustl_edu__Level_2__Mutation_Calling__maf/genome.wustl.edu_OV.IlluminaGA_DNASeq.Level_2.1.4.0/TCGA-13-1403-01.maf.txt
Loaded /xchip/gdac_data/normalized/diced/ov/tracerel__illuminaga_dnaseq__genome_wustl_edu__Level_2__Mutation_Calling__maf/genome.wustl.edu_OV.IlluminaGA_DNASeq.Level_2.1.4.0/TCGA-13-1404-01.maf.txt
Loaded /xchip/gdac_data/normalized/diced/ov/tracerel__illuminaga_dnaseq__genome_wustl_edu__Level_2__Mutation_Calling__maf/genome.wustl.edu_OV.IlluminaGA_DNASeq.Level_2.1.4.0/TCGA-13-1405-01.maf.txt
Loaded /xchip/gdac_data/normalized/diced/ov/tracerel__illuminaga_dnaseq__genome_wustl_edu__Level_2__Mutation_Calling__maf/genome.wustl.edu_OV.IlluminaGA_DNASeq.Level_2.1.4.0/TCGA-13-1411-01.maf.txt
Loaded /xchip/gdac_data/normalized/diced/ov/tracerel__illuminaga_dnaseq__genome_wustl_edu__Level_2__Mutation_Calling__maf/genome.wustl.edu_OV.IlluminaGA_DNASeq.Level_2.1.4.0/TCGA-13-1412-01.maf.txt
Loaded /xchip/gdac_data/normalized/diced/ov/tracerel__illuminaga_dnaseq__genome_wustl_edu__Level_2__Mutation_Calling__maf/genome.wustl.edu_OV.IlluminaGA_DNASeq.Level_2.1.4.0/TCGA-13-1481-01.maf.txt
Loaded /xchip/gdac_data/normalized/diced/ov/tracerel__illuminaga_dnaseq__genome_wustl_edu__Level_2__Mutation_Calling__maf/genome.wustl.edu_OV.IlluminaGA_DNASeq.Level_2.1.4.0/TCGA-13-1482-01.maf.txt
Loaded /xchip/gdac_data/normalized/diced/ov/tracerel__illuminaga_dnaseq__genome_wustl_edu__Level_2__Mutation_Calling__maf/genome.wustl.edu_OV.IlluminaGA_DNASeq.Level_2.1.4.0/TCGA-13-1483-01.maf.txt
Loaded /xchip/gdac_data/normalized/diced/ov/tracerel__illuminaga_dnaseq__genome_wustl_edu__Level_2__Mutation_Calling__maf/genome.wustl.edu_OV.IlluminaGA_DNASeq.Level_2.1.4.0/TCGA-13-1488-01.maf.txt
Loaded /xchip/gdac_data/normalized/diced/ov/tracerel__illuminaga_dnaseq__genome_wustl_edu__Level_2__Mutation_Calling__maf/genome.wustl.edu_OV.IlluminaGA_DNASeq.Level_2.1.4.0/TCGA-13-1489-01.maf.txt
Loaded /xchip/gdac_data/normalized/diced/ov/tracerel__illuminaga_dnaseq__genome_wustl_edu__Level_2__Mutation_Calling__maf/genome.wustl.edu_OV.IlluminaGA_DNASeq.Level_2.1.4.0/TCGA-13-1491-01.maf.txt
Loaded /xchip/gdac_data/normalized/diced/ov/tracerel__illuminaga_dnaseq__genome_wustl_edu__Level_2__Mutation_Calling__maf/genome.wustl.edu_OV.IlluminaGA_DNASeq.Level_2.1.4.0/TCGA-13-1497-01.maf.txt
Loaded /xchip/gdac_data/normalized/diced/ov/tracerel__illuminaga_dnaseq__genome_wustl_edu__Level_2__Mutation_Calling__maf/genome.wustl.edu_OV.IlluminaGA_DNASeq.Level_2.1.4.0/TCGA-13-1498-01.maf.txt
Loaded /xchip/gdac_data/normalized/diced/ov/tracerel__illuminaga_dnaseq__genome_wustl_edu__Level_2__Mutation_Calling__maf/genome.wustl.edu_OV.IlluminaGA_DNASeq.Level_2.1.4.0/TCGA-13-1499-01.maf.txt
Loaded /xchip/gdac_data/normalized/diced/ov/tracerel__illuminaga_dnaseq__genome_wustl_edu__Level_2__Mutation_Calling__maf/genome.wustl.edu_OV.IlluminaGA_DNASeq.Level_2.1.4.0/TCGA-13-1506-01.maf.txt
Loaded /xchip/gdac_data/normalized/diced/ov/tracerel__illuminaga_dnaseq__genome_wustl_edu__Level_2__Mutation_Calling__maf/genome.wustl.edu_OV.IlluminaGA_DNASeq.Level_2.1.4.0/TCGA-13-1507-01.maf.txt
Loaded /xchip/gdac_data/normalized/diced/ov/tracerel__illuminaga_dnaseq__genome_wustl_edu__Level_2__Mutation_Calling__maf/genome.wustl.edu_OV.IlluminaGA_DNASeq.Level_2.1.4.0/TCGA-13-1509-01.maf.txt
Loaded /xchip/gdac_data/normalized/diced/ov/tracerel__illuminaga_dnaseq__genome_wustl_edu__Level_2__Mutation_Calling__maf/genome.wustl.edu_OV.IlluminaGA_DNASeq.Level_2.1.4.0/TCGA-23-1021-01.maf.txt
Loaded /xchip/gdac_data/normalized/diced/ov/tracerel__illuminaga_dnaseq__genome_wustl_edu__Level_2__Mutation_Calling__maf/genome.wustl.edu_OV.IlluminaGA_DNASeq.Level_2.1.4.0/TCGA-23-1022-01.maf.txt
Loaded /xchip/gdac_data/normalized/diced/ov/tracerel__illuminaga_dnaseq__genome_wustl_edu__Level_2__Mutation_Calling__maf/genome.wustl.edu_OV.IlluminaGA_DNASeq.Level_2.1.4.0/TCGA-23-1117-01.maf.txt
Loaded /xchip/gdac_data/normalized/diced/ov/tracerel__illuminaga_dnaseq__genome_wustl_edu__Level_2__Mutation_Calling__maf/genome.wustl.edu_OV.IlluminaGA_DNASeq.Level_2.1.4.0/TCGA-23-1118-01.maf.txt
Loaded /xchip/gdac_data/normalized/diced/ov/tracerel__illuminaga_dnaseq__genome_wustl_edu__Level_2__Mutation_Calling__maf/genome.wustl.edu_OV.IlluminaGA_DNASeq.Level_2.1.4.0/TCGA-23-1123-01.maf.txt
Loaded /xchip/gdac_data/normalized/diced/ov/tracerel__illuminaga_dnaseq__genome_wustl_edu__Level_2__Mutation_Calling__maf/genome.wustl.edu_OV.IlluminaGA_DNASeq.Level_2.1.4.0/TCGA-23-1124-01.maf.txt
Loaded /xchip/gdac_data/normalized/diced/ov/tracerel__illuminaga_dnaseq__genome_wustl_edu__Level_2__Mutation_Calling__maf/genome.wustl.edu_OV.IlluminaGA_DNASeq.Level_2.1.4.0/TCGA-24-0966-01.maf.txt
Loaded /xchip/gdac_data/normalized/diced/ov/tracerel__illuminaga_dnaseq__genome_wustl_edu__Level_2__Mutation_Calling__maf/genome.wustl.edu_OV.IlluminaGA_DNASeq.Level_2.1.4.0/TCGA-24-0980-01.maf.txt
Loaded /xchip/gdac_data/normalized/diced/ov/tracerel__illuminaga_dnaseq__genome_wustl_edu__Level_2__Mutation_Calling__maf/genome.wustl.edu_OV.IlluminaGA_DNASeq.Level_2.1.4.0/TCGA-24-0982-01.maf.txt
Loaded /xchip/gdac_data/normalized/diced/ov/tracerel__illuminaga_dnaseq__genome_wustl_edu__Level_2__Mutation_Calling__maf/genome.wustl.edu_OV.IlluminaGA_DNASeq.Level_2.1.4.0/TCGA-24-1103-01.maf.txt
Loaded /xchip/gdac_data/normalized/diced/ov/tracerel__illuminaga_dnaseq__genome_wustl_edu__Level_2__Mutation_Calling__maf/genome.wustl.edu_OV.IlluminaGA_DNASeq.Level_2.1.4.0/TCGA-24-1104-01.maf.txt
Loaded /xchip/gdac_data/normalized/diced/ov/tracerel__illuminaga_dnaseq__genome_wustl_edu__Level_2__Mutation_Calling__maf/genome.wustl.edu_OV.IlluminaGA_DNASeq.Level_2.1.4.0/TCGA-24-1413-01.maf.txt
Loaded /xchip/gdac_data/normalized/diced/ov/tracerel__illuminaga_dnaseq__genome_wustl_edu__Level_2__Mutation_Calling__maf/genome.wustl.edu_OV.IlluminaGA_DNASeq.Level_2.1.4.0/TCGA-24-1416-01.maf.txt
Loaded /xchip/gdac_data/normalized/diced/ov/tracerel__illuminaga_dnaseq__genome_wustl_edu__Level_2__Mutation_Calling__maf/genome.wustl.edu_OV.IlluminaGA_DNASeq.Level_2.1.4.0/TCGA-24-1417-01.maf.txt
Loaded /xchip/gdac_data/normalized/diced/ov/tracerel__illuminaga_dnaseq__genome_wustl_edu__Level_2__Mutation_Calling__maf/genome.wustl.edu_OV.IlluminaGA_DNASeq.Level_2.1.4.0/TCGA-24-1418-01.maf.txt
Loaded /xchip/gdac_data/normalized/diced/ov/tracerel__illuminaga_dnaseq__genome_wustl_edu__Level_2__Mutation_Calling__maf/genome.wustl.edu_OV.IlluminaGA_DNASeq.Level_2.1.4.0/TCGA-24-1424-01.maf.txt
Loaded /xchip/gdac_data/normalized/diced/ov/tracerel__illuminaga_dnaseq__genome_wustl_edu__Level_2__Mutation_Calling__maf/genome.wustl.edu_OV.IlluminaGA_DNASeq.Level_2.1.4.0/TCGA-24-1425-01.maf.txt
Loaded /xchip/gdac_data/normalized/diced/ov/tracerel__illuminaga_dnaseq__genome_wustl_edu__Level_2__Mutation_Calling__maf/genome.wustl.edu_OV.IlluminaGA_DNASeq.Level_2.1.4.0/TCGA-24-1426-01.maf.txt
Loaded /xchip/gdac_data/normalized/diced/ov/tracerel__illuminaga_dnaseq__genome_wustl_edu__Level_2__Mutation_Calling__maf/genome.wustl.edu_OV.IlluminaGA_DNASeq.Level_2.1.4.0/TCGA-24-1427-01.maf.txt
Loaded /xchip/gdac_data/normalized/diced/ov/tracerel__illuminaga_dnaseq__genome_wustl_edu__Level_2__Mutation_Calling__maf/genome.wustl.edu_OV.IlluminaGA_DNASeq.Level_2.1.4.0/TCGA-24-1428-01.maf.txt
Loaded /xchip/gdac_data/normalized/diced/ov/tracerel__illuminaga_dnaseq__genome_wustl_edu__Level_2__Mutation_Calling__maf/genome.wustl.edu_OV.IlluminaGA_DNASeq.Level_2.1.4.0/TCGA-24-1435-01.maf.txt
Loaded /xchip/gdac_data/normalized/diced/ov/tracerel__illuminaga_dnaseq__genome_wustl_edu__Level_2__Mutation_Calling__maf/genome.wustl.edu_OV.IlluminaGA_DNASeq.Level_2.1.4.0/TCGA-24-1436-01.maf.txt
Loaded /xchip/gdac_data/normalized/diced/ov/tracerel__illuminaga_dnaseq__genome_wustl_edu__Level_2__Mutation_Calling__maf/genome.wustl.edu_OV.IlluminaGA_DNASeq.Level_2.1.4.0/TCGA-24-1463-01.maf.txt
Loaded /xchip/gdac_data/normalized/diced/ov/tracerel__illuminaga_dnaseq__genome_wustl_edu__Level_2__Mutation_Calling__maf/genome.wustl.edu_OV.IlluminaGA_DNASeq.Level_2.1.4.0/TCGA-24-1464-01.maf.txt
Loaded /xchip/gdac_data/normalized/diced/ov/tracerel__illuminaga_dnaseq__genome_wustl_edu__Level_2__Mutation_Calling__maf/genome.wustl.edu_OV.IlluminaGA_DNASeq.Level_2.1.4.0/TCGA-24-1469-01.maf.txt
Loaded /xchip/gdac_data/normalized/diced/ov/tracerel__illuminaga_dnaseq__genome_wustl_edu__Level_2__Mutation_Calling__maf/genome.wustl.edu_OV.IlluminaGA_DNASeq.Level_2.1.4.0/TCGA-24-1470-01.maf.txt
Loaded /xchip/gdac_data/normalized/diced/ov/tracerel__illuminaga_dnaseq__genome_wustl_edu__Level_2__Mutation_Calling__maf/genome.wustl.edu_OV.IlluminaGA_DNASeq.Level_2.1.4.0/TCGA-24-1549-01.maf.txt
Loaded /xchip/gdac_data/normalized/diced/ov/tracerel__illuminaga_dnaseq__genome_wustl_edu__Level_2__Mutation_Calling__maf/genome.wustl.edu_OV.IlluminaGA_DNASeq.Level_2.1.4.0/TCGA-24-1562-01.maf.txt
Loaded /xchip/gdac_data/normalized/diced/ov/tracerel__illuminaga_dnaseq__genome_wustl_edu__Level_2__Mutation_Calling__maf/genome.wustl.edu_OV.IlluminaGA_DNASeq.Level_2.1.4.0/TCGA-24-1563-01.maf.txt
Loaded /xchip/gdac_data/normalized/diced/ov/tracerel__illuminaga_dnaseq__genome_wustl_edu__Level_2__Mutation_Calling__maf/genome.wustl.edu_OV.IlluminaGA_DNASeq.Level_2.1.4.0/TCGA-24-1616-01.maf.txt
Loaded /xchip/gdac_data/normalized/diced/ov/tracerel__illuminaga_dnaseq__genome_wustl_edu__Level_2__Mutation_Calling__maf/genome.wustl.edu_OV.IlluminaGA_DNASeq.Level_2.1.4.0/TCGA-25-1315-01.maf.txt
Loaded /xchip/gdac_data/normalized/diced/ov/tracerel__illuminaga_dnaseq__genome_wustl_edu__Level_2__Mutation_Calling__maf/genome.wustl.edu_OV.IlluminaGA_DNASeq.Level_2.1.4.0/TCGA-25-1316-01.maf.txt
Loaded /xchip/gdac_data/normalized/diced/ov/tracerel__illuminaga_dnaseq__genome_wustl_edu__Level_2__Mutation_Calling__maf/genome.wustl.edu_OV.IlluminaGA_DNASeq.Level_2.1.4.0/TCGA-25-1322-01.maf.txt
Loading MAFs for Baylor
Loaded /xchip/gdac_data/normalized/diced/ov/tracerel__solid_dna__bcm_edu__Level_2__Mutation_Calling__maf/bcm.edu_OV.SOLiD_DNA.Level_2.1.4.0/TCGA-04-1337-01.maf.txt
Loaded /xchip/gdac_data/normalized/diced/ov/tracerel__solid_dna__bcm_edu__Level_2__Mutation_Calling__maf/bcm.edu_OV.SOLiD_DNA.Level_2.1.4.0/TCGA-04-1338-01.maf.txt
Loaded /xchip/gdac_data/normalized/diced/ov/tracerel__solid_dna__bcm_edu__Level_2__Mutation_Calling__maf/bcm.edu_OV.SOLiD_DNA.Level_2.1.4.0/TCGA-04-1350-01.maf.txt
Loaded /xchip/gdac_data/normalized/diced/ov/tracerel__solid_dna__bcm_edu__Level_2__Mutation_Calling__maf/bcm.edu_OV.SOLiD_DNA.Level_2.1.4.0/TCGA-04-1364-01.maf.txt
Loaded /xchip/gdac_data/normalized/diced/ov/tracerel__solid_dna__bcm_edu__Level_2__Mutation_Calling__maf/bcm.edu_OV.SOLiD_DNA.Level_2.1.4.0/TCGA-04-1365-01.maf.txt
Loaded /xchip/gdac_data/normalized/diced/ov/tracerel__solid_dna__bcm_edu__Level_2__Mutation_Calling__maf/bcm.edu_OV.SOLiD_DNA.Level_2.1.4.0/TCGA-04-1514-01.maf.txt
Loaded /xchip/gdac_data/normalized/diced/ov/tracerel__solid_dna__bcm_edu__Level_2__Mutation_Calling__maf/bcm.edu_OV.SOLiD_DNA.Level_2.1.4.0/TCGA-04-1517-01.maf.txt
Loaded /xchip/gdac_data/normalized/diced/ov/tracerel__solid_dna__bcm_edu__Level_2__Mutation_Calling__maf/bcm.edu_OV.SOLiD_DNA.Level_2.1.4.0/TCGA-04-1525-01.maf.txt
Loaded /xchip/gdac_data/normalized/diced/ov/tracerel__solid_dna__bcm_edu__Level_2__Mutation_Calling__maf/bcm.edu_OV.SOLiD_DNA.Level_2.1.4.0/TCGA-04-1530-01.maf.txt
Loaded /xchip/gdac_data/normalized/diced/ov/tracerel__solid_dna__bcm_edu__Level_2__Mutation_Calling__maf/bcm.edu_OV.SOLiD_DNA.Level_2.1.4.0/TCGA-09-1659-01.maf.txt
Loaded /xchip/gdac_data/normalized/diced/ov/tracerel__solid_dna__bcm_edu__Level_2__Mutation_Calling__maf/bcm.edu_OV.SOLiD_DNA.Level_2.1.4.0/TCGA-09-1661-01.maf.txt
Loaded /xchip/gdac_data/normalized/diced/ov/tracerel__solid_dna__bcm_edu__Level_2__Mutation_Calling__maf/bcm.edu_OV.SOLiD_DNA.Level_2.1.4.0/TCGA-09-1662-01.maf.txt
Loaded /xchip/gdac_data/normalized/diced/ov/tracerel__solid_dna__bcm_edu__Level_2__Mutation_Calling__maf/bcm.edu_OV.SOLiD_DNA.Level_2.1.4.0/TCGA-09-1665-01.maf.txt
Loaded /xchip/gdac_data/normalized/diced/ov/tracerel__solid_dna__bcm_edu__Level_2__Mutation_Calling__maf/bcm.edu_OV.SOLiD_DNA.Level_2.1.4.0/TCGA-09-1666-01.maf.txt
Loaded /xchip/gdac_data/normalized/diced/ov/tracerel__solid_dna__bcm_edu__Level_2__Mutation_Calling__maf/bcm.edu_OV.SOLiD_DNA.Level_2.1.4.0/TCGA-09-1669-01.maf.txt
Loaded /xchip/gdac_data/normalized/diced/ov/tracerel__solid_dna__bcm_edu__Level_2__Mutation_Calling__maf/bcm.edu_OV.SOLiD_DNA.Level_2.1.4.0/TCGA-10-0927-01.maf.txt
Loaded /xchip/gdac_data/normalized/diced/ov/tracerel__solid_dna__bcm_edu__Level_2__Mutation_Calling__maf/bcm.edu_OV.SOLiD_DNA.Level_2.1.4.0/TCGA-10-0928-01.maf.txt
Loaded /xchip/gdac_data/normalized/diced/ov/tracerel__solid_dna__bcm_edu__Level_2__Mutation_Calling__maf/bcm.edu_OV.SOLiD_DNA.Level_2.1.4.0/TCGA-10-0937-01.maf.txt
Loaded /xchip/gdac_data/normalized/diced/ov/tracerel__solid_dna__bcm_edu__Level_2__Mutation_Calling__maf/bcm.edu_OV.SOLiD_DNA.Level_2.1.4.0/TCGA-10-0938-01.maf.txt
Loaded /xchip/gdac_data/normalized/diced/ov/tracerel__solid_dna__bcm_edu__Level_2__Mutation_Calling__maf/bcm.edu_OV.SOLiD_DNA.Level_2.1.4.0/TCGA-13-0714-01.maf.txt
Loaded /xchip/gdac_data/normalized/diced/ov/tracerel__solid_dna__bcm_edu__Level_2__Mutation_Calling__maf/bcm.edu_OV.SOLiD_DNA.Level_2.1.4.0/TCGA-13-0717-01.maf.txt
Loaded /xchip/gdac_data/normalized/diced/ov/tracerel__solid_dna__bcm_edu__Level_2__Mutation_Calling__maf/bcm.edu_OV.SOLiD_DNA.Level_2.1.4.0/TCGA-13-0720-01.maf.txt
Loaded /xchip/gdac_data/normalized/diced/ov/tracerel__solid_dna__bcm_edu__Level_2__Mutation_Calling__maf/bcm.edu_OV.SOLiD_DNA.Level_2.1.4.0/TCGA-13-0727-01.maf.txt
Loaded /xchip/gdac_data/normalized/diced/ov/tracerel__solid_dna__bcm_edu__Level_2__Mutation_Calling__maf/bcm.edu_OV.SOLiD_DNA.Level_2.1.4.0/TCGA-13-0730-01.maf.txt
Loaded /xchip/gdac_data/normalized/diced/ov/tracerel__solid_dna__bcm_edu__Level_2__Mutation_Calling__maf/bcm.edu_OV.SOLiD_DNA.Level_2.1.4.0/TCGA-13-0761-01.maf.txt
Loaded /xchip/gdac_data/normalized/diced/ov/tracerel__solid_dna__bcm_edu__Level_2__Mutation_Calling__maf/bcm.edu_OV.SOLiD_DNA.Level_2.1.4.0/TCGA-13-0762-01.maf.txt
Loaded /xchip/gdac_data/normalized/diced/ov/tracerel__solid_dna__bcm_edu__Level_2__Mutation_Calling__maf/bcm.edu_OV.SOLiD_DNA.Level_2.1.4.0/TCGA-13-0792-01.maf.txt
Loaded /xchip/gdac_data/normalized/diced/ov/tracerel__solid_dna__bcm_edu__Level_2__Mutation_Calling__maf/bcm.edu_OV.SOLiD_DNA.Level_2.1.4.0/TCGA-13-0793-01.maf.txt
Loaded /xchip/gdac_data/normalized/diced/ov/tracerel__solid_dna__bcm_edu__Level_2__Mutation_Calling__maf/bcm.edu_OV.SOLiD_DNA.Level_2.1.4.0/TCGA-13-0889-01.maf.txt
Loaded /xchip/gdac_data/normalized/diced/ov/tracerel__solid_dna__bcm_edu__Level_2__Mutation_Calling__maf/bcm.edu_OV.SOLiD_DNA.Level_2.1.4.0/TCGA-13-0900-01.maf.txt
Loaded /xchip/gdac_data/normalized/diced/ov/tracerel__solid_dna__bcm_edu__Level_2__Mutation_Calling__maf/bcm.edu_OV.SOLiD_DNA.Level_2.1.4.0/TCGA-13-0906-01.maf.txt
Loaded /xchip/gdac_data/normalized/diced/ov/tracerel__solid_dna__bcm_edu__Level_2__Mutation_Calling__maf/bcm.edu_OV.SOLiD_DNA.Level_2.1.4.0/TCGA-13-0919-01.maf.txt
Loaded /xchip/gdac_data/normalized/diced/ov/tracerel__solid_dna__bcm_edu__Level_2__Mutation_Calling__maf/bcm.edu_OV.SOLiD_DNA.Level_2.1.4.0/TCGA-13-1407-01.maf.txt
Loaded /xchip/gdac_data/normalized/diced/ov/tracerel__solid_dna__bcm_edu__Level_2__Mutation_Calling__maf/bcm.edu_OV.SOLiD_DNA.Level_2.1.4.0/TCGA-13-1408-01.maf.txt
Loaded /xchip/gdac_data/normalized/diced/ov/tracerel__solid_dna__bcm_edu__Level_2__Mutation_Calling__maf/bcm.edu_OV.SOLiD_DNA.Level_2.1.4.0/TCGA-23-1023-01.maf.txt
Loaded /xchip/gdac_data/normalized/diced/ov/tracerel__solid_dna__bcm_edu__Level_2__Mutation_Calling__maf/bcm.edu_OV.SOLiD_DNA.Level_2.1.4.0/TCGA-23-1024-01.maf.txt
Loaded /xchip/gdac_data/normalized/diced/ov/tracerel__solid_dna__bcm_edu__Level_2__Mutation_Calling__maf/bcm.edu_OV.SOLiD_DNA.Level_2.1.4.0/TCGA-23-1026-01.maf.txt
Loaded /xchip/gdac_data/normalized/diced/ov/tracerel__solid_dna__bcm_edu__Level_2__Mutation_Calling__maf/bcm.edu_OV.SOLiD_DNA.Level_2.1.4.0/TCGA-23-1028-01.maf.txt
Loaded /xchip/gdac_data/normalized/diced/ov/tracerel__solid_dna__bcm_edu__Level_2__Mutation_Calling__maf/bcm.edu_OV.SOLiD_DNA.Level_2.1.4.0/TCGA-23-1120-01.maf.txt
Loaded /xchip/gdac_data/normalized/diced/ov/tracerel__solid_dna__bcm_edu__Level_2__Mutation_Calling__maf/bcm.edu_OV.SOLiD_DNA.Level_2.1.4.0/TCGA-24-0968-01.maf.txt
Loaded /xchip/gdac_data/normalized/diced/ov/tracerel__solid_dna__bcm_edu__Level_2__Mutation_Calling__maf/bcm.edu_OV.SOLiD_DNA.Level_2.1.4.0/TCGA-24-1105-01.maf.txt
Loaded /xchip/gdac_data/normalized/diced/ov/tracerel__solid_dna__bcm_edu__Level_2__Mutation_Calling__maf/bcm.edu_OV.SOLiD_DNA.Level_2.1.4.0/TCGA-24-1544-01.maf.txt
Loaded /xchip/gdac_data/normalized/diced/ov/tracerel__solid_dna__bcm_edu__Level_2__Mutation_Calling__maf/bcm.edu_OV.SOLiD_DNA.Level_2.1.4.0/TCGA-24-1545-01.maf.txt
Loaded /xchip/gdac_data/normalized/diced/ov/tracerel__solid_dna__bcm_edu__Level_2__Mutation_Calling__maf/bcm.edu_OV.SOLiD_DNA.Level_2.1.4.0/TCGA-24-1548-01.maf.txt
Loaded /xchip/gdac_data/normalized/diced/ov/tracerel__solid_dna__bcm_edu__Level_2__Mutation_Calling__maf/bcm.edu_OV.SOLiD_DNA.Level_2.1.4.0/TCGA-24-1553-01.maf.txt
Loaded /xchip/gdac_data/normalized/diced/ov/tracerel__solid_dna__bcm_edu__Level_2__Mutation_Calling__maf/bcm.edu_OV.SOLiD_DNA.Level_2.1.4.0/TCGA-24-1555-01.maf.txt
Loaded /xchip/gdac_data/normalized/diced/ov/tracerel__solid_dna__bcm_edu__Level_2__Mutation_Calling__maf/bcm.edu_OV.SOLiD_DNA.Level_2.1.4.0/TCGA-24-1556-01.maf.txt
Loaded /xchip/gdac_data/normalized/diced/ov/tracerel__solid_dna__bcm_edu__Level_2__Mutation_Calling__maf/bcm.edu_OV.SOLiD_DNA.Level_2.1.4.0/TCGA-24-1557-01.maf.txt
Loaded /xchip/gdac_data/normalized/diced/ov/tracerel__solid_dna__bcm_edu__Level_2__Mutation_Calling__maf/bcm.edu_OV.SOLiD_DNA.Level_2.1.4.0/TCGA-24-1558-01.maf.txt
Loaded /xchip/gdac_data/normalized/diced/ov/tracerel__solid_dna__bcm_edu__Level_2__Mutation_Calling__maf/bcm.edu_OV.SOLiD_DNA.Level_2.1.4.0/TCGA-24-1560-01.maf.txt
Loaded /xchip/gdac_data/normalized/diced/ov/tracerel__solid_dna__bcm_edu__Level_2__Mutation_Calling__maf/bcm.edu_OV.SOLiD_DNA.Level_2.1.4.0/TCGA-24-1567-01.maf.txt
Loaded /xchip/gdac_data/normalized/diced/ov/tracerel__solid_dna__bcm_edu__Level_2__Mutation_Calling__maf/bcm.edu_OV.SOLiD_DNA.Level_2.1.4.0/TCGA-24-1604-01.maf.txt
Loaded /xchip/gdac_data/normalized/diced/ov/tracerel__solid_dna__bcm_edu__Level_2__Mutation_Calling__maf/bcm.edu_OV.SOLiD_DNA.Level_2.1.4.0/TCGA-24-1614-01.maf.txt
Loaded /xchip/gdac_data/normalized/diced/ov/tracerel__solid_dna__bcm_edu__Level_2__Mutation_Calling__maf/bcm.edu_OV.SOLiD_DNA.Level_2.1.4.0/TCGA-25-1317-01.maf.txt
Loaded /xchip/gdac_data/normalized/diced/ov/tracerel__solid_dna__bcm_edu__Level_2__Mutation_Calling__maf/bcm.edu_OV.SOLiD_DNA.Level_2.1.4.0/TCGA-25-1318-01.maf.txt
Loaded /xchip/gdac_data/normalized/diced/ov/tracerel__solid_dna__bcm_edu__Level_2__Mutation_Calling__maf/bcm.edu_OV.SOLiD_DNA.Level_2.1.4.0/TCGA-25-1324-01.maf.txt
Loaded /xchip/gdac_data/normalized/diced/ov/tracerel__solid_dna__bcm_edu__Level_2__Mutation_Calling__maf/bcm.edu_OV.SOLiD_DNA.Level_2.1.4.0/TCGA-25-1623-01.maf.txt
Loaded /xchip/gdac_data/normalized/diced/ov/tracerel__solid_dna__bcm_edu__Level_2__Mutation_Calling__maf/bcm.edu_OV.SOLiD_DNA.Level_2.1.4.0/TCGA-25-1625-01.maf.txt
Loaded /xchip/gdac_data/normalized/diced/ov/tracerel__solid_dna__bcm_edu__Level_2__Mutation_Calling__maf/bcm.edu_OV.SOLiD_DNA.Level_2.1.4.0/TCGA-25-1626-01.maf.txt
Loaded /xchip/gdac_data/normalized/diced/ov/tracerel__solid_dna__bcm_edu__Level_2__Mutation_Calling__maf/bcm.edu_OV.SOLiD_DNA.Level_2.1.4.0/TCGA-25-1627-01.maf.txt
Loaded /xchip/gdac_data/normalized/diced/ov/tracerel__solid_dna__bcm_edu__Level_2__Mutation_Calling__maf/bcm.edu_OV.SOLiD_DNA.Level_2.1.4.0/TCGA-25-1628-01.maf.txt
Loaded /xchip/gdac_data/normalized/diced/ov/tracerel__solid_dna__bcm_edu__Level_2__Mutation_Calling__maf/bcm.edu_OV.SOLiD_DNA.Level_2.1.4.0/TCGA-25-1630-01.maf.txt
Loaded /xchip/gdac_data/normalized/diced/ov/tracerel__solid_dna__bcm_edu__Level_2__Mutation_Calling__maf/bcm.edu_OV.SOLiD_DNA.Level_2.1.4.0/TCGA-25-1631-01.maf.txt
Loaded /xchip/gdac_data/normalized/diced/ov/tracerel__solid_dna__bcm_edu__Level_2__Mutation_Calling__maf/bcm.edu_OV.SOLiD_DNA.Level_2.1.4.0/TCGA-25-1632-01.maf.txt
Loaded /xchip/gdac_data/normalized/diced/ov/tracerel__solid_dna__bcm_edu__Level_2__Mutation_Calling__maf/bcm.edu_OV.SOLiD_DNA.Level_2.1.4.0/TCGA-25-1633-01.maf.txt
Loaded /xchip/gdac_data/normalized/diced/ov/tracerel__solid_dna__bcm_edu__Level_2__Mutation_Calling__maf/bcm.edu_OV.SOLiD_DNA.Level_2.1.4.0/TCGA-25-1634-01.maf.txt
Loaded /xchip/gdac_data/normalized/diced/ov/tracerel__solid_dna__bcm_edu__Level_2__Mutation_Calling__maf/bcm.edu_OV.SOLiD_DNA.Level_2.1.4.0/TCGA-25-1635-01.maf.txt
Loaded /xchip/gdac_data/normalized/diced/ov/tracerel__solid_dna__bcm_edu__Level_2__Mutation_Calling__maf/bcm.edu_OV.SOLiD_DNA.Level_2.1.4.0/TCGA-36-1568-01.maf.txt
Loaded /xchip/gdac_data/normalized/diced/ov/tracerel__solid_dna__bcm_edu__Level_2__Mutation_Calling__maf/bcm.edu_OV.SOLiD_DNA.Level_2.1.4.0/TCGA-36-1569-01.maf.txt
Loaded /xchip/gdac_data/normalized/diced/ov/tracerel__solid_dna__bcm_edu__Level_2__Mutation_Calling__maf/bcm.edu_OV.SOLiD_DNA.Level_2.1.4.0/TCGA-36-1570-01.maf.txt
Loaded /xchip/gdac_data/normalized/diced/ov/tracerel__solid_dna__bcm_edu__Level_2__Mutation_Calling__maf/bcm.edu_OV.SOLiD_DNA.Level_2.1.4.0/TCGA-36-1571-01.maf.txt
Loaded /xchip/gdac_data/normalized/diced/ov/tracerel__solid_dna__bcm_edu__Level_2__Mutation_Calling__maf/bcm.edu_OV.SOLiD_DNA.Level_2.1.4.0/TCGA-36-1574-01.maf.txt
Loaded /xchip/gdac_data/normalized/diced/ov/tracerel__solid_dna__bcm_edu__Level_2__Mutation_Calling__maf/bcm.edu_OV.SOLiD_DNA.Level_2.1.4.0/TCGA-36-1575-01.maf.txt
Loaded /xchip/gdac_data/normalized/diced/ov/tracerel__solid_dna__bcm_edu__Level_2__Mutation_Calling__maf/bcm.edu_OV.SOLiD_DNA.Level_2.1.4.0/TCGA-36-1576-01.maf.txt
Loaded /xchip/gdac_data/normalized/diced/ov/tracerel__solid_dna__bcm_edu__Level_2__Mutation_Calling__maf/bcm.edu_OV.SOLiD_DNA.Level_2.1.4.0/TCGA-36-1577-01.maf.txt
Loaded /xchip/gdac_data/normalized/diced/ov/tracerel__solid_dna__bcm_edu__Level_2__Mutation_Calling__maf/bcm.edu_OV.SOLiD_DNA.Level_2.1.4.0/TCGA-36-1578-01.maf.txt
Loaded /xchip/gdac_data/normalized/diced/ov/tracerel__solid_dna__bcm_edu__Level_2__Mutation_Calling__maf/bcm.edu_OV.SOLiD_DNA.Level_2.1.4.0/TCGA-36-1580-01.maf.txt
Loaded /xchip/gdac_data/normalized/diced/ov/tracerel__solid_dna__bcm_edu__Level_2__Mutation_Calling__maf/bcm.edu_OV.SOLiD_DNA.Level_2.1.4.0/TCGA-57-1582-01.maf.txt
Loaded /xchip/gdac_data/normalized/diced/ov/tracerel__solid_dna__bcm_edu__Level_2__Mutation_Calling__maf/bcm.edu_OV.SOLiD_DNA.Level_2.1.4.0/TCGA-57-1583-01.maf.txt
Loaded /xchip/gdac_data/normalized/diced/ov/tracerel__solid_dna__bcm_edu__Level_2__Mutation_Calling__maf/bcm.edu_OV.SOLiD_DNA.Level_2.1.4.0/TCGA-57-1584-01.maf.txt
Concatenating structs...

                         BAM_file: [316]
                           Center: [316]
                       Chromosome: [316]
                     End_position: [316]
                   Entrez_Gene_Id: [316]
                      Hugo_Symbol: [316]
           Match_Norm_Seq_Allele1: [316]
           Match_Norm_Seq_Allele2: [316]
    Match_Norm_Validation_Allele1: [316]
    Match_Norm_Validation_Allele2: [316]
      Matched_Norm_Sample_Barcode: [316]
                  Mutation_Status: [316]
                       NCBI_Build: [316]
                 Reference_Allele: [316]
                            Score: [316]
                  Sequence_Source: [316]
                        Sequencer: [316]
                 Sequencing_Phase: [316]
                   Start_position: [316]
                           Strand: [316]
             Tumor_Sample_Barcode: [316]
                Tumor_Seq_Allele1: [316]
                Tumor_Seq_Allele2: [316]
         Tumor_Validation_Allele1: [316]
         Tumor_Validation_Allele2: [316]
                Validation_Method: [316]
                Validation_Status: [316]
           Variant_Classification: [316]
                     Variant_Type: [316]
              Verification_Status: [316]
                              chr: [316]
                   classification: [316]
                          context: [316]
                          dataset: [316]
                         dbSNP_RS: [316]
                 dbSNP_Val_Status: [316]
                              end: [316]
                             gene: [316]
                          patient: [316]
                       ref_allele: [316]
                            start: [316]
                      tum_allele1: [316]
                      tum_allele2: [316]
                             type: [316]
                        ----TOTAL: [13904]
Calling preprocess_mutations...
Validation_Status:

      Unknown: [13509]
        Valid: [6710]
    ----TOTAL: [20219]
Not enforcing any target list.
Collapsing adjacent mutations:
Collapsed 20219 muts to 20219 muts
Getting context for chr: 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 23 24 
Done.
Saved OV.mutation_preprocessing_report.txt
Saved OV.maf
Total of 316 patients had both MAF and WIG data.
Saved OV.patients.txt
Saved OV.coverage.prepare.txt
libdir: /xchip/tcga/gdac_prod/applications/tcga-gdac-genepattern/gp-3.2.4-9272/Tomcat/../../taskLib/MutSigPreprocess.63.3133/
LD_LIBRARY_PATH is .:/broad/software/nonfree/Linux/redhat_5_x86_64/pkgs/matlab_2009a/runtime/glnxa64:/broad/software/nonfree/Linux/redhat_5_x86_64/pkgs/matlab_2009a/bin/glnxa64:/broad/software/nonfree/Linux/redhat_5_x86_64/pkgs/matlab_2009a/sys/os/glnxa64:/broad/software/nonfree/Linux/redhat_5_x86_64/pkgs/matlab_2009a/sys/java/jre/glnxa64/jre/lib/amd64/native_threads:/broad/software/nonfree/Linux/redhat_5_x86_64/pkgs/matlab_2009a/sys/java/jre/glnxa64/jre/lib/amd64/server:/broad/software/nonfree/Linux/redhat_5_x86_64/pkgs/matlab_2009a/sys/java/jre/glnxa64/jre/lib/amd64/client:/broad/software/nonfree/Linux/redhat_5_x86_64/pkgs/matlab_2009a/sys/java/jre/glnxa64/jre/lib/amd64
MCR_CACHE_ROOT is  /xchip/cga/gdac-prod/tcga-gdac-genepattern/jobResults/48882
mFile: fh_MutSigPreprocess
executing: /xchip/tcga/gdac_prod/applications/tcga-gdac-genepattern/gp-3.2.4-9272/Tomcat/../../taskLib/MutSigPreprocess.63.3133/fh_MutSigPreprocess -i OV -b hg18 -t /xchip/cga1/lawrence/capture/RefSeq_exons_hg18_june2010_fix1.txt -c /xchip/cga1/lawrence/db/context65 -cw /xchip/cga1/lawrence/db/context65/RefSeq_exons_hg18_june2010_terr_only.wig -cat 4 -maf1 /xchip/tcga/gdac_prod/applications/tcga-gdac-genepattern/gp-3.2.4-9272/temp/attachments/cgaadm_deadline/Axis1603589019805797990.att_dependentsValues6255852515212334605.tsv -maf2 /xchip/tcga/gdac_prod/applications/tcga-gdac-genepattern/gp-3.2.4-9272/temp/attachments/cgaadm_deadline/Axis2934168900587697565.att_dependentsValues5746295141951644772.tsv -maf3 /xchip/tcga/gdac_prod/applications/tcga-gdac-genepattern/gp-3.2.4-9272/temp/attachments/cgaadm_deadline/Axis5946378353197647577.att_dependentsValues3841058003365010492.tsv -maflabel1 Broad -maflabel2 WashU -maflabel3 Baylor -wig1 /xchip/tcga/gdac_prod/applications/tcga-gdac-genepattern/gp-3.2.4-9272/temp/attachments/cgaadm_deadline/Axis2974210169314268277.att_dependentsValues58081437473883122.tsv -wig2 /xchip/tcga/gdac_prod/applications/tcga-gdac-genepattern/gp-3.2.4-9272/temp/attachments/cgaadm_deadline/Axis4865342128075767772.att_dependentsValues590886876094437563.tsv -wig3 /xchip/tcga/gdac_prod/applications/tcga-gdac-genepattern/gp-3.2.4-9272/temp/attachments/cgaadm_deadline/Axis1801401541423636068.att_dependentsValues4011045323142286039.tsv -p /xchip/cga1/reference/mutsig_params/MutSig1.5.params.txt
