index	chromosome	region_start	region_end	peak_start	peak_end	enlarged_peak_start	enlarged_peak_end	n_genes_in_region	genes_in_region	n_genes_in_peak	genes_in_peak	n_genes_on_chip	genes_on_chip	top 3
1	1	144101527	152844239	149047016	149047411	148783980	149186245	9	ARNT,CTSK,CTSS,ENSA,MCL1,SETDB1,ADAMTSL4,GOLPH3L,HORMAD1,	1	CTSK,	
2	1	153346301	155168905	154308287	154314935	154037843	154393992	15	LMNA,RIT1,SSR2,ARHGEF2,KIAA0907,SYT11,ROBLD3,GON4L,UBQLN4,RAB25,SEMA4A,MEX3A,RXFP4,SCARNA4,SNORA42,	2	RAB25,MEX3A,	
3	1	43247132	44070260	43854917	43933400	42417511	45582678	63	ATP6V0B,CDC20,PLK3,DPH2,MPL,MUTYH,YBX1,PTPRF,RPS8,ST3GAL3,SLC2A1,SLC6A9,TIE1,UROD,PTCH2,B4GALT2,EIF2B3,ARTN,IPO13,KDM4A,TESK2,PPIH,EBNA1BP2,KIF2C,FOXJ3,KIAA0467,SNORD55,ZNF691,RNF220,DMAP1,ZSWIM5,LEPRE1,ELOVL1,ERI3,C1orf50,TMEM53,HECTD3,PPCS,HYI,ZMYND12,HPDL,SNORD46,SNORD38A,SNORD38B,MED8,TOE1,ERMAP,KLF17,TMEM125,CLDN19,WDR65,C1orf210,C1orf84,CCDC24,BTBD19,BEST4,RIMKLA,C1orf228,TCTEX1D4,CCDC23,LOC400752,FAM183A,CCDC30,	2	PTPRF,KDM4A,	
4	1	202780000	202787165	202780760	202781578	202780715	202781582	1	MDM4,	1	MDM4,	
5	2	113527418	114106247	113706608	113757211	113611776	114040538	5	PAX8,PSD4,CBWD2,FOXD4L1,LOC654433,	2	PAX8,LOC654433,	
6	2	9157605	9307263	9209452	9293513	2784	29140174	168	hsa-mir-1301,ACP1,ADCY3,APOB,RHOB,CAD,CENPA,DDX1,DNMT3A,DTNB,E2F6,FKBP1B,FOSL2,FTHL3P,GCKR,GTF3C2,HADHA,HADHB,HPCAL1,ID2,KCNF1,KCNK3,KCNS3,KHK,KIF3C,MATN3,MPV17,MYCN,ODC1,POMC,PPM1G,PPP1CB,RPS7,RRM2,SDC1,SOX11,ADAM17,TPO,TSSC1,UCN,VSNL1,SLC30A3,PXDN,KLF11,NCOA1,ASAP2,SLC5A6,EIF2B4,TAF1B,ITGB1BP1,OTOF,ROCK2,TP53I3,MRPL33,BRE,GREB1,LAPTM4A,RNF144A,SNX17,SUPT7L,PREB,PDIA6,MYCNOS,CGREF1,RAB10,YWHAQ,EMILIN1,GPN1,MAPRE3,SLC4A1AP,EFR3B,MYT1L,WDR43,LPIN1,PUM2,NTSR2,IFT172,SH3YL1,SNORD53,TRIB2,GRHL1,NRBP1,ITSN2,TTC15,DNAJC27,C2orf28,NBAS,SF3B14,CPSF3,SNTG2,ATAD2B,TMEM214,C2orf18,TRMT61B,ASXL2,ADI1,ALLC,DPYSL5,TRIM54,KIDINS220,WDR35,RDH14,AGBL5,C2orf43,RBKS,HS1BP3,FNDC4,COLEC11,CENPO,CCDC121,SMC6,NOL10,C2orf44,FAM49A,C2orf16,ZNF512,ABHD1,SELI,RSAD2,C2orf39,NT5C1B,KLHL29,CMPK2,MBOAT2,TMEM18,CIB4,OSR1,TTC32,ZNF513,C2orf50,PQLC3,LOC150622,TCF23,PLB1,FAM84A,GDF7,GPR113,FAM179A,UBXN2A,CYS1,KRTCAP3,SPDYA,ATP6V1C2,RNASEH1,FAM150B,DNAJC5G,IAH1,C2orf70,C2orf53,LOC339788,MSGN1,GEN1,C2orf48,PFN4,LOC375190,MFSD2B,C2orf71,C2orf90,C2orf79,LOC400940,FAM110C,C2orf84,SNORD92,RAD51AP2,LOC730811,LOC100128731,LOC100302650,SNORA80B,	1	ASAP2,	
7	3	169243258	199248630	170153324	170198225	170100783	170222544	0	[MECOM]	0	[MECOM]	
8	3	13450995	13915232	13692502	13701335	13692253	13701737	1	LOC285375,	1	LOC285375,	
9	3	169243258	199248630	180434498	180434748	180434483	180434786	1	PIK3CA,	1	PIK3CA,	
10	3	169243258	199248630	170827646	170963965	170740457	171011071	5	MECOM,TERC,MYNN,ARPM1,LRRC34,	1	MECOM,	
11	4	1395675	2105658	1804220	1848800	1402012	1850498	7	FGFR3,LETM1,WHSC1,SLBP,TACC3,TMEM129,FAM53A,	7	FGFR3,LETM1,WHSC1,SLBP,TACC3,TMEM129,FAM53A,	
12	4	55270248	55282741	55270248	55277210	55270175	55277232	1	KIT,	1	KIT,	
13	6	11209904	11840085	11403269	11424226	11340735	11635921	1	NEDD9,	1	NEDD9,	
14	6	104968006	107666722	107111858	107147668	104962863	109211811	23	hsa-mir-587,AIM1,PRDM1,FOXO3,PREP,NR2E1,SNX3,ATG5,BVES,SEC63,OSTM1,C6orf203,SOBP,QRSL1,PDSS2,HACE1,BEND3,POPDC3,RTN4IP1,LACE1,SCML4,LIN28B,LOC553137,	2	AIM1,RTN4IP1,	
15	6	152030993	152063475	152030993	152059651	151967476	152084128	2	ESR1,C6orf97,	1	ESR1,	
16	6	18584501	18630299	18584501	18623702	18582744	18628905	0	[RNF144B]	0	[RNF144B]	
17	7	99364393	100015872	99499740	99509783	99376777	99939853	31	hsa-mir-106b,AZGP1,MCM7,PMS2L1,TAF6,ZNF3,ZKSCAN1,ZSCAN21,AP4M1,STAG3,COPS6,PILRB,PILRA,ZCWPW1,C7orf43,MEPCE,PVRIG,GAL3ST4,TSC22D4,C7orf47,GPC2,C7orf51,CNPY4,MBLAC1,GATS,C7orf59,C7orf61,MIR106B,MIR25,MIR93,SPDYE3,	2	ZNF3,ZSCAN21,	
18	8	123166776	136633128	129612579	129639246	129609418	129641707	0	[hsa-mir-1208]	0	[hsa-mir-1208]	
19	8	39928509	47343559	42088805	42110733	41593447	42321197	10	hsa-mir-486,ANK1,IKBKB,PLAT,POLB,MYST3,AP3M2,AGPAT6,NKX6-3,MIR486,	0	[AP3M2]	
20	8	123166776	136633128	128823745	128839734	128810150	128850433	1	MYC,	1	MYC,	
21	8	36575487	39191248	38506548	38507787	38112432	38507933	10	FGFR1,STAR,ASH2L,BAG4,DDHD2,LSM1,WHSC1L1,PPAPDC1B,LETM2,C8orf86,	1	C8orf86,	
22	9	3539665	3997769	3742580	3749215	3604469	3980883	2	C9orf70,GLIS3,	0	[GLIS3]	
23	10	75065031	77078941	76596709	76626639	76373993	76741892	6	VDAC2,MYST4,DUSP13,COMTD1,SAMD8,DUPD1,	1	SAMD8,	
24	11	66146262	68082812	66868372	66892422	66850436	66981170	12	PPP1CA,PTPRCAP,RAD9A,RPS6KB2,CLCF1,CABP4,CORO1B,ATPGD1,POLD4,TBC1D10C,GPR152,LOC100130987,	3	CLCF1,POLD4,LOC100130987,	
25	11	64649046	65300403	65058975	65092281	64984236	65093395	3	LTBP3,SCYL1,MALAT1,	3	LTBP3,SCYL1,MALAT1,	
26	11	46314793	46439761	46375374	46426948	46258761	46825064	12	ARHGAP1,CHRM4,F2,MDK,DGKZ,KIAA0652,CKAP5,AMBRA1,ZNF408,CREB3L1,HARBI1,SNORD67,	4	CHRM4,MDK,DGKZ,AMBRA1,	
27	12	54466914	54933255	54686063	54719243	54676903	54723884	4	RAB5B,RPS26,SUOX,IKZF4,	3	RPS26,SUOX,IKZF4,	
28	12	24950132	24979879	24950132	24971198	24620623	25229541	6	BCAT1,LRMP,CASC1,DAD1L,C12orf67,C12orf77,	2	BCAT1,DAD1L,	
29	14	76370527	76639994	76439210	76475372	76375888	76479635	1	C14orf166B,	0	[C14orf166B]	
30	16	29812563	31488963	30797963	30808258	30764018	30911345	8	CTF1,BCL7C,SETD1A,FBXL19,HSD3B7,ORAI3,STX1B,NCRNA00095,	1	BCL7C,	
31	17	34162198	35644535	35144591	35144591	35058384	35153214	7	ERBB2,GRB7,PNMT,TCAP,STARD3,C17orf37,PGAP3,	3	ERBB2,GRB7,C17orf37,	
32	17	43772775	44062556	43882717	43900457	43819738	43993607	4	HOXB1,HOXB2,HOXB3,SKAP1,	0	[SKAP1]	
33	17	23694573	24364732	24112055	24117668	24045498	24136559	12	RPL23A,SUPT6H,TRAF4,SNORD4B,SNORD4A,SNORD42B,SNORD42A,C17orf63,RAB34,TLCD1,PROCA1,NEK8,	1	C17orf63,	
34	17	20112735	20606274	20112735	20145448	20104164	22325143	14	KCNJ12,MAP2K3,TMEM11,USP22,DHRS7B,CYTSB,C17orf103,FAM27L,FLJ36000,LGALS9B,CCDC144NL,C17orf51,CCDC144C,MGC102966,	4	CYTSB,LGALS9B,CCDC144C,MGC102966,	
35	19	32760928	39564222	35007110	35046343	34997524	35047419	1	CCNE1,	1	CCNE1,	
36	19	10016199	11212592	10744126	10748626	10725842	10811439	4	hsa-mir-199a-1,DNM2,TMED1,MIR199A1,	1	DNM2,	
37	20	29302279	30648260	30231056	30260591	30195228	30290174	5	hsa-mir-1825,PLAGL2,TM9SF4,POFUT1,TSPYL3,	3	PLAGL2,POFUT1,TSPYL3,	
38	20	45274325	45706692	45363783	45486904	45340900	45512957	2	ZMYND8,LOC100131496,	2	ZMYND8,LOC100131496,	
