Summary: Broad GDAC Ingested TCGA Data

Summary of TCGA Tumor Data
Ingested into Broad GDAC Pipeline
2012_03_21 analyses Run

Tumor	BCR	Clinical	CN	Methylation	mRNA	mRNAseq	miR	miRseq	MAF

BLCA	89	65	35	78	0	0	0	54	28
BRCA	864	844	781	808	529	751	0	781	507
CESC	99	12	36	0	0	0	0	8	36
COADREAD	591	591	564	584	224	83	0	255	224
DLBC	27	0	0	0	0	0	0	0	0
GBM	596	561	537	287	542	0	491	0	276
HNSC	294	255	165	292	0	13	0	89	0
KIRC	502	502	489	500	72	469	0	463	327
KIRP	135	84	43	117	16	14	0	16	0
LAML	202	200	0	192	0	179	0	187	199
LGG	144	140	80	0	27	0	0	30	0
LIHC	84	47	53	0	0	17	0	28	0
LNNH	2	0	0	0	0	0	0	0	0
LUAD	372	273	205	347	32	106	0	95	147
LUSC	290	272	211	282	154	220	0	202	178
OV	592	580	547	551	568	0	564	46	316
PAAD	48	0	14	30	0	0	0	0	0
PRAD	153	0	82	153	0	0	0	63	0
SKCM	253	0	0	240	0	0	0	0	0
STAD	178	166	132	133	0	57	0	123	133
THCA	274	73	85	230	0	0	0	45	0
UCEC	462	424	363	373	54	266	0	359	239
PANCANCER	6251	5089	4422	5197	2218	2175	1055	2844	2610