Broad GDAC Analyses Status
analyses__2012_04_25__lihc_00 Run for Tumor Type: LIHC

TumorBCRClinicalCNMethylationmRNAmRNAseqmiRmiRseqRPPAMAF
LIHC845553001702800

Note that the links below require Broad internal Firehose login credentials.

PipelineNotRunnableRunnableInProcessSuccessfulUnsuccessful
1Aggregate_Clusters01000
2CopyNumber_GeneBySample00010
3CopyNumber_Gistic200010
4CopyNumber_Preprocess00010
5Correlate_CopyNumber_vs_miR10000
6Correlate_CopyNumber_vs_mRNA10000
7Correlate_Methylation_vs_mRNA10000
8Methylation_Clustering_CNMF10000
9Methylation_Preprocess10000
10miRseq_Clustering_CNMF00010
11miRseq_Clustering_Consensus00010
12miRseq_Preprocess00010
13miR_Clustering_CNMF10000
14miR_Clustering_Consensus10000
15miR_FindDirectTargets10000
16mRNAseq_Clustering_CNMF10000
17mRNAseq_Clustering_Consensus10000
18mRNAseq_Preprocess00001
19mRNA_Clustering_CNMF10000
20mRNA_Clustering_Consensus10000
21mRNA_Preprocess_Median10000
22Mutation_Assessor10000
23Mutation_Significance10000
24Pathway_FindEnrichedGenes10000
25Pathway_Paradigm_Expression10000
26Pathway_Paradigm_Expression_CopyNumber10000
27Pathway_Paradigm_Lite10000
Total191061

This table generated on Thu May 24 17:32:28 2012