This is the analysis overview for Firehose run "25 April 2012".
Note: These results are offered to the community as an additional reference point, enabling a wide range of cancer biologists, clinical investigators, and genome and computational scientists to easily incorporate TCGA into the backdrop of ongoing research. While every effort is made to ensure that Firehose input data and algorithms are of the highest possible quality, these analyses have not been reviewed by domain experts.
A total of 167 reports are available for analysis run "25 April 2012". No reports were found for the following cancer types: Lymphoid Neoplasm Diffuse Large B-cell Lymphoma, Lymphoid Neoplasm Non-Hodgkins Lymphoma, Sarcoma, Skin Cutaneous Melanoma
Table 1. Click "Browse" to view reports for a cancer type of interest. If you prefer to view reports on your own computer you may download a ZIP archive containing all reports for a cancer type by clicking "Download".
| Cancer Type | Abbreviation | Reports | HTML | ZIP |
|---|---|---|---|---|
| Bladder Urothelial Carinoma | BLCA | 6 | Browse | Download |
| Breast Invasive Carcinoma | BRCA | 14 | Browse | Download |
| Cervical Squamous Cell Carcinoma | CESC | 2 | Browse | Download |
| Colon/Rectal Adenocarcinoma | COADREAD | 14 | Browse | Download |
| Lymphoid Neoplasm Diffuse Large B-cell Lymphoma | DLBC | 0 | NA | NA |
| Glioblastoma Multiforme | GBM | 14 | Browse | Download |
| Head and Neck Squamous Cell Carcinoma | HNSC | 5 | Browse | Download |
| Kidney Renal Clear Cell Carcinoma | KIRC | 13 | Browse | Download |
| Kidney Renal Papillary Cell Carcinoma | KIRP | 9 | Browse | Download |
| Acute Myeloid Leukemia | LAML | 4 | Browse | Download |
| Brain Lower Grade Glioma | LGG | 8 | Browse | Download |
| Liver Hepatocellular Carcinoma | LIHC | 3 | Browse | Download |
| Lymphoid Neoplasm Non-Hodgkins Lymphoma | LNNH | 0 | NA | NA |
| Lung Adenocarcinoma | LUAD | 13 | Browse | Download |
| Lung Squamous Cell Carcinoma | LUSC | 14 | Browse | Download |
| Ovarian Serous Cystadenocarcinoma | OV | 16 | Browse | Download |
| Pancreatic Adenocarcinoma | PAAD | 1 | Browse | Download |
| PANCANCER | PANCANCER | 5 | Browse | Download |
| Prostate Adenocarcinoma | PRAD | 3 | Browse | Download |
| Sarcoma | SARC | 0 | NA | NA |
| Skin Cutaneous Melanoma | SKCM | 0 | NA | NA |
| Stomach Adenocarcinoma | STAD | 7 | Browse | Download |
| Thyroid Adenocarcinoma | THCA | 3 | Browse | Download |
| Uterine Corpus Endometrioid Carcinoma | UCEC | 13 | Browse | Download |
An archive containing all reports for the 25 April 2012 run is available for download. Links to archives with reports for individual cancer types are included in Table 1.
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Firehose Directory = /local/cga-fh/tcga-gdac
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Run Prefix = analyses__2012_04_25
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Summary Report Date = Thu May 24 07:47:21 2012
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Protection = FALSE