Pathway Nof Genes Nof Marker Enrichment P value Q value Marker Genes in Pathway Pathway Info BIOCARTA_PML_PATHWAY 17 8 2.41 0 0.0059 SP100,TNF,CREBBP,PAX3,SIRT1,DAXX,SUMO1,PRAM1 http://www.broadinstitute.org/gsea/msigdb/cards/BIOCARTA_PML_PATHWAY KEGG_ANTIGEN_PROCESSING_AND_PRESENTATION 89 19 1.45 0 0.0059 KLRC2,RFXAP,B2M,HLA-A,HLA-B,HLA-E,HLA-DQA2,HLA-G,KIR3DL2,CALR,CTSL1,TAP2,IFNA5,TAP1,HLA-DRB5,HSPA4,HSPA5,HSPA8,KIR2DS1 http://www.broadinstitute.org/gsea/msigdb/cards/KEGG_ANTIGEN_PROCESSING_AND_PRESENTATION BIOCARTA_IL3_PATHWAY 15 6 2.18 0.001 0.1051 IL3,MAP2K1,RAF1,FOS,SOS1,SHC1 http://www.broadinstitute.org/gsea/msigdb/cards/BIOCARTA_IL3_PATHWAY KEGG_GLYOXYLATE_AND_DICARBOXYLATE_METABOLISM 16 6 2.09 0.0015 0.1169 ACO1,CS,AFMID,GLYCTK,MTHFD2,MDH1 http://www.broadinstitute.org/gsea/msigdb/cards/KEGG_GLYOXYLATE_AND_DICARBOXYLATE_METABOLISM KEGG_RNA_DEGRADATION 55 12 1.31 0.0022 0.1328 CNOT8,EDC3,LSM5,EXOSC9,EXOSC1,XRN1,XRN2,PAPOLA,DCP1B,DCP2,DCP1A,HSPD1 http://www.broadinstitute.org/gsea/msigdb/cards/KEGG_RNA_DEGRADATION BIOCARTA_CDMAC_PATHWAY 16 5 1.82 0.0093 0.1686 TNF,MAP2K1,RAF1,FOS,MYC http://www.broadinstitute.org/gsea/msigdb/cards/BIOCARTA_CDMAC_PATHWAY BIOCARTA_ERK_PATHWAY 28 7 1.5 0.0083 0.1686 MKNK1,SOS1,SHC1,MYC,MAP2K1,RAF1,RPS6KA1 http://www.broadinstitute.org/gsea/msigdb/cards/BIOCARTA_ERK_PATHWAY BIOCARTA_EIF_PATHWAY 16 5 1.92 0.0069 0.1686 EEF2,EIF4G2,EIF4G3,EIF2S1,EIF4A1 http://www.broadinstitute.org/gsea/msigdb/cards/BIOCARTA_EIF_PATHWAY BIOCARTA_PPARA_PATHWAY 58 11 1.13 0.0087 0.1686 PDGFA,EHHADH,PRKAR2B,MYC,MED1,ME1,TNF,MRPL11,NR1H3,CPT1B,CREBBP http://www.broadinstitute.org/gsea/msigdb/cards/BIOCARTA_PPARA_PATHWAY KEGG_LYSINE_DEGRADATION 44 9 1.25 0.01 0.1686 EHHADH,OGDHL,ACAT1,PLOD3,AASDH,DLST,EHMT2,DOT1L,SETD7 http://www.broadinstitute.org/gsea/msigdb/cards/KEGG_LYSINE_DEGRADATION KEGG_TRYPTOPHAN_METABOLISM 40 9 1.42 0.0043 0.1686 EHHADH,OGDHL,ACAT1,AFMID,TDO2,CAT,MAOB,CYP1A2,ABP1 http://www.broadinstitute.org/gsea/msigdb/cards/KEGG_TRYPTOPHAN_METABOLISM KEGG_METABOLISM_OF_XENOBIOTICS_BY_CYTOCHROME_P450 70 13 1.09 0.0056 0.1686 CYP3A43,GSTM1,GSTM2,GSTM4,CYP1A2,ALDH3B1,UGT2B17,CYP2B6,ADH5,ADH6,GSTA4,EPHX1,MGST1 http://www.broadinstitute.org/gsea/msigdb/cards/KEGG_METABOLISM_OF_XENOBIOTICS_BY_CYTOCHROME_P450 KEGG_DRUG_METABOLISM_CYTOCHROME_P450 72 13 1.05 0.0072 0.1686 CYP3A43,GSTM1,GSTM2,GSTM4,CYP1A2,ALDH3B1,UGT2B17,CYP2B6,ADH5,ADH6,GSTA4,MAOB,MGST1 http://www.broadinstitute.org/gsea/msigdb/cards/KEGG_DRUG_METABOLISM_CYTOCHROME_P450 KEGG_WNT_SIGNALING_PATHWAY 151 23 0.8 0.0049 0.1686 PPP2R5B,WNT3A,WNT10B,CHP2,PPP2R5E,WNT5A,CREBBP,PORCN,SFRP4,RHOA,MYC,PPP2R1B,CTBP2,SUMO1,SIAH1,NKD1,PPP3R1,NFAT5,FZD8,FZD2,FZD5,TBL1X,WNT7A http://www.broadinstitute.org/gsea/msigdb/cards/KEGG_WNT_SIGNALING_PATHWAY KEGG_NATURAL_KILLER_CELL_MEDIATED_CYTOTOXICITY 137 20 0.79 0.0095 0.1686 MICB,KLRC2,CHP2,HLA-A,HLA-B,HLA-E,HLA-G,KIR3DL2,IFNA5,MAP2K1,KIR2DS1,SHC1,TNFRSF10A,TNFRSF10C,TNF,PPP3R1,SOS1,NFAT5,RAF1,FYN http://www.broadinstitute.org/gsea/msigdb/cards/KEGG_NATURAL_KILLER_CELL_MEDIATED_CYTOTOXICITY KEGG_OLFACTORY_TRANSDUCTION 389 48 0.48 0.0076 0.1686 OR51L1,OR2S2,OR1S1,OR52K2,OR2T2,GUCY2D,OR7E24,OR2W1,OR10AD1,OR5V1,OR4N4,OR4N2,OR10R2,OR2A12,OR5T2,OR4P4,OR10S1,ARRB2,OR51B6,OR51A4,OR10V1,OR2T12,OR1L6,OR51F2,OR1L3,OR52I2,OR4X2,OR1E1,OR13F1,OR13H1,OR6B1,OR8D2,OR10A4,OR7G3,OR2H2,OR2G2,OR13D1,OR4D10,OR5M9,OR4K1,OR52W1,OR6K2,OR4C15,OR10J5,OR10J1,OR10G2,OR10H3,OR3A3 http://www.broadinstitute.org/gsea/msigdb/cards/KEGG_OLFACTORY_TRANSDUCTION KEGG_VIRAL_MYOCARDITIS 73 13 1.14 0.0043 0.1686 ACTG1,HLA-A,HLA-B,MYH9,HLA-E,HLA-DQA2,HLA-G,EIF4G2,EIF4G3,MYH7B,SGCA,HLA-DRB5,FYN http://www.broadinstitute.org/gsea/msigdb/cards/KEGG_VIRAL_MYOCARDITIS WNT_SIGNALING 89 15 0.93 0.0089 0.1686 WNT3A,B2M,MYC,CTBP2,SUMO1,FSHB,WNT5A,NKD1,FZD8,FZD2,FZD5,PORCN,CSNK1D,SFRP4,WNT7A http://www.broadinstitute.org/gsea/msigdb/cards/WNT_SIGNALING BIOCARTA_IGF1R_PATHWAY 23 6 1.56 0.0115 0.1773 MAP2K1,RAF1,PRKAR2B,RPS6KA1,SOS1,SHC1 http://www.broadinstitute.org/gsea/msigdb/cards/BIOCARTA_IGF1R_PATHWAY KEGG_CITRATE_CYCLE_TCA_CYCLE 32 7 1.4 0.0122 0.1773 OGDHL,SUCLA2,DLST,ACO1,CS,DLAT,MDH1 http://www.broadinstitute.org/gsea/msigdb/cards/KEGG_CITRATE_CYCLE_TCA_CYCLE KEGG_GRAFT_VERSUS_HOST_DISEASE 42 8 1.29 0.0122 0.1773 TNF,HLA-DRB5,HLA-A,HLA-B,HLA-E,HLA-DQA2,HLA-G,KIR3DL2 http://www.broadinstitute.org/gsea/msigdb/cards/KEGG_GRAFT_VERSUS_HOST_DISEASE BIOCARTA_INTEGRIN_PATHWAY 38 8 1.25 0.0143 0.1972 VCL,SOS1,RHOA,SHC1,MAP2K1,RAF1,ACTN3,FYN http://www.broadinstitute.org/gsea/msigdb/cards/BIOCARTA_INTEGRIN_PATHWAY BIOCARTA_NGF_PATHWAY 18 5 1.65 0.0157 0.1994 MAP2K1,RAF1,FOS,SOS1,SHC1 http://www.broadinstitute.org/gsea/msigdb/cards/BIOCARTA_NGF_PATHWAY KEGG_PHENYLALANINE_METABOLISM 18 5 1.65 0.0157 0.1994 MAOB,ALDH3B1,AMH,GOT1,PRDX6 http://www.broadinstitute.org/gsea/msigdb/cards/KEGG_PHENYLALANINE_METABOLISM BIOCARTA_EPO_PATHWAY 19 5 1.58 0.0199 0.2417 MAP2K1,RAF1,FOS,SOS1,SHC1 http://www.broadinstitute.org/gsea/msigdb/cards/BIOCARTA_EPO_PATHWAY KEGG_FATTY_ACID_METABOLISM 42 8 1.14 0.0222 0.2482 EHHADH,ADH5,ADH6,ACAT1,ACSL3,CPT1B,ACAA2,ACADS http://www.broadinstitute.org/gsea/msigdb/cards/KEGG_FATTY_ACID_METABOLISM KEGG_GLUTATHIONE_METABOLISM 50 9 1.06 0.0229 0.2482 GSTM1,GSTM2,GSTM4,GPX5,RRM1,GSTA4,GGT5,GGT7,MGST1 http://www.broadinstitute.org/gsea/msigdb/cards/KEGG_GLUTATHIONE_METABOLISM KEGG_TYPE_I_DIABETES_MELLITUS 44 8 1.14 0.0222 0.2482 TNF,HLA-DRB5,HLA-A,HLA-B,HLA-E,HLA-DQA2,HLA-G,HSPD1 http://www.broadinstitute.org/gsea/msigdb/cards/KEGG_TYPE_I_DIABETES_MELLITUS BIOCARTA_CCR3_PATHWAY 23 5 1.3 0.0432 0.2889 MAP2K1,LIMK1,RAF1,CCL11,RHOA http://www.broadinstitute.org/gsea/msigdb/cards/BIOCARTA_CCR3_PATHWAY BIOCARTA_ECM_PATHWAY 24 5 1.24 0.0508 0.2889 MAP2K1,RAF1,FYN,RHOA,SHC1 http://www.broadinstitute.org/gsea/msigdb/cards/BIOCARTA_ECM_PATHWAY BIOCARTA_IGF1_PATHWAY 21 5 1.43 0.0301 0.2889 MAP2K1,RAF1,FOS,SOS1,SHC1 http://www.broadinstitute.org/gsea/msigdb/cards/BIOCARTA_IGF1_PATHWAY BIOCARTA_IL2_PATHWAY 22 5 1.36 0.0363 0.2889 MAP2K1,RAF1,FOS,SOS1,SHC1 http://www.broadinstitute.org/gsea/msigdb/cards/BIOCARTA_IL2_PATHWAY BIOCARTA_IL6_PATHWAY 22 5 1.36 0.0363 0.2889 MAP2K1,RAF1,FOS,SOS1,SHC1 http://www.broadinstitute.org/gsea/msigdb/cards/BIOCARTA_IL6_PATHWAY BIOCARTA_IL2RB_PATHWAY 38 7 1.06 0.0417 0.2889 FOS,SOS1,SHC1,MYC,IKZF3,RAF1,PPIA http://www.broadinstitute.org/gsea/msigdb/cards/BIOCARTA_IL2RB_PATHWAY BIOCARTA_GLEEVEC_PATHWAY 23 5 1.3 0.0432 0.2889 MAP2K1,RAF1,FOS,SOS1,MYC http://www.broadinstitute.org/gsea/msigdb/cards/BIOCARTA_GLEEVEC_PATHWAY BIOCARTA_INSULIN_PATHWAY 22 5 1.36 0.0363 0.2889 MAP2K1,RAF1,FOS,SOS1,SHC1 http://www.broadinstitute.org/gsea/msigdb/cards/BIOCARTA_INSULIN_PATHWAY BIOCARTA_MAPK_PATHWAY 87 13 0.76 0.0355 0.2889 DAXX,FOS,SHC1,MYC,MAP2K7,MAPKAPK5,MKNK1,MAPKAPK2,MAP2K1,RAF1,MAPK11,RPS6KA1,RPS6KA2 http://www.broadinstitute.org/gsea/msigdb/cards/BIOCARTA_MAPK_PATHWAY BIOCARTA_MTOR_PATHWAY 23 5 1.3 0.0432 0.2889 MKNK1,FKBP1A,EIF4G2,EIF4G3,EIF4A1 http://www.broadinstitute.org/gsea/msigdb/cards/BIOCARTA_MTOR_PATHWAY BIOCARTA_P38MAPK_PATHWAY 40 7 0.99 0.0531 0.2889 MAPKAPK5,MKNK1,MAPKAPK2,DAXX,SHC1,MYC,DDIT3 http://www.broadinstitute.org/gsea/msigdb/cards/BIOCARTA_P38MAPK_PATHWAY BIOCARTA_PDGF_PATHWAY 32 6 1.09 0.0532 0.2889 PDGFA,FOS,SOS1,SHC1,MAP2K1,RAF1 http://www.broadinstitute.org/gsea/msigdb/cards/BIOCARTA_PDGF_PATHWAY BIOCARTA_EIF4_PATHWAY 24 5 1.24 0.0508 0.2889 MKNK1,EIF4G2,EIF4G3,EIF4A1,PABPC1 http://www.broadinstitute.org/gsea/msigdb/cards/BIOCARTA_EIF4_PATHWAY BIOCARTA_RHO_PATHWAY 32 6 1.09 0.0532 0.2889 PIP5K1A,VCL,ARHGAP6,RHOA,LIMK1,ARPC1B http://www.broadinstitute.org/gsea/msigdb/cards/BIOCARTA_RHO_PATHWAY BIOCARTA_HER2_PATHWAY 22 5 1.36 0.0363 0.2889 MAP2K1,NCOA2,RAF1,SOS1,SHC1 http://www.broadinstitute.org/gsea/msigdb/cards/BIOCARTA_HER2_PATHWAY BIOCARTA_TPO_PATHWAY 24 5 1.24 0.0508 0.2889 MAP2K1,RAF1,FOS,SOS1,SHC1 http://www.broadinstitute.org/gsea/msigdb/cards/BIOCARTA_TPO_PATHWAY KEGG_STEROID_BIOSYNTHESIS 17 4 1.5 0.0435 0.2889 CYP51A1,SC4MOL,FDFT1,CYP27B1 http://www.broadinstitute.org/gsea/msigdb/cards/KEGG_STEROID_BIOSYNTHESIS KEGG_SPLICEOSOME 126 16 0.68 0.036 0.2889 SMNDC1,SFRS5,LSM5,U2AF1,ACIN1,EFTUD2,SNRPE,RBMX,CDC5L,SF3B4,SF3B3,PRPF8,DHX16,HSPA8,RBM22,TXNL4A http://www.broadinstitute.org/gsea/msigdb/cards/KEGG_SPLICEOSOME KEGG_PROTEIN_EXPORT 24 5 1.3 0.0432 0.2889 SRP68,SEC62,IMMP1L,SRP72,HSPA5 http://www.broadinstitute.org/gsea/msigdb/cards/KEGG_PROTEIN_EXPORT KEGG_MAPK_SIGNALING_PATHWAY 267 31 0.41 0.0513 0.2889 MAP2K7,PLA2G2E,MAP2K1,FGF5,DAXX,MYC,CACNG8,CACNG5,MKNK1,SOS1,MAPK11,RPS6KA1,RPS6KA2,DUSP8,DUSP7,PDGFA,FGF13,FGF12,CHP2,DDIT3,ARRB2,MAPKAPK5,MAPKAPK2,JUND,CACNA1A,CACNA1B,FOS,TNF,PPP3R1,HSPA8,RAF1 http://www.broadinstitute.org/gsea/msigdb/cards/KEGG_MAPK_SIGNALING_PATHWAY KEGG_CELL_CYCLE 128 17 0.64 0.038 0.2889 DBF4,TTK,RAD21,RBL2,MAD2L2,CHEK1,CREBBP,CDC20,CDC26,ATM,HDAC1,SMC1A,E2F2,CCNE2,MYC,CDC6,MCM2 http://www.broadinstitute.org/gsea/msigdb/cards/KEGG_CELL_CYCLE KEGG_DORSO_VENTRAL_AXIS_FORMATION 25 5 1.24 0.0508 0.2889 ETV7,SOS1,PIWIL1,MAP2K1,SPIRE1 http://www.broadinstitute.org/gsea/msigdb/cards/KEGG_DORSO_VENTRAL_AXIS_FORMATION KEGG_HEDGEHOG_SIGNALING_PATHWAY 56 9 0.86 0.0493 0.2889 WNT3A,SHH,ZIC2,WNT10B,WNT5A,BMP4,CSNK1D,WNT7A,BMP5 http://www.broadinstitute.org/gsea/msigdb/cards/KEGG_HEDGEHOG_SIGNALING_PATHWAY KEGG_TGF_BETA_SIGNALING_PATHWAY 86 13 0.79 0.03 0.2889 RHOA,MYC,PPP2R1B,RBL2,AMH,ACVR1,TNF,THBS3,BMP4,CREBBP,ID2,SMURF2,BMP5 http://www.broadinstitute.org/gsea/msigdb/cards/KEGG_TGF_BETA_SIGNALING_PATHWAY KEGG_RENIN_ANGIOTENSIN_SYSTEM 17 4 1.41 0.0531 0.2889 ACE,MAS1,CPA3,CMA1 http://www.broadinstitute.org/gsea/msigdb/cards/KEGG_RENIN_ANGIOTENSIN_SYSTEM KEGG_TYPE_II_DIABETES_MELLITUS 47 8 0.95 0.0463 0.2889 TNF,SLC2A2,HK3,SOCS2,SOCS6,PRKCE,CACNA1A,CACNA1B http://www.broadinstitute.org/gsea/msigdb/cards/KEGG_TYPE_II_DIABETES_MELLITUS KEGG_BASAL_CELL_CARCINOMA 55 9 0.89 0.0447 0.2889 WNT3A,SHH,WNT10B,WNT5A,BMP4,FZD8,FZD2,FZD5,WNT7A http://www.broadinstitute.org/gsea/msigdb/cards/KEGG_BASAL_CELL_CARCINOMA KEGG_ALLOGRAFT_REJECTION 38 7 1.18 0.0278 0.2889 TNF,HLA-DRB5,HLA-A,HLA-B,HLA-E,HLA-DQA2,HLA-G http://www.broadinstitute.org/gsea/msigdb/cards/KEGG_ALLOGRAFT_REJECTION KEGG_CELL_ADHESION_MOLECULES_CAMS 134 17 0.57 0.0554 0.2954 PTPRM,HLA-A,HLA-B,HLA-E,HLA-DQA2,HLA-G,PHOX2A,ITGAM,HLA-DRB5,NLGN4X,CLDN5,SDC2,CNTNAP1,SDC1,ICOSLG,CLDN16,CD22 http://www.broadinstitute.org/gsea/msigdb/cards/KEGG_CELL_ADHESION_MOLECULES_CAMS KEGG_TIGHT_JUNCTION 134 17 0.56 0.0588 0.308 ACTG1,ACTN3,MYH9,RAB13,MYH7B,MYL9,PPP2R2D,MYLPF,PARD6G,CLDN5,RHOA,PPP2R1B,PRKCE,CLDN16,RAB3B,EXOC4,TJP1 http://www.broadinstitute.org/gsea/msigdb/cards/KEGG_TIGHT_JUNCTION BIOCARTA_CARDIACEGF_PATHWAY 18 4 1.33 0.0637 0.3229 FOS,RHOA,ADAM12,MYC http://www.broadinstitute.org/gsea/msigdb/cards/BIOCARTA_CARDIACEGF_PATHWAY BIOCARTA_SPRY_PATHWAY 18 4 1.33 0.0637 0.3229 MAP2K1,RAF1,SOS1,SHC1 http://www.broadinstitute.org/gsea/msigdb/cards/BIOCARTA_SPRY_PATHWAY BIOCARTA_CARM_ER_PATHWAY 35 6 1 0.0683 0.3254 NCOA2,PELP1,CREBBP,HDAC5,HDAC1,MED1 http://www.broadinstitute.org/gsea/msigdb/cards/BIOCARTA_CARM_ER_PATHWAY KEGG_TYROSINE_METABOLISM 42 7 0.92 0.0662 0.3254 ADH5,ADH6,AMH,GOT1,MAOB,DBH,ALDH3B1 http://www.broadinstitute.org/gsea/msigdb/cards/KEGG_TYROSINE_METABOLISM KEGG_SELENOAMINO_ACID_METABOLISM 26 5 1.12 0.0683 0.3254 SCLY,MARS,GGT5,GGT7,CBS http://www.broadinstitute.org/gsea/msigdb/cards/KEGG_SELENOAMINO_ACID_METABOLISM KEGG_REGULATION_OF_ACTIN_CYTOSKELETON 215 25 0.42 0.0685 0.3254 ACTG1,MYH9,ITGA2B,ITGA10,MAP2K1,FGF5,SOS1,PDGFA,FGF13,FGF12,VCL,ACTN3,ARPC1B,ITGAM,MYL9,ITGAX,MYLPF,MYH7B,PIP5K1A,RHOA,LIMK1,SCIN,WASL,RAF1,F2R http://www.broadinstitute.org/gsea/msigdb/cards/KEGG_REGULATION_OF_ACTIN_CYTOSKELETON BIOCARTA_MAL_PATHWAY 19 4 1.25 0.0754 0.3527 MAP2K1,LIMK1,RAF1,RHOA http://www.broadinstitute.org/gsea/msigdb/cards/BIOCARTA_MAL_PATHWAY KEGG_PRION_DISEASES 35 6 0.96 0.0767 0.3534 STIP1,HSPA5,MAP2K1,C1QA,PHOX2A,FYN http://www.broadinstitute.org/gsea/msigdb/cards/KEGG_PRION_DISEASES KEGG_GLYCOLYSIS_GLUCONEOGENESIS 62 9 0.72 0.0838 0.3744 PGAM1,ALDH3B1,G6PC,ADH5,ADH6,G6PC2,HK3,DLAT,PGK2 http://www.broadinstitute.org/gsea/msigdb/cards/KEGG_GLYCOLYSIS_GLUCONEOGENESIS KEGG_RETINOL_METABOLISM 64 9 0.72 0.0838 0.3744 CYP3A43,RDH8,CYP1A2,UGT2B17,CYP2B6,ADH5,ADH6,ALDH1A2,RETSAT http://www.broadinstitute.org/gsea/msigdb/cards/KEGG_RETINOL_METABOLISM BIOCARTA_GH_PATHWAY 28 5 1.02 0.0887 0.3797 SOS1,SHC1,MAP2K1,RAF1,RPS6KA1 http://www.broadinstitute.org/gsea/msigdb/cards/BIOCARTA_GH_PATHWAY BIOCARTA_NKCELLS_PATHWAY 20 4 1.18 0.0881 0.3797 KLRC2,MAP2K1,HLA-A,B2M http://www.broadinstitute.org/gsea/msigdb/cards/BIOCARTA_NKCELLS_PATHWAY KEGG_ASTHMA 30 5 1.02 0.0887 0.3797 TNF,HLA-DRB5,IL3,HLA-DQA2,CCL11 http://www.broadinstitute.org/gsea/msigdb/cards/KEGG_ASTHMA KEGG_PATHOGENIC_ESCHERICHIA_COLI_INFECTION 59 8 0.75 0.0907 0.3829 TUBB2A,ACTG1,RHOA,ARHGEF2,ARPC1B,WASL,FYN,TUBAL3 http://www.broadinstitute.org/gsea/msigdb/cards/KEGG_PATHOGENIC_ESCHERICHIA_COLI_INFECTION KEGG_LYSOSOME 121 15 0.5 0.0932 0.3879 NPC1,PPT2,CTSL1,CD68,AP1S1,TPP1,ATP6V0D1,CTSH,CLN5,MFSD8,TCIRG1,AP4S1,MANBA,SMPD1,ARSA http://www.broadinstitute.org/gsea/msigdb/cards/KEGG_LYSOSOME KEGG_MELANOGENESIS 102 13 0.54 0.0945 0.3881 WNT3A,CREB3L1,WNT10B,WNT5A,MAP2K1,CREBBP,FZD8,GNAO1,CREB3,RAF1,FZD2,FZD5,WNT7A http://www.broadinstitute.org/gsea/msigdb/cards/KEGG_MELANOGENESIS KEGG_ADHERENS_JUNCTION 75 10 0.63 0.0962 0.39 LMO7,VCL,ACTG1,RHOA,PTPRM,ACTN3,WASL,CREBBP,TJP1,FYN http://www.broadinstitute.org/gsea/msigdb/cards/KEGG_ADHERENS_JUNCTION BIOCARTA_KERATINOCYTE_PATHWAY 46 7 0.79 0.098 0.3916 TNF,DAXX,FOS,MAP2K7,MAP2K1,RAF1,PRKCE http://www.broadinstitute.org/gsea/msigdb/cards/BIOCARTA_KERATINOCYTE_PATHWAY KEGG_RNA_POLYMERASE 29 5 0.97 0.0999 0.3916 POLR2G,POLR2I,POLR1D,POLR3GL,POLR3A http://www.broadinstitute.org/gsea/msigdb/cards/KEGG_RNA_POLYMERASE KEGG_HYPERTROPHIC_CARDIOMYOPATHY_HCM 85 11 0.59 0.1005 0.3916 ACTG1,CACNG8,CACNG5,SGCA,ITGA2B,TNF,ITGA10,ACE,EMD,LMNA,TNNI3 http://www.broadinstitute.org/gsea/msigdb/cards/KEGG_HYPERTROPHIC_CARDIOMYOPATHY_HCM KEGG_OOCYTE_MEIOSIS 114 14 0.5 0.1022 0.3918 PPP2R5B,CHP2,PPP2R5E,MAD2L2,MAP2K1,CDC20,CDC26,SMC1A,CCNE2,FYN,PPP2R1B,PPP3R1,RPS6KA1,RPS6KA2 http://www.broadinstitute.org/gsea/msigdb/cards/KEGG_OOCYTE_MEIOSIS KEGG_ARRHYTHMOGENIC_RIGHT_VENTRICULAR_CARDIOMYOPATHY_ARVC 76 10 0.61 0.1031 0.3918 ACTG1,CACNG8,CACNG5,ACTN3,SGCA,ITGA2B,ITGA10,EMD,LMNA,DSG2 http://www.broadinstitute.org/gsea/msigdb/cards/KEGG_ARRHYTHMOGENIC_RIGHT_VENTRICULAR_CARDIOMYOPATHY_ARVC BIOCARTA_FCER1_PATHWAY 39 6 0.84 0.1052 0.3948 FOS,SOS1,SHC1,MAP2K7,MAP2K1,RAF1 http://www.broadinstitute.org/gsea/msigdb/cards/BIOCARTA_FCER1_PATHWAY BIOCARTA_CERAMIDE_PATHWAY 22 4 1.04 0.1163 0.4311 MAP2K1,RAF1,SMPD1,NSMAF http://www.broadinstitute.org/gsea/msigdb/cards/BIOCARTA_CERAMIDE_PATHWAY BIOCARTA_EGF_PATHWAY 31 5 0.87 0.1244 0.4379 FOS,SOS1,SHC1,MAP2K1,RAF1 http://www.broadinstitute.org/gsea/msigdb/cards/BIOCARTA_EGF_PATHWAY BIOCARTA_PITX2_PATHWAY 15 3 1.18 0.134 0.4379 CREBBP,HDAC1,MED1 http://www.broadinstitute.org/gsea/msigdb/cards/BIOCARTA_PITX2_PATHWAY BIOCARTA_AKAPCENTROSOME_PATHWAY 15 3 1.18 0.134 0.4379 PRKCE,PRKAR2B,RHOA http://www.broadinstitute.org/gsea/msigdb/cards/BIOCARTA_AKAPCENTROSOME_PATHWAY BIOCARTA_RAS_PATHWAY 23 4 0.98 0.1317 0.4379 MAP2K1,RAF1,RHOA,RALA http://www.broadinstitute.org/gsea/msigdb/cards/BIOCARTA_RAS_PATHWAY BIOCARTA_HSP27_PATHWAY 15 3 1.18 0.134 0.4379 TNF,MAPKAPK2,DAXX http://www.broadinstitute.org/gsea/msigdb/cards/BIOCARTA_HSP27_PATHWAY KEGG_PYRIMIDINE_METABOLISM 98 12 0.49 0.1305 0.4379 DTYMK,NME7,TK1,UPRT,POLR1D,RRM1,POLR2G,POLR2I,DCTD,POLR3A,POLR3GL,ITPA http://www.broadinstitute.org/gsea/msigdb/cards/KEGG_PYRIMIDINE_METABOLISM KEGG_RIBOSOME 87 11 0.54 0.1211 0.4379 RPL36AL,RPLP2,RPL22L1,RPS3,RPS18,RPL41,RPS15,RPS26,RPL31,RPL4,RPL29 http://www.broadinstitute.org/gsea/msigdb/cards/KEGG_RIBOSOME KEGG_NEUROACTIVE_LIGAND_RECEPTOR_INTERACTION 272 29 0.28 0.1302 0.4379 ADORA3,LPAR3,GRIN3B,S1PR2,SSTR3,SSTR1,AVPR1B,AVPR1A,CHRNB2,CHRNB1,GHSR,HTR5A,NPFFR2,MAS1,F2RL2,GRIK4,NTSR1,ADRA2C,ADRA2B,GABRA1,GABRA5,P2RX6,MTNR1B,MTNR1A,CALCRL,GABRG2,FSHB,PRSS1,F2R http://www.broadinstitute.org/gsea/msigdb/cards/KEGG_NEUROACTIVE_LIGAND_RECEPTOR_INTERACTION KEGG_FC_EPSILON_RI_SIGNALING_PATHWAY 79 10 0.54 0.1335 0.4379 MAP2K7,PRKCE,PLA2G2E,TNF,SOS1,IL3,MAP2K1,RAF1,MAPK11,FYN http://www.broadinstitute.org/gsea/msigdb/cards/KEGG_FC_EPSILON_RI_SIGNALING_PATHWAY KEGG_PROXIMAL_TUBULE_BICARBONATE_RECLAMATION 23 4 0.98 0.1317 0.4379 FXYD2,ATP1B4,ATP1A3,MDH1 http://www.broadinstitute.org/gsea/msigdb/cards/KEGG_PROXIMAL_TUBULE_BICARBONATE_RECLAMATION KEGG_AUTOIMMUNE_THYROID_DISEASE 53 7 0.69 0.1264 0.4379 HLA-A,HLA-B,HLA-E,HLA-DQA2,HLA-G,IFNA5,HLA-DRB5 http://www.broadinstitute.org/gsea/msigdb/cards/KEGG_AUTOIMMUNE_THYROID_DISEASE BIOCARTA_CHREBP2_PATHWAY 44 6 0.69 0.1504 0.4812 PPP2R5B,PRKAR2B,PPP2R2D,PPP2R1B,MLX,PPP2R5E http://www.broadinstitute.org/gsea/msigdb/cards/BIOCARTA_CHREBP2_PATHWAY KEGG_BLADDER_CANCER 42 6 0.69 0.1504 0.4812 E2F2,MMP9,MYC,MAP2K1,RAF1,DAPK3 http://www.broadinstitute.org/gsea/msigdb/cards/KEGG_BLADDER_CANCER BIOCARTA_BCELLSURVIVAL_PATHWAY 16 3 1.09 0.1549 0.4853 FOS,CASP7,JUND http://www.broadinstitute.org/gsea/msigdb/cards/BIOCARTA_BCELLSURVIVAL_PATHWAY BIOCARTA_CDC42RAC_PATHWAY 16 3 1.09 0.1549 0.4853 ARPC1B,RHOA,WASL http://www.broadinstitute.org/gsea/msigdb/cards/BIOCARTA_CDC42RAC_PATHWAY KEGG_ARGININE_AND_PROLINE_METABOLISM 54 7 0.61 0.1584 0.4913 GOT1,ABP1,PYCR1,ADSL,ARG2,MAOB,CKMT1A http://www.broadinstitute.org/gsea/msigdb/cards/KEGG_ARGININE_AND_PROLINE_METABOLISM KEGG_NOD_LIKE_RECEPTOR_SIGNALING_PATHWAY 62 8 0.55 0.1634 0.5016 CARD18,RIPK2,TNF,PYCARD,CARD8,MAPK11,CCL11,CCL13 http://www.broadinstitute.org/gsea/msigdb/cards/KEGG_NOD_LIKE_RECEPTOR_SIGNALING_PATHWAY BIOCARTA_BCR_PATHWAY 35 5 0.74 0.1657 0.5035 FOS,SOS1,SHC1,MAP2K1,RAF1 http://www.broadinstitute.org/gsea/msigdb/cards/BIOCARTA_BCR_PATHWAY BIOCARTA_NFAT_PATHWAY 54 7 0.58 0.1698 0.5061 PRKAR2B,FKBP1A,CALR,NKX2-5,MAP2K1,CREBBP,RAF1 http://www.broadinstitute.org/gsea/msigdb/cards/BIOCARTA_NFAT_PATHWAY KEGG_AMYOTROPHIC_LATERAL_SCLEROSIS_ALS 53 7 0.58 0.1698 0.5061 ALS2,DAXX,CAT,CHP2,TNF,PPP3R1,MAPK11 http://www.broadinstitute.org/gsea/msigdb/cards/KEGG_AMYOTROPHIC_LATERAL_SCLEROSIS_ALS KEGG_UBIQUITIN_MEDIATED_PROTEOLYSIS 137 15 0.35 0.1732 0.5109 UBR5,UBE2D4,RHOBTB2,FBXO4,CDC20,CDC26,RNF7,NEDD4,UBA2,AIRE,SMURF2,FANCL,UBE2I,SIAH1,DET1 http://www.broadinstitute.org/gsea/msigdb/cards/KEGG_UBIQUITIN_MEDIATED_PROTEOLYSIS BIOCARTA_TCR_PATHWAY 47 6 0.63 0.1758 0.5115 FOS,SOS1,SHC1,MAP2K1,RAF1,FYN http://www.broadinstitute.org/gsea/msigdb/cards/BIOCARTA_TCR_PATHWAY BIOCARTA_ARF_PATHWAY 17 3 1 0.1767 0.5115 POLR1D,MYC,TWIST1 http://www.broadinstitute.org/gsea/msigdb/cards/BIOCARTA_ARF_PATHWAY BIOCARTA_WNT_PATHWAY 26 4 0.8 0.1823 0.513 MYC,CREBBP,CSNK1D,HDAC1 http://www.broadinstitute.org/gsea/msigdb/cards/BIOCARTA_WNT_PATHWAY KEGG_VIBRIO_CHOLERAE_INFECTION 56 7 0.55 0.1816 0.513 ACTG1,ATP6V0D1,ATP6V1A,ATP6V1B1,TCIRG1,TJP1,ATP6V0E2 http://www.broadinstitute.org/gsea/msigdb/cards/KEGG_VIBRIO_CHOLERAE_INFECTION KEGG_PRIMARY_IMMUNODEFICIENCY 35 5 0.69 0.1805 0.513 RAG1,RFXAP,TAP2,TAP1,AIRE http://www.broadinstitute.org/gsea/msigdb/cards/KEGG_PRIMARY_IMMUNODEFICIENCY KEGG_ECM_RECEPTOR_INTERACTION 84 10 0.43 0.1868 0.5209 SDC2,CD44,SDC1,ITGA2B,IBSP,ITGA10,TNN,THBS3,COL4A1,HSPG2 http://www.broadinstitute.org/gsea/msigdb/cards/KEGG_ECM_RECEPTOR_INTERACTION BIOCARTA_ETS_PATHWAY 18 3 0.92 0.1993 0.5395 RBL2,HDAC5,FOS http://www.broadinstitute.org/gsea/msigdb/cards/BIOCARTA_ETS_PATHWAY BIOCARTA_PTEN_PATHWAY 18 3 0.92 0.1993 0.5395 SOS1,ILK,SHC1 http://www.broadinstitute.org/gsea/msigdb/cards/BIOCARTA_PTEN_PATHWAY KEGG_ENDOCYTOSIS 183 19 0.27 0.1974 0.5395 HLA-A,HLA-B,HLA-E,HLA-G,ARRB2,ACAP3,ADRBK1,ARF6,IQSEC3,NEDD4,GRK7,SMURF2,PARD6G,LDLR,IL8RA,PIP5K1A,EPN1,HSPA8,F2R http://www.broadinstitute.org/gsea/msigdb/cards/KEGG_ENDOCYTOSIS KEGG_LEUKOCYTE_TRANSENDOTHELIAL_MIGRATION 118 13 0.34 0.2006 0.5395 MMP9,VCL,ACTG1,RAPGEF3,ACTN3,ITGAM,MYL9,MYLPF,CLDN5,RHOA,CLDN16,MAPK11,RASSF5 http://www.broadinstitute.org/gsea/msigdb/cards/KEGG_LEUKOCYTE_TRANSENDOTHELIAL_MIGRATION KEGG_T_CELL_RECEPTOR_SIGNALING_PATHWAY 108 12 0.35 0.2119 0.5648 MAP2K7,CHP2,MAP2K1,FOS,RHOA,TNF,PPP3R1,SOS1,NFAT5,RAF1,MAPK11,FYN http://www.broadinstitute.org/gsea/msigdb/cards/KEGG_T_CELL_RECEPTOR_SIGNALING_PATHWAY BIOCARTA_PYK2_PATHWAY 29 4 0.69 0.219 0.5689 SOS1,SHC1,MAP2K1,RAF1 http://www.broadinstitute.org/gsea/msigdb/cards/BIOCARTA_PYK2_PATHWAY KEGG_LINOLEIC_ACID_METABOLISM 29 4 0.69 0.219 0.5689 CYP3A43,CYP1A2,AKR1B10,PLA2G2E http://www.broadinstitute.org/gsea/msigdb/cards/KEGG_LINOLEIC_ACID_METABOLISM KEGG_APOPTOSIS 88 10 0.38 0.2166 0.5689 PRKAR2B,CASP7,CHP2,TNFRSF10A,TNFRSF10C,TNF,PPP3R1,IL3,ATM,ENDOG http://www.broadinstitute.org/gsea/msigdb/cards/KEGG_APOPTOSIS BIOCARTA_PROTEASOME_PATHWAY 19 3 0.84 0.2225 0.5731 PSMB5,PSMA1,PSMA3 http://www.broadinstitute.org/gsea/msigdb/cards/BIOCARTA_PROTEASOME_PATHWAY KEGG_EPITHELIAL_CELL_SIGNALING_IN_HELICOBACTER_PYLORI_INFECTION 68 8 0.41 0.2311 0.5901 IL8RA,ATP6V0D1,ATP6V1A,ATP6V1B1,TCIRG1,MAPK11,TJP1,ATP6V0E2 http://www.broadinstitute.org/gsea/msigdb/cards/KEGG_EPITHELIAL_CELL_SIGNALING_IN_HELICOBACTER_PYLORI_INFECTION BIOCARTA_ATM_PATHWAY 20 3 0.77 0.2462 0.613 CHEK1,ATM,RBBP8 http://www.broadinstitute.org/gsea/msigdb/cards/BIOCARTA_ATM_PATHWAY KEGG_STARCH_AND_SUCROSE_METABOLISM 52 6 0.47 0.2457 0.613 UGT2B17,G6PC,G6PC2,HK3,GYS1,AGL http://www.broadinstitute.org/gsea/msigdb/cards/KEGG_STARCH_AND_SUCROSE_METABOLISM KEGG_PPAR_SIGNALING_PATHWAY 69 8 0.39 0.2432 0.613 EHHADH,APOA5,ILK,ME1,PLIN1,ACSL3,NR1H3,CPT1B http://www.broadinstitute.org/gsea/msigdb/cards/KEGG_PPAR_SIGNALING_PATHWAY KEGG_DILATED_CARDIOMYOPATHY 92 10 0.33 0.2481 0.613 ACTG1,CACNG8,CACNG5,SGCA,ITGA2B,TNF,ITGA10,EMD,LMNA,TNNI3 http://www.broadinstitute.org/gsea/msigdb/cards/KEGG_DILATED_CARDIOMYOPATHY BIOCARTA_FAS_PATHWAY 30 4 0.6 0.2575 0.6162 DAXX,CASP7,LMNA,RIPK2 http://www.broadinstitute.org/gsea/msigdb/cards/BIOCARTA_FAS_PATHWAY KEGG_O_GLYCAN_BIOSYNTHESIS 30 4 0.6 0.2575 0.6162 GALNTL4,GCNT1,ST6GALNAC1,GALNT9 http://www.broadinstitute.org/gsea/msigdb/cards/KEGG_O_GLYCAN_BIOSYNTHESIS KEGG_RIG_I_LIKE_RECEPTOR_SIGNALING_PATHWAY 71 8 0.37 0.2556 0.6162 ISG15,IFNE,IFIH1,TNF,RNF125,CYLD,IFNA5,MAPK11 http://www.broadinstitute.org/gsea/msigdb/cards/KEGG_RIG_I_LIKE_RECEPTOR_SIGNALING_PATHWAY KEGG_LONG_TERM_POTENTIATION 70 8 0.37 0.2556 0.6162 RAPGEF3,CHP2,PPP3R1,MAP2K1,CREBBP,RAF1,RPS6KA1,RPS6KA2 http://www.broadinstitute.org/gsea/msigdb/cards/KEGG_LONG_TERM_POTENTIATION BIOCARTA_TFF_PATHWAY 21 3 0.69 0.2703 0.6419 SOS1,RHOA,SHC1 http://www.broadinstitute.org/gsea/msigdb/cards/BIOCARTA_TFF_PATHWAY KEGG_GLYCINE_SERINE_AND_THREONINE_METABOLISM 31 4 0.55 0.2772 0.648 ABP1,MAOB,GLYCTK,CBS http://www.broadinstitute.org/gsea/msigdb/cards/KEGG_GLYCINE_SERINE_AND_THREONINE_METABOLISM KEGG_TASTE_TRANSDUCTION 52 6 0.41 0.2757 0.648 TAS2R1,SCNN1B,TAS2R40,TAS2R39,CACNA1A,CACNA1B http://www.broadinstitute.org/gsea/msigdb/cards/KEGG_TASTE_TRANSDUCTION BIOCARTA_CHEMICAL_PATHWAY 22 3 0.63 0.2946 0.664 ATM,CASP7,EIF2S1 http://www.broadinstitute.org/gsea/msigdb/cards/BIOCARTA_CHEMICAL_PATHWAY BIOCARTA_SPPA_PATHWAY 22 3 0.63 0.2946 0.664 MAP2K1,RAF1,F2R http://www.broadinstitute.org/gsea/msigdb/cards/BIOCARTA_SPPA_PATHWAY BIOCARTA_BIOPEPTIDES_PATHWAY 43 5 0.43 0.295 0.664 SOS1,SHC1,MAP2K1,RAF1,FYN http://www.broadinstitute.org/gsea/msigdb/cards/BIOCARTA_BIOPEPTIDES_PATHWAY KEGG_PROPANOATE_METABOLISM 33 4 0.5 0.2971 0.664 EHHADH,ACAT1,SUCLA2,MLYCD http://www.broadinstitute.org/gsea/msigdb/cards/KEGG_PROPANOATE_METABOLISM KEGG_INSULIN_SIGNALING_PATHWAY 137 14 0.21 0.2943 0.664 PRKAR2B,SOCS2,SOCS6,G6PC2,PPP1R3B,GYS1,MAP2K1,SHC1,FLOT2,G6PC,MKNK1,SOS1,HK3,RAF1 http://www.broadinstitute.org/gsea/msigdb/cards/KEGG_INSULIN_SIGNALING_PATHWAY KEGG_CHRONIC_MYELOID_LEUKEMIA 73 8 0.31 0.2937 0.664 E2F2,SHC1,MYC,CTBP2,SOS1,MAP2K1,RAF1,HDAC1 http://www.broadinstitute.org/gsea/msigdb/cards/KEGG_CHRONIC_MYELOID_LEUKEMIA BIOCARTA_AT1R_PATHWAY 34 4 0.46 0.3172 0.6657 SOS1,SHC1,MAP2K1,RAF1 http://www.broadinstitute.org/gsea/msigdb/cards/BIOCARTA_AT1R_PATHWAY BIOCARTA_CTL_PATHWAY 15 2 0.8 0.311 0.6657 HLA-A,B2M http://www.broadinstitute.org/gsea/msigdb/cards/BIOCARTA_CTL_PATHWAY BIOCARTA_INTRINSIC_PATHWAY 23 3 0.56 0.3191 0.6657 COL4A1,F9,F2R http://www.broadinstitute.org/gsea/msigdb/cards/BIOCARTA_INTRINSIC_PATHWAY KEGG_VALINE_LEUCINE_AND_ISOLEUCINE_DEGRADATION 44 5 0.4 0.3124 0.6657 EHHADH,ACAT1,ACAA2,ACADS,DBT http://www.broadinstitute.org/gsea/msigdb/cards/KEGG_VALINE_LEUCINE_AND_ISOLEUCINE_DEGRADATION KEGG_BUTANOATE_METABOLISM 34 4 0.46 0.3172 0.6657 EHHADH,ACAT1,ACADS,AKR1B10 http://www.broadinstitute.org/gsea/msigdb/cards/KEGG_BUTANOATE_METABOLISM KEGG_REGULATION_OF_AUTOPHAGY 35 4 0.46 0.3172 0.6657 IFNA5,GABARAP,ATG4B,ATG4A http://www.broadinstitute.org/gsea/msigdb/cards/KEGG_REGULATION_OF_AUTOPHAGY KEGG_AXON_GUIDANCE 129 13 0.21 0.3018 0.6657 PLXNA2,UNC5A,CHP2,NTN3,EPHA3,SEMA6C,EPHA8,RHOA,LIMK1,SEMA4G,PPP3R1,NFAT5,FYN http://www.broadinstitute.org/gsea/msigdb/cards/KEGG_AXON_GUIDANCE KEGG_VEGF_SIGNALING_PATHWAY 76 8 0.27 0.3198 0.6657 CHP2,PLA2G2E,PPP3R1,MAPKAPK2,NFAT5,MAP2K1,RAF1,MAPK11 http://www.broadinstitute.org/gsea/msigdb/cards/KEGG_VEGF_SIGNALING_PATHWAY KEGG_B_CELL_RECEPTOR_SIGNALING_PATHWAY 75 8 0.27 0.3198 0.6657 FOS,CHP2,PPP3R1,SOS1,NFAT5,CD22,MAP2K1,RAF1 http://www.broadinstitute.org/gsea/msigdb/cards/KEGG_B_CELL_RECEPTOR_SIGNALING_PATHWAY KEGG_PATHWAYS_IN_CANCER 328 31 0.11 0.3064 0.6657 SHH,WNT10B,ITGA2B,BMP4,MAP2K1,CREBBP,FGF5,CCNE2,MYC,CTBP2,SOS1,FZD8,FZD2,FZD5,RASSF5,WNT7A,PDGFA,MMP9,WNT3A,FGF13,FGF12,RALA,WNT5A,TRAF4,HDAC1,E2F2,FOS,RHOA,DAPK3,COL4A1,RAF1 http://www.broadinstitute.org/gsea/msigdb/cards/KEGG_PATHWAYS_IN_CANCER BIOCARTA_G2_PATHWAY 24 3 0.5 0.3435 0.6874 CHEK1,ATM,RPS6KA1 http://www.broadinstitute.org/gsea/msigdb/cards/BIOCARTA_G2_PATHWAY BIOCARTA_MPR_PATHWAY 34 4 0.41 0.3375 0.6874 PAQR5,PRKAR2B,ARPC1B,RPS6KA1 http://www.broadinstitute.org/gsea/msigdb/cards/BIOCARTA_MPR_PATHWAY BIOCARTA_NTHI_PATHWAY 24 3 0.5 0.3435 0.6874 TNF,CREBBP,MAPK11 http://www.broadinstitute.org/gsea/msigdb/cards/BIOCARTA_NTHI_PATHWAY BIOCARTA_NUCLEARRS_PATHWAY 15 2 0.69 0.3438 0.6874 CYP1A2,NR1H3 http://www.broadinstitute.org/gsea/msigdb/cards/BIOCARTA_NUCLEARRS_PATHWAY BIOCARTA_GPCR_PATHWAY 35 4 0.41 0.3375 0.6874 FOS,PRKAR2B,MAP2K1,RAF1 http://www.broadinstitute.org/gsea/msigdb/cards/BIOCARTA_GPCR_PATHWAY KEGG_BASE_EXCISION_REPAIR 35 4 0.46 0.3378 0.6874 HMGB1,MUTYH,HMGB1L1,POLB http://www.broadinstitute.org/gsea/msigdb/cards/KEGG_BASE_EXCISION_REPAIR BIOCARTA_HIVNEF_PATHWAY 56 6 0.28 0.3536 0.6969 DAXX,ACTG1,CASP7,MAP2K7,TNF,LMNA http://www.broadinstitute.org/gsea/msigdb/cards/BIOCARTA_HIVNEF_PATHWAY KEGG_ARACHIDONIC_ACID_METABOLISM 58 6 0.28 0.3536 0.6969 PTGES2,GPX5,PLA2G2E,CYP2B6,GGT5,GGT7 http://www.broadinstitute.org/gsea/msigdb/cards/KEGG_ARACHIDONIC_ACID_METABOLISM KEGG_BASAL_TRANSCRIPTION_FACTORS 36 4 0.37 0.3577 0.6969 TAF7L,TAF7,TAF11,TAF13 http://www.broadinstitute.org/gsea/msigdb/cards/KEGG_BASAL_TRANSCRIPTION_FACTORS KEGG_FOCAL_ADHESION 201 19 0.11 0.3576 0.6969 ACTG1,ILK,ITGA2B,IBSP,ITGA10,MAP2K1,SOS1,THBS3,FYN,PDGFA,VCL,ACTN3,MYL9,MYLPF,RHOA,SHC1,TNN,COL4A1,RAF1 http://www.broadinstitute.org/gsea/msigdb/cards/KEGG_FOCAL_ADHESION KEGG_PROSTATE_CANCER 89 9 0.2 0.3612 0.6992 E2F2,PDGFA,CCNE2,CREB3L1,SOS1,MAP2K1,CREB3,CREBBP,RAF1 http://www.broadinstitute.org/gsea/msigdb/cards/KEGG_PROSTATE_CANCER BIOCARTA_RARRXR_PATHWAY 15 2 0.6 0.3761 0.7012 NCOA2,NCOA3 http://www.broadinstitute.org/gsea/msigdb/cards/BIOCARTA_RARRXR_PATHWAY BIOCARTA_BARRESTIN_SRC_PATHWAY 15 2 0.6 0.3761 0.7012 MAP2K1,RAF1 http://www.broadinstitute.org/gsea/msigdb/cards/BIOCARTA_BARRESTIN_SRC_PATHWAY BIOCARTA_LONGEVITY_PATHWAY 15 2 0.6 0.3761 0.7012 SHC1,CAT http://www.broadinstitute.org/gsea/msigdb/cards/BIOCARTA_LONGEVITY_PATHWAY KEGG_TERPENOID_BACKBONE_BIOSYNTHESIS 15 2 0.6 0.3761 0.7012 ACAT1,GGPS1 http://www.broadinstitute.org/gsea/msigdb/cards/KEGG_TERPENOID_BACKBONE_BIOSYNTHESIS KEGG_P53_SIGNALING_PATHWAY 69 7 0.22 0.3718 0.7012 RPRM,CCNE2,SERPINE1,PPM1D,SIAH1,CHEK1,ATM http://www.broadinstitute.org/gsea/msigdb/cards/KEGG_P53_SIGNALING_PATHWAY KEGG_LONG_TERM_DEPRESSION 69 7 0.22 0.3718 0.7012 PPP2R1B,PLA2G2E,GNAO1,MAP2K1,RAF1,CRH,CACNA1A http://www.broadinstitute.org/gsea/msigdb/cards/KEGG_LONG_TERM_DEPRESSION BIOCARTA_ALK_PATHWAY 37 4 0.29 0.3981 0.7076 NKX2-5,BMP4,BMP5,ACVR1 http://www.broadinstitute.org/gsea/msigdb/cards/BIOCARTA_ALK_PATHWAY BIOCARTA_BAD_PATHWAY 26 3 0.39 0.3921 0.7076 PRKAR2B,IL3,RPS6KA1 http://www.broadinstitute.org/gsea/msigdb/cards/BIOCARTA_BAD_PATHWAY BIOCARTA_MET_PATHWAY 37 4 0.29 0.3981 0.7076 FOS,SOS1,MAP2K1,RAF1 http://www.broadinstitute.org/gsea/msigdb/cards/BIOCARTA_MET_PATHWAY BIOCARTA_PAR1_PATHWAY 37 4 0.29 0.3981 0.7076 RHOA,ARHGEF2,ARHGEF10,F2R http://www.broadinstitute.org/gsea/msigdb/cards/BIOCARTA_PAR1_PATHWAY KEGG_GALACTOSE_METABOLISM 26 3 0.39 0.3921 0.7076 G6PC2,HK3,G6PC http://www.broadinstitute.org/gsea/msigdb/cards/KEGG_GALACTOSE_METABOLISM KEGG_PURINE_METABOLISM 158 15 0.11 0.3896 0.7076 SLC25A16,NME7,ADSL,AK5,GUCY2D,POLR1D,RRM1,POLR2G,POLR2I,POLR3GL,POLR3A,AMPD2,APRT,ITPA,PAICS http://www.broadinstitute.org/gsea/msigdb/cards/KEGG_PURINE_METABOLISM KEGG_GLYCOSAMINOGLYCAN_BIOSYNTHESIS_HEPARAN_SULFATE 26 3 0.39 0.3921 0.7076 NDST2,EXTL2,HS3ST3A1 http://www.broadinstitute.org/gsea/msigdb/cards/KEGG_GLYCOSAMINOGLYCAN_BIOSYNTHESIS_HEPARAN_SULFATE KEGG_VASCULAR_SMOOTH_MUSCLE_CONTRACTION 115 11 0.14 0.3849 0.7076 PLA2G2E,KCNMB4,MYL9,MAP2K1,AVPR1B,AVPR1A,RHOA,CALCRL,KCNMA1,PRKCE,RAF1 http://www.broadinstitute.org/gsea/msigdb/cards/KEGG_VASCULAR_SMOOTH_MUSCLE_CONTRACTION BIOCARTA_RELA_PATHWAY 16 2 0.5 0.4077 0.7105 TNF,CREBBP http://www.broadinstitute.org/gsea/msigdb/cards/BIOCARTA_RELA_PATHWAY BIOCARTA_EDG1_PATHWAY 27 3 0.33 0.4161 0.7105 PDGFA,RHOA,SMPD1 http://www.broadinstitute.org/gsea/msigdb/cards/BIOCARTA_EDG1_PATHWAY BIOCARTA_ACH_PATHWAY 16 2 0.5 0.4077 0.7105 MUSK,CHRNB1 http://www.broadinstitute.org/gsea/msigdb/cards/BIOCARTA_ACH_PATHWAY BIOCARTA_SHH_PATHWAY 16 2 0.5 0.4077 0.7105 SHH,PRKAR2B http://www.broadinstitute.org/gsea/msigdb/cards/BIOCARTA_SHH_PATHWAY BIOCARTA_CREB_PATHWAY 27 3 0.33 0.4161 0.7105 PRKAR2B,SOS1,RPS6KA1 http://www.broadinstitute.org/gsea/msigdb/cards/BIOCARTA_CREB_PATHWAY KEGG_CARDIAC_MUSCLE_CONTRACTION 78 7 0.16 0.4154 0.7105 UQCRC2,ATP1B4,CACNG8,CACNG5,FXYD2,ATP1A3,TNNI3 http://www.broadinstitute.org/gsea/msigdb/cards/KEGG_CARDIAC_MUSCLE_CONTRACTION KEGG_MELANOMA 71 7 0.16 0.4154 0.7105 E2F2,FGF5,PDGFA,FGF13,FGF12,MAP2K1,RAF1 http://www.broadinstitute.org/gsea/msigdb/cards/KEGG_MELANOMA BIOCARTA_IL7_PATHWAY 17 2 0.41 0.4385 0.7316 CREBBP,FYN http://www.broadinstitute.org/gsea/msigdb/cards/BIOCARTA_IL7_PATHWAY BIOCARTA_CK1_PATHWAY 17 2 0.41 0.4385 0.7316 PRKAR2B,CSNK1D http://www.broadinstitute.org/gsea/msigdb/cards/BIOCARTA_CK1_PATHWAY KEGG_ONE_CARBON_POOL_BY_FOLATE 17 2 0.41 0.4385 0.7316 MTHFD2,MTHFR http://www.broadinstitute.org/gsea/msigdb/cards/KEGG_ONE_CARBON_POOL_BY_FOLATE KEGG_HOMOLOGOUS_RECOMBINATION 28 3 0.28 0.4398 0.7316 XRCC3,RPA2,ATRX http://www.broadinstitute.org/gsea/msigdb/cards/KEGG_HOMOLOGOUS_RECOMBINATION KEGG_HEMATOPOIETIC_CELL_LINEAGE 88 8 0.11 0.4405 0.7316 CD44,ITGA2B,TNF,ITGAM,CD9,CD22,HLA-DRB5,IL3 http://www.broadinstitute.org/gsea/msigdb/cards/KEGG_HEMATOPOIETIC_CELL_LINEAGE BIOCARTA_MCM_PATHWAY 18 2 0.33 0.4684 0.7377 CDC6,MCM2 http://www.broadinstitute.org/gsea/msigdb/cards/BIOCARTA_MCM_PATHWAY BIOCARTA_INFLAM_PATHWAY 29 3 0.23 0.463 0.7377 TNF,PDGFA,IL3 http://www.broadinstitute.org/gsea/msigdb/cards/BIOCARTA_INFLAM_PATHWAY BIOCARTA_ERK5_PATHWAY 18 2 0.33 0.4684 0.7377 RPS6KA1,SHC1 http://www.broadinstitute.org/gsea/msigdb/cards/BIOCARTA_ERK5_PATHWAY BIOCARTA_UCALPAIN_PATHWAY 18 2 0.33 0.4684 0.7377 ACTN3,RHOA http://www.broadinstitute.org/gsea/msigdb/cards/BIOCARTA_UCALPAIN_PATHWAY BIOCARTA_VEGF_PATHWAY 29 3 0.23 0.463 0.7377 SHC1,EIF2B4,EIF2S1 http://www.broadinstitute.org/gsea/msigdb/cards/BIOCARTA_VEGF_PATHWAY KEGG_HISTIDINE_METABOLISM 29 3 0.23 0.463 0.7377 MAOB,ALDH3B1,ABP1 http://www.broadinstitute.org/gsea/msigdb/cards/KEGG_HISTIDINE_METABOLISM KEGG_SPHINGOLIPID_METABOLISM 40 4 0.18 0.4578 0.7377 CERK,SMPD1,ARSA,SMPD4 http://www.broadinstitute.org/gsea/msigdb/cards/KEGG_SPHINGOLIPID_METABOLISM KEGG_PYRUVATE_METABOLISM 40 4 0.18 0.4578 0.7377 ME1,ACAT1,DLAT,MDH1 http://www.broadinstitute.org/gsea/msigdb/cards/KEGG_PYRUVATE_METABOLISM KEGG_FC_GAMMA_R_MEDIATED_PHAGOCYTOSIS 97 9 0.09 0.4494 0.7377 ARPC1B,ARF6,MAP2K1,PIP5K1A,LIMK1,PRKCE,SCIN,WASL,RAF1 http://www.broadinstitute.org/gsea/msigdb/cards/KEGG_FC_GAMMA_R_MEDIATED_PHAGOCYTOSIS KEGG_ALZHEIMERS_DISEASE 167 14 0.03 0.4709 0.7377 IDE,APOE,CHP2,BACE1,UQCRC2,NDUFS6,NDUFS5,CASP7,ERN1,TNF,PPP3R1,NDUFA9,NAE1,ATP5A1 http://www.broadinstitute.org/gsea/msigdb/cards/KEGG_ALZHEIMERS_DISEASE KEGG_ENDOMETRIAL_CANCER 52 5 0.12 0.4702 0.7377 ILK,MYC,SOS1,MAP2K1,RAF1 http://www.broadinstitute.org/gsea/msigdb/cards/KEGG_ENDOMETRIAL_CANCER BIOCARTA_COMP_PATHWAY 19 2 0.25 0.4973 0.7557 CFB,C1QA http://www.broadinstitute.org/gsea/msigdb/cards/BIOCARTA_COMP_PATHWAY BIOCARTA_MTA3_PATHWAY 19 2 0.25 0.4973 0.7557 MBD3,HDAC1 http://www.broadinstitute.org/gsea/msigdb/cards/BIOCARTA_MTA3_PATHWAY BIOCARTA_TGFB_PATHWAY 19 2 0.25 0.4973 0.7557 MAP2K1,CREBBP http://www.broadinstitute.org/gsea/msigdb/cards/BIOCARTA_TGFB_PATHWAY KEGG_GAP_JUNCTION 90 8 0.04 0.4937 0.7557 PDGFA,TUBB2A,SOS1,MAP2K1,RAF1,TJP1,CSNK1D,TUBAL3 http://www.broadinstitute.org/gsea/msigdb/cards/KEGG_GAP_JUNCTION KEGG_ALDOSTERONE_REGULATED_SODIUM_REABSORPTION 42 4 0.11 0.4964 0.7557 FXYD2,ATP1B4,SCNN1B,ATP1A3 http://www.broadinstitute.org/gsea/msigdb/cards/KEGG_ALDOSTERONE_REGULATED_SODIUM_REABSORPTION KEGG_GLIOMA 65 6 0.06 0.495 0.7557 E2F2,PDGFA,SHC1,SOS1,MAP2K1,RAF1 http://www.broadinstitute.org/gsea/msigdb/cards/KEGG_GLIOMA KEGG_STEROID_HORMONE_BIOSYNTHESIS 55 5 0.07 0.5041 0.7584 CYP3A43,SRD5A3,SULT1E1,UGT2B17,HSD17B3 http://www.broadinstitute.org/gsea/msigdb/cards/KEGG_STEROID_HORMONE_BIOSYNTHESIS KEGG_NON_SMALL_CELL_LUNG_CANCER 54 5 0.07 0.5041 0.7584 E2F2,SOS1,MAP2K1,RAF1,RASSF5 http://www.broadinstitute.org/gsea/msigdb/cards/KEGG_NON_SMALL_CELL_LUNG_CANCER BIOCARTA_AMI_PATHWAY 20 2 0.18 0.5252 0.7689 COL4A1,F2R http://www.broadinstitute.org/gsea/msigdb/cards/BIOCARTA_AMI_PATHWAY BIOCARTA_ACTINY_PATHWAY 20 2 0.18 0.5252 0.7689 ARPC1B,WASL http://www.broadinstitute.org/gsea/msigdb/cards/BIOCARTA_ACTINY_PATHWAY KEGG_OXIDATIVE_PHOSPHORYLATION 133 10 -0.01 0.5273 0.7689 ATP6V1B1,ATP6V0E2,UQCRC2,NDUFS6,NDUFS5,ATP6V0D1,ATP6V1A,TCIRG1,NDUFA9,ATP5A1 http://www.broadinstitute.org/gsea/msigdb/cards/KEGG_OXIDATIVE_PHOSPHORYLATION KEGG_NUCLEOTIDE_EXCISION_REPAIR 44 4 0.04 0.5338 0.7689 RAD23B,RAD23A,RPA2,RFC4 http://www.broadinstitute.org/gsea/msigdb/cards/KEGG_NUCLEOTIDE_EXCISION_REPAIR KEGG_PEROXISOME 78 7 0.02 0.5153 0.7689 EHHADH,PEX5,ABP1,CAT,ACSL3,PEX10,MLYCD http://www.broadinstitute.org/gsea/msigdb/cards/KEGG_PEROXISOME KEGG_CYTOSOLIC_DNA_SENSING_PATHWAY 56 5 0.04 0.5207 0.7689 POLR1D,IFNA5,PYCARD,POLR3A,POLR3GL http://www.broadinstitute.org/gsea/msigdb/cards/KEGG_CYTOSOLIC_DNA_SENSING_PATHWAY KEGG_NEUROTROPHIN_SIGNALING_PATHWAY 126 11 -0.02 0.5306 0.7689 MAP2K7,RIPK2,MAPKAPK2,MAP2K1,RHOA,SHC1,SOS1,RAF1,MAPK11,RPS6KA1,RPS6KA2 http://www.broadinstitute.org/gsea/msigdb/cards/KEGG_NEUROTROPHIN_SIGNALING_PATHWAY KEGG_ADIPOCYTOKINE_SIGNALING_PATHWAY 67 6 0.02 0.5252 0.7689 G6PC,TNF,G6PC2,ACSL3,CPT1B,NPY http://www.broadinstitute.org/gsea/msigdb/cards/KEGG_ADIPOCYTOKINE_SIGNALING_PATHWAY KEGG_VASOPRESSIN_REGULATED_WATER_REABSORPTION 44 4 0.04 0.5338 0.7689 DYNLL1,CREB3L1,STX4,CREB3 http://www.broadinstitute.org/gsea/msigdb/cards/KEGG_VASOPRESSIN_REGULATED_WATER_REABSORPTION BIOCARTA_CYTOKINE_PATHWAY 21 2 0.11 0.552 0.7733 IL3,TNF http://www.broadinstitute.org/gsea/msigdb/cards/BIOCARTA_CYTOKINE_PATHWAY BIOCARTA_DEATH_PATHWAY 33 3 0.04 0.5513 0.7733 CASP7,LMNA,TNFRSF10A http://www.broadinstitute.org/gsea/msigdb/cards/BIOCARTA_DEATH_PATHWAY BIOCARTA_ATRBRCA_PATHWAY 21 2 0.11 0.552 0.7733 CHEK1,ATM http://www.broadinstitute.org/gsea/msigdb/cards/BIOCARTA_ATRBRCA_PATHWAY BIOCARTA_MITOCHONDRIA_PATHWAY 21 2 0.11 0.552 0.7733 ENDOG,CASP7 http://www.broadinstitute.org/gsea/msigdb/cards/BIOCARTA_MITOCHONDRIA_PATHWAY KEGG_CHEMOKINE_SIGNALING_PATHWAY 190 16 -0.04 0.5532 0.7733 GNGT2,CCBP2,ARRB2,ADRBK1,MAP2K1,GRK7,IL8RA,CXCR5,RHOA,SHC1,WASL,SOS1,RAF1,CCL18,CCL11,CCL13 http://www.broadinstitute.org/gsea/msigdb/cards/KEGG_CHEMOKINE_SIGNALING_PATHWAY KEGG_COMPLEMENT_AND_COAGULATION_CASCADES 69 6 -0.02 0.5547 0.7733 SERPINE1,SERPINA1,F9,C1QA,CFB,F2R http://www.broadinstitute.org/gsea/msigdb/cards/KEGG_COMPLEMENT_AND_COAGULATION_CASCADES KEGG_INTESTINAL_IMMUNE_NETWORK_FOR_IGA_PRODUCTION 48 4 0.01 0.552 0.7733 CCBP2,HLA-DRB5,HLA-DQA2,ICOSLG http://www.broadinstitute.org/gsea/msigdb/cards/KEGG_INTESTINAL_IMMUNE_NETWORK_FOR_IGA_PRODUCTION BIOCARTA_CSK_PATHWAY 24 2 0.04 0.5778 0.777 CREBBP,PRKAR2B http://www.broadinstitute.org/gsea/msigdb/cards/BIOCARTA_CSK_PATHWAY BIOCARTA_DC_PATHWAY 22 2 0.04 0.5778 0.777 IL3,ITGAX http://www.broadinstitute.org/gsea/msigdb/cards/BIOCARTA_DC_PATHWAY BIOCARTA_P53HYPOXIA_PATHWAY 22 2 0.04 0.5778 0.777 ATM,CSNK1D http://www.broadinstitute.org/gsea/msigdb/cards/BIOCARTA_P53HYPOXIA_PATHWAY KEGG_FRUCTOSE_AND_MANNOSE_METABOLISM 34 3 0 0.572 0.777 HK3,PMM1,AKR1B10 http://www.broadinstitute.org/gsea/msigdb/cards/KEGG_FRUCTOSE_AND_MANNOSE_METABOLISM KEGG_CYSTEINE_AND_METHIONINE_METABOLISM 34 3 0 0.572 0.777 GOT1,DNMT3A,CBS http://www.broadinstitute.org/gsea/msigdb/cards/KEGG_CYSTEINE_AND_METHIONINE_METABOLISM KEGG_BETA_ALANINE_METABOLISM 22 2 0.04 0.5778 0.777 EHHADH,MLYCD http://www.broadinstitute.org/gsea/msigdb/cards/KEGG_BETA_ALANINE_METABOLISM KEGG_GLYCOSAMINOGLYCAN_BIOSYNTHESIS_CHONDROITIN_SULFATE 22 2 0.04 0.5778 0.777 CSGALNACT2,CHST14 http://www.broadinstitute.org/gsea/msigdb/cards/KEGG_GLYCOSAMINOGLYCAN_BIOSYNTHESIS_CHONDROITIN_SULFATE KEGG_LEISHMANIA_INFECTION 72 6 -0.04 0.5691 0.777 FOS,HLA-DQA2,TNF,ITGAM,HLA-DRB5,MAPK11 http://www.broadinstitute.org/gsea/msigdb/cards/KEGG_LEISHMANIA_INFECTION BIOCARTA_CASPASE_PATHWAY 23 2 -0.02 0.6024 0.7915 LMNA,CASP7 http://www.broadinstitute.org/gsea/msigdb/cards/BIOCARTA_CASPASE_PATHWAY BIOCARTA_PTDINS_PATHWAY 23 2 -0.02 0.6024 0.7915 ARHGEF2,PRKCE http://www.broadinstitute.org/gsea/msigdb/cards/BIOCARTA_PTDINS_PATHWAY BIOCARTA_RAC1_PATHWAY 23 2 -0.02 0.6024 0.7915 LIMK1,TRIO http://www.broadinstitute.org/gsea/msigdb/cards/BIOCARTA_RAC1_PATHWAY BIOCARTA_PGC1A_PATHWAY 24 2 -0.02 0.6024 0.7915 ESRRA,HDAC5 http://www.broadinstitute.org/gsea/msigdb/cards/BIOCARTA_PGC1A_PATHWAY KEGG_DRUG_METABOLISM_OTHER_ENZYMES 51 4 -0.08 0.6042 0.7915 CYP3A43,UGT2B17,TK1,ITPA http://www.broadinstitute.org/gsea/msigdb/cards/KEGG_DRUG_METABOLISM_OTHER_ENZYMES KEGG_MISMATCH_REPAIR 23 2 -0.02 0.6024 0.7915 RPA2,RFC4 http://www.broadinstitute.org/gsea/msigdb/cards/KEGG_MISMATCH_REPAIR KEGG_PROGESTERONE_MEDIATED_OOCYTE_MATURATION 86 7 -0.1 0.6084 0.7936 MAD2L2,MAP2K1,RAF1,MAPK11,CDC26,RPS6KA1,RPS6KA2 http://www.broadinstitute.org/gsea/msigdb/cards/KEGG_PROGESTERONE_MEDIATED_OOCYTE_MATURATION KEGG_DNA_REPLICATION 36 3 -0.08 0.6116 0.7944 RPA2,MCM2,RFC4 http://www.broadinstitute.org/gsea/msigdb/cards/KEGG_DNA_REPLICATION BIOCARTA_CXCR4_PATHWAY 24 2 -0.08 0.6259 0.8095 MAP2K1,RAF1 http://www.broadinstitute.org/gsea/msigdb/cards/BIOCARTA_CXCR4_PATHWAY KEGG_COLORECTAL_CANCER 62 5 -0.13 0.6294 0.8105 FOS,RHOA,MYC,MAP2K1,RAF1 http://www.broadinstitute.org/gsea/msigdb/cards/KEGG_COLORECTAL_CANCER KEGG_GLYCOSPHINGOLIPID_BIOSYNTHESIS_LACTO_AND_NEOLACTO_SERIES 26 2 -0.14 0.6484 0.8248 FUT5,B3GNT4 http://www.broadinstitute.org/gsea/msigdb/cards/KEGG_GLYCOSPHINGOLIPID_BIOSYNTHESIS_LACTO_AND_NEOLACTO_SERIES KEGG_SNARE_INTERACTIONS_IN_VESICULAR_TRANSPORT 38 3 -0.16 0.6486 0.8248 STX4,VAMP4,GOSR2 http://www.broadinstitute.org/gsea/msigdb/cards/KEGG_SNARE_INTERACTIONS_IN_VESICULAR_TRANSPORT KEGG_MATURITY_ONSET_DIABETES_OF_THE_YOUNG 25 2 -0.14 0.6484 0.8248 SLC2A2,NEUROD1 http://www.broadinstitute.org/gsea/msigdb/cards/KEGG_MATURITY_ONSET_DIABETES_OF_THE_YOUNG KEGG_SYSTEMIC_LUPUS_ERYTHEMATOSUS 140 10 -0.15 0.6562 0.831 HIST1H2BN,HIST1H2BJ,ACTN3,HLA-DQA2,C1QA,HLA-DRB5,HIST1H3B,H3F3B,HIST1H3F,TNF http://www.broadinstitute.org/gsea/msigdb/cards/KEGG_SYSTEMIC_LUPUS_ERYTHEMATOSUS BIOCARTA_RACCYCD_PATHWAY 26 2 -0.2 0.6697 0.8342 RHOA,RAF1 http://www.broadinstitute.org/gsea/msigdb/cards/BIOCARTA_RACCYCD_PATHWAY BIOCARTA_VIP_PATHWAY 27 2 -0.2 0.6697 0.8342 PRKAR2B,MYC http://www.broadinstitute.org/gsea/msigdb/cards/BIOCARTA_VIP_PATHWAY KEGG_AMINOACYL_TRNA_BIOSYNTHESIS 41 3 -0.2 0.6662 0.8342 EPRS,MARS,RARS2 http://www.broadinstitute.org/gsea/msigdb/cards/KEGG_AMINOACYL_TRNA_BIOSYNTHESIS KEGG_CALCIUM_SIGNALING_PATHWAY 178 14 -0.15 0.6654 0.8342 GNA14,ITPKB,ATP2B1,CHP2,NTSR1,P2RX6,AVPR1B,AVPR1A,CACNA1A,CACNA1B,HTR5A,PPP3R1,SLC8A2,F2R http://www.broadinstitute.org/gsea/msigdb/cards/KEGG_CALCIUM_SIGNALING_PATHWAY KEGG_PORPHYRIN_AND_CHLOROPHYLL_METABOLISM 41 3 -0.23 0.6831 0.8474 CPOX,EPRS,UGT2B17 http://www.broadinstitute.org/gsea/msigdb/cards/KEGG_PORPHYRIN_AND_CHLOROPHYLL_METABOLISM KEGG_INOSITOL_PHOSPHATE_METABOLISM 54 4 -0.25 0.6966 0.8607 ITPKB,PIP5K1A,ISYNA1,PMPCA http://www.broadinstitute.org/gsea/msigdb/cards/KEGG_INOSITOL_PHOSPHATE_METABOLISM BIOCARTA_G1_PATHWAY 28 2 -0.31 0.7092 0.8727 ATM,HDAC1 http://www.broadinstitute.org/gsea/msigdb/cards/BIOCARTA_G1_PATHWAY BIOCARTA_LAIR_PATHWAY 17 1 -0.59 0.7847 0.8768 TNF http://www.broadinstitute.org/gsea/msigdb/cards/BIOCARTA_LAIR_PATHWAY BIOCARTA_ERYTH_PATHWAY 15 1 -0.4 0.742 0.8768 IL3 http://www.broadinstitute.org/gsea/msigdb/cards/BIOCARTA_ERYTH_PATHWAY BIOCARTA_GATA3_PATHWAY 16 1 -0.5 0.7643 0.8768 PRKAR2B http://www.broadinstitute.org/gsea/msigdb/cards/BIOCARTA_GATA3_PATHWAY BIOCARTA_HCMV_PATHWAY 17 1 -0.59 0.7847 0.8768 MAP2K1 http://www.broadinstitute.org/gsea/msigdb/cards/BIOCARTA_HCMV_PATHWAY BIOCARTA_IL17_PATHWAY 17 1 -0.4 0.742 0.8768 IL3 http://www.broadinstitute.org/gsea/msigdb/cards/BIOCARTA_IL17_PATHWAY BIOCARTA_IL10_PATHWAY 17 1 -0.59 0.7847 0.8768 TNF http://www.broadinstitute.org/gsea/msigdb/cards/BIOCARTA_IL10_PATHWAY BIOCARTA_P53_PATHWAY 16 1 -0.5 0.7643 0.8768 ATM http://www.broadinstitute.org/gsea/msigdb/cards/BIOCARTA_P53_PATHWAY BIOCARTA_CCR5_PATHWAY 18 1 -0.59 0.7847 0.8768 FOS http://www.broadinstitute.org/gsea/msigdb/cards/BIOCARTA_CCR5_PATHWAY BIOCARTA_MYOSIN_PATHWAY 31 2 -0.45 0.7611 0.8768 ARHGEF2,ARHGEF10 http://www.broadinstitute.org/gsea/msigdb/cards/BIOCARTA_MYOSIN_PATHWAY BIOCARTA_STEM_PATHWAY 15 1 -0.4 0.742 0.8768 IL3 http://www.broadinstitute.org/gsea/msigdb/cards/BIOCARTA_STEM_PATHWAY BIOCARTA_TNFR1_PATHWAY 29 2 -0.36 0.7275 0.8768 TNF,LMNA http://www.broadinstitute.org/gsea/msigdb/cards/BIOCARTA_TNFR1_PATHWAY KEGG_ALANINE_ASPARTATE_AND_GLUTAMATE_METABOLISM 32 2 -0.45 0.7611 0.8768 ADSL,GOT1 http://www.broadinstitute.org/gsea/msigdb/cards/KEGG_ALANINE_ASPARTATE_AND_GLUTAMATE_METABOLISM KEGG_N_GLYCAN_BIOSYNTHESIS 46 3 -0.44 0.7711 0.8768 ALG2,MAN1C1,MAN2A1 http://www.broadinstitute.org/gsea/msigdb/cards/KEGG_N_GLYCAN_BIOSYNTHESIS KEGG_OTHER_GLYCAN_DEGRADATION 16 1 -0.5 0.7643 0.8768 MANBA http://www.broadinstitute.org/gsea/msigdb/cards/KEGG_OTHER_GLYCAN_DEGRADATION KEGG_GLYCEROPHOSPHOLIPID_METABOLISM 76 5 -0.39 0.7766 0.8768 PLA2G2E,MUC1,ETNK1,PCYT1A,PCYT1B http://www.broadinstitute.org/gsea/msigdb/cards/KEGG_GLYCEROPHOSPHOLIPID_METABOLISM KEGG_GLYCOSPHINGOLIPID_BIOSYNTHESIS_GANGLIO_SERIES 15 1 -0.4 0.742 0.8768 B3GALT4 http://www.broadinstitute.org/gsea/msigdb/cards/KEGG_GLYCOSPHINGOLIPID_BIOSYNTHESIS_GANGLIO_SERIES KEGG_ABC_TRANSPORTERS 44 3 -0.37 0.7443 0.8768 ABCA7,TAP2,TAP1 http://www.broadinstitute.org/gsea/msigdb/cards/KEGG_ABC_TRANSPORTERS KEGG_PROTEASOME 48 3 -0.37 0.7443 0.8768 PSMB5,PSMA1,PSMA3 http://www.broadinstitute.org/gsea/msigdb/cards/KEGG_PROTEASOME KEGG_ERBB_SIGNALING_PATHWAY 87 6 -0.36 0.7727 0.8768 SHC1,MAP2K7,MYC,SOS1,MAP2K1,RAF1 http://www.broadinstitute.org/gsea/msigdb/cards/KEGG_ERBB_SIGNALING_PATHWAY KEGG_NOTCH_SIGNALING_PATHWAY 47 3 -0.47 0.7837 0.8768 CTBP2,CREBBP,HDAC1 http://www.broadinstitute.org/gsea/msigdb/cards/KEGG_NOTCH_SIGNALING_PATHWAY KEGG_TOLL_LIKE_RECEPTOR_SIGNALING_PATHWAY 102 7 -0.35 0.7794 0.8768 MAP2K7,IFNA5,MAP2K1,FOS,EHHADH,TNF,MAPK11 http://www.broadinstitute.org/gsea/msigdb/cards/KEGG_TOLL_LIKE_RECEPTOR_SIGNALING_PATHWAY KEGG_GNRH_SIGNALING_PATHWAY 101 7 -0.33 0.7706 0.8768 MAP2K7,PLA2G2E,MAP2K1,FSHB,SOS1,RAF1,MAPK11 http://www.broadinstitute.org/gsea/msigdb/cards/KEGG_GNRH_SIGNALING_PATHWAY KEGG_THYROID_CANCER 29 2 -0.36 0.7275 0.8768 MYC,MAP2K1 http://www.broadinstitute.org/gsea/msigdb/cards/KEGG_THYROID_CANCER KEGG_ACUTE_MYELOID_LEUKEMIA 60 4 -0.33 0.7366 0.8768 MYC,SOS1,MAP2K1,RAF1 http://www.broadinstitute.org/gsea/msigdb/cards/KEGG_ACUTE_MYELOID_LEUKEMIA KEGG_SMALL_CELL_LUNG_CANCER 84 6 -0.31 0.7429 0.8768 E2F2,CCNE2,MYC,ITGA2B,TRAF4,COL4A1 http://www.broadinstitute.org/gsea/msigdb/cards/KEGG_SMALL_CELL_LUNG_CANCER BIOCARTA_NDKDYNAMIN_PATHWAY 19 1 -0.67 0.8033 0.8811 EPN1 http://www.broadinstitute.org/gsea/msigdb/cards/BIOCARTA_NDKDYNAMIN_PATHWAY BIOCARTA_MEF2D_PATHWAY 21 1 -0.67 0.8033 0.8811 HDAC1 http://www.broadinstitute.org/gsea/msigdb/cards/BIOCARTA_MEF2D_PATHWAY BIOCARTA_TEL_PATHWAY 18 1 -0.67 0.8033 0.8811 MYC http://www.broadinstitute.org/gsea/msigdb/cards/BIOCARTA_TEL_PATHWAY BIOCARTA_CTLA4_PATHWAY 21 1 -0.67 0.8033 0.8811 ICOSLG http://www.broadinstitute.org/gsea/msigdb/cards/BIOCARTA_CTLA4_PATHWAY KEGG_ALPHA_LINOLENIC_ACID_METABOLISM 19 1 -0.67 0.8033 0.8811 PLA2G2E http://www.broadinstitute.org/gsea/msigdb/cards/KEGG_ALPHA_LINOLENIC_ACID_METABOLISM KEGG_HUNTINGTONS_DISEASE 183 12 -0.32 0.8059 0.8811 CREB3L1,CREBBP,HDAC1,UQCRC2,NDUFS6,NDUFS5,POLR2G,POLR2I,TFAM,CREB3,NDUFA9,ATP5A1 http://www.broadinstitute.org/gsea/msigdb/cards/KEGG_HUNTINGTONS_DISEASE BIOCARTA_TID_PATHWAY 19 1 -0.75 0.8203 0.8872 TNF http://www.broadinstitute.org/gsea/msigdb/cards/BIOCARTA_TID_PATHWAY BIOCARTA_STATHMIN_PATHWAY 19 1 -0.75 0.8203 0.8872 PRKAR2B http://www.broadinstitute.org/gsea/msigdb/cards/BIOCARTA_STATHMIN_PATHWAY KEGG_CYTOKINE_CYTOKINE_RECEPTOR_INTERACTION 267 19 -0.28 0.818 0.8872 IFNE,CCBP2,IFNA5,TNFRSF10A,TNFRSF10C,IL3,CCL18,CCL11,CCL13,PDGFA,TNFRSF12A,IL8RA,CXCR5,OSM,AMH,ACVR1,TNF,EDA2R,TNFSF9 http://www.broadinstitute.org/gsea/msigdb/cards/KEGG_CYTOKINE_CYTOKINE_RECEPTOR_INTERACTION BIOCARTA_FMLP_PATHWAY 37 2 -0.67 0.8297 0.8937 MAP2K1,RAF1 http://www.broadinstitute.org/gsea/msigdb/cards/BIOCARTA_FMLP_PATHWAY BIOCARTA_IGF1MTOR_PATHWAY 20 1 -0.82 0.8358 0.8937 EIF2S1 http://www.broadinstitute.org/gsea/msigdb/cards/BIOCARTA_IGF1MTOR_PATHWAY BIOCARTA_TOLL_PATHWAY 37 2 -0.71 0.841 0.8937 PGLYRP1,FOS http://www.broadinstitute.org/gsea/msigdb/cards/BIOCARTA_TOLL_PATHWAY KEGG_GLYCOSAMINOGLYCAN_DEGRADATION 21 1 -0.82 0.8358 0.8937 HS3ST3A1 http://www.broadinstitute.org/gsea/msigdb/cards/KEGG_GLYCOSAMINOGLYCAN_DEGRADATION KEGG_MTOR_SIGNALING_PATHWAY 52 3 -0.61 0.8381 0.8937 RICTOR,RPS6KA1,RPS6KA2 http://www.broadinstitute.org/gsea/msigdb/cards/KEGG_MTOR_SIGNALING_PATHWAY BIOCARTA_NOS1_PATHWAY 22 1 -0.89 0.85 0.897 PRKAR2B http://www.broadinstitute.org/gsea/msigdb/cards/BIOCARTA_NOS1_PATHWAY KEGG_PARKINSONS_DISEASE 130 7 -0.47 0.8474 0.897 SLC6A3,LRRK2,UQCRC2,NDUFS6,NDUFS5,NDUFA9,ATP5A1 http://www.broadinstitute.org/gsea/msigdb/cards/KEGG_PARKINSONS_DISEASE KEGG_BIOSYNTHESIS_OF_UNSATURATED_FATTY_ACIDS 22 1 -0.96 0.863 0.9032 ACOT7 http://www.broadinstitute.org/gsea/msigdb/cards/KEGG_BIOSYNTHESIS_OF_UNSATURATED_FATTY_ACIDS KEGG_RENAL_CELL_CARCINOMA 70 4 -0.63 0.8648 0.9032 SOS1,MAP2K1,CREBBP,RAF1 http://www.broadinstitute.org/gsea/msigdb/cards/KEGG_RENAL_CELL_CARCINOMA KEGG_PANCREATIC_CANCER 70 4 -0.63 0.8648 0.9032 E2F2,RALA,MAP2K1,RAF1 http://www.broadinstitute.org/gsea/msigdb/cards/KEGG_PANCREATIC_CANCER BIOCARTA_CTCF_PATHWAY 23 1 -1.02 0.8748 0.9043 MYC http://www.broadinstitute.org/gsea/msigdb/cards/BIOCARTA_CTCF_PATHWAY BIOCARTA_NFKB_PATHWAY 23 1 -1.02 0.8748 0.9043 TNF http://www.broadinstitute.org/gsea/msigdb/cards/BIOCARTA_NFKB_PATHWAY KEGG_NICOTINATE_AND_NICOTINAMIDE_METABOLISM 23 1 -1.02 0.8748 0.9043 NADK http://www.broadinstitute.org/gsea/msigdb/cards/KEGG_NICOTINATE_AND_NICOTINAMIDE_METABOLISM KEGG_ASCORBATE_AND_ALDARATE_METABOLISM 25 1 -1.08 0.8856 0.9124 UGT2B17 http://www.broadinstitute.org/gsea/msigdb/cards/KEGG_ASCORBATE_AND_ALDARATE_METABOLISM BIOCARTA_MCALPAIN_PATHWAY 25 1 -1.14 0.8955 0.9133 PRKAR2B http://www.broadinstitute.org/gsea/msigdb/cards/BIOCARTA_MCALPAIN_PATHWAY BIOCARTA_STRESS_PATHWAY 25 1 -1.14 0.8955 0.9133 TNF http://www.broadinstitute.org/gsea/msigdb/cards/BIOCARTA_STRESS_PATHWAY KEGG_GLYCOSYLPHOSPHATIDYLINOSITOL_GPI_ANCHOR_BIOSYNTHESIS 25 1 -1.14 0.8955 0.9133 GPAA1 http://www.broadinstitute.org/gsea/msigdb/cards/KEGG_GLYCOSYLPHOSPHATIDYLINOSITOL_GPI_ANCHOR_BIOSYNTHESIS KEGG_AMINO_SUGAR_AND_NUCLEOTIDE_SUGAR_METABOLISM 44 2 -0.96 0.9032 0.918 HK3,PMM1 http://www.broadinstitute.org/gsea/msigdb/cards/KEGG_AMINO_SUGAR_AND_NUCLEOTIDE_SUGAR_METABOLISM BIOCARTA_NO1_PATHWAY 31 1 -1.4 0.9335 0.9182 PRKAR2B http://www.broadinstitute.org/gsea/msigdb/cards/BIOCARTA_NO1_PATHWAY BIOCARTA_ARAP_PATHWAY 18 0 0 1 0.9182 http://www.broadinstitute.org/gsea/msigdb/cards/BIOCARTA_ARAP_PATHWAY BIOCARTA_AGR_PATHWAY 36 1 -1.67 0.9614 0.9182 MUSK http://www.broadinstitute.org/gsea/msigdb/cards/BIOCARTA_AGR_PATHWAY BIOCARTA_AKT_PATHWAY 22 0 0 1 0.9182 http://www.broadinstitute.org/gsea/msigdb/cards/BIOCARTA_AKT_PATHWAY BIOCARTA_CD40_PATHWAY 15 0 0 1 0.9182 http://www.broadinstitute.org/gsea/msigdb/cards/BIOCARTA_CD40_PATHWAY BIOCARTA_HDAC_PATHWAY 30 1 -1.36 0.9272 0.9182 HDAC5 http://www.broadinstitute.org/gsea/msigdb/cards/BIOCARTA_HDAC_PATHWAY BIOCARTA_GCR_PATHWAY 20 0 0 1 0.9182 http://www.broadinstitute.org/gsea/msigdb/cards/BIOCARTA_GCR_PATHWAY BIOCARTA_CELLCYCLE_PATHWAY 23 0 0 1 0.9182 http://www.broadinstitute.org/gsea/msigdb/cards/BIOCARTA_CELLCYCLE_PATHWAY BIOCARTA_CALCINEURIN_PATHWAY 19 0 0 1 0.9182 http://www.broadinstitute.org/gsea/msigdb/cards/BIOCARTA_CALCINEURIN_PATHWAY BIOCARTA_HIF_PATHWAY 15 0 0 1 0.9182 http://www.broadinstitute.org/gsea/msigdb/cards/BIOCARTA_HIF_PATHWAY BIOCARTA_IL12_PATHWAY 23 0 0 1 0.9182 http://www.broadinstitute.org/gsea/msigdb/cards/BIOCARTA_IL12_PATHWAY BIOCARTA_IL22BP_PATHWAY 16 0 0 1 0.9182 http://www.broadinstitute.org/gsea/msigdb/cards/BIOCARTA_IL22BP_PATHWAY BIOCARTA_GSK3_PATHWAY 27 1 -1.25 0.9128 0.9182 EHHADH http://www.broadinstitute.org/gsea/msigdb/cards/BIOCARTA_GSK3_PATHWAY BIOCARTA_NO2IL12_PATHWAY 17 0 0 1 0.9182 http://www.broadinstitute.org/gsea/msigdb/cards/BIOCARTA_NO2IL12_PATHWAY BIOCARTA_TOB1_PATHWAY 21 0 0 1 0.9182 http://www.broadinstitute.org/gsea/msigdb/cards/BIOCARTA_TOB1_PATHWAY BIOCARTA_NKT_PATHWAY 28 0 0 1 0.9182 http://www.broadinstitute.org/gsea/msigdb/cards/BIOCARTA_NKT_PATHWAY BIOCARTA_IL1R_PATHWAY 33 1 -1.54 0.9493 0.9182 TNF http://www.broadinstitute.org/gsea/msigdb/cards/BIOCARTA_IL1R_PATHWAY BIOCARTA_TALL1_PATHWAY 15 0 0 1 0.9182 http://www.broadinstitute.org/gsea/msigdb/cards/BIOCARTA_TALL1_PATHWAY BIOCARTA_TH1TH2_PATHWAY 19 0 0 1 0.9182 http://www.broadinstitute.org/gsea/msigdb/cards/BIOCARTA_TH1TH2_PATHWAY BIOCARTA_41BB_PATHWAY 17 0 0 1 0.9182 http://www.broadinstitute.org/gsea/msigdb/cards/BIOCARTA_41BB_PATHWAY BIOCARTA_TNFR2_PATHWAY 18 0 0 1 0.9182 http://www.broadinstitute.org/gsea/msigdb/cards/BIOCARTA_TNFR2_PATHWAY KEGG_PENTOSE_PHOSPHATE_PATHWAY 27 1 -1.25 0.9128 0.9182 PGLS http://www.broadinstitute.org/gsea/msigdb/cards/KEGG_PENTOSE_PHOSPHATE_PATHWAY KEGG_PENTOSE_AND_GLUCURONATE_INTERCONVERSIONS 28 1 -1.25 0.9128 0.9182 UGT2B17 http://www.broadinstitute.org/gsea/msigdb/cards/KEGG_PENTOSE_AND_GLUCURONATE_INTERCONVERSIONS KEGG_PRIMARY_BILE_ACID_BIOSYNTHESIS 16 0 0 1 0.9182 http://www.broadinstitute.org/gsea/msigdb/cards/KEGG_PRIMARY_BILE_ACID_BIOSYNTHESIS KEGG_GLYCOSAMINOGLYCAN_BIOSYNTHESIS_KERATAN_SULFATE 15 0 0 1 0.9182 http://www.broadinstitute.org/gsea/msigdb/cards/KEGG_GLYCOSAMINOGLYCAN_BIOSYNTHESIS_KERATAN_SULFATE KEGG_GLYCEROLIPID_METABOLISM 49 2 -1.11 0.9328 0.9182 PNPLA3,GLYCTK http://www.broadinstitute.org/gsea/msigdb/cards/KEGG_GLYCEROLIPID_METABOLISM KEGG_ETHER_LIPID_METABOLISM 33 1 -1.5 0.9445 0.9182 PLA2G2E http://www.broadinstitute.org/gsea/msigdb/cards/KEGG_ETHER_LIPID_METABOLISM KEGG_RIBOFLAVIN_METABOLISM 16 0 0 1 0.9182 http://www.broadinstitute.org/gsea/msigdb/cards/KEGG_RIBOFLAVIN_METABOLISM KEGG_PANTOTHENATE_AND_COA_BIOSYNTHESIS 16 0 0 1 0.9182 http://www.broadinstitute.org/gsea/msigdb/cards/KEGG_PANTOTHENATE_AND_COA_BIOSYNTHESIS KEGG_NITROGEN_METABOLISM 23 0 0 1 0.9182 http://www.broadinstitute.org/gsea/msigdb/cards/KEGG_NITROGEN_METABOLISM KEGG_PHOSPHATIDYLINOSITOL_SIGNALING_SYSTEM 76 3 -1.16 0.965 0.9182 ITPKB,PIP5K1A,PMPCA http://www.broadinstitute.org/gsea/msigdb/cards/KEGG_PHOSPHATIDYLINOSITOL_SIGNALING_SYSTEM KEGG_JAK_STAT_SIGNALING_PATHWAY 155 9 -0.59 0.9198 0.9182 IFNE,SOCS2,SOCS6,IFNA5,CREBBP,MYC,OSM,SOS1,IL3 http://www.broadinstitute.org/gsea/msigdb/cards/KEGG_JAK_STAT_SIGNALING_PATHWAY