Pathway Nof Genes Nof Marker Enrichment P value Q value Marker Genes in Pathway Pathway Info KEGG_OXIDATIVE_PHOSPHORYLATION 133 31 1.62 0 0 NDUFAB1,ATP6V1G3,ATP12A,ATP6V1B1,COX8A,PPA2,UQCRC2,COX11,UQCRFS1,ATP5L,NDUFS3,ATP5H,ATP6V1H,NDUFA10,ATP6V1A,UQCRH,UQCRB,NDUFB5,NDUFB8,ATP6V1G2,NDUFB1,NDUFB2,TCIRG1,NDUFA5,COX7A2,NDUFA8,ATP5F1,NDUFA1,SDHB,SDHD,ATP6V0A4 http://www.broadinstitute.org/gsea/msigdb/cards/KEGG_OXIDATIVE_PHOSPHORYLATION KEGG_CELL_CYCLE 128 25 1.19 1e-04 0.0049 PTTG2,PTTG1,TGFB1,CCNA2,ESPL1,SKP1,ORC1L,CHEK2,SMAD4,CDC20,CDC26,CDC14B,CDC45L,CDC7,CDC2,MCM4,MCM5,MCM6,BUB1B,BUB1,CDC25C,YWHAE,CDC25B,CCNB2,ORC3L http://www.broadinstitute.org/gsea/msigdb/cards/KEGG_CELL_CYCLE KEGG_PARKINSONS_DISEASE 130 23 1.24 1e-04 0.0049 NDUFAB1,UBA7,COX8A,UQCRC2,UQCRFS1,NDUFS3,ATP5H,SLC25A4,NDUFA10,UQCRH,UBB,UQCRB,NDUFB5,NDUFB8,NDUFB1,NDUFB2,NDUFA5,COX7A2,NDUFA8,ATP5F1,NDUFA1,SDHB,SDHD http://www.broadinstitute.org/gsea/msigdb/cards/KEGG_PARKINSONS_DISEASE KEGG_PATHOGENIC_ESCHERICHIA_COLI_INFECTION 59 15 1.65 0 0.0049 OCLN,TLR5,CTNNB1,RHOA,TUBB6,TUBA1A,TUBA1B,TUBB3,LY96,ARPC1B,WASL,EZR,TUBA3C,TUBA3D,CD14 http://www.broadinstitute.org/gsea/msigdb/cards/KEGG_PATHOGENIC_ESCHERICHIA_COLI_INFECTION KEGG_HEMATOPOIETIC_CELL_LINEAGE 88 19 1.36 1e-04 0.0055 GYPA,CD44,IL4R,CSF3R,CD3G,IL11RA,IL1R2,KIT,ITGAM,CD9,FCGR1A,CD2,CD5,IL6,IL2RA,ITGA3,CD19,ITGA5,CD14 http://www.broadinstitute.org/gsea/msigdb/cards/KEGG_HEMATOPOIETIC_CELL_LINEAGE KEGG_VIBRIO_CHOLERAE_INFECTION 56 14 1.55 2e-04 0.0082 ADCY3,PDIA4,PRKACB,ATP6V1H,ATP6V1A,SEC61B,ATP6V1G3,ATP6V1G2,ATP6V1B1,TCIRG1,SLC12A2,TJP1,PLCG2,ATP6V0A4 http://www.broadinstitute.org/gsea/msigdb/cards/KEGG_VIBRIO_CHOLERAE_INFECTION KEGG_HUNTINGTONS_DISEASE 183 29 0.95 4e-04 0.0154 NDUFAB1,TBP,BDNF,TBPL1,PPARGC1A,APEX1,COX8A,UQCRC2,UQCRFS1,NDUFS3,ATP5H,SLC25A4,NDUFA10,UQCRH,UQCRB,POLR2H,NDUFB5,NDUFB8,POLR2C,NDUFB1,NDUFB2,NDUFA5,COX7A2,NDUFA8,ATP5F1,NDUFA1,SDHB,AP2A1,SDHD http://www.broadinstitute.org/gsea/msigdb/cards/KEGG_HUNTINGTONS_DISEASE KEGG_ADIPOCYTOKINE_SIGNALING_PATHWAY 67 15 1.34 5e-04 0.0206 CAMKK2,SLC2A4,SLC2A1,CHUK,SOCS3,PRKAB1,PPARGC1A,G6PC,MAPK8,TNFRSF1A,ACSL1,PRKAA1,PRKAA2,ACSL3,CPT1A http://www.broadinstitute.org/gsea/msigdb/cards/KEGG_ADIPOCYTOKINE_SIGNALING_PATHWAY BIOCARTA_CHREBP2_PATHWAY 44 11 1.57 7e-04 0.0246 PPP2R5A,PPP2CA,PRKAA1,PRKAA2,PRKACB,PPP2R2C,PPP2R1B,PRKAB1,YWHAE,PRKAR1A,PPP2R5E http://www.broadinstitute.org/gsea/msigdb/cards/BIOCARTA_CHREBP2_PATHWAY BIOCARTA_EIF_PATHWAY 16 6 2.18 0.0011 0.0278 EIF5,EIF4E,EIF4A2,EIF2S1,EEF2K,EIF1 http://www.broadinstitute.org/gsea/msigdb/cards/BIOCARTA_EIF_PATHWAY BIOCARTA_AKAPCENTROSOME_PATHWAY 15 6 2.18 0.0011 0.0278 CDC2,AKAP9,PRKCE,PPP2CA,RHOA,PRKACB http://www.broadinstitute.org/gsea/msigdb/cards/BIOCARTA_AKAPCENTROSOME_PATHWAY KEGG_PEROXISOME 78 16 1.22 0.001 0.0278 ACOX1,EHHADH,PRDX5,PEX3,CAT,PECI,CROT,HACL1,ABCD1,ACSL1,PEX19,IDH1,PEX12,ACSL3,EPHX2,PHYH http://www.broadinstitute.org/gsea/msigdb/cards/KEGG_PEROXISOME KEGG_OOCYTE_MEIOSIS 114 20 1.02 0.0016 0.0365 ADCY3,ADCY7,PPP2R5A,PTTG2,AURKA,PTTG1,PRKACB,ESPL1,SKP1,PPP2R5E,CDC20,CDC26,PPP2R1B,CDC2,PPP2CA,BUB1,CDC25C,YWHAE,CCNB2,CALM1 http://www.broadinstitute.org/gsea/msigdb/cards/KEGG_OOCYTE_MEIOSIS KEGG_ONE_CARBON_POOL_BY_FOLATE 17 6 2 0.0023 0.0506 SHMT2,MTHFD2L,ALDH1L1,MTHFD1L,MTHFD2,MTFMT http://www.broadinstitute.org/gsea/msigdb/cards/KEGG_ONE_CARBON_POOL_BY_FOLATE KEGG_TYROSINE_METABOLISM 42 10 1.43 0.0027 0.0555 PNMT,IL4I1,FANCA,GOT1,GSTZ1,HYAL1,LCMT2,TAT,ALDH3B1,TRMT11 http://www.broadinstitute.org/gsea/msigdb/cards/KEGG_TYROSINE_METABOLISM BIOCARTA_MCM_PATHWAY 18 6 1.92 0.0032 0.0616 MCM4,MCM5,ORC1L,MCM6,CDT1,ORC3L http://www.broadinstitute.org/gsea/msigdb/cards/BIOCARTA_MCM_PATHWAY KEGG_ALZHEIMERS_DISEASE 167 24 0.81 0.0041 0.0735 NDUFAB1,APOE,COX8A,UQCRC2,UQCRFS1,NDUFS3,ATP5H,NDUFA10,UQCRH,UQCRB,BID,NDUFB5,NDUFB8,NDUFB1,NDUFB2,TNFRSF1A,NDUFA5,COX7A2,NDUFA8,ATP5F1,NDUFA1,SDHB,SDHD,CALM1 http://www.broadinstitute.org/gsea/msigdb/cards/KEGG_ALZHEIMERS_DISEASE KEGG_ECM_RECEPTOR_INTERACTION 84 15 1.02 0.0057 0.0965 SDC2,CD44,COL1A2,COL1A1,IBSP,TNC,COL3A1,HMMR,COL6A2,THBS2,THBS3,FN1,ITGA3,COL5A1,ITGA5 http://www.broadinstitute.org/gsea/msigdb/cards/KEGG_ECM_RECEPTOR_INTERACTION KEGG_REGULATION_OF_AUTOPHAGY 35 8 1.46 0.0063 0.0966 ATG5,PIK3C3,PRKAA1,PRKAA2,PIK3R4,GABARAPL2,GABARAPL1,ATG4A http://www.broadinstitute.org/gsea/msigdb/cards/KEGG_REGULATION_OF_AUTOPHAGY KEGG_NOD_LIKE_RECEPTOR_SIGNALING_PATHWAY 62 12 1.13 0.0066 0.0966 CASP5,NLRC4,NOD2,CHUK,HSP90AA1,MAPK8,PYDC1,PYCARD,PSTPIP1,IL6,CARD9,HSP90B1 http://www.broadinstitute.org/gsea/msigdb/cards/KEGG_NOD_LIKE_RECEPTOR_SIGNALING_PATHWAY KEGG_COLORECTAL_CANCER 62 12 1.13 0.0066 0.0966 MLH1,TGFB1,CTNNB1,RHOA,BRAF,LEF1,MAPK8,KRAS,RAC2,TGFBR2,SMAD4,BIRC5 http://www.broadinstitute.org/gsea/msigdb/cards/KEGG_COLORECTAL_CANCER BIOCARTA_GSK3_PATHWAY 27 7 1.55 0.0071 0.0983 CTNNB1,PPP2CA,EHHADH,IRAK1,LY96,LEF1,CD14 http://www.broadinstitute.org/gsea/msigdb/cards/BIOCARTA_GSK3_PATHWAY KEGG_FATTY_ACID_METABOLISM 42 9 1.31 0.0077 0.1026 ACOX1,EHHADH,DCI,HADHA,ACSL1,ACSL3,ACAA2,PECI,CPT1A http://www.broadinstitute.org/gsea/msigdb/cards/KEGG_FATTY_ACID_METABOLISM BIOCARTA_AKT_PATHWAY 22 6 1.63 0.0096 0.1091 HSP90AA1,FOXO1,FOXO4,PPP2CA,CHUK,GHR http://www.broadinstitute.org/gsea/msigdb/cards/BIOCARTA_AKT_PATHWAY KEGG_BIOSYNTHESIS_OF_UNSATURATED_FATTY_ACIDS 22 6 1.63 0.0096 0.1091 ACOX1,FADS1,HSD17B12,HADHA,ACOT4,ACOT7 http://www.broadinstitute.org/gsea/msigdb/cards/KEGG_BIOSYNTHESIS_OF_UNSATURATED_FATTY_ACIDS KEGG_TIGHT_JUNCTION 134 20 0.79 0.0096 0.1091 OCLN,VAPA,ZAK,CTNNB1,RRAS,MAGI3,MAGI2,ACTN1,LLGL2,KRAS,PPP2R2C,EPB41,MYLPF,CLDN8,RHOA,PPP2R1B,MPP5,PRKCE,PPP2CA,TJP1 http://www.broadinstitute.org/gsea/msigdb/cards/KEGG_TIGHT_JUNCTION KEGG_GAP_JUNCTION 90 15 0.95 0.0088 0.1091 ADCY3,ADCY7,TUBB6,PRKACB,PDGFD,TUBA1A,TUBA1B,TUBB3,CDC2,MAPK7,KRAS,TUBA3C,TUBA3D,TJP1,CSNK1D http://www.broadinstitute.org/gsea/msigdb/cards/KEGG_GAP_JUNCTION BIOCARTA_NO2IL12_PATHWAY 17 5 1.74 0.0127 0.1271 CD3G,CXCR3,TYK2,STAT4,CD2 http://www.broadinstitute.org/gsea/msigdb/cards/BIOCARTA_NO2IL12_PATHWAY KEGG_CITRATE_CYCLE_TCA_CYCLE 32 7 1.4 0.0129 0.1271 IDH1,SUCLG1,IDH3B,DLAT,SDHB,SDHD,DLD http://www.broadinstitute.org/gsea/msigdb/cards/KEGG_CITRATE_CYCLE_TCA_CYCLE KEGG_PROTEIN_EXPORT 24 6 1.56 0.012 0.1271 SRP14,OXA1L,SEC11A,SEC62,SEC61B,SPCS1 http://www.broadinstitute.org/gsea/msigdb/cards/KEGG_PROTEIN_EXPORT KEGG_CYTOKINE_CYTOKINE_RECEPTOR_INTERACTION 267 34 0.56 0.0126 0.1271 CD40,CCR7,CCR6,IL1R2,CD70,TGFBR2,IL4R,GHR,LTBR,CCR1,KIT,CD27,IL6,CCL19,CCL18,TGFB1,IL17RA,CSF3R,IL15RA,IL11RA,EDA,IL22RA1,CXCL13,IL21R,CXCR3,LTB,EDAR,TNFRSF9,ACVR2A,TNFSF13B,TNFRSF25,TNFRSF1A,IL2RB,IL2RA http://www.broadinstitute.org/gsea/msigdb/cards/KEGG_CYTOKINE_CYTOKINE_RECEPTOR_INTERACTION KEGG_SNARE_INTERACTIONS_IN_VESICULAR_TRANSPORT 38 8 1.25 0.0151 0.1385 SNAP29,STX7,STX17,STX16,STX6,STX4,STX3,VAMP2 http://www.broadinstitute.org/gsea/msigdb/cards/KEGG_SNARE_INTERACTIONS_IN_VESICULAR_TRANSPORT KEGG_INSULIN_SIGNALING_PATHWAY 137 20 0.73 0.0154 0.1385 FOXO1,SLC2A4,PRKACB,BRAF,PTPRF,SOCS3,PRKAB1,SOCS6,KHSRP,PPARGC1A,MAPK8,KRAS,EIF4E,PRKAR1A,SHC4,G6PC,HK1,PRKAA1,PRKAA2,CALM1 http://www.broadinstitute.org/gsea/msigdb/cards/KEGG_INSULIN_SIGNALING_PATHWAY KEGG_PROGESTERONE_MEDIATED_OOCYTE_MATURATION 86 14 0.9 0.0149 0.1385 ADCY3,ADCY7,PRKACB,CCNA2,CDC2,HSP90AA1,BRAF,MAPK8,KRAS,BUB1,CDC25C,CDC26,CDC25B,CCNB2 http://www.broadinstitute.org/gsea/msigdb/cards/KEGG_PROGESTERONE_MEDIATED_OOCYTE_MATURATION KEGG_PHENYLALANINE_METABOLISM 18 5 1.65 0.0164 0.143 HYAL1,IL4I1,TAT,ALDH3B1,GOT1 http://www.broadinstitute.org/gsea/msigdb/cards/KEGG_PHENYLALANINE_METABOLISM BIOCARTA_TOB1_PATHWAY 21 5 1.58 0.0207 0.1707 IL2RA,CD3G,TGFBR2,SMAD4,TGFB1 http://www.broadinstitute.org/gsea/msigdb/cards/BIOCARTA_TOB1_PATHWAY BIOCARTA_STATHMIN_PATHWAY 19 5 1.58 0.0207 0.1707 CDC2,CD3G,PRKAR1A,CD2,PRKACB http://www.broadinstitute.org/gsea/msigdb/cards/BIOCARTA_STATHMIN_PATHWAY KEGG_ENDOCYTOSIS 183 24 0.61 0.0213 0.1715 CHMP4C,CHMP5,CHMP4A,WWP1,VPS4B,PDCD6IP,ARFGAP3,ARF6,CHMP2B,IQSEC2,RAB11FIP2,ADRB2,CHMP1B,RAB5A,SH3KBP1,USP8,KIT,HSPA6,RAB11A,NEDD4L,IL2RB,IL2RA,AP2A1,VPS24 http://www.broadinstitute.org/gsea/msigdb/cards/KEGG_ENDOCYTOSIS KEGG_MAPK_SIGNALING_PATHWAY 267 33 0.5 0.0239 0.1826 BDNF,RAPGEF2,MAPKSP1,BRAF,PTPRR,MAPK8,MAPK7,IL1R2,CACNB2,KRAS,RAC2,TGFBR2,FLNC,MAP3K12,CD14,ZAK,FGF14,FGF13,TGFB1,RRAS,PRKACB,RELB,MAP4K3,RASGRF2,MAPKAPK2,NR4A1,CACNA2D2,CACNA2D4,MAX,CHUK,TNFRSF1A,HSPA6,CDC25B http://www.broadinstitute.org/gsea/msigdb/cards/KEGG_MAPK_SIGNALING_PATHWAY KEGG_ADHERENS_JUNCTION 75 12 0.9 0.0234 0.1826 CTNNB1,RHOA,PTPRF,LEF1,ACTN1,WASL,ERBB2,RAC2,PTPN6,TGFBR2,SMAD4,TJP1 http://www.broadinstitute.org/gsea/msigdb/cards/KEGG_ADHERENS_JUNCTION BIOCARTA_IL12_PATHWAY 23 5 1.43 0.0313 0.2306 CD3G,CXCR3,TYK2,STAT4,MAPK8 http://www.broadinstitute.org/gsea/msigdb/cards/BIOCARTA_IL12_PATHWAY KEGG_TGF_BETA_SIGNALING_PATHWAY 86 13 0.79 0.0322 0.2306 TGFB1,RHOA,PITX2,PPP2R1B,SKP1,LEFTY1,ACVR2A,PPP2CA,THBS2,THBS3,TGFBR2,SMAD4,BMP5 http://www.broadinstitute.org/gsea/msigdb/cards/KEGG_TGF_BETA_SIGNALING_PATHWAY KEGG_EPITHELIAL_CELL_SIGNALING_IN_HELICOBACTER_PYLORI_INFECTION 68 11 0.87 0.0325 0.2306 CHUK,ATP6V1H,ATP6V1A,MAPK8,ATP6V1G3,ATP6V1G2,ATP6V1B1,TCIRG1,TJP1,PLCG2,ATP6V0A4 http://www.broadinstitute.org/gsea/msigdb/cards/KEGG_EPITHELIAL_CELL_SIGNALING_IN_HELICOBACTER_PYLORI_INFECTION KEGG_ABC_TRANSPORTERS 44 8 1.04 0.0345 0.234 ABCA8,ABCD1,ABCA3,ABCB7,ABCB6,ABCC3,ABCC1,ABCC2 http://www.broadinstitute.org/gsea/msigdb/cards/KEGG_ABC_TRANSPORTERS KEGG_VASOPRESSIN_REGULATED_WATER_REABSORPTION 44 8 1.04 0.0345 0.234 ADCY3,DYNC1LI1,RAB11A,PRKACB,STX4,DCTN6,RAB5A,VAMP2 http://www.broadinstitute.org/gsea/msigdb/cards/KEGG_VASOPRESSIN_REGULATED_WATER_REABSORPTION BIOCARTA_TALL1_PATHWAY 15 4 1.6 0.036 0.2343 TNFSF13B,MAPK8,TRAF5,CHUK http://www.broadinstitute.org/gsea/msigdb/cards/BIOCARTA_TALL1_PATHWAY KEGG_PPAR_SIGNALING_PATHWAY 69 11 0.85 0.0357 0.2343 ACOX1,EHHADH,AQP7,GALK2,ACSL1,ACSL3,ANGPTL4,OLR1,CPT1A,CYP8B1,FABP6 http://www.broadinstitute.org/gsea/msigdb/cards/KEGG_PPAR_SIGNALING_PATHWAY KEGG_GLYCOSAMINOGLYCAN_BIOSYNTHESIS_CHONDROITIN_SULFATE 22 5 1.36 0.0377 0.2399 CHPF2,DSE,CHST7,CHST14,CHST15 http://www.broadinstitute.org/gsea/msigdb/cards/KEGG_GLYCOSAMINOGLYCAN_BIOSYNTHESIS_CHONDROITIN_SULFATE KEGG_PANCREATIC_CANCER 70 11 0.83 0.0391 0.2439 TGFB1,RALA,CHUK,BRAF,RAD51,MAPK8,ERBB2,KRAS,RAC2,TGFBR2,SMAD4 http://www.broadinstitute.org/gsea/msigdb/cards/KEGG_PANCREATIC_CANCER KEGG_FOCAL_ADHESION 201 25 0.51 0.0408 0.2492 CTNNB1,BRAF,MAPK8,IBSP,ERBB2,RAC2,PARVG,FLNC,COL3A1,COL6A2,THBS2,THBS3,PDGFD,ACTN1,COL1A2,COL1A1,FN1,MYLPF,ITGA3,VAV1,ITGA5,RHOA,SHC4,TNC,COL5A1 http://www.broadinstitute.org/gsea/msigdb/cards/KEGG_FOCAL_ADHESION BIOCARTA_IL22BP_PATHWAY 16 4 1.5 0.0448 0.2634 IL22RA1,SOCS3,TYK2,STAT4 http://www.broadinstitute.org/gsea/msigdb/cards/BIOCARTA_IL22BP_PATHWAY KEGG_GLYOXYLATE_AND_DICARBOXYLATE_METABOLISM 16 4 1.5 0.0448 0.2634 MTHFD2L,GRHPR,MTHFD1L,MTHFD2 http://www.broadinstitute.org/gsea/msigdb/cards/KEGG_GLYOXYLATE_AND_DICARBOXYLATE_METABOLISM KEGG_REGULATION_OF_ACTIN_CYTOSKELETON 215 26 0.47 0.0481 0.2774 BRAF,KRAS,RAC2,NCKAP1L,ARHGEF7,EZR,CD14,FGF14,IQGAP2,FGF13,RRAS,PDGFD,ACTN1,ARPC1B,ITGAM,FN1,MYLPF,ITGA3,VAV1,ITGA5,CYFIP2,RHOA,LIMK1,CHRM2,WASL,RDX http://www.broadinstitute.org/gsea/msigdb/cards/KEGG_REGULATION_OF_ACTIN_CYTOSKELETON BIOCARTA_CK1_PATHWAY 17 4 1.41 0.0547 0.3061 CSNK1D,PPP2CA,PRKAR1A,PRKACB http://www.broadinstitute.org/gsea/msigdb/cards/BIOCARTA_CK1_PATHWAY BIOCARTA_RHO_PATHWAY 32 6 1.09 0.0554 0.3061 ARHGAP4,ARHGAP6,ARHGAP1,RHOA,LIMK1,ARPC1B http://www.broadinstitute.org/gsea/msigdb/cards/BIOCARTA_RHO_PATHWAY KEGG_PATHWAYS_IN_CANCER 328 37 0.37 0.057 0.3061 CTNNB1,BRAF,MAPK8,ERBB2,KRAS,RAC2,TGFBR2,SMAD4,SPI1,MLH1,RAD51,BID,PML,KIT,IL6,BIRC5,PTCH1,FGF14,MMP9,FOXO1,FGF13,TGFB1,SLC2A1,CSF3R,RALA,TRAF5,FN1,ITGA3,PLCG2,MAX,RHOA,CHUK,HSP90AA1,LEF1,CEBPA,WNT2B,HSP90B1 http://www.broadinstitute.org/gsea/msigdb/cards/KEGG_PATHWAYS_IN_CANCER KEGG_ACUTE_MYELOID_LEUKEMIA 60 9 0.84 0.0571 0.3061 SPI1,CHUK,BRAF,LEF1,PIM2,PML,KIT,KRAS,CEBPA http://www.broadinstitute.org/gsea/msigdb/cards/KEGG_ACUTE_MYELOID_LEUKEMIA KEGG_GLUTATHIONE_METABOLISM 50 8 0.89 0.0599 0.3156 GSTZ1,SRM,IDH1,GSTO2,GSTA2,GSTA5,MGST1,MGST2 http://www.broadinstitute.org/gsea/msigdb/cards/KEGG_GLUTATHIONE_METABOLISM BIOCARTA_WNT_PATHWAY 26 5 1.12 0.0707 0.35 CTNNB1,PPP2CA,SMAD4,LEF1,CSNK1D http://www.broadinstitute.org/gsea/msigdb/cards/BIOCARTA_WNT_PATHWAY KEGG_GALACTOSE_METABOLISM 26 5 1.12 0.0707 0.35 HK1,GALK2,GALK1,B4GALT2,G6PC http://www.broadinstitute.org/gsea/msigdb/cards/KEGG_GALACTOSE_METABOLISM KEGG_CYSTEINE_AND_METHIONINE_METABOLISM 34 6 1 0.071 0.35 SRM,IL4I1,GOT1,AMD1,TAT,MAT2B http://www.broadinstitute.org/gsea/msigdb/cards/KEGG_CYSTEINE_AND_METHIONINE_METABOLISM KEGG_P53_SIGNALING_PATHWAY 69 10 0.74 0.0696 0.35 SERPINE1,CDC2,CD82,BID,CHEK2,CCNG1,CCNG2,RCHY1,CCNB2,IGFBP3 http://www.broadinstitute.org/gsea/msigdb/cards/KEGG_P53_SIGNALING_PATHWAY KEGG_CARDIAC_MUSCLE_CONTRACTION 78 10 0.67 0.0876 0.4249 UQCRC2,UQCRFS1,UQCRH,UQCRB,CACNB2,TPM4,COX7A2,COX8A,CACNA2D2,CACNA2D4 http://www.broadinstitute.org/gsea/msigdb/cards/KEGG_CARDIAC_MUSCLE_CONTRACTION BIOCARTA_ATM_PATHWAY 20 4 1.18 0.0907 0.4255 CHEK2,RBBP8,RAD51,MAPK8 http://www.broadinstitute.org/gsea/msigdb/cards/BIOCARTA_ATM_PATHWAY BIOCARTA_NKT_PATHWAY 28 5 1.02 0.0917 0.4255 CCR1,CXCR3,TGFB1,IL4R,CCR7 http://www.broadinstitute.org/gsea/msigdb/cards/BIOCARTA_NKT_PATHWAY KEGG_CHEMOKINE_SIGNALING_PATHWAY 190 22 0.41 0.0919 0.4255 ADCY3,ADCY7,PRKACB,GNG7,BRAF,CCR7,CCR6,KRAS,RAC2,VAV1,CXCL13,CXCR3,RHOA,CHUK,SHC4,GNB5,GNB4,WASL,CCR1,GNG11,CCL19,CCL18 http://www.broadinstitute.org/gsea/msigdb/cards/KEGG_CHEMOKINE_SIGNALING_PATHWAY BIOCARTA_TOLL_PATHWAY 37 6 0.88 0.0987 0.4501 TLR2,CHUK,IRAK1,LY96,MAPK8,CD14 http://www.broadinstitute.org/gsea/msigdb/cards/BIOCARTA_TOLL_PATHWAY BIOCARTA_ATRBRCA_PATHWAY 21 4 1.11 0.1046 0.4619 CHEK2,RAD51,ERCC4,RAD17 http://www.broadinstitute.org/gsea/msigdb/cards/BIOCARTA_ATRBRCA_PATHWAY BIOCARTA_TNFR1_PATHWAY 29 5 0.97 0.1032 0.4619 LMNB2,TNFRSF1A,ETFA,MAPK8,PARP1 http://www.broadinstitute.org/gsea/msigdb/cards/BIOCARTA_TNFR1_PATHWAY KEGG_HYPERTROPHIC_CARDIOMYOPATHY_HCM 85 11 0.59 0.1058 0.4619 TGFB1,PRKAB1,CACNB2,TPM4,PRKAA1,PRKAA2,IL6,ITGA3,CACNA2D2,CACNA2D4,ITGA5 http://www.broadinstitute.org/gsea/msigdb/cards/KEGG_HYPERTROPHIC_CARDIOMYOPATHY_HCM KEGG_TRYPTOPHAN_METABOLISM 40 6 0.84 0.109 0.4692 CYP1B1,EHHADH,IL4I1,KMO,HADHA,CAT http://www.broadinstitute.org/gsea/msigdb/cards/KEGG_TRYPTOPHAN_METABOLISM BIOCARTA_DC_PATHWAY 22 4 1.04 0.1195 0.4742 TLR2,CD40,CD2,CD5 http://www.broadinstitute.org/gsea/msigdb/cards/BIOCARTA_DC_PATHWAY BIOCARTA_P53HYPOXIA_PATHWAY 22 4 1.04 0.1195 0.4742 HSP90AA1,CSNK1D,MAPK8,IGFBP3 http://www.broadinstitute.org/gsea/msigdb/cards/BIOCARTA_P53HYPOXIA_PATHWAY KEGG_BETA_ALANINE_METABOLISM 22 4 1.04 0.1195 0.4742 SRM,EHHADH,HADHA,GAD1 http://www.broadinstitute.org/gsea/msigdb/cards/KEGG_BETA_ALANINE_METABOLISM KEGG_UBIQUITIN_MEDIATED_PROTEOLYSIS 137 16 0.45 0.1171 0.4742 CUL5,WWP1,SOCS3,SKP1,UBA7,FBXW7,RCHY1,CDC20,CDC26,UBA3,UBE2C,UBE2B,UBE2K,KLHL13,PML,NEDD4L http://www.broadinstitute.org/gsea/msigdb/cards/KEGG_UBIQUITIN_MEDIATED_PROTEOLYSIS KEGG_JAK_STAT_SIGNALING_PATHWAY 155 18 0.41 0.1182 0.4742 SPRED2,IL15RA,CSF3R,SOCS3,SOCS6,IL11RA,IL22RA1,PTPN6,IL21R,SPRY2,IL4R,GHR,TYK2,STAT4,IL6,IL2RB,IL2RA,CISH http://www.broadinstitute.org/gsea/msigdb/cards/KEGG_JAK_STAT_SIGNALING_PATHWAY KEGG_B_CELL_RECEPTOR_SIGNALING_PATHWAY 75 10 0.6 0.1158 0.4742 CHUK,CARD11,LILRB3,CD72,KRAS,RAC2,PTPN6,VAV1,CD19,PLCG2 http://www.broadinstitute.org/gsea/msigdb/cards/KEGG_B_CELL_RECEPTOR_SIGNALING_PATHWAY BIOCARTA_CD40_PATHWAY 15 3 1.18 0.137 0.481 IKBKAP,CD40,CHUK http://www.broadinstitute.org/gsea/msigdb/cards/BIOCARTA_CD40_PATHWAY BIOCARTA_CTCF_PATHWAY 23 4 0.98 0.1352 0.481 TGFBR2,SMAD4,TGFB1,PPP2CA http://www.broadinstitute.org/gsea/msigdb/cards/BIOCARTA_CTCF_PATHWAY BIOCARTA_IL17_PATHWAY 17 3 1.18 0.137 0.481 IL6,CD3G,CD2 http://www.broadinstitute.org/gsea/msigdb/cards/BIOCARTA_IL17_PATHWAY BIOCARTA_MAPK_PATHWAY 87 11 0.52 0.1349 0.481 TGFB1,MAX,RAPGEF2,CHUK,BRAF,MAP4K3,MAPK8,MAPK7,MAP3K12,MAPKAPK2,CEBPA http://www.broadinstitute.org/gsea/msigdb/cards/BIOCARTA_MAPK_PATHWAY BIOCARTA_PITX2_PATHWAY 15 3 1.18 0.137 0.481 LEF1,CTNNB1,PITX2 http://www.broadinstitute.org/gsea/msigdb/cards/BIOCARTA_PITX2_PATHWAY BIOCARTA_RAS_PATHWAY 23 4 0.98 0.1352 0.481 FOXO4,RHOA,RALA,CHUK http://www.broadinstitute.org/gsea/msigdb/cards/BIOCARTA_RAS_PATHWAY KEGG_ALANINE_ASPARTATE_AND_GLUTAMATE_METABOLISM 32 5 0.87 0.1283 0.481 ASS1,IL4I1,GOT1,GAD1,ALDH5A1 http://www.broadinstitute.org/gsea/msigdb/cards/KEGG_ALANINE_ASPARTATE_AND_GLUTAMATE_METABOLISM KEGG_SPHINGOLIPID_METABOLISM 40 6 0.77 0.1313 0.481 ASAH1,B4GALT6,GAL3ST1,SPTLC1,PPAP2C,SMPD4 http://www.broadinstitute.org/gsea/msigdb/cards/KEGG_SPHINGOLIPID_METABOLISM KEGG_PYRUVATE_METABOLISM 40 6 0.77 0.1313 0.481 LDHD,ACSS1,ACYP1,DLAT,GRHPR,DLD http://www.broadinstitute.org/gsea/msigdb/cards/KEGG_PYRUVATE_METABOLISM KEGG_LEUKOCYTE_TRANSENDOTHELIAL_MIGRATION 118 14 0.45 0.1334 0.481 OCLN,MMP9,CTNNB1,ACTN1,SIPA1,ITGAM,RAC2,MYLPF,VAV1,PLCG2,CLDN8,RHOA,EZR,CYBB http://www.broadinstitute.org/gsea/msigdb/cards/KEGG_LEUKOCYTE_TRANSENDOTHELIAL_MIGRATION BIOCARTA_G2_PATHWAY 24 4 0.92 0.1517 0.4962 CDC2,CHEK2,CDC25C,CDC25B http://www.broadinstitute.org/gsea/msigdb/cards/BIOCARTA_G2_PATHWAY BIOCARTA_MPR_PATHWAY 34 5 0.74 0.1705 0.4962 PRKACB,CDC2,CDC25C,ARPC1B,PRKAR1A http://www.broadinstitute.org/gsea/msigdb/cards/BIOCARTA_MPR_PATHWAY BIOCARTA_MCALPAIN_PATHWAY 25 4 0.86 0.169 0.4962 CXCR3,EZR,PRKACB,PRKAR1A http://www.broadinstitute.org/gsea/msigdb/cards/BIOCARTA_MCALPAIN_PATHWAY BIOCARTA_NTHI_PATHWAY 24 4 0.92 0.1517 0.4962 TGFBR2,TLR2,SMAD4,CHUK http://www.broadinstitute.org/gsea/msigdb/cards/BIOCARTA_NTHI_PATHWAY BIOCARTA_EIF4_PATHWAY 24 4 0.92 0.1517 0.4962 EIF4E,EIF4A2,PABPC1,GHR http://www.broadinstitute.org/gsea/msigdb/cards/BIOCARTA_EIF4_PATHWAY BIOCARTA_CDC42RAC_PATHWAY 16 3 1.09 0.1582 0.4962 ARPC1B,RHOA,WASL http://www.broadinstitute.org/gsea/msigdb/cards/BIOCARTA_CDC42RAC_PATHWAY BIOCARTA_IL1R_PATHWAY 33 5 0.78 0.1559 0.4962 TGFB1,CHUK,IRAK1,IL6,MAPK8 http://www.broadinstitute.org/gsea/msigdb/cards/BIOCARTA_IL1R_PATHWAY BIOCARTA_SHH_PATHWAY 16 3 1.09 0.1582 0.4962 PRKAR1A,PTCH1,PRKACB http://www.broadinstitute.org/gsea/msigdb/cards/BIOCARTA_SHH_PATHWAY KEGG_FRUCTOSE_AND_MANNOSE_METABOLISM 34 5 0.74 0.1705 0.4962 PFKFB4,PFKFB3,HK1,KHSRP,PHPT1 http://www.broadinstitute.org/gsea/msigdb/cards/KEGG_FRUCTOSE_AND_MANNOSE_METABOLISM KEGG_STEROID_BIOSYNTHESIS 17 3 1.09 0.1582 0.4962 TM7SF2,FDFT1,SC5DL http://www.broadinstitute.org/gsea/msigdb/cards/KEGG_STEROID_BIOSYNTHESIS KEGG_PRIMARY_BILE_ACID_BIOSYNTHESIS 16 3 1.09 0.1582 0.4962 HSD3B7,CYP39A1,CYP8B1 http://www.broadinstitute.org/gsea/msigdb/cards/KEGG_PRIMARY_BILE_ACID_BIOSYNTHESIS KEGG_VALINE_LEUCINE_AND_ISOLEUCINE_DEGRADATION 44 6 0.66 0.1683 0.4962 EHHADH,IL4I1,HADHA,ACAA2,DBT,DLD http://www.broadinstitute.org/gsea/msigdb/cards/KEGG_VALINE_LEUCINE_AND_ISOLEUCINE_DEGRADATION KEGG_ARGININE_AND_PROLINE_METABOLISM 54 7 0.61 0.1642 0.4962 CKB,GOT1,P4HA3,PYCR1,SRM,ASS1,AMD1 http://www.broadinstitute.org/gsea/msigdb/cards/KEGG_ARGININE_AND_PROLINE_METABOLISM KEGG_GLYCOSYLPHOSPHATIDYLINOSITOL_GPI_ANCHOR_BIOSYNTHESIS 25 4 0.86 0.169 0.4962 PIGY,PIGW,PIGV,PIGO http://www.broadinstitute.org/gsea/msigdb/cards/KEGG_GLYCOSYLPHOSPHATIDYLINOSITOL_GPI_ANCHOR_BIOSYNTHESIS KEGG_GLYCOSPHINGOLIPID_BIOSYNTHESIS_LACTO_AND_NEOLACTO_SERIES 26 4 0.86 0.169 0.4962 B3GNT4,B3GNT2,B4GALT2,ABO http://www.broadinstitute.org/gsea/msigdb/cards/KEGG_GLYCOSPHINGOLIPID_BIOSYNTHESIS_LACTO_AND_NEOLACTO_SERIES KEGG_BUTANOATE_METABOLISM 34 5 0.78 0.1559 0.4962 EHHADH,HADHA,BDH2,GAD1,ALDH5A1 http://www.broadinstitute.org/gsea/msigdb/cards/KEGG_BUTANOATE_METABOLISM KEGG_BASE_EXCISION_REPAIR 35 5 0.78 0.1559 0.4962 APEX2,APEX1,NEIL3,POLD3,PARP1 http://www.broadinstitute.org/gsea/msigdb/cards/KEGG_BASE_EXCISION_REPAIR KEGG_TOLL_LIKE_RECEPTOR_SIGNALING_PATHWAY 102 12 0.43 0.1687 0.4962 TLR2,TLR5,CD40,MAPK8,IKBKE,EHHADH,CHUK,IRAK1,LY96,IL6,IRF7,CD14 http://www.broadinstitute.org/gsea/msigdb/cards/KEGG_TOLL_LIKE_RECEPTOR_SIGNALING_PATHWAY BIOCARTA_IL10_PATHWAY 17 3 1 0.1804 0.5133 IL6,STAT4,HMOX1 http://www.broadinstitute.org/gsea/msigdb/cards/BIOCARTA_IL10_PATHWAY BIOCARTA_41BB_PATHWAY 17 3 1 0.1804 0.5133 TNFRSF9,MAPK8,CHUK http://www.broadinstitute.org/gsea/msigdb/cards/BIOCARTA_41BB_PATHWAY KEGG_AMINO_SUGAR_AND_NUCLEOTIDE_SUGAR_METABOLISM 44 6 0.63 0.1815 0.5133 HK1,UXS1,GALK2,GALK1,NANP,NPL http://www.broadinstitute.org/gsea/msigdb/cards/KEGG_AMINO_SUGAR_AND_NUCLEOTIDE_SUGAR_METABOLISM BIOCARTA_VIP_PATHWAY 27 4 0.8 0.1868 0.5189 PRKACB,CHUK,PRKAR1A,CALM1 http://www.broadinstitute.org/gsea/msigdb/cards/BIOCARTA_VIP_PATHWAY KEGG_SELENOAMINO_ACID_METABOLISM 26 4 0.8 0.1868 0.5189 PAPSS2,LCMT2,TRMT11,MAT2B http://www.broadinstitute.org/gsea/msigdb/cards/KEGG_SELENOAMINO_ACID_METABOLISM KEGG_INTESTINAL_IMMUNE_NETWORK_FOR_IGA_PRODUCTION 48 6 0.6 0.1951 0.5369 TGFB1,IL15RA,IL6,LTBR,CD40,TNFSF13B http://www.broadinstitute.org/gsea/msigdb/cards/KEGG_INTESTINAL_IMMUNE_NETWORK_FOR_IGA_PRODUCTION BIOCARTA_TEL_PATHWAY 18 3 0.92 0.2034 0.5402 HSP90AA1,KRAS,PPP2CA http://www.broadinstitute.org/gsea/msigdb/cards/BIOCARTA_TEL_PATHWAY BIOCARTA_UCALPAIN_PATHWAY 18 3 0.92 0.2034 0.5402 ACTN1,EZR,RHOA http://www.broadinstitute.org/gsea/msigdb/cards/BIOCARTA_UCALPAIN_PATHWAY KEGG_RNA_DEGRADATION 55 7 0.53 0.2004 0.5402 CNOT2,DCPS,LSM3,EXOSC7,EXOSC3,PAPOLA,WDR61 http://www.broadinstitute.org/gsea/msigdb/cards/KEGG_RNA_DEGRADATION KEGG_CYTOSOLIC_DNA_SENSING_PATHWAY 56 7 0.53 0.2004 0.5402 TMEM173,CHUK,PYCARD,IL6,AIM2,IKBKE,IRF7 http://www.broadinstitute.org/gsea/msigdb/cards/KEGG_CYTOSOLIC_DNA_SENSING_PATHWAY BIOCARTA_KERATINOCYTE_PATHWAY 46 6 0.56 0.2091 0.5459 TNFRSF1A,PPP2CA,CHUK,CEBPA,PRKCE,MAPK8 http://www.broadinstitute.org/gsea/msigdb/cards/BIOCARTA_KERATINOCYTE_PATHWAY KEGG_N_GLYCAN_BIOSYNTHESIS 46 6 0.56 0.2091 0.5459 GPR172B,ALG5,B4GALT2,MGAT3,ALG11,ALG13 http://www.broadinstitute.org/gsea/msigdb/cards/KEGG_N_GLYCAN_BIOSYNTHESIS KEGG_FC_GAMMA_R_MEDIATED_PHAGOCYTOSIS 97 11 0.38 0.2139 0.5537 ARPC1B,ARF6,RAC2,VAV1,ORC3L,PLCG2,LIMK1,PPAP2C,PRKCE,WASL,FCGR1A http://www.broadinstitute.org/gsea/msigdb/cards/KEGG_FC_GAMMA_R_MEDIATED_PHAGOCYTOSIS BIOCARTA_ALK_PATHWAY 37 5 0.61 0.2173 0.5546 TGFB1,CTNNB1,TGFBR2,SMAD4,BMP5 http://www.broadinstitute.org/gsea/msigdb/cards/BIOCARTA_ALK_PATHWAY BIOCARTA_GCR_PATHWAY 20 3 0.84 0.2269 0.5546 HSP90AA1,ADRB2,CALM1 http://www.broadinstitute.org/gsea/msigdb/cards/BIOCARTA_GCR_PATHWAY BIOCARTA_MAL_PATHWAY 19 3 0.84 0.2269 0.5546 LIMK1,RHOA,MAPK8 http://www.broadinstitute.org/gsea/msigdb/cards/BIOCARTA_MAL_PATHWAY BIOCARTA_TGFB_PATHWAY 19 3 0.84 0.2269 0.5546 TGFBR2,SMAD4,TGFB1 http://www.broadinstitute.org/gsea/msigdb/cards/BIOCARTA_TGFB_PATHWAY BIOCARTA_TH1TH2_PATHWAY 19 3 0.84 0.2269 0.5546 IL2RA,CD40,IL4R http://www.broadinstitute.org/gsea/msigdb/cards/BIOCARTA_TH1TH2_PATHWAY KEGG_HOMOLOGOUS_RECOMBINATION 28 4 0.69 0.2242 0.5546 BLM,RAD51,POLD3,RAD54B http://www.broadinstitute.org/gsea/msigdb/cards/KEGG_HOMOLOGOUS_RECOMBINATION KEGG_TYPE_II_DIABETES_MELLITUS 47 6 0.53 0.2234 0.5546 HK1,SLC2A4,SOCS3,SOCS6,PRKCE,MAPK8 http://www.broadinstitute.org/gsea/msigdb/cards/KEGG_TYPE_II_DIABETES_MELLITUS BIOCARTA_IL2RB_PATHWAY 38 5 0.58 0.2337 0.5667 MYO1C,PTPN6,IL2RB,IL2RA,SOCS3 http://www.broadinstitute.org/gsea/msigdb/cards/BIOCARTA_IL2RB_PATHWAY BIOCARTA_NKCELLS_PATHWAY 20 3 0.77 0.251 0.5823 PTPN6,VAV1,ORC3L http://www.broadinstitute.org/gsea/msigdb/cards/BIOCARTA_NKCELLS_PATHWAY BIOCARTA_IGF1MTOR_PATHWAY 20 3 0.77 0.251 0.5823 EIF4E,EIF2S1,PPP2CA http://www.broadinstitute.org/gsea/msigdb/cards/BIOCARTA_IGF1MTOR_PATHWAY KEGG_AMINOACYL_TRNA_BIOSYNTHESIS 41 5 0.54 0.2505 0.5823 TARS2,NARS2,YARS,LARS2,MTFMT http://www.broadinstitute.org/gsea/msigdb/cards/KEGG_AMINOACYL_TRNA_BIOSYNTHESIS KEGG_METABOLISM_OF_XENOBIOTICS_BY_CYTOCHROME_P450 70 8 0.39 0.2516 0.5823 GSTZ1,ALDH3B1,CYP1B1,GSTO2,GSTA2,GSTA5,MGST1,MGST2 http://www.broadinstitute.org/gsea/msigdb/cards/KEGG_METABOLISM_OF_XENOBIOTICS_BY_CYTOCHROME_P450 KEGG_PROSTATE_CANCER 89 10 0.35 0.2468 0.5823 FOXO1,CTNNB1,PDGFD,CHUK,HSP90AA1,BRAF,LEF1,ERBB2,KRAS,HSP90B1 http://www.broadinstitute.org/gsea/msigdb/cards/KEGG_PROSTATE_CANCER KEGG_THYROID_CANCER 29 4 0.64 0.2436 0.5823 CTNNB1,KRAS,BRAF,LEF1 http://www.broadinstitute.org/gsea/msigdb/cards/KEGG_THYROID_CANCER KEGG_DILATED_CARDIOMYOPATHY 92 10 0.33 0.2577 0.5919 ADCY3,ADCY7,TGFB1,PRKACB,CACNB2,TPM4,ITGA3,CACNA2D2,CACNA2D4,ITGA5 http://www.broadinstitute.org/gsea/msigdb/cards/KEGG_DILATED_CARDIOMYOPATHY BIOCARTA_NO1_PATHWAY 31 4 0.6 0.2633 0.6003 PRKACB,HSP90AA1,PRKAR1A,CALM1 http://www.broadinstitute.org/gsea/msigdb/cards/BIOCARTA_NO1_PATHWAY BIOCARTA_NOS1_PATHWAY 22 3 0.69 0.2754 0.6132 PRKAR1A,PRKACB,CALM1 http://www.broadinstitute.org/gsea/msigdb/cards/BIOCARTA_NOS1_PATHWAY BIOCARTA_TFF_PATHWAY 21 3 0.69 0.2754 0.6132 CTNNB1,RHOA,GHR http://www.broadinstitute.org/gsea/msigdb/cards/BIOCARTA_TFF_PATHWAY KEGG_DRUG_METABOLISM_CYTOCHROME_P450 72 8 0.35 0.277 0.6132 GSTZ1,ALDH3B1,CYP2A6,GSTO2,GSTA2,GSTA5,MGST1,MGST2 http://www.broadinstitute.org/gsea/msigdb/cards/KEGG_DRUG_METABOLISM_CYTOCHROME_P450 KEGG_CALCIUM_SIGNALING_PATHWAY 178 18 0.21 0.2736 0.6132 ADCY3,ADCY7,AGTR1,ATP2B4,PRKACB,PLCE1,ERBB2,P2RX7,AVPR1B,PLCG2,PTGER3,SLC25A4,ADRB2,CHRM2,PTAFR,DHX8,PDE1C,CALM1 http://www.broadinstitute.org/gsea/msigdb/cards/KEGG_CALCIUM_SIGNALING_PATHWAY KEGG_GLYCINE_SERINE_AND_THREONINE_METABOLISM 31 4 0.55 0.2833 0.6226 ALAS1,SHMT2,DLD,PSAT1 http://www.broadinstitute.org/gsea/msigdb/cards/KEGG_GLYCINE_SERINE_AND_THREONINE_METABOLISM BIOCARTA_CSK_PATHWAY 24 3 0.63 0.3 0.6307 CD3G,PRKAR1A,PRKACB http://www.broadinstitute.org/gsea/msigdb/cards/BIOCARTA_CSK_PATHWAY BIOCARTA_CHEMICAL_PATHWAY 22 3 0.63 0.3 0.6307 BID,EIF2S1,PARP1 http://www.broadinstitute.org/gsea/msigdb/cards/BIOCARTA_CHEMICAL_PATHWAY BIOCARTA_IL2_PATHWAY 22 3 0.63 0.3 0.6307 IL2RB,IL2RA,MAPK8 http://www.broadinstitute.org/gsea/msigdb/cards/BIOCARTA_IL2_PATHWAY BIOCARTA_IL6_PATHWAY 22 3 0.63 0.3 0.6307 IL6,CEBPB,TYK2 http://www.broadinstitute.org/gsea/msigdb/cards/BIOCARTA_IL6_PATHWAY KEGG_GLYCOLYSIS_GLUCONEOGENESIS 62 7 0.36 0.2947 0.6307 ACSS1,KHSRP,ALDH3B1,G6PC,DLD,HK1,DLAT http://www.broadinstitute.org/gsea/msigdb/cards/KEGG_GLYCOLYSIS_GLUCONEOGENESIS KEGG_PROPANOATE_METABOLISM 33 4 0.5 0.3035 0.6307 EHHADH,HADHA,ACSS1,SUCLG1 http://www.broadinstitute.org/gsea/msigdb/cards/KEGG_PROPANOATE_METABOLISM KEGG_ENDOMETRIAL_CANCER 52 6 0.39 0.2989 0.6307 MLH1,CTNNB1,BRAF,LEF1,ERBB2,KRAS http://www.broadinstitute.org/gsea/msigdb/cards/KEGG_ENDOMETRIAL_CANCER KEGG_BLADDER_CANCER 42 5 0.43 0.3022 0.6307 ERBB2,MMP9,TYMP,KRAS,BRAF http://www.broadinstitute.org/gsea/msigdb/cards/KEGG_BLADDER_CANCER BIOCARTA_CASPASE_PATHWAY 23 3 0.56 0.3247 0.6441 LMNB2,CASP4,PARP1 http://www.broadinstitute.org/gsea/msigdb/cards/BIOCARTA_CASPASE_PATHWAY BIOCARTA_MTOR_PATHWAY 23 3 0.56 0.3247 0.6441 EIF4E,EIF4A2,PPP2CA http://www.broadinstitute.org/gsea/msigdb/cards/BIOCARTA_MTOR_PATHWAY BIOCARTA_NFKB_PATHWAY 23 3 0.56 0.3247 0.6441 IRAK1,TNFRSF1A,CHUK http://www.broadinstitute.org/gsea/msigdb/cards/BIOCARTA_NFKB_PATHWAY BIOCARTA_PTDINS_PATHWAY 23 3 0.56 0.3247 0.6441 PRKCE,AP2A1,RAB5A http://www.broadinstitute.org/gsea/msigdb/cards/BIOCARTA_PTDINS_PATHWAY BIOCARTA_PGC1A_PATHWAY 24 3 0.56 0.3247 0.6441 PPARGC1A,SLC2A4,CALM1 http://www.broadinstitute.org/gsea/msigdb/cards/BIOCARTA_PGC1A_PATHWAY KEGG_MISMATCH_REPAIR 23 3 0.56 0.3247 0.6441 EXO1,MLH1,POLD3 http://www.broadinstitute.org/gsea/msigdb/cards/KEGG_MISMATCH_REPAIR KEGG_ARRHYTHMOGENIC_RIGHT_VENTRICULAR_CARDIOMYOPATHY_ARVC 76 8 0.29 0.3163 0.6441 CTNNB1,LEF1,ACTN1,CACNB2,ITGA3,CACNA2D2,CACNA2D4,ITGA5 http://www.broadinstitute.org/gsea/msigdb/cards/KEGG_ARRHYTHMOGENIC_RIGHT_VENTRICULAR_CARDIOMYOPATHY_ARVC KEGG_WNT_SIGNALING_PATHWAY 151 15 0.18 0.3281 0.6467 PPP2R5A,CTNNB1,PRKACB,SKP1,PPP2R5E,MAPK8,DAAM1,RAC2,SMAD4,SFRP2,RHOA,PPP2R1B,LEF1,PPP2CA,WNT2B http://www.broadinstitute.org/gsea/msigdb/cards/KEGG_WNT_SIGNALING_PATHWAY KEGG_INOSITOL_PHOSPHATE_METABOLISM 54 6 0.33 0.3305 0.6471 IMPA2,PIK3C3,IPMK,PLCE1,INPP5A,PLCG2 http://www.broadinstitute.org/gsea/msigdb/cards/KEGG_INOSITOL_PHOSPHATE_METABOLISM BIOCARTA_TCR_PATHWAY 47 5 0.36 0.3376 0.6535 CD3G,VAV1,ORC3L,MAPK8,CALM1 http://www.broadinstitute.org/gsea/msigdb/cards/BIOCARTA_TCR_PATHWAY KEGG_PYRIMIDINE_METABOLISM 98 10 0.22 0.338 0.6535 NUDT2,NME4,ZNRD1,TK1,POLD3,POLR2H,POLR2C,TYMP,UCK2,UCKL1 http://www.broadinstitute.org/gsea/msigdb/cards/KEGG_PYRIMIDINE_METABOLISM KEGG_PHOSPHATIDYLINOSITOL_SIGNALING_SYSTEM 76 8 0.25 0.3431 0.6591 IMPA2,PIK3C3,CDS1,PLCE1,INPP5A,DGKI,PLCG2,CALM1 http://www.broadinstitute.org/gsea/msigdb/cards/KEGG_PHOSPHATIDYLINOSITOL_SIGNALING_SYSTEM BIOCARTA_NUCLEARRS_PATHWAY 15 2 0.69 0.3484 0.661 ABCC3,NR1H4 http://www.broadinstitute.org/gsea/msigdb/cards/BIOCARTA_NUCLEARRS_PATHWAY KEGG_GLYCOSAMINOGLYCAN_BIOSYNTHESIS_KERATAN_SULFATE 15 2 0.69 0.3484 0.661 B4GALT2,B3GNT2 http://www.broadinstitute.org/gsea/msigdb/cards/KEGG_GLYCOSAMINOGLYCAN_BIOSYNTHESIS_KERATAN_SULFATE BIOCARTA_HIVNEF_PATHWAY 56 6 0.28 0.3624 0.6834 CHUK,MAPK8,BID,LMNB2,TNFRSF1A,PARP1 http://www.broadinstitute.org/gsea/msigdb/cards/BIOCARTA_HIVNEF_PATHWAY KEGG_BASAL_TRANSCRIPTION_FACTORS 36 4 0.37 0.3648 0.6836 TBP,GTF2A2,TAF9,TBPL1 http://www.broadinstitute.org/gsea/msigdb/cards/KEGG_BASAL_TRANSCRIPTION_FACTORS KEGG_FC_EPSILON_RI_SIGNALING_PATHWAY 79 8 0.22 0.3701 0.6895 PRKCE,MAPK8,LCP2,KRAS,RAC2,VAV1,ORC3L,PLCG2 http://www.broadinstitute.org/gsea/msigdb/cards/KEGG_FC_EPSILON_RI_SIGNALING_PATHWAY BIOCARTA_STRESS_PATHWAY 25 3 0.44 0.374 0.6924 TNFRSF1A,CHUK,MAPK8 http://www.broadinstitute.org/gsea/msigdb/cards/BIOCARTA_STRESS_PATHWAY BIOCARTA_ERYTH_PATHWAY 15 2 0.6 0.3809 0.6926 IL6,TGFB1 http://www.broadinstitute.org/gsea/msigdb/cards/BIOCARTA_ERYTH_PATHWAY BIOCARTA_PPARA_PATHWAY 58 6 0.25 0.3784 0.6926 ACOX1,EHHADH,PRKACB,HSP90AA1,PPARGC1A,PRKAR1A http://www.broadinstitute.org/gsea/msigdb/cards/BIOCARTA_PPARA_PATHWAY BIOCARTA_LONGEVITY_PATHWAY 15 2 0.6 0.3809 0.6926 CAT,GHR http://www.broadinstitute.org/gsea/msigdb/cards/BIOCARTA_LONGEVITY_PATHWAY KEGG_DNA_REPLICATION 36 4 0.33 0.3852 0.6932 MCM4,MCM5,MCM6,POLD3 http://www.broadinstitute.org/gsea/msigdb/cards/KEGG_DNA_REPLICATION KEGG_MELANOGENESIS 102 10 0.17 0.3858 0.6932 ADCY3,ADCY7,CTNNB1,MC1R,PRKACB,KRAS,LEF1,KIT,WNT2B,CALM1 http://www.broadinstitute.org/gsea/msigdb/cards/KEGG_MELANOGENESIS BIOCARTA_RELA_PATHWAY 16 2 0.5 0.4127 0.7083 TNFRSF1A,CHUK http://www.broadinstitute.org/gsea/msigdb/cards/BIOCARTA_RELA_PATHWAY BIOCARTA_ARAP_PATHWAY 18 2 0.5 0.4127 0.7083 ARFGAP3,CYTH4 http://www.broadinstitute.org/gsea/msigdb/cards/BIOCARTA_ARAP_PATHWAY BIOCARTA_GATA3_PATHWAY 16 2 0.5 0.4127 0.7083 PRKAR1A,PRKACB http://www.broadinstitute.org/gsea/msigdb/cards/BIOCARTA_GATA3_PATHWAY BIOCARTA_BAD_PATHWAY 26 3 0.39 0.3984 0.7083 KIT,PRKACB,PRKAR1A http://www.broadinstitute.org/gsea/msigdb/cards/BIOCARTA_BAD_PATHWAY KEGG_PURINE_METABOLISM 158 15 0.11 0.4046 0.7083 ADCY3,GMPR2,ADCY7,NUDT2,NME4,ZNRD1,AK1,AK7,POLD3,PDE7B,ADK,POLR2H,POLR2C,PDE1C,PAPSS2 http://www.broadinstitute.org/gsea/msigdb/cards/KEGG_PURINE_METABOLISM KEGG_RIBOFLAVIN_METABOLISM 16 2 0.5 0.4127 0.7083 RFK,PHPT1 http://www.broadinstitute.org/gsea/msigdb/cards/KEGG_RIBOFLAVIN_METABOLISM KEGG_DRUG_METABOLISM_OTHER_ENZYMES 51 5 0.24 0.4089 0.7083 CYP2A6,TK1,TYMP,UCK2,UCKL1 http://www.broadinstitute.org/gsea/msigdb/cards/KEGG_DRUG_METABOLISM_OTHER_ENZYMES KEGG_RIG_I_LIKE_RECEPTOR_SIGNALING_PATHWAY 71 7 0.18 0.411 0.7083 TMEM173,ATG5,CHUK,MAPK8,AZI2,IKBKE,IRF7 http://www.broadinstitute.org/gsea/msigdb/cards/KEGG_RIG_I_LIKE_RECEPTOR_SIGNALING_PATHWAY KEGG_NEUROTROPHIN_SIGNALING_PATHWAY 126 12 0.11 0.4189 0.715 BDNF,BRAF,MAPK8,MAPK7,MAPKAPK2,KRAS,PLCG2,RHOA,SHC4,IRAK1,YWHAE,CALM1 http://www.broadinstitute.org/gsea/msigdb/cards/KEGG_NEUROTROPHIN_SIGNALING_PATHWAY KEGG_AXON_GUIDANCE 129 12 0.1 0.4299 0.7296 PLXNA1,SEMA5B,KRAS,RAC2,MLF2,EPHA4,SEMA6D,SEMA3D,RHOA,SEMA3B,LIMK1,SEMA4B http://www.broadinstitute.org/gsea/msigdb/cards/KEGG_AXON_GUIDANCE BIOCARTA_G1_PATHWAY 28 3 0.28 0.4463 0.737 TGFB1,CDC2,SMAD4 http://www.broadinstitute.org/gsea/msigdb/cards/BIOCARTA_G1_PATHWAY BIOCARTA_LAIR_PATHWAY 17 2 0.41 0.4437 0.737 IL6,SELPLG http://www.broadinstitute.org/gsea/msigdb/cards/BIOCARTA_LAIR_PATHWAY BIOCARTA_GH_PATHWAY 28 3 0.28 0.4463 0.737 SLC2A4,GHR,PTPN6 http://www.broadinstitute.org/gsea/msigdb/cards/BIOCARTA_GH_PATHWAY BIOCARTA_CCR5_PATHWAY 18 2 0.41 0.4437 0.737 MAPK8,CALM1 http://www.broadinstitute.org/gsea/msigdb/cards/BIOCARTA_CCR5_PATHWAY BIOCARTA_PML_PATHWAY 17 2 0.41 0.4437 0.737 PML,TNFRSF1A http://www.broadinstitute.org/gsea/msigdb/cards/BIOCARTA_PML_PATHWAY KEGG_CHRONIC_MYELOID_LEUKEMIA 73 7 0.12 0.4548 0.747 TGFB1,CHUK,SHC4,BRAF,KRAS,TGFBR2,SMAD4 http://www.broadinstitute.org/gsea/msigdb/cards/KEGG_CHRONIC_MYELOID_LEUKEMIA BIOCARTA_NDKDYNAMIN_PATHWAY 19 2 0.33 0.4737 0.7498 AP2A1,CALM1 http://www.broadinstitute.org/gsea/msigdb/cards/BIOCARTA_NDKDYNAMIN_PATHWAY BIOCARTA_P38MAPK_PATHWAY 40 4 0.18 0.4656 0.7498 MAPKAPK2,TGFB1,MAX,RAPGEF2 http://www.broadinstitute.org/gsea/msigdb/cards/BIOCARTA_P38MAPK_PATHWAY BIOCARTA_CARDIACEGF_PATHWAY 18 2 0.33 0.4737 0.7498 AGTR1,RHOA http://www.broadinstitute.org/gsea/msigdb/cards/BIOCARTA_CARDIACEGF_PATHWAY BIOCARTA_TNFR2_PATHWAY 18 2 0.33 0.4737 0.7498 IKBKAP,CHUK http://www.broadinstitute.org/gsea/msigdb/cards/BIOCARTA_TNFR2_PATHWAY KEGG_HISTIDINE_METABOLISM 29 3 0.23 0.4697 0.7498 LCMT2,ALDH3B1,TRMT11 http://www.broadinstitute.org/gsea/msigdb/cards/KEGG_HISTIDINE_METABOLISM KEGG_RNA_POLYMERASE 29 3 0.23 0.4697 0.7498 POLR2H,ZNRD1,POLR2C http://www.broadinstitute.org/gsea/msigdb/cards/KEGG_RNA_POLYMERASE KEGG_CELL_ADHESION_MOLECULES_CAMS 134 12 0.06 0.4626 0.7498 MPZL1,OCLN,CADM1,PTPRF,CD40,ITGAM,CLDN8,SDC2,VCAN,CD2,CD6,SELPLG http://www.broadinstitute.org/gsea/msigdb/cards/KEGG_CELL_ADHESION_MOLECULES_CAMS KEGG_LYSOSOME 121 11 0.05 0.4775 0.7519 AP1G1,IDUA,LAPTM5,ASAH1,MAN2B1,HYAL1,ATP6V1H,CLN5,AP1M1,TCIRG1,ATP6V0A4 http://www.broadinstitute.org/gsea/msigdb/cards/KEGG_LYSOSOME BIOCARTA_COMP_PATHWAY 19 2 0.25 0.5027 0.7641 MASP1,CFD http://www.broadinstitute.org/gsea/msigdb/cards/BIOCARTA_COMP_PATHWAY BIOCARTA_MTA3_PATHWAY 19 2 0.25 0.5027 0.7641 TUBA3C,TUBA1A http://www.broadinstitute.org/gsea/msigdb/cards/BIOCARTA_MTA3_PATHWAY BIOCARTA_EPO_PATHWAY 19 2 0.25 0.5027 0.7641 PTPN6,MAPK8 http://www.broadinstitute.org/gsea/msigdb/cards/BIOCARTA_EPO_PATHWAY BIOCARTA_FAS_PATHWAY 30 3 0.18 0.4927 0.7641 LMNB2,MAPK8,PARP1 http://www.broadinstitute.org/gsea/msigdb/cards/BIOCARTA_FAS_PATHWAY BIOCARTA_NFAT_PATHWAY 54 5 0.1 0.4962 0.7641 PRKACB,MAPK8,CALR,PRKAR1A,CALM1 http://www.broadinstitute.org/gsea/msigdb/cards/BIOCARTA_NFAT_PATHWAY KEGG_ERBB_SIGNALING_PATHWAY 87 8 0.06 0.492 0.7641 NRG2,SHC4,BRAF,MAPK8,ERBB2,KRAS,PLCG2,ABL2 http://www.broadinstitute.org/gsea/msigdb/cards/KEGG_ERBB_SIGNALING_PATHWAY KEGG_AMYOTROPHIC_LATERAL_SCLEROSIS_ALS 53 5 0.1 0.4962 0.7641 CAT,RAB5A,BID,DERL1,TNFRSF1A http://www.broadinstitute.org/gsea/msigdb/cards/KEGG_AMYOTROPHIC_LATERAL_SCLEROSIS_ALS BIOCARTA_ACTINY_PATHWAY 20 2 0.18 0.5307 0.7832 ARPC1B,WASL http://www.broadinstitute.org/gsea/msigdb/cards/BIOCARTA_ACTINY_PATHWAY KEGG_LYSINE_DEGRADATION 44 4 0.08 0.5233 0.7832 EHHADH,AASS,HADHA,PLOD3 http://www.broadinstitute.org/gsea/msigdb/cards/KEGG_LYSINE_DEGRADATION KEGG_GLYCOSAMINOGLYCAN_DEGRADATION 21 2 0.18 0.5307 0.7832 HYAL1,IDUA http://www.broadinstitute.org/gsea/msigdb/cards/KEGG_GLYCOSAMINOGLYCAN_DEGRADATION KEGG_SPLICEOSOME 126 10 0 0.5288 0.7832 LSM3,SNRPA,HNRNPK,CDC40,DHX8,CRNKL1,CWC15,PLRG1,HSPA6,PRPF18 http://www.broadinstitute.org/gsea/msigdb/cards/KEGG_SPLICEOSOME KEGG_VASCULAR_SMOOTH_MUSCLE_CONTRACTION 115 10 0 0.5288 0.7832 ADCY3,ADCY7,AGTR1,PRKACB,BRAF,AVPR1B,RHOA,RAMP1,PRKCE,CALM1 http://www.broadinstitute.org/gsea/msigdb/cards/KEGG_VASCULAR_SMOOTH_MUSCLE_CONTRACTION WNT_SIGNALING 89 8 0.03 0.5183 0.7832 CTNNB1,PITX2,LEF1,TLE2,DAAM1,PPP2CA,WNT2B,CSNK1D http://www.broadinstitute.org/gsea/msigdb/cards/WNT_SIGNALING KEGG_ETHER_LIPID_METABOLISM 33 3 0.09 0.537 0.7887 PAFAH2,PAFAH1B2,PPAP2C http://www.broadinstitute.org/gsea/msigdb/cards/KEGG_ETHER_LIPID_METABOLISM KEGG_NUCLEOTIDE_EXCISION_REPAIR 44 4 0.04 0.5419 0.7921 RAD23B,ERCC4,POLD3,MNAT1 http://www.broadinstitute.org/gsea/msigdb/cards/KEGG_NUCLEOTIDE_EXCISION_REPAIR KEGG_HEDGEHOG_SIGNALING_PATHWAY 56 5 0.02 0.5462 0.7946 PRKACB,WNT2B,CSNK1D,PTCH1,BMP5 http://www.broadinstitute.org/gsea/msigdb/cards/KEGG_HEDGEHOG_SIGNALING_PATHWAY BIOCARTA_AT1R_PATHWAY 34 3 0.04 0.5583 0.8045 AGTR1,MAPK8,CALM1 http://www.broadinstitute.org/gsea/msigdb/cards/BIOCARTA_AT1R_PATHWAY BIOCARTA_DEATH_PATHWAY 33 3 0.04 0.5583 0.8045 BID,TNFRSF25,CHUK http://www.broadinstitute.org/gsea/msigdb/cards/BIOCARTA_DEATH_PATHWAY BIOCARTA_BCR_PATHWAY 35 3 0 0.579 0.8175 VAV1,MAPK8,CALM1 http://www.broadinstitute.org/gsea/msigdb/cards/BIOCARTA_BCR_PATHWAY BIOCARTA_CARM_ER_PATHWAY 35 3 0 0.579 0.8175 TBP,HDAC11,PPARGC1A http://www.broadinstitute.org/gsea/msigdb/cards/BIOCARTA_CARM_ER_PATHWAY BIOCARTA_CERAMIDE_PATHWAY 22 2 0.04 0.5834 0.8175 TNFRSF1A,MAPK8 http://www.broadinstitute.org/gsea/msigdb/cards/BIOCARTA_CERAMIDE_PATHWAY BIOCARTA_INSULIN_PATHWAY 22 2 0.04 0.5834 0.8175 SLC2A4,MAPK8 http://www.broadinstitute.org/gsea/msigdb/cards/BIOCARTA_INSULIN_PATHWAY BIOCARTA_GPCR_PATHWAY 35 3 0 0.579 0.8175 PRKACB,PRKAR1A,CALM1 http://www.broadinstitute.org/gsea/msigdb/cards/BIOCARTA_GPCR_PATHWAY KEGG_LEISHMANIA_INFECTION 72 6 -0.04 0.5791 0.8175 TLR2,TGFB1,IRAK1,ITGAM,FCGR1A,PTPN6 http://www.broadinstitute.org/gsea/msigdb/cards/KEGG_LEISHMANIA_INFECTION KEGG_T_CELL_RECEPTOR_SIGNALING_PATHWAY 108 9 -0.07 0.5951 0.8301 CD3G,KRAS,PTPN6,VAV1,ORC3L,RHOA,CHUK,CARD11,LCP2 http://www.broadinstitute.org/gsea/msigdb/cards/KEGG_T_CELL_RECEPTOR_SIGNALING_PATHWAY KEGG_PRIMARY_IMMUNODEFICIENCY 35 3 -0.04 0.5991 0.8319 RAG1,CD40,CD19 http://www.broadinstitute.org/gsea/msigdb/cards/KEGG_PRIMARY_IMMUNODEFICIENCY BIOCARTA_CCR3_PATHWAY 23 2 -0.02 0.608 0.8329 LIMK1,RHOA http://www.broadinstitute.org/gsea/msigdb/cards/BIOCARTA_CCR3_PATHWAY BIOCARTA_IGF1R_PATHWAY 23 2 -0.02 0.608 0.8329 PRKAR1A,PRKACB http://www.broadinstitute.org/gsea/msigdb/cards/BIOCARTA_IGF1R_PATHWAY BIOCARTA_RAC1_PATHWAY 23 2 -0.02 0.608 0.8329 LIMK1,VAV1 http://www.broadinstitute.org/gsea/msigdb/cards/BIOCARTA_RAC1_PATHWAY KEGG_GLYCEROLIPID_METABOLISM 49 4 -0.11 0.6287 0.8574 PPAP2C,DGAT2,GALK2,DGKI http://www.broadinstitute.org/gsea/msigdb/cards/KEGG_GLYCEROLIPID_METABOLISM BIOCARTA_PAR1_PATHWAY 37 3 -0.12 0.6373 0.8653 RHOA,ARHGEF7,ARHGEF19 http://www.broadinstitute.org/gsea/msigdb/cards/BIOCARTA_PAR1_PATHWAY KEGG_APOPTOSIS 88 7 -0.13 0.6437 0.8701 PRKACB,CHUK,IRAK1,BID,TNFRSF1A,ENDOD1,PRKAR1A http://www.broadinstitute.org/gsea/msigdb/cards/KEGG_APOPTOSIS BIOCARTA_FCER1_PATHWAY 39 3 -0.16 0.6555 0.8744 VAV1,MAPK8,CALM1 http://www.broadinstitute.org/gsea/msigdb/cards/BIOCARTA_FCER1_PATHWAY BIOCARTA_INTEGRIN_PATHWAY 38 3 -0.16 0.6555 0.8744 RHOA,ACTN1,MAPK8 http://www.broadinstitute.org/gsea/msigdb/cards/BIOCARTA_INTEGRIN_PATHWAY KEGG_GNRH_SIGNALING_PATHWAY 101 8 -0.14 0.6526 0.8744 ADCY3,ADCY7,PRKACB,MAPK8,MAPK7,KRAS,MMP14,CALM1 http://www.broadinstitute.org/gsea/msigdb/cards/KEGG_GNRH_SIGNALING_PATHWAY BIOCARTA_BCELLSURVIVAL_PATHWAY 16 1 -0.5 0.7678 0.8882 BIRC5 http://www.broadinstitute.org/gsea/msigdb/cards/BIOCARTA_BCELLSURVIVAL_PATHWAY BIOCARTA_BIOPEPTIDES_PATHWAY 43 3 -0.31 0.7214 0.8882 STAT4,MAPK8,CALM1 http://www.broadinstitute.org/gsea/msigdb/cards/BIOCARTA_BIOPEPTIDES_PATHWAY BIOCARTA_HDAC_PATHWAY 30 2 -0.36 0.7327 0.8882 MAPK7,CALM1 http://www.broadinstitute.org/gsea/msigdb/cards/BIOCARTA_HDAC_PATHWAY BIOCARTA_CTL_PATHWAY 15 1 -0.2 0.6947 0.8882 CD3G http://www.broadinstitute.org/gsea/msigdb/cards/BIOCARTA_CTL_PATHWAY BIOCARTA_INFLAM_PATHWAY 29 2 -0.36 0.7327 0.8882 TGFB1,IL6 http://www.broadinstitute.org/gsea/msigdb/cards/BIOCARTA_INFLAM_PATHWAY BIOCARTA_CALCINEURIN_PATHWAY 19 1 -0.67 0.8066 0.8882 CALM1 http://www.broadinstitute.org/gsea/msigdb/cards/BIOCARTA_CALCINEURIN_PATHWAY BIOCARTA_EGF_PATHWAY 31 2 -0.45 0.766 0.8882 STAT4,MAPK8 http://www.broadinstitute.org/gsea/msigdb/cards/BIOCARTA_EGF_PATHWAY BIOCARTA_ERK_PATHWAY 28 2 -0.31 0.7146 0.8882 PPP2CA,PTPRR http://www.broadinstitute.org/gsea/msigdb/cards/BIOCARTA_ERK_PATHWAY BIOCARTA_HIF_PATHWAY 15 1 -0.4 0.7456 0.8882 HSP90AA1 http://www.broadinstitute.org/gsea/msigdb/cards/BIOCARTA_HIF_PATHWAY BIOCARTA_IL3_PATHWAY 15 1 -0.4 0.7456 0.8882 PTPN6 http://www.broadinstitute.org/gsea/msigdb/cards/BIOCARTA_IL3_PATHWAY BIOCARTA_IL7_PATHWAY 17 1 -0.59 0.7881 0.8882 MYO1C http://www.broadinstitute.org/gsea/msigdb/cards/BIOCARTA_IL7_PATHWAY BIOCARTA_RACCYCD_PATHWAY 26 2 -0.2 0.6752 0.8882 RHOA,CHUK http://www.broadinstitute.org/gsea/msigdb/cards/BIOCARTA_RACCYCD_PATHWAY BIOCARTA_PYK2_PATHWAY 29 2 -0.31 0.7146 0.8882 MAPK8,CALM1 http://www.broadinstitute.org/gsea/msigdb/cards/BIOCARTA_PYK2_PATHWAY BIOCARTA_NGF_PATHWAY 18 1 -0.67 0.8066 0.8882 MAPK8 http://www.broadinstitute.org/gsea/msigdb/cards/BIOCARTA_NGF_PATHWAY BIOCARTA_RARRXR_PATHWAY 15 1 -0.4 0.7456 0.8882 TBP http://www.broadinstitute.org/gsea/msigdb/cards/BIOCARTA_RARRXR_PATHWAY BIOCARTA_P53_PATHWAY 16 1 -0.5 0.7678 0.8882 TIMP3 http://www.broadinstitute.org/gsea/msigdb/cards/BIOCARTA_P53_PATHWAY BIOCARTA_PDGF_PATHWAY 32 2 -0.5 0.7813 0.8882 STAT4,MAPK8 http://www.broadinstitute.org/gsea/msigdb/cards/BIOCARTA_PDGF_PATHWAY BIOCARTA_EDG1_PATHWAY 27 2 -0.25 0.6954 0.8882 ASAH1,RHOA http://www.broadinstitute.org/gsea/msigdb/cards/BIOCARTA_EDG1_PATHWAY BIOCARTA_MYOSIN_PATHWAY 31 2 -0.45 0.766 0.8882 ARHGEF7,ARHGEF19 http://www.broadinstitute.org/gsea/msigdb/cards/BIOCARTA_MYOSIN_PATHWAY BIOCARTA_STEM_PATHWAY 15 1 -0.4 0.7456 0.8882 IL6 http://www.broadinstitute.org/gsea/msigdb/cards/BIOCARTA_STEM_PATHWAY BIOCARTA_ERK5_PATHWAY 18 1 -0.67 0.8066 0.8882 MAPK7 http://www.broadinstitute.org/gsea/msigdb/cards/BIOCARTA_ERK5_PATHWAY BIOCARTA_MEF2D_PATHWAY 21 1 -0.67 0.8066 0.8882 CALM1 http://www.broadinstitute.org/gsea/msigdb/cards/BIOCARTA_MEF2D_PATHWAY BIOCARTA_SPRY_PATHWAY 18 1 -0.67 0.8066 0.8882 SPRY2 http://www.broadinstitute.org/gsea/msigdb/cards/BIOCARTA_SPRY_PATHWAY BIOCARTA_HSP27_PATHWAY 15 1 -0.4 0.7456 0.8882 MAPKAPK2 http://www.broadinstitute.org/gsea/msigdb/cards/BIOCARTA_HSP27_PATHWAY BIOCARTA_CTLA4_PATHWAY 21 1 -0.67 0.8066 0.8882 CD3G http://www.broadinstitute.org/gsea/msigdb/cards/BIOCARTA_CTLA4_PATHWAY BIOCARTA_CREB_PATHWAY 27 2 -0.25 0.6954 0.8882 PRKACB,PRKAR1A http://www.broadinstitute.org/gsea/msigdb/cards/BIOCARTA_CREB_PATHWAY BIOCARTA_VEGF_PATHWAY 29 2 -0.36 0.7327 0.8882 EIF1,EIF2S1 http://www.broadinstitute.org/gsea/msigdb/cards/BIOCARTA_VEGF_PATHWAY KEGG_PENTOSE_AND_GLUCURONATE_INTERCONVERSIONS 28 2 -0.25 0.6954 0.8882 CRYL1,DCXR http://www.broadinstitute.org/gsea/msigdb/cards/KEGG_PENTOSE_AND_GLUCURONATE_INTERCONVERSIONS KEGG_OTHER_GLYCAN_DEGRADATION 16 1 -0.5 0.7678 0.8882 MAN2B1 http://www.broadinstitute.org/gsea/msigdb/cards/KEGG_OTHER_GLYCAN_DEGRADATION KEGG_GLYCEROPHOSPHOLIPID_METABOLISM 76 5 -0.39 0.7841 0.8882 PPAP2C,CDS1,CHKA,DGKI,MBOAT7 http://www.broadinstitute.org/gsea/msigdb/cards/KEGG_GLYCEROPHOSPHOLIPID_METABOLISM KEGG_ALPHA_LINOLENIC_ACID_METABOLISM 19 1 -0.67 0.8066 0.8882 ACOX1 http://www.broadinstitute.org/gsea/msigdb/cards/KEGG_ALPHA_LINOLENIC_ACID_METABOLISM KEGG_PANTOTHENATE_AND_COA_BIOSYNTHESIS 16 1 -0.5 0.7678 0.8882 VNN2 http://www.broadinstitute.org/gsea/msigdb/cards/KEGG_PANTOTHENATE_AND_COA_BIOSYNTHESIS KEGG_RETINOL_METABOLISM 64 4 -0.45 0.8007 0.8882 RDH5,DGAT2,CYP2A6,RDH12 http://www.broadinstitute.org/gsea/msigdb/cards/KEGG_RETINOL_METABOLISM KEGG_PORPHYRIN_AND_CHLOROPHYLL_METABOLISM 41 3 -0.23 0.6898 0.8882 ALAS1,HMOX1,FECH http://www.broadinstitute.org/gsea/msigdb/cards/KEGG_PORPHYRIN_AND_CHLOROPHYLL_METABOLISM KEGG_TERPENOID_BACKBONE_BIOSYNTHESIS 15 1 -0.4 0.7456 0.8882 HMGCR http://www.broadinstitute.org/gsea/msigdb/cards/KEGG_TERPENOID_BACKBONE_BIOSYNTHESIS KEGG_PROTEASOME 48 3 -0.37 0.7505 0.8882 PSMB10,PSMB7,PSMD6 http://www.broadinstitute.org/gsea/msigdb/cards/KEGG_PROTEASOME KEGG_NEUROACTIVE_LIGAND_RECEPTOR_INTERACTION 272 20 -0.25 0.8083 0.8882 AGTR1,MC1R,PTH1R,AVPR1B,GHR,GRM3,FPR3,OPRL1,THRB,GABRB1,VIPR1,P2RY6,P2RX7,GPR35,GABRG1,PTGER3,ADRB2,CHRM2,PTAFR,DHX8 http://www.broadinstitute.org/gsea/msigdb/cards/KEGG_NEUROACTIVE_LIGAND_RECEPTOR_INTERACTION KEGG_MTOR_SIGNALING_PATHWAY 52 4 -0.2 0.6754 0.8882 BRAF,PRKAA1,PRKAA2,EIF4E http://www.broadinstitute.org/gsea/msigdb/cards/KEGG_MTOR_SIGNALING_PATHWAY KEGG_VEGF_SIGNALING_PATHWAY 76 5 -0.4 0.7939 0.8882 SH2D2A,MAPKAPK2,KRAS,RAC2,PLCG2 http://www.broadinstitute.org/gsea/msigdb/cards/KEGG_VEGF_SIGNALING_PATHWAY KEGG_COMPLEMENT_AND_COAGULATION_CASCADES 69 5 -0.28 0.7298 0.8882 MASP1,SERPINE1,CFD,PLAUR,PLAU http://www.broadinstitute.org/gsea/msigdb/cards/KEGG_COMPLEMENT_AND_COAGULATION_CASCADES KEGG_RENIN_ANGIOTENSIN_SYSTEM 17 1 -0.59 0.7881 0.8882 AGTR1 http://www.broadinstitute.org/gsea/msigdb/cards/KEGG_RENIN_ANGIOTENSIN_SYSTEM KEGG_NATURAL_KILLER_CELL_MEDIATED_CYTOTOXICITY 137 10 -0.21 0.7154 0.8882 BRAF,KRAS,RAC2,PTPN6,VAV1,ORC3L,PLCG2,SHC4,LCP2,BID http://www.broadinstitute.org/gsea/msigdb/cards/KEGG_NATURAL_KILLER_CELL_MEDIATED_CYTOTOXICITY KEGG_LONG_TERM_DEPRESSION 69 5 -0.26 0.7179 0.8882 GNAZ,PPP2R1B,BRAF,KRAS,PPP2CA http://www.broadinstitute.org/gsea/msigdb/cards/KEGG_LONG_TERM_DEPRESSION KEGG_ALDOSTERONE_REGULATED_SODIUM_REABSORPTION 42 3 -0.31 0.7214 0.8882 KRAS,NEDD4L,HSD11B1 http://www.broadinstitute.org/gsea/msigdb/cards/KEGG_ALDOSTERONE_REGULATED_SODIUM_REABSORPTION KEGG_GLIOMA 65 5 -0.2 0.6797 0.8882 SHC4,BRAF,KRAS,PLCG2,CALM1 http://www.broadinstitute.org/gsea/msigdb/cards/KEGG_GLIOMA KEGG_BASAL_CELL_CARCINOMA 55 4 -0.28 0.7179 0.8882 CTNNB1,LEF1,WNT2B,PTCH1 http://www.broadinstitute.org/gsea/msigdb/cards/KEGG_BASAL_CELL_CARCINOMA KEGG_MELANOMA 71 5 -0.33 0.7526 0.8882 FGF14,FGF13,PDGFD,BRAF,KRAS http://www.broadinstitute.org/gsea/msigdb/cards/KEGG_MELANOMA KEGG_NON_SMALL_CELL_LUNG_CANCER 54 4 -0.25 0.7042 0.8882 BRAF,ERBB2,KRAS,PLCG2 http://www.broadinstitute.org/gsea/msigdb/cards/KEGG_NON_SMALL_CELL_LUNG_CANCER KEGG_ASTHMA 30 2 -0.31 0.7146 0.8882 RNASE3,CD40 http://www.broadinstitute.org/gsea/msigdb/cards/KEGG_ASTHMA KEGG_STARCH_AND_SUCROSE_METABOLISM 52 3 -0.53 0.8125 0.8897 UXS1,G6PC,HK1 http://www.broadinstitute.org/gsea/msigdb/cards/KEGG_STARCH_AND_SUCROSE_METABOLISM BIOCARTA_TID_PATHWAY 19 1 -0.75 0.8235 0.8921 TNFRSF1A http://www.broadinstitute.org/gsea/msigdb/cards/BIOCARTA_TID_PATHWAY BIOCARTA_PROTEASOME_PATHWAY 19 1 -0.75 0.8235 0.8921 PSMB7 http://www.broadinstitute.org/gsea/msigdb/cards/BIOCARTA_PROTEASOME_PATHWAY KEGG_PRION_DISEASES 35 2 -0.63 0.822 0.8921 PRKACB,IL6 http://www.broadinstitute.org/gsea/msigdb/cards/KEGG_PRION_DISEASES BIOCARTA_AMI_PATHWAY 20 1 -0.82 0.8389 0.8965 COL4A3 http://www.broadinstitute.org/gsea/msigdb/cards/BIOCARTA_AMI_PATHWAY BIOCARTA_AGR_PATHWAY 36 2 -0.67 0.8339 0.8965 NRG2,MAPK8 http://www.broadinstitute.org/gsea/msigdb/cards/BIOCARTA_AGR_PATHWAY BIOCARTA_CELLCYCLE_PATHWAY 23 1 -1.02 0.8775 0.8965 CDC2 http://www.broadinstitute.org/gsea/msigdb/cards/BIOCARTA_CELLCYCLE_PATHWAY BIOCARTA_CYTOKINE_PATHWAY 21 1 -0.89 0.8529 0.8965 IL6 http://www.broadinstitute.org/gsea/msigdb/cards/BIOCARTA_CYTOKINE_PATHWAY BIOCARTA_IGF1_PATHWAY 21 1 -0.89 0.8529 0.8965 MAPK8 http://www.broadinstitute.org/gsea/msigdb/cards/BIOCARTA_IGF1_PATHWAY BIOCARTA_GLEEVEC_PATHWAY 23 1 -1.02 0.8775 0.8965 MAPK8 http://www.broadinstitute.org/gsea/msigdb/cards/BIOCARTA_GLEEVEC_PATHWAY BIOCARTA_INTRINSIC_PATHWAY 23 1 -1.02 0.8775 0.8965 COL4A3 http://www.broadinstitute.org/gsea/msigdb/cards/BIOCARTA_INTRINSIC_PATHWAY BIOCARTA_HER2_PATHWAY 22 1 -0.96 0.8658 0.8965 IL6 http://www.broadinstitute.org/gsea/msigdb/cards/BIOCARTA_HER2_PATHWAY BIOCARTA_MITOCHONDRIA_PATHWAY 21 1 -0.89 0.8529 0.8965 BID http://www.broadinstitute.org/gsea/msigdb/cards/BIOCARTA_MITOCHONDRIA_PATHWAY KEGG_STEROID_HORMONE_BIOSYNTHESIS 55 3 -0.67 0.861 0.8965 HSD11B1,CYP1B1,HSD17B12 http://www.broadinstitute.org/gsea/msigdb/cards/KEGG_STEROID_HORMONE_BIOSYNTHESIS KEGG_NICOTINATE_AND_NICOTINAMIDE_METABOLISM 23 1 -1.02 0.8775 0.8965 NNT http://www.broadinstitute.org/gsea/msigdb/cards/KEGG_NICOTINATE_AND_NICOTINAMIDE_METABOLISM KEGG_NITROGEN_METABOLISM 23 1 -1.02 0.8775 0.8965 CA9 http://www.broadinstitute.org/gsea/msigdb/cards/KEGG_NITROGEN_METABOLISM KEGG_LONG_TERM_POTENTIATION 70 4 -0.63 0.87 0.8965 PRKACB,BRAF,KRAS,CALM1 http://www.broadinstitute.org/gsea/msigdb/cards/KEGG_LONG_TERM_POTENTIATION KEGG_PROXIMAL_TUBULE_BICARBONATE_RECLAMATION 23 1 -1.02 0.8775 0.8965 SLC9A3 http://www.broadinstitute.org/gsea/msigdb/cards/KEGG_PROXIMAL_TUBULE_BICARBONATE_RECLAMATION KEGG_RENAL_CELL_CARCINOMA 70 4 -0.63 0.87 0.8965 TGFB1,SLC2A1,BRAF,KRAS http://www.broadinstitute.org/gsea/msigdb/cards/KEGG_RENAL_CELL_CARCINOMA KEGG_SMALL_CELL_LUNG_CANCER 84 5 -0.57 0.8669 0.8965 MAX,CHUK,TRAF5,FN1,ITGA3 http://www.broadinstitute.org/gsea/msigdb/cards/KEGG_SMALL_CELL_LUNG_CANCER KEGG_VIRAL_MYOCARDITIS 73 4 -0.56 0.8469 0.8965 CD40,BID,RAC2,ABL2 http://www.broadinstitute.org/gsea/msigdb/cards/KEGG_VIRAL_MYOCARDITIS BIOCARTA_ECM_PATHWAY 24 1 -1.08 0.8882 0.8985 RHOA http://www.broadinstitute.org/gsea/msigdb/cards/BIOCARTA_ECM_PATHWAY KEGG_DORSO_VENTRAL_AXIS_FORMATION 25 1 -1.08 0.8882 0.8985 KRAS http://www.broadinstitute.org/gsea/msigdb/cards/KEGG_DORSO_VENTRAL_AXIS_FORMATION KEGG_TYPE_I_DIABETES_MELLITUS 44 2 -0.86 0.8835 0.8985 GAD1,CPE http://www.broadinstitute.org/gsea/msigdb/cards/KEGG_TYPE_I_DIABETES_MELLITUS KEGG_GLYCOSAMINOGLYCAN_BIOSYNTHESIS_HEPARAN_SULFATE 26 1 -1.2 0.9069 0.9143 EXTL2 http://www.broadinstitute.org/gsea/msigdb/cards/KEGG_GLYCOSAMINOGLYCAN_BIOSYNTHESIS_HEPARAN_SULFATE KEGG_PENTOSE_PHOSPHATE_PATHWAY 27 1 -1.25 0.915 0.9195 KHSRP http://www.broadinstitute.org/gsea/msigdb/cards/KEGG_PENTOSE_PHOSPHATE_PATHWAY BIOCARTA_SPPA_PATHWAY 22 0 0 1 0.9229 http://www.broadinstitute.org/gsea/msigdb/cards/BIOCARTA_SPPA_PATHWAY BIOCARTA_CDMAC_PATHWAY 16 0 0 1 0.9229 http://www.broadinstitute.org/gsea/msigdb/cards/BIOCARTA_CDMAC_PATHWAY BIOCARTA_CXCR4_PATHWAY 24 0 0 1 0.9229 http://www.broadinstitute.org/gsea/msigdb/cards/BIOCARTA_CXCR4_PATHWAY BIOCARTA_FMLP_PATHWAY 37 1 -1.67 0.9626 0.9229 CALM1 http://www.broadinstitute.org/gsea/msigdb/cards/BIOCARTA_FMLP_PATHWAY BIOCARTA_HCMV_PATHWAY 17 0 0 1 0.9229 http://www.broadinstitute.org/gsea/msigdb/cards/BIOCARTA_HCMV_PATHWAY BIOCARTA_ETS_PATHWAY 18 0 0 1 0.9229 http://www.broadinstitute.org/gsea/msigdb/cards/BIOCARTA_ETS_PATHWAY BIOCARTA_PTEN_PATHWAY 18 0 0 1 0.9229 http://www.broadinstitute.org/gsea/msigdb/cards/BIOCARTA_PTEN_PATHWAY BIOCARTA_ACH_PATHWAY 16 0 0 1 0.9229 http://www.broadinstitute.org/gsea/msigdb/cards/BIOCARTA_ACH_PATHWAY BIOCARTA_BARRESTIN_SRC_PATHWAY 15 0 0 1 0.9229 http://www.broadinstitute.org/gsea/msigdb/cards/BIOCARTA_BARRESTIN_SRC_PATHWAY BIOCARTA_MET_PATHWAY 37 1 -1.71 0.9659 0.9229 MAPK8 http://www.broadinstitute.org/gsea/msigdb/cards/BIOCARTA_MET_PATHWAY BIOCARTA_TPO_PATHWAY 24 0 0 1 0.9229 http://www.broadinstitute.org/gsea/msigdb/cards/BIOCARTA_TPO_PATHWAY BIOCARTA_ARF_PATHWAY 17 0 0 1 0.9229 http://www.broadinstitute.org/gsea/msigdb/cards/BIOCARTA_ARF_PATHWAY KEGG_ASCORBATE_AND_ALDARATE_METABOLISM 25 0 0 1 0.9229 http://www.broadinstitute.org/gsea/msigdb/cards/KEGG_ASCORBATE_AND_ALDARATE_METABOLISM KEGG_O_GLYCAN_BIOSYNTHESIS 30 1 -1.4 0.9354 0.9229 GCNT4 http://www.broadinstitute.org/gsea/msigdb/cards/KEGG_O_GLYCAN_BIOSYNTHESIS KEGG_ARACHIDONIC_ACID_METABOLISM 58 2 -1.31 0.9618 0.9229 PTGDS,EPHX2 http://www.broadinstitute.org/gsea/msigdb/cards/KEGG_ARACHIDONIC_ACID_METABOLISM KEGG_LINOLEIC_ACID_METABOLISM 29 0 0 1 0.9229 http://www.broadinstitute.org/gsea/msigdb/cards/KEGG_LINOLEIC_ACID_METABOLISM KEGG_GLYCOSPHINGOLIPID_BIOSYNTHESIS_GANGLIO_SERIES 15 0 0 1 0.9229 http://www.broadinstitute.org/gsea/msigdb/cards/KEGG_GLYCOSPHINGOLIPID_BIOSYNTHESIS_GANGLIO_SERIES KEGG_RIBOSOME 87 3 -1.34 0.9835 0.9229 RPL14,RPL15,RPS29 http://www.broadinstitute.org/gsea/msigdb/cards/KEGG_RIBOSOME KEGG_NOTCH_SIGNALING_PATHWAY 47 2 -1.05 0.9248 0.9229 DTX4,DLL1 http://www.broadinstitute.org/gsea/msigdb/cards/KEGG_NOTCH_SIGNALING_PATHWAY KEGG_ANTIGEN_PROCESSING_AND_PRESENTATION 89 4 -0.8 0.9221 0.9229 HSP90AA1,IFI30,CALR,HSPA6 http://www.broadinstitute.org/gsea/msigdb/cards/KEGG_ANTIGEN_PROCESSING_AND_PRESENTATION KEGG_OLFACTORY_TRANSDUCTION 389 6 -2.52 1 0.9229 PDE1C,OR52E8,ADCY3,OR52A1,CALM1,PRKACB http://www.broadinstitute.org/gsea/msigdb/cards/KEGG_OLFACTORY_TRANSDUCTION KEGG_TASTE_TRANSDUCTION 52 1 -2.17 0.9905 0.9229 PRKACB http://www.broadinstitute.org/gsea/msigdb/cards/KEGG_TASTE_TRANSDUCTION KEGG_MATURITY_ONSET_DIABETES_OF_THE_YOUNG 25 0 0 1 0.9229 http://www.broadinstitute.org/gsea/msigdb/cards/KEGG_MATURITY_ONSET_DIABETES_OF_THE_YOUNG KEGG_AUTOIMMUNE_THYROID_DISEASE 53 1 -2.11 0.9886 0.9229 CD40 http://www.broadinstitute.org/gsea/msigdb/cards/KEGG_AUTOIMMUNE_THYROID_DISEASE KEGG_SYSTEMIC_LUPUS_ERYTHEMATOSUS 140 7 -0.67 0.9305 0.9229 HIST2H2AA3,H2AFY,H2AFX,ACTN1,CD40,HIST1H2AD,FCGR1A http://www.broadinstitute.org/gsea/msigdb/cards/KEGG_SYSTEMIC_LUPUS_ERYTHEMATOSUS KEGG_ALLOGRAFT_REJECTION 38 1 -1.63 0.9591 0.9229 CD40 http://www.broadinstitute.org/gsea/msigdb/cards/KEGG_ALLOGRAFT_REJECTION KEGG_GRAFT_VERSUS_HOST_DISEASE 42 1 -1.71 0.9659 0.9229 IL6 http://www.broadinstitute.org/gsea/msigdb/cards/KEGG_GRAFT_VERSUS_HOST_DISEASE