HIV-1 Nef: Negative effector of Fas and TNF-alpha Entity Mean Std Dev Mean of Up Perturbations Number of Up Perturbations Mean of Down Perturbations Number of Down Perturbations Number of Total Perturbations BAG4 0.02 0.0 -9999.0 0.0 -9999.0 0.0 0.0 Caspase 8 (4 units) -0.108 0.199 -9999.0 0.0 -0.58 9.0 9.0 NEF -0.035 0.066 -9999.0 0.0 -9999.0 0.0 0.0 NFKBIA -0.037 0.165 -9999.0 0.0 -0.788 3.0 3.0 BIRC3 -0.142 0.347 -9999.0 0.0 -0.699 19.0 19.0 CYCS -0.109 0.301 -9999.0 0.0 -0.719 12.0 12.0 RIPK1 0.02 0.0 -9999.0 0.0 -9999.0 0.0 0.0 CD247 -0.19 0.341 -9999.0 0.0 -0.788 17.0 17.0 MAP2K7 -0.074 0.251 -9999.0 0.0 -0.589 11.0 11.0 protein ubiquitination -0.025 0.233 -9999.0 0.0 -0.543 11.0 11.0 CRADD 0.012 0.064 -9999.0 0.0 -0.523 1.0 1.0 DAXX 0.02 0.0 -9999.0 0.0 -9999.0 0.0 0.0 FAS -0.061 0.229 -9999.0 0.0 -0.708 8.0 8.0 BID -0.087 0.247 -9999.0 0.0 -0.618 10.0 10.0 NF-kappa-B/RelA/I kappa B alpha -0.095 0.172 -9999.0 0.0 -0.658 3.0 3.0 TRADD 0.01 0.085 -9999.0 0.0 -0.708 1.0 1.0 MAP3K5 -0.0 0.12 -9999.0 0.0 -0.708 2.0 2.0 CFLAR -0.01 0.145 -9999.0 0.0 -0.708 3.0 3.0 FADD 0.02 0.0 -9999.0 0.0 -9999.0 0.0 0.0 NF-kappa-B/RelA/I kappa B alpha/ubiquitin -0.095 0.173 -9999.0 0.0 -0.661 3.0 3.0 MAPK8 -0.057 0.232 -9999.0 0.0 -0.535 11.0 11.0 APAF1 0.02 0.0 -9999.0 0.0 -9999.0 0.0 0.0 TRAF1 -0.038 0.194 -9999.0 0.0 -0.677 6.0 6.0 TRAF2 0.005 0.089 -9999.0 0.0 -0.523 2.0 2.0 FAS/FADD/DAXX/Ask1/Caspase 8/Caspase 8/FASLG -0.081 0.207 -9999.0 0.0 -0.546 9.0 9.0 TNFR1A/Caspase 2/TNF-alpha/FADD/TRADD/RIP1/cIAP2/TRAF1/TRAF2/Ask1/RAIDD -0.022 0.214 -9999.0 0.0 -0.651 5.0 5.0 CHUK -0.034 0.259 -9999.0 0.0 -0.612 11.0 11.0 FAS/FADD/DAXX/Ask1/Caspase 8/Caspase 8 0.001 0.147 -9999.0 0.0 -9999.0 0.0 0.0 TCRz/NEF -0.211 0.309 -9999.0 0.0 -0.684 19.0 19.0 TNF 0.002 0.106 -9999.0 0.0 -0.616 2.0 2.0 FASLG -0.266 0.428 -9999.0 0.0 -0.752 28.0 28.0 NFKB1 -0.004 0.05 -9999.0 0.0 -9999.0 0.0 0.0 TNFR1A/BAG4/TNF-alpha -0.024 0.178 -9999.0 0.0 -0.496 8.0 8.0 CASP6 -0.08 0.181 -9999.0 0.0 -0.797 3.0 3.0 CASP7 -0.106 0.327 -9999.0 0.0 -0.693 15.0 15.0 RELA -0.004 0.05 -9999.0 0.0 -9999.0 0.0 0.0 CASP2 0.02 0.0 -9999.0 0.0 -9999.0 0.0 0.0 CASP3 -0.108 0.329 -9999.0 0.0 -0.68 16.0 16.0 TNFRSF1A -0.061 0.229 -9999.0 0.0 -0.708 8.0 8.0 TNFR1A/BAG4 -0.032 0.175 -9999.0 0.0 -0.526 8.0 8.0 CASP8 0.02 0.0 -9999.0 0.0 -9999.0 0.0 0.0 CASP9 0.02 0.0 -9999.0 0.0 -9999.0 0.0 0.0 MAP3K14 -0.057 0.298 -9999.0 0.0 -0.72 11.0 11.0 APAF-1/Caspase 9 -0.164 0.255 -9999.0 0.0 -0.595 17.0 17.0 BCL2 -0.07 0.234 -9999.0 0.0 -0.548 10.0 10.0