Pathway Nof Genes Nof Marker Enrichment P value Q value Marker Genes in Pathway Pathway Info KEGG_RIBOSOME 87 19 1.34 1e-04 0.0186 RPL36AL,RPL14,RPL13,RPS27L,RPL22L1,RPLP1,FAU,RPS18,RPS10,UBA52,RPL35,RPL27A,RPS27,RPL9,RPL10A,RPSA,RPL24,MRPL23,RPL18A http://www.broadinstitute.org/gsea/msigdb/cards/KEGG_RIBOSOME KEGG_MAPK_SIGNALING_PATHWAY 267 41 0.82 1e-04 0.0186 MEF2C,PLA2G2E,CACNB2,KRAS,DUSP14,TAOK3,TGFBR2,FGF6,NFKB1,NFKB2,DAXX,MYC,GADD45G,MAP3K14,MAP3K11,SOS1,GPI,RPS6KA4,DUSP1,RPS6KA1,DUSP6,GNA12,FGF11,TGFB1,RELA,STK4,ARRB1,STMN1,TRAF2,ELK1,CACNA2D1,ATF4,AKT2,TNF,PPM1B,TNFRSF1A,RASGRP4,RASGRP1,MAPK8IP2,MAPK8IP3,MAPK8IP1 http://www.broadinstitute.org/gsea/msigdb/cards/KEGG_MAPK_SIGNALING_PATHWAY BIOCARTA_NTHI_PATHWAY 24 8 1.93 6e-04 0.0515 TNF,IL8,RELA,TGFBR2,NFKB1,EP300,DUSP1,MAP3K14 http://www.broadinstitute.org/gsea/msigdb/cards/BIOCARTA_NTHI_PATHWAY BIOCARTA_PML_PATHWAY 17 6 2.01 0.0021 0.0736 TNF,RB1,DAXX,TNFRSF1A,SUMO1,PRAM1 http://www.broadinstitute.org/gsea/msigdb/cards/BIOCARTA_PML_PATHWAY BIOCARTA_TEL_PATHWAY 18 6 1.93 0.0029 0.0736 XRCC5,RB1,KRAS,TNKS,MYC,TERF1 http://www.broadinstitute.org/gsea/msigdb/cards/BIOCARTA_TEL_PATHWAY BIOCARTA_TNFR2_PATHWAY 18 6 1.93 0.0029 0.0736 TRAF2,RELA,NFKB1,DUSP1,MAP3K14,TNFAIP3 http://www.broadinstitute.org/gsea/msigdb/cards/BIOCARTA_TNFR2_PATHWAY KEGG_AMINO_SUGAR_AND_NUCLEOTIDE_SUGAR_METABOLISM 44 10 1.38 0.0033 0.0736 CYB5R3,GNPNAT1,HK2,NANS,GALE,GALT,GPI,AMDHD2,GFPT1,FUK http://www.broadinstitute.org/gsea/msigdb/cards/KEGG_AMINO_SUGAR_AND_NUCLEOTIDE_SUGAR_METABOLISM KEGG_INSULIN_SIGNALING_PATHWAY 137 22 0.88 0.0029 0.0736 RPS6KB1,PRKAB2,PPP1CC,ELK1,G6PC2,PPP1R3C,PPP1R3B,KRAS,SREBF1,ACACA,EIF4E1B,CBLC,RHOQ,PDPK1,SHC3,AKT2,FLOT2,HK2,SOS1,CALML6,PRKAA2,PIK3R1 http://www.broadinstitute.org/gsea/msigdb/cards/KEGG_INSULIN_SIGNALING_PATHWAY KEGG_ADIPOCYTOKINE_SIGNALING_PATHWAY 67 14 1.26 0.0013 0.0736 NFKB1,AKT2,RELA,PRKAB2,RXRG,ADIPOR2,CD36,TRAF2,TNF,G6PC2,TNFRSF1A,PRKAA2,ACSL3,NPY http://www.broadinstitute.org/gsea/msigdb/cards/KEGG_ADIPOCYTOKINE_SIGNALING_PATHWAY KEGG_PATHWAYS_IN_CANCER 328 43 0.6 0.0026 0.0736 STAT5B,RXRG,CTNNA1,CTNNA3,PIAS3,KRAS,LAMB2,DVL3,TGFBR2,CBLC,FGF6,NFKB1,NFKB2,CCNE1,MYC,AKR1B1,SUFU,SOS1,IL8,FZD3,FZD5,FGF11,TGFB1,WNT2,CDKN2B,RELA,STK4,EP300,TRAF2,ARNT,ITGA2,ITGA3,E2F2,TPR,AKT2,RB1,DAPK3,CDK2,PIK3R1,APC,CEBPA,MSH2,HSP90B1 http://www.broadinstitute.org/gsea/msigdb/cards/KEGG_PATHWAYS_IN_CANCER KEGG_CHRONIC_MYELOID_LEUKEMIA 73 14 1.13 0.0031 0.0736 E2F2,STAT5B,NFKB1,TGFB1,SHC3,MYC,AKT2,RELA,RB1,KRAS,SOS1,PIK3R1,TGFBR2,CBLC http://www.broadinstitute.org/gsea/msigdb/cards/KEGG_CHRONIC_MYELOID_LEUKEMIA KEGG_SMALL_CELL_LUNG_CANCER 84 16 1.12 0.0018 0.0736 E2F2,NFKB1,CCNE1,CDKN2B,MYC,AKT2,RELA,RXRG,RB1,CDK2,PIAS3,TRAF2,LAMB2,PIK3R1,ITGA2,ITGA3 http://www.broadinstitute.org/gsea/msigdb/cards/KEGG_SMALL_CELL_LUNG_CANCER KEGG_PYRUVATE_METABOLISM 40 9 1.36 0.0056 0.115 ME3,ME2,ACAT1,ACSS1,PDHA1,ACACA,AKR1B1,HAGHL,KRT17 http://www.broadinstitute.org/gsea/msigdb/cards/KEGG_PYRUVATE_METABOLISM BIOCARTA_CD40_PATHWAY 15 5 1.93 0.0065 0.1232 RELA,NFKB1,DUSP1,TNFAIP3,MAP3K14 http://www.broadinstitute.org/gsea/msigdb/cards/BIOCARTA_CD40_PATHWAY BIOCARTA_RELA_PATHWAY 16 5 1.84 0.0088 0.1402 TNF,RELA,NFKB1,TNFRSF1A,EP300 http://www.broadinstitute.org/gsea/msigdb/cards/BIOCARTA_RELA_PATHWAY KEGG_T_CELL_RECEPTOR_SIGNALING_PATHWAY 108 17 0.86 0.009 0.1402 RELA,KRAS,VAV3,MALT1,CBLC,NFKB1,PDCD1,PAK6,AKT2,MAP3K14,TNF,RASGRP1,SOS1,NFAT5,PIK3R1,NFATC1,FYN http://www.broadinstitute.org/gsea/msigdb/cards/KEGG_T_CELL_RECEPTOR_SIGNALING_PATHWAY KEGG_PROSTATE_CANCER 89 15 0.95 0.008 0.1402 E2F2,NFKB1,CCNE1,PDPK1,AKT2,AKR1B1,RELA,RB1,CDK2,EP300,KRAS,SOS1,PIK3R1,ATF4,HSP90B1 http://www.broadinstitute.org/gsea/msigdb/cards/KEGG_PROSTATE_CANCER BIOCARTA_CTCF_PATHWAY 23 6 1.58 0.0108 0.1512 TGFBR2,RPS6KB1,GARS,TGFB1,MYC,PIK3R1 http://www.broadinstitute.org/gsea/msigdb/cards/BIOCARTA_CTCF_PATHWAY BIOCARTA_NFKB_PATHWAY 23 6 1.58 0.0108 0.1512 TNF,RELA,NFKB1,TNFRSF1A,MAP3K14,TNFAIP3 http://www.broadinstitute.org/gsea/msigdb/cards/BIOCARTA_NFKB_PATHWAY KEGG_ENDOMETRIAL_CANCER 52 10 1.14 0.0114 0.1513 PDPK1,MYC,AKT2,CTNNA1,CTNNA3,ELK1,KRAS,SOS1,PIK3R1,APC http://www.broadinstitute.org/gsea/msigdb/cards/KEGG_ENDOMETRIAL_CANCER BIOCARTA_KERATINOCYTE_PATHWAY 46 9 1.16 0.0144 0.181 TRAF2,TNF,NFKB1,DAXX,TNFRSF1A,CEBPA,RELA,PRKCD,MAP3K14 http://www.broadinstitute.org/gsea/msigdb/cards/BIOCARTA_KERATINOCYTE_PATHWAY BIOCARTA_TID_PATHWAY 19 5 1.59 0.0189 0.1812 TNF,RELA,NFKB1,RB1,TNFRSF1A http://www.broadinstitute.org/gsea/msigdb/cards/BIOCARTA_TID_PATHWAY BIOCARTA_HIVNEF_PATHWAY 56 10 1.03 0.0189 0.1812 NFKB1,DAXX,RELA,RB1,PRKCD,MAP3K14,TRAF2,TNF,TNFRSF1A,LMNA http://www.broadinstitute.org/gsea/msigdb/cards/BIOCARTA_HIVNEF_PATHWAY BIOCARTA_RACCYCD_PATHWAY 26 6 1.4 0.0199 0.1812 NFKB1,CCNE1,PIK3R1,RELA,RB1,CDK2 http://www.broadinstitute.org/gsea/msigdb/cards/BIOCARTA_RACCYCD_PATHWAY BIOCARTA_MAPK_PATHWAY 87 14 0.88 0.0151 0.1812 MEF2C,NFKB1,RPS6KB1,DAXX,TGFB1,MYC,RELA,MAP3K14,MAP3K11,TRAF2,ELK1,CEBPA,RPS6KA4,RPS6KA1 http://www.broadinstitute.org/gsea/msigdb/cards/BIOCARTA_MAPK_PATHWAY BIOCARTA_PPARA_PATHWAY 58 10 1 0.0212 0.1812 STAT5B,MYC,RELA,RB1,CD36,EP300,TNF,PIK3R1,DUSP1,DUT http://www.broadinstitute.org/gsea/msigdb/cards/BIOCARTA_PPARA_PATHWAY BIOCARTA_TGFB_PATHWAY 19 5 1.59 0.0189 0.1812 SMAD7,TGFBR2,TGFB1,EP300,APC http://www.broadinstitute.org/gsea/msigdb/cards/BIOCARTA_TGFB_PATHWAY BIOCARTA_STRESS_PATHWAY 25 6 1.46 0.0164 0.1812 TRAF2,TNF,NFKB1,TNFRSF1A,RELA,MAP3K14 http://www.broadinstitute.org/gsea/msigdb/cards/BIOCARTA_STRESS_PATHWAY KEGG_GALACTOSE_METABOLISM 26 6 1.4 0.0199 0.1812 HK2,G6PC2,GALE,B4GALT1,GALT,AKR1B1 http://www.broadinstitute.org/gsea/msigdb/cards/KEGG_GALACTOSE_METABOLISM KEGG_RNA_DEGRADATION 55 10 1.06 0.0168 0.1812 LSM6,CNOT6,EXOSC5,EXOSC3,XRN2,DIS3,PAPOLA,DCP1B,DCP2,DCP1A http://www.broadinstitute.org/gsea/msigdb/cards/KEGG_RNA_DEGRADATION KEGG_ACUTE_MYELOID_LEUKEMIA 60 10 1 0.0212 0.1812 STAT5B,RPS6KB1,NFKB1,MYC,AKT2,RELA,KRAS,SOS1,PIK3R1,CEBPA http://www.broadinstitute.org/gsea/msigdb/cards/KEGG_ACUTE_MYELOID_LEUKEMIA BIOCARTA_GSK3_PATHWAY 27 6 1.35 0.0238 0.1852 TIRAP,NFKB1,PDPK1,PIK3R1,APC,RELA http://www.broadinstitute.org/gsea/msigdb/cards/BIOCARTA_GSK3_PATHWAY KEGG_TYROSINE_METABOLISM 42 8 1.12 0.0238 0.1852 TYRP1,ADH1C,COMT,ALDH1A3,GSTZ1,HPD,HYAL1,MAOA http://www.broadinstitute.org/gsea/msigdb/cards/KEGG_TYROSINE_METABOLISM KEGG_ALZHEIMERS_DISEASE 167 21 0.63 0.023 0.1852 IDE,GRIN2A,RYR3,EIF2AK3,NDUFA4L2,NDUFV3,UQCRC1,NDUFS5,ATP5O,NDUFC2,COX4I1,NDUFB5,TNF,ATP5G1,TNFRSF1A,CALML6,NDUFA3,NDUFA8,ITPR1,CAPN1,APBB1 http://www.broadinstitute.org/gsea/msigdb/cards/KEGG_ALZHEIMERS_DISEASE KEGG_TGF_BETA_SIGNALING_PATHWAY 86 13 0.81 0.0275 0.2084 RPS6KB1,TGFB1,ACVR1C,CDKN2B,MYC,PPP2R1A,ROCK1,EP300,TNF,LEFTY2,SMAD7,TGFBR2,GARS http://www.broadinstitute.org/gsea/msigdb/cards/KEGG_TGF_BETA_SIGNALING_PATHWAY KEGG_CHEMOKINE_SIGNALING_PATHWAY 190 24 0.55 0.0287 0.2107 ADCY3,ADCY4,STAT5B,ROCK1,RELA,CCR6,ARRB1,CX3CL1,KRAS,VAV3,GRK6,NFKB1,SHC3,AKT2,PRKCD,ELMO1,GNB2,GNB4,CXCL1,PARD3,CXCL3,SOS1,PIK3R1,IL8 http://www.broadinstitute.org/gsea/msigdb/cards/KEGG_CHEMOKINE_SIGNALING_PATHWAY KEGG_ARGININE_AND_PROLINE_METABOLISM 54 9 0.99 0.0304 0.2141 SLC38A2,P4HA2,OTC,PYCRL,ALDH18A1,CKMT2,ARG2,MAOA,GAMT http://www.broadinstitute.org/gsea/msigdb/cards/KEGG_ARGININE_AND_PROLINE_METABOLISM KEGG_NUCLEOTIDE_EXCISION_REPAIR 44 8 1.06 0.0307 0.2141 RPA1,ERCC8,ERCC4,ERCC2,GTF2H3,GTF2H5,CUL4A,POLD2 http://www.broadinstitute.org/gsea/msigdb/cards/KEGG_NUCLEOTIDE_EXCISION_REPAIR BIOCARTA_TALL1_PATHWAY 15 4 1.61 0.0336 0.2222 TRAF2,RELA,NFKB1,MAP3K14 http://www.broadinstitute.org/gsea/msigdb/cards/BIOCARTA_TALL1_PATHWAY BIOCARTA_TNFR1_PATHWAY 29 6 1.24 0.033 0.2222 TRAF2,TNF,TNFRSF1A,ETFA,LMNA,RB1 http://www.broadinstitute.org/gsea/msigdb/cards/BIOCARTA_TNFR1_PATHWAY KEGG_GLYCOSAMINOGLYCAN_BIOSYNTHESIS_CHONDROITIN_SULFATE 22 5 1.38 0.0347 0.224 B3GAT3,CHPF,CSGALNACT2,CHST13,B4GALT7 http://www.broadinstitute.org/gsea/msigdb/cards/KEGG_GLYCOSAMINOGLYCAN_BIOSYNTHESIS_CHONDROITIN_SULFATE KEGG_NON_SMALL_CELL_LUNG_CANCER 54 9 0.93 0.0377 0.2378 E2F2,PDPK1,AKT2,RXRG,RB1,STK4,KRAS,SOS1,PIK3R1 http://www.broadinstitute.org/gsea/msigdb/cards/KEGG_NON_SMALL_CELL_LUNG_CANCER BIOCARTA_IL2RB_PATHWAY 38 7 1.08 0.0394 0.2425 STAT5B,RPS6KB1,SOS1,MYC,PIK3R1,IKZF3,IL2RA http://www.broadinstitute.org/gsea/msigdb/cards/BIOCARTA_IL2RB_PATHWAY BIOCARTA_CDMAC_PATHWAY 16 4 1.52 0.0418 0.246 TNF,RELA,NFKB1,MYC http://www.broadinstitute.org/gsea/msigdb/cards/BIOCARTA_CDMAC_PATHWAY KEGG_DILATED_CARDIOMYOPATHY 92 13 0.72 0.0415 0.246 ADCY3,ADCY4,TGFB1,SGCD,TNF,CACNB2,TPM4,ACTC1,CACNA2D1,LMNA,ITGA2,ITGA3,PLN http://www.broadinstitute.org/gsea/msigdb/cards/KEGG_DILATED_CARDIOMYOPATHY BIOCARTA_HCMV_PATHWAY 17 4 1.43 0.0511 0.2761 RELA,NFKB1,RB1,PIK3R1 http://www.broadinstitute.org/gsea/msigdb/cards/BIOCARTA_HCMV_PATHWAY BIOCARTA_IL7_PATHWAY 17 4 1.43 0.0511 0.2761 STAT5B,EP300,FYN,PIK3R1 http://www.broadinstitute.org/gsea/msigdb/cards/BIOCARTA_IL7_PATHWAY BIOCARTA_ARF_PATHWAY 17 4 1.43 0.0511 0.2761 POLR1C,RB1,MYC,PIK3R1 http://www.broadinstitute.org/gsea/msigdb/cards/BIOCARTA_ARF_PATHWAY KEGG_HYPERTROPHIC_CARDIOMYOPATHY_HCM 85 12 0.73 0.0485 0.2761 TGFB1,PRKAB2,SGCD,TNF,CACNB2,TPM4,PRKAA2,CACNA2D1,ACTC1,LMNA,ITGA2,ITGA3 http://www.broadinstitute.org/gsea/msigdb/cards/KEGG_HYPERTROPHIC_CARDIOMYOPATHY_HCM KEGG_HEMATOPOIETIC_CELL_LINEAGE 88 12 0.71 0.0524 0.2776 IL4R,CD36,TNF,GP1BB,GP1BA,IL2RA,CD1C,ITGA2,ITGA3,CD1E,CD55,IL5RA http://www.broadinstitute.org/gsea/msigdb/cards/KEGG_HEMATOPOIETIC_CELL_LINEAGE BIOCARTA_DEATH_PATHWAY 33 6 1.06 0.0576 0.2934 TRAF2,TNFRSF25,NFKB1,RELA,LMNA,MAP3K14 http://www.broadinstitute.org/gsea/msigdb/cards/BIOCARTA_DEATH_PATHWAY KEGG_BASE_EXCISION_REPAIR 35 6 1.06 0.0576 0.2934 XRCC1,NTHL1,MBD4,MPG,POLD2,OGG1 http://www.broadinstitute.org/gsea/msigdb/cards/KEGG_BASE_EXCISION_REPAIR KEGG_OXIDATIVE_PHOSPHORYLATION 133 15 0.59 0.0606 0.3012 NDUFA4L2,PPA2,NDUFV3,COX11,UQCRC1,NDUFS5,ATP5O,NDUFC2,COX4I1,NDUFB5,ATP5G1,NDUFA3,NDUFA8,ATP6V1E1,ATP6V0A2 http://www.broadinstitute.org/gsea/msigdb/cards/KEGG_OXIDATIVE_PHOSPHORYLATION KEGG_PHENYLALANINE_METABOLISM 18 4 1.35 0.0614 0.3012 HYAL1,MAOA,ALDH1A3,HPD http://www.broadinstitute.org/gsea/msigdb/cards/KEGG_PHENYLALANINE_METABOLISM KEGG_ERBB_SIGNALING_PATHWAY 87 12 0.66 0.0653 0.3144 STAT5B,RPS6KB1,PAK6,SHC3,NRG1,MYC,AKT2,ELK1,KRAS,SOS1,PIK3R1,CBLC http://www.broadinstitute.org/gsea/msigdb/cards/KEGG_ERBB_SIGNALING_PATHWAY KEGG_METABOLISM_OF_XENOBIOTICS_BY_CYTOCHROME_P450 70 10 0.73 0.0669 0.3164 CYP3A5,ADH1C,GSTZ1,GSTT1,DHDH,ALDH1A3,GSTA2,GSTA5,CYP2C8,EPHX1 http://www.broadinstitute.org/gsea/msigdb/cards/KEGG_METABOLISM_OF_XENOBIOTICS_BY_CYTOCHROME_P450 BIOCARTA_PROTEASOME_PATHWAY 19 4 1.27 0.0728 0.3265 UBE2A,PSMB4,PSMB3,PSMA3 http://www.broadinstitute.org/gsea/msigdb/cards/BIOCARTA_PROTEASOME_PATHWAY KEGG_MTOR_SIGNALING_PATHWAY 52 8 0.82 0.072 0.3265 RPS6KB1,PDPK1,AKT2,CAB39L,PRKAA2,PIK3R1,EIF4E1B,RPS6KA1 http://www.broadinstitute.org/gsea/msigdb/cards/KEGG_MTOR_SIGNALING_PATHWAY KEGG_PANCREATIC_CANCER 70 10 0.71 0.0724 0.3265 E2F2,NFKB1,TGFB1,AKT2,ARHGEF6,RELA,RB1,KRAS,PIK3R1,TGFBR2 http://www.broadinstitute.org/gsea/msigdb/cards/KEGG_PANCREATIC_CANCER BIOCARTA_TCR_PATHWAY 47 7 0.86 0.0771 0.337 ELK1,NFKB1,SOS1,PIK3R1,NFATC1,RELA,FYN http://www.broadinstitute.org/gsea/msigdb/cards/BIOCARTA_TCR_PATHWAY KEGG_DRUG_METABOLISM_CYTOCHROME_P450 72 10 0.69 0.0782 0.337 CYP3A5,ADH1C,GSTZ1,GSTT1,CYP2A13,ALDH1A3,GSTA2,GSTA5,MAOA,CYP2C8 http://www.broadinstitute.org/gsea/msigdb/cards/KEGG_DRUG_METABOLISM_CYTOCHROME_P450 KEGG_NOD_LIKE_RECEPTOR_SIGNALING_PATHWAY 62 9 0.73 0.0789 0.337 NFKB1,NOD1,RELA,CARD18,TNFAIP3,CXCL1,TNF,IL8,HSP90B1 http://www.broadinstitute.org/gsea/msigdb/cards/KEGG_NOD_LIKE_RECEPTOR_SIGNALING_PATHWAY BIOCARTA_G1_PATHWAY 28 5 1.03 0.0851 0.3499 TGFB1,CCNE1,CDKN2B,RB1,CDK2 http://www.broadinstitute.org/gsea/msigdb/cards/BIOCARTA_G1_PATHWAY KEGG_PARKINSONS_DISEASE 130 14 0.54 0.0847 0.3499 HTRA2,UBE2J1,NDUFA4L2,NDUFV3,UQCRC1,UCHL1,NDUFS5,ATP5O,NDUFC2,COX4I1,NDUFB5,ATP5G1,NDUFA3,NDUFA8 http://www.broadinstitute.org/gsea/msigdb/cards/KEGG_PARKINSONS_DISEASE KEGG_VIBRIO_CHOLERAE_INFECTION 56 8 0.76 0.0859 0.3499 ADCY3,KCNQ1,SEC61B,SEC61G,SEC61A2,SLC12A2,ATP6V1E1,ATP6V0A2 http://www.broadinstitute.org/gsea/msigdb/cards/KEGG_VIBRIO_CHOLERAE_INFECTION BIOCARTA_PAR1_PATHWAY 37 6 0.89 0.091 0.3594 PPP1R12B,GNA12,PIK3R1,ROCK1,ARHGEF6,ARHGEF18 http://www.broadinstitute.org/gsea/msigdb/cards/BIOCARTA_PAR1_PATHWAY KEGG_ADHERENS_JUNCTION 75 10 0.65 0.0905 0.3594 CSNK2A2,ACTN4,CTNNA1,CTNNA3,EP300,PARD3,PVRL4,GPI,TGFBR2,FYN http://www.broadinstitute.org/gsea/msigdb/cards/KEGG_ADHERENS_JUNCTION BIOCARTA_ATRBRCA_PATHWAY 21 4 1.12 0.0983 0.37 ERCC4,FANCE,RAD17,FANCC http://www.broadinstitute.org/gsea/msigdb/cards/BIOCARTA_ATRBRCA_PATHWAY KEGG_SPLICEOSOME 126 14 0.5 0.1002 0.37 NCBP1,LSM6,SNRPD3,PQBP1,SNRPA1,EFTUD2,HNRNPU,HNRNPC,PRPF40B,BUD31,SR140,WBP11,SF3B3,SF3B1 http://www.broadinstitute.org/gsea/msigdb/cards/KEGG_SPLICEOSOME KEGG_SNARE_INTERACTIONS_IN_VESICULAR_TRANSPORT 38 6 0.85 0.1006 0.37 SNAP29,USE1,STX16,STX6,GOSR2,GOSR1 http://www.broadinstitute.org/gsea/msigdb/cards/KEGG_SNARE_INTERACTIONS_IN_VESICULAR_TRANSPORT KEGG_VASCULAR_SMOOTH_MUSCLE_CONTRACTION 115 14 0.5 0.1002 0.37 ADCY3,ADCY4,GNA12,ROCK1,PPP1CC,PLA2G2E,ADORA2A,RAMP1,PRKCD,PPP1R12B,CYP4A22,CALML6,ITPR1,CYP4A11 http://www.broadinstitute.org/gsea/msigdb/cards/KEGG_VASCULAR_SMOOTH_MUSCLE_CONTRACTION KEGG_ARRHYTHMOGENIC_RIGHT_VENTRICULAR_CARDIOMYOPATHY_ARVC 76 10 0.63 0.097 0.37 ACTN4,CTNNA1,CTNNA3,SGCD,CACNB2,CACNA2D1,LMNA,ITGA2,ITGA3,DSG2 http://www.broadinstitute.org/gsea/msigdb/cards/KEGG_ARRHYTHMOGENIC_RIGHT_VENTRICULAR_CARDIOMYOPATHY_ARVC BIOCARTA_AKT_PATHWAY 22 4 1.06 0.1124 0.3748 RELA,NFKB1,PDPK1,PIK3R1 http://www.broadinstitute.org/gsea/msigdb/cards/BIOCARTA_AKT_PATHWAY BIOCARTA_CERAMIDE_PATHWAY 22 4 1.06 0.1124 0.3748 TRAF2,RELA,NFKB1,TNFRSF1A http://www.broadinstitute.org/gsea/msigdb/cards/BIOCARTA_CERAMIDE_PATHWAY BIOCARTA_CELLCYCLE_PATHWAY 23 4 0.99 0.1274 0.3748 RB1,CDK2,CCNE1,CDKN2B http://www.broadinstitute.org/gsea/msigdb/cards/BIOCARTA_CELLCYCLE_PATHWAY BIOCARTA_IL2_PATHWAY 22 4 1.06 0.1124 0.3748 IL2RA,STAT5B,ELK1,SOS1 http://www.broadinstitute.org/gsea/msigdb/cards/BIOCARTA_IL2_PATHWAY BIOCARTA_GLEEVEC_PATHWAY 23 4 0.99 0.1274 0.3748 STAT5B,SOS1,MYC,PIK3R1 http://www.broadinstitute.org/gsea/msigdb/cards/BIOCARTA_GLEEVEC_PATHWAY BIOCARTA_P38MAPK_PATHWAY 40 6 0.78 0.1215 0.3748 MEF2C,TRAF2,ELK1,DAXX,TGFB1,MYC http://www.broadinstitute.org/gsea/msigdb/cards/BIOCARTA_P38MAPK_PATHWAY BIOCARTA_MYOSIN_PATHWAY 31 5 0.88 0.1197 0.3748 PPP1R12B,GNA12,ROCK1,ARHGEF18,ARHGEF6 http://www.broadinstitute.org/gsea/msigdb/cards/BIOCARTA_MYOSIN_PATHWAY BIOCARTA_RAS_PATHWAY 23 4 0.99 0.1274 0.3748 RELA,ELK1,NFKB1,PIK3R1 http://www.broadinstitute.org/gsea/msigdb/cards/BIOCARTA_RAS_PATHWAY BIOCARTA_HER2_PATHWAY 22 4 1.06 0.1124 0.3748 ESR1,EP300,SOS1,PIK3R1 http://www.broadinstitute.org/gsea/msigdb/cards/BIOCARTA_HER2_PATHWAY KEGG_PURINE_METABOLISM 158 18 0.38 0.1267 0.3748 ADCY3,ADCY4,NT5C2,NUDT5,NME7,ENTPD6,POLD2,PDE10A,POLR1C,ADK,PDE9A,AK3L1,PFAS,POLR2B,PDE1C,POLR3B,AMPD1,PDE2A http://www.broadinstitute.org/gsea/msigdb/cards/KEGG_PURINE_METABOLISM KEGG_GLYCOSAMINOGLYCAN_BIOSYNTHESIS_KERATAN_SULFATE 15 3 1.29 0.111 0.3748 B4GALT1,CHST4,B4GALT4 http://www.broadinstitute.org/gsea/msigdb/cards/KEGG_GLYCOSAMINOGLYCAN_BIOSYNTHESIS_KERATAN_SULFATE KEGG_GLYCEROLIPID_METABOLISM 49 7 0.71 0.1205 0.3748 AGPAT3,DGKG,PPAP2A,CEL,AKR1B1,MBOAT1,LIPC http://www.broadinstitute.org/gsea/msigdb/cards/KEGG_GLYCEROLIPID_METABOLISM KEGG_NICOTINATE_AND_NICOTINAMIDE_METABOLISM 23 4 0.99 0.1274 0.3748 NMNAT3,BST1,NT5C2,NMNAT1 http://www.broadinstitute.org/gsea/msigdb/cards/KEGG_NICOTINATE_AND_NICOTINAMIDE_METABOLISM KEGG_PROTEIN_EXPORT 24 4 0.99 0.1274 0.3748 SEC61B,SPCS1,SEC61G,SEC61A2 http://www.broadinstitute.org/gsea/msigdb/cards/KEGG_PROTEIN_EXPORT KEGG_MISMATCH_REPAIR 23 4 0.99 0.1274 0.3748 MSH2,MLH3,RPA1,POLD2 http://www.broadinstitute.org/gsea/msigdb/cards/KEGG_MISMATCH_REPAIR KEGG_PEROXISOME 78 10 0.55 0.126 0.3748 PEX6,PMVK,PRDX1,PEX7,PXMP3,HMGCL,DHRS4,IDH2,ABCD4,ACSL3 http://www.broadinstitute.org/gsea/msigdb/cards/KEGG_PEROXISOME KEGG_APOPTOSIS 88 11 0.53 0.1208 0.3748 NFKB1,AKT2,RELA,MAP3K14,TRAF2,TNF,TNFRSF1A,PIK3R1,ENDOD1,CAPN1,ENDOG http://www.broadinstitute.org/gsea/msigdb/cards/KEGG_APOPTOSIS KEGG_B_CELL_RECEPTOR_SIGNALING_PATHWAY 75 10 0.61 0.1039 0.3748 NFKB1,AKT2,RELA,KRAS,SOS1,NFAT5,PIK3R1,NFATC1,VAV3,MALT1 http://www.broadinstitute.org/gsea/msigdb/cards/KEGG_B_CELL_RECEPTOR_SIGNALING_PATHWAY BIOCARTA_PITX2_PATHWAY 15 3 1.19 0.1304 0.3753 TRRAP,EP300,APC http://www.broadinstitute.org/gsea/msigdb/cards/BIOCARTA_PITX2_PATHWAY KEGG_TERPENOID_BACKBONE_BIOSYNTHESIS 15 3 1.19 0.1304 0.3753 MVD,PMVK,ACAT1 http://www.broadinstitute.org/gsea/msigdb/cards/KEGG_TERPENOID_BACKBONE_BIOSYNTHESIS WNT_SIGNALING 89 11 0.5 0.1355 0.3859 WNT2,AES,MYC,PPP2R1A,SUMO1,EP300,APC,GPI,FZD3,FZD5,FRZB http://www.broadinstitute.org/gsea/msigdb/cards/WNT_SIGNALING KEGG_WNT_SIGNALING_PATHWAY 151 17 0.37 0.1393 0.3899 PPP2R5A,WNT2,CSNK2A2,ROCK1,EP300,DVL3,SFRP5,MYC,PPP2R1A,SUMO1,NFAT5,APC,NFATC1,GPI,FZD3,FZD5,CSNK1E http://www.broadinstitute.org/gsea/msigdb/cards/KEGG_WNT_SIGNALING_PATHWAY KEGG_LONG_TERM_POTENTIATION 70 9 0.56 0.1399 0.3899 PPP1R1A,GRIN2A,PPP1CC,EP300,KRAS,CALML6,ITPR1,ATF4,RPS6KA1 http://www.broadinstitute.org/gsea/msigdb/cards/KEGG_LONG_TERM_POTENTIATION KEGG_BLADDER_CANCER 42 6 0.71 0.1443 0.3981 E2F2,KRAS,MYC,IL8,RB1,DAPK3 http://www.broadinstitute.org/gsea/msigdb/cards/KEGG_BLADDER_CANCER BIOCARTA_IL1R_PATHWAY 33 5 0.79 0.1459 0.3982 TNF,NFKB1,TGFB1,RELA,MAP3K14 http://www.broadinstitute.org/gsea/msigdb/cards/BIOCARTA_IL1R_PATHWAY BIOCARTA_P53_PATHWAY 16 3 1.1 0.1508 0.3994 RB1,CDK2,CCNE1 http://www.broadinstitute.org/gsea/msigdb/cards/BIOCARTA_P53_PATHWAY BIOCARTA_SHH_PATHWAY 16 3 1.1 0.1508 0.3994 SUFU,DYRK1B,DYRK1A http://www.broadinstitute.org/gsea/msigdb/cards/BIOCARTA_SHH_PATHWAY KEGG_STEROID_BIOSYNTHESIS 17 3 1.1 0.1508 0.3994 CEL,CYP51A1,FDFT1 http://www.broadinstitute.org/gsea/msigdb/cards/KEGG_STEROID_BIOSYNTHESIS KEGG_LYSINE_DEGRADATION 44 6 0.67 0.1564 0.402 ACAT1,BBOX1,EHMT1,WHSC1L1,SETD2,SUV420H1 http://www.broadinstitute.org/gsea/msigdb/cards/KEGG_LYSINE_DEGRADATION KEGG_RETINOL_METABOLISM 64 8 0.56 0.1557 0.402 CYP3A5,ADH1C,LRAT,DHRS4,CYP2A13,CYP4A22,CYP2C8,CYP4A11 http://www.broadinstitute.org/gsea/msigdb/cards/KEGG_RETINOL_METABOLISM KEGG_OOCYTE_MEIOSIS 114 13 0.41 0.1579 0.402 ADCY3,ADCY4,PPP2R5A,PPP1CC,ANAPC11,CCNE1,FYN,PPP2R1A,AKR1B1,CDK2,CALML6,ITPR1,RPS6KA1 http://www.broadinstitute.org/gsea/msigdb/cards/KEGG_OOCYTE_MEIOSIS KEGG_COLORECTAL_CANCER 62 8 0.56 0.1557 0.402 TGFB1,MYC,AKT2,KRAS,PIK3R1,APC,MSH2,TGFBR2 http://www.broadinstitute.org/gsea/msigdb/cards/KEGG_COLORECTAL_CANCER BIOCARTA_VIP_PATHWAY 27 4 0.82 0.1768 0.427 NFKB1,MYC,NFATC1,RELA http://www.broadinstitute.org/gsea/msigdb/cards/BIOCARTA_VIP_PATHWAY BIOCARTA_41BB_PATHWAY 17 3 1.01 0.1722 0.427 TRAF2,RELA,NFKB1 http://www.broadinstitute.org/gsea/msigdb/cards/BIOCARTA_41BB_PATHWAY KEGG_GLYCEROPHOSPHOLIPID_METABOLISM 76 9 0.48 0.1774 0.427 PHOSPHO1,AGPAT3,PTDSS2,SFI1,PLA2G2E,DGKG,PPAP2A,PLA2G15,MBOAT1 http://www.broadinstitute.org/gsea/msigdb/cards/KEGG_GLYCEROPHOSPHOLIPID_METABOLISM KEGG_BASAL_TRANSCRIPTION_FACTORS 36 5 0.71 0.1742 0.427 STON1,TAF5L,TAF1,GTF2H3,GTF2F2 http://www.broadinstitute.org/gsea/msigdb/cards/KEGG_BASAL_TRANSCRIPTION_FACTORS KEGG_RENIN_ANGIOTENSIN_SYSTEM 17 3 1.01 0.1722 0.427 THOP1,CPA3,NLN http://www.broadinstitute.org/gsea/msigdb/cards/KEGG_RENIN_ANGIOTENSIN_SYSTEM KEGG_PRION_DISEASES 35 5 0.71 0.1742 0.427 C9,ELK1,C8G,NOTCH1,FYN http://www.broadinstitute.org/gsea/msigdb/cards/KEGG_PRION_DISEASES BIOCARTA_NGF_PATHWAY 18 3 0.93 0.1944 0.4436 ELK1,SOS1,PIK3R1 http://www.broadinstitute.org/gsea/msigdb/cards/BIOCARTA_NGF_PATHWAY BIOCARTA_PTEN_PATHWAY 18 3 0.93 0.1944 0.4436 PDPK1,SOS1,PIK3R1 http://www.broadinstitute.org/gsea/msigdb/cards/BIOCARTA_PTEN_PATHWAY BIOCARTA_CARDIACEGF_PATHWAY 18 3 0.93 0.1944 0.4436 RELA,NFKB1,MYC http://www.broadinstitute.org/gsea/msigdb/cards/BIOCARTA_CARDIACEGF_PATHWAY BIOCARTA_ERK5_PATHWAY 18 3 0.93 0.1944 0.4436 MEF2C,RPS6KA1,PIK3R1 http://www.broadinstitute.org/gsea/msigdb/cards/BIOCARTA_ERK5_PATHWAY KEGG_AXON_GUIDANCE 129 14 0.33 0.1939 0.4436 L1CAM,UNC5B,ROCK1,EFNB1,EPHB6,KRAS,EPHA2,EPHA3,EPHA6,PAK6,NFAT5,NFATC1,NGEF,FYN http://www.broadinstitute.org/gsea/msigdb/cards/KEGG_AXON_GUIDANCE KEGG_GLIOMA 65 8 0.49 0.1873 0.4436 E2F2,SHC3,AKT2,RB1,KRAS,SOS1,CALML6,PIK3R1 http://www.broadinstitute.org/gsea/msigdb/cards/KEGG_GLIOMA BIOCARTA_ALK_PATHWAY 37 5 0.63 0.2045 0.4577 MEF2C,TGFB1,APC,TGFBR2,GARS http://www.broadinstitute.org/gsea/msigdb/cards/BIOCARTA_ALK_PATHWAY BIOCARTA_GCR_PATHWAY 20 3 0.85 0.2172 0.4577 RELA,NFKB1,PIK3R1 http://www.broadinstitute.org/gsea/msigdb/cards/BIOCARTA_GCR_PATHWAY BIOCARTA_EPO_PATHWAY 19 3 0.85 0.2172 0.4577 STAT5B,ELK1,SOS1 http://www.broadinstitute.org/gsea/msigdb/cards/BIOCARTA_EPO_PATHWAY BIOCARTA_ERK_PATHWAY 28 4 0.71 0.2127 0.4577 ELK1,SOS1,MYC,RPS6KA1 http://www.broadinstitute.org/gsea/msigdb/cards/BIOCARTA_ERK_PATHWAY BIOCARTA_GH_PATHWAY 28 4 0.71 0.2127 0.4577 STAT5B,SOS1,PIK3R1,RPS6KA1 http://www.broadinstitute.org/gsea/msigdb/cards/BIOCARTA_GH_PATHWAY BIOCARTA_INTEGRIN_PATHWAY 38 5 0.59 0.2202 0.4577 PPP1R12B,SOS1,ROCK1,CAPN1,FYN http://www.broadinstitute.org/gsea/msigdb/cards/BIOCARTA_INTEGRIN_PATHWAY BIOCARTA_TOB1_PATHWAY 21 3 0.85 0.2172 0.4577 IL2RA,TGFBR2,TGFB1 http://www.broadinstitute.org/gsea/msigdb/cards/BIOCARTA_TOB1_PATHWAY BIOCARTA_TOLL_PATHWAY 37 5 0.63 0.2045 0.4577 TIRAP,ELK1,NFKB1,RELA,MAP3K14 http://www.broadinstitute.org/gsea/msigdb/cards/BIOCARTA_TOLL_PATHWAY KEGG_HOMOLOGOUS_RECOMBINATION 28 4 0.71 0.2127 0.4577 RPA1,RAD51L1,MUS81,POLD2 http://www.broadinstitute.org/gsea/msigdb/cards/KEGG_HOMOLOGOUS_RECOMBINATION KEGG_FC_EPSILON_RI_SIGNALING_PATHWAY 79 9 0.4 0.2189 0.4577 AKT2,PRKCD,PLA2G2E,TNF,KRAS,SOS1,PIK3R1,VAV3,FYN http://www.broadinstitute.org/gsea/msigdb/cards/KEGG_FC_EPSILON_RI_SIGNALING_PATHWAY KEGG_TYPE_II_DIABETES_MELLITUS 47 6 0.55 0.2088 0.4577 TNF,HK2,PDX1,KCNJ11,PIK3R1,PRKCD http://www.broadinstitute.org/gsea/msigdb/cards/KEGG_TYPE_II_DIABETES_MELLITUS KEGG_EPITHELIAL_CELL_SIGNALING_IN_HELICOBACTER_PYLORI_INFECTION 68 8 0.43 0.2213 0.4577 NFKB1,NOD1,RELA,MAP3K14,CXCL1,IL8,ATP6V1E1,ATP6V0A2 http://www.broadinstitute.org/gsea/msigdb/cards/KEGG_EPITHELIAL_CELL_SIGNALING_IN_HELICOBACTER_PYLORI_INFECTION KEGG_PPAR_SIGNALING_PATHWAY 69 8 0.41 0.2331 0.4747 AQP7,PDPK1,RXRG,CD36,CYP4A22,ACSL3,PLTP,CYP4A11 http://www.broadinstitute.org/gsea/msigdb/cards/KEGG_PPAR_SIGNALING_PATHWAY KEGG_THYROID_CANCER 29 4 0.66 0.2314 0.4747 KRAS,TPR,MYC,RXRG http://www.broadinstitute.org/gsea/msigdb/cards/KEGG_THYROID_CANCER BIOCARTA_ATM_PATHWAY 20 3 0.78 0.2405 0.4752 RELA,NFKB1,RBBP8 http://www.broadinstitute.org/gsea/msigdb/cards/BIOCARTA_ATM_PATHWAY BIOCARTA_IGF1MTOR_PATHWAY 20 3 0.78 0.2405 0.4752 RPS6KB1,PDPK1,PIK3R1 http://www.broadinstitute.org/gsea/msigdb/cards/BIOCARTA_IGF1MTOR_PATHWAY KEGG_GLUTATHIONE_METABOLISM 50 6 0.49 0.2371 0.4752 GPX7,GSTZ1,GSTT1,IDH2,GSTA2,GSTA5 http://www.broadinstitute.org/gsea/msigdb/cards/KEGG_GLUTATHIONE_METABOLISM KEGG_GLYCOSAMINOGLYCAN_DEGRADATION 21 3 0.78 0.2405 0.4752 ARSB,HYAL1,HPSE2 http://www.broadinstitute.org/gsea/msigdb/cards/KEGG_GLYCOSAMINOGLYCAN_DEGRADATION KEGG_UBIQUITIN_MEDIATED_PROTEOLYSIS 137 14 0.27 0.2434 0.4772 CUL5,UBE2J1,PIAS3,UBR5,ANAPC11,FBXW7,CBLC,RNF7,UBE2A,NHLRC1,ERCC8,BIRC6,MID1,CUL4A http://www.broadinstitute.org/gsea/msigdb/cards/KEGG_UBIQUITIN_MEDIATED_PROTEOLYSIS KEGG_RENAL_CELL_CARCINOMA 70 8 0.39 0.2451 0.4772 TGFB1,PAK6,AKT2,EP300,ARNT,KRAS,SOS1,PIK3R1 http://www.broadinstitute.org/gsea/msigdb/cards/KEGG_RENAL_CELL_CARCINOMA KEGG_CITRATE_CYCLE_TCA_CYCLE 32 4 0.61 0.2504 0.4839 IDH2,PDHA1,SUCLG2,KRT17 http://www.broadinstitute.org/gsea/msigdb/cards/KEGG_CITRATE_CYCLE_TCA_CYCLE KEGG_SPHINGOLIPID_METABOLISM 40 5 0.52 0.2527 0.4848 SGPP1,PPAP2A,ARSA,SMPD2,DEGS1 http://www.broadinstitute.org/gsea/msigdb/cards/KEGG_SPHINGOLIPID_METABOLISM BIOCARTA_EGF_PATHWAY 31 4 0.56 0.2698 0.488 STAT5B,ELK1,SOS1,PIK3R1 http://www.broadinstitute.org/gsea/msigdb/cards/BIOCARTA_EGF_PATHWAY BIOCARTA_P53HYPOXIA_PATHWAY 22 3 0.64 0.2881 0.488 TAF1,RPA1,EP300 http://www.broadinstitute.org/gsea/msigdb/cards/BIOCARTA_P53HYPOXIA_PATHWAY BIOCARTA_IGF1_PATHWAY 21 3 0.71 0.2642 0.488 ELK1,SOS1,PIK3R1 http://www.broadinstitute.org/gsea/msigdb/cards/BIOCARTA_IGF1_PATHWAY BIOCARTA_IL6_PATHWAY 22 3 0.64 0.2881 0.488 CEBPB,ELK1,SOS1 http://www.broadinstitute.org/gsea/msigdb/cards/BIOCARTA_IL6_PATHWAY BIOCARTA_INSULIN_PATHWAY 22 3 0.64 0.2881 0.488 ELK1,SOS1,PIK3R1 http://www.broadinstitute.org/gsea/msigdb/cards/BIOCARTA_INSULIN_PATHWAY BIOCARTA_PDGF_PATHWAY 32 4 0.52 0.2894 0.488 STAT5B,ELK1,SOS1,PIK3R1 http://www.broadinstitute.org/gsea/msigdb/cards/BIOCARTA_PDGF_PATHWAY BIOCARTA_CHREBP2_PATHWAY 44 5 0.45 0.2862 0.488 PPP2R5A,PRKAA2,PPP2R1A,PRKAB2,ACACA http://www.broadinstitute.org/gsea/msigdb/cards/BIOCARTA_CHREBP2_PATHWAY BIOCARTA_RHO_PATHWAY 32 4 0.52 0.2894 0.488 PPP1R12B,PIP5K1A,ACTR2,ROCK1 http://www.broadinstitute.org/gsea/msigdb/cards/BIOCARTA_RHO_PATHWAY KEGG_GLYCOLYSIS_GLUCONEOGENESIS 62 7 0.37 0.2757 0.488 ADH1C,ACSS1,PDHA1,HK2,G6PC2,ALDH1A3,GPI http://www.broadinstitute.org/gsea/msigdb/cards/KEGG_GLYCOLYSIS_GLUCONEOGENESIS KEGG_FATTY_ACID_METABOLISM 42 5 0.48 0.2694 0.488 ADH1C,ACAT1,CYP4A22,ACSL3,CYP4A11 http://www.broadinstitute.org/gsea/msigdb/cards/KEGG_FATTY_ACID_METABOLISM KEGG_ALANINE_ASPARTATE_AND_GLUTAMATE_METABOLISM 32 4 0.56 0.2698 0.488 ASNS,ASPA,GFPT1,AGXT2 http://www.broadinstitute.org/gsea/msigdb/cards/KEGG_ALANINE_ASPARTATE_AND_GLUTAMATE_METABOLISM KEGG_GLYCINE_SERINE_AND_THREONINE_METABOLISM 31 4 0.56 0.2698 0.488 GNMT,MAOA,AGXT2,GAMT http://www.broadinstitute.org/gsea/msigdb/cards/KEGG_GLYCINE_SERINE_AND_THREONINE_METABOLISM KEGG_PROPANOATE_METABOLISM 33 4 0.52 0.2894 0.488 ACAT1,ACSS1,SUCLG2,ACACA http://www.broadinstitute.org/gsea/msigdb/cards/KEGG_PROPANOATE_METABOLISM KEGG_ENDOCYTOSIS 183 18 0.21 0.2587 0.488 CHMP5,STAM,PSD4,ARRB1,ARFGAP3,IQSEC1,EPS15,CBLC,GRK6,CLTB,PIP5K1A,UNC45A,PARD3,RAB11B,IL2RA,ARAP3,DNM1,RNF41 http://www.broadinstitute.org/gsea/msigdb/cards/KEGG_ENDOCYTOSIS KEGG_ECM_RECEPTOR_INTERACTION 84 9 0.29 0.2871 0.488 GP6,CD36,TNC,LAMB2,GP1BB,GP1BA,TNXB,ITGA2,ITGA3 http://www.broadinstitute.org/gsea/msigdb/cards/KEGG_ECM_RECEPTOR_INTERACTION KEGG_NEUROTROPHIN_SIGNALING_PATHWAY 126 13 0.24 0.2773 0.488 RELA,KRAS,NTRK3,ATF4,NFKB1,SHC3,AKT2,PRKCD,SOS1,CALML6,PIK3R1,RPS6KA4,RPS6KA1 http://www.broadinstitute.org/gsea/msigdb/cards/KEGG_NEUROTROPHIN_SIGNALING_PATHWAY KEGG_REGULATION_OF_ACTIN_CYTOSKELETON 215 21 0.18 0.2678 0.488 ROCK1,KRAS,FGF6,ARHGEF6,ABI2,SOS1,GNA12,FGF11,MYL10,ACTN4,PPP1CC,SSH3,VAV3,ITGA2,MYLPF,ITGA3,ITGAD,PIP5K1A,PAK6,PIK3R1,APC http://www.broadinstitute.org/gsea/msigdb/cards/KEGG_REGULATION_OF_ACTIN_CYTOSKELETON KEGG_ALDOSTERONE_REGULATED_SODIUM_REABSORPTION 42 5 0.45 0.2862 0.488 ATP1B4,PDPK1,KRAS,PIK3R1,HSD11B1 http://www.broadinstitute.org/gsea/msigdb/cards/KEGG_ALDOSTERONE_REGULATED_SODIUM_REABSORPTION KEGG_HUNTINGTONS_DISEASE 183 17 0.19 0.2817 0.488 EP300,NDUFA4L2,NDUFV3,NFE2L1,CLTB,UQCRC1,NDUFS5,ATP5O,NDUFC2,COX4I1,NDUFB5,ATP5G1,POLR2B,DNAI1,NDUFA3,NDUFA8,ITPR1 http://www.broadinstitute.org/gsea/msigdb/cards/KEGG_HUNTINGTONS_DISEASE BIOCARTA_MTOR_PATHWAY 23 3 0.58 0.3122 0.5118 RPS6KB1,PDPK1,PIK3R1 http://www.broadinstitute.org/gsea/msigdb/cards/BIOCARTA_MTOR_PATHWAY BIOCARTA_IGF1R_PATHWAY 23 3 0.58 0.3122 0.5118 RPS6KA1,SOS1,PIK3R1 http://www.broadinstitute.org/gsea/msigdb/cards/BIOCARTA_IGF1R_PATHWAY BIOCARTA_RAC1_PATHWAY 23 3 0.58 0.3122 0.5118 PPP1R12B,RPS6KB1,PIK3R1 http://www.broadinstitute.org/gsea/msigdb/cards/BIOCARTA_RAC1_PATHWAY KEGG_PYRIMIDINE_METABOLISM 98 10 0.24 0.3132 0.5118 NT5C2,NME7,ENTPD6,UPB1,AK3L1,POLD2,DUT,POLR1C,POLR2B,POLR3B http://www.broadinstitute.org/gsea/msigdb/cards/KEGG_PYRIMIDINE_METABOLISM KEGG_PROXIMAL_TUBULE_BICARBONATE_RECLAMATION 23 3 0.58 0.3122 0.5118 SLC38A3,ATP1B4,AQP1 http://www.broadinstitute.org/gsea/msigdb/cards/KEGG_PROXIMAL_TUBULE_BICARBONATE_RECLAMATION BIOCARTA_CARM_ER_PATHWAY 35 4 0.43 0.3291 0.5138 MEF2C,HDAC10,ESR1,EP300 http://www.broadinstitute.org/gsea/msigdb/cards/BIOCARTA_CARM_ER_PATHWAY BIOCARTA_G2_PATHWAY 24 3 0.52 0.3364 0.5138 WEE1,EP300,RPS6KA1 http://www.broadinstitute.org/gsea/msigdb/cards/BIOCARTA_G2_PATHWAY BIOCARTA_CXCR4_PATHWAY 24 3 0.52 0.3364 0.5138 RELA,NFKB1,PIK3R1 http://www.broadinstitute.org/gsea/msigdb/cards/BIOCARTA_CXCR4_PATHWAY BIOCARTA_ECM_PATHWAY 24 3 0.52 0.3364 0.5138 ROCK1,FYN,PIK3R1 http://www.broadinstitute.org/gsea/msigdb/cards/BIOCARTA_ECM_PATHWAY BIOCARTA_EIF4_PATHWAY 24 3 0.52 0.3364 0.5138 RPS6KB1,PDPK1,PIK3R1 http://www.broadinstitute.org/gsea/msigdb/cards/BIOCARTA_EIF4_PATHWAY BIOCARTA_TPO_PATHWAY 24 3 0.52 0.3364 0.5138 STAT5B,SOS1,PIK3R1 http://www.broadinstitute.org/gsea/msigdb/cards/BIOCARTA_TPO_PATHWAY KEGG_ABC_TRANSPORTERS 44 5 0.38 0.3206 0.5138 ABCA9,ABCD4,ABCG5,ABCC3,ABCC5 http://www.broadinstitute.org/gsea/msigdb/cards/KEGG_ABC_TRANSPORTERS KEGG_DORSO_VENTRAL_AXIS_FORMATION 25 3 0.52 0.3364 0.5138 KRAS,SOS1,NOTCH1 http://www.broadinstitute.org/gsea/msigdb/cards/KEGG_DORSO_VENTRAL_AXIS_FORMATION KEGG_FOCAL_ADHESION 201 19 0.13 0.3377 0.5138 ROCK1,LAMB2,PDPK1,SOS1,FYN,MYL10,ACTN4,PPP1CC,ELK1,VAV3,MYLPF,ITGA2,ITGA3,PAK6,SHC3,AKT2,TNC,PIK3R1,TNXB http://www.broadinstitute.org/gsea/msigdb/cards/KEGG_FOCAL_ADHESION KEGG_JAK_STAT_SIGNALING_PATHWAY 155 15 0.17 0.3249 0.5138 STAT5B,STAM,SOCS7,IL24,EP300,PIAS3,CBLC,IL5RA,SPRY4,IL4R,MYC,AKT2,SOS1,PIK3R1,IL2RA http://www.broadinstitute.org/gsea/msigdb/cards/KEGG_JAK_STAT_SIGNALING_PATHWAY KEGG_VASOPRESSIN_REGULATED_WATER_REABSORPTION 44 5 0.38 0.3206 0.5138 ADCY3,DYNC2LI1,AQP3,RAB11B,DYNC1H1 http://www.broadinstitute.org/gsea/msigdb/cards/KEGG_VASOPRESSIN_REGULATED_WATER_REABSORPTION KEGG_BASAL_CELL_CARCINOMA 55 6 0.32 0.3273 0.5138 WNT2,SUFU,APC,DVL3,FZD3,FZD5 http://www.broadinstitute.org/gsea/msigdb/cards/KEGG_BASAL_CELL_CARCINOMA BIOCARTA_EIF_PATHWAY 16 2 0.61 0.3702 0.5241 EEF2,EEF2K http://www.broadinstitute.org/gsea/msigdb/cards/BIOCARTA_EIF_PATHWAY BIOCARTA_FMLP_PATHWAY 37 4 0.35 0.3691 0.5241 ELK1,NFKB1,NFATC1,RELA http://www.broadinstitute.org/gsea/msigdb/cards/BIOCARTA_FMLP_PATHWAY BIOCARTA_HIF_PATHWAY 15 2 0.61 0.3702 0.5241 ARNT,EP300 http://www.broadinstitute.org/gsea/msigdb/cards/BIOCARTA_HIF_PATHWAY BIOCARTA_IL3_PATHWAY 15 2 0.61 0.3702 0.5241 STAT5B,SOS1 http://www.broadinstitute.org/gsea/msigdb/cards/BIOCARTA_IL3_PATHWAY BIOCARTA_BARRESTIN_SRC_PATHWAY 15 2 0.61 0.3702 0.5241 ARRB1,DNM1 http://www.broadinstitute.org/gsea/msigdb/cards/BIOCARTA_BARRESTIN_SRC_PATHWAY BIOCARTA_HSP27_PATHWAY 15 2 0.61 0.3702 0.5241 TNF,DAXX http://www.broadinstitute.org/gsea/msigdb/cards/BIOCARTA_HSP27_PATHWAY BIOCARTA_LONGEVITY_PATHWAY 15 2 0.61 0.3702 0.5241 SOD3,PIK3R1 http://www.broadinstitute.org/gsea/msigdb/cards/BIOCARTA_LONGEVITY_PATHWAY KEGG_GLYCOSYLPHOSPHATIDYLINOSITOL_GPI_ANCHOR_BIOSYNTHESIS 25 3 0.46 0.3605 0.5241 PIGY,PGAP1,PIGT http://www.broadinstitute.org/gsea/msigdb/cards/KEGG_GLYCOSYLPHOSPHATIDYLINOSITOL_GPI_ANCHOR_BIOSYNTHESIS KEGG_GLYCOSPHINGOLIPID_BIOSYNTHESIS_LACTO_AND_NEOLACTO_SERIES 26 3 0.46 0.3605 0.5241 B3GNT3,B4GALT4,B4GALT1 http://www.broadinstitute.org/gsea/msigdb/cards/KEGG_GLYCOSPHINGOLIPID_BIOSYNTHESIS_LACTO_AND_NEOLACTO_SERIES KEGG_DNA_REPLICATION 36 4 0.35 0.3691 0.5241 RPA1,RNASEH2C,DNA2,POLD2 http://www.broadinstitute.org/gsea/msigdb/cards/KEGG_DNA_REPLICATION KEGG_CELL_CYCLE 128 12 0.15 0.3676 0.5241 TGFB1,CDKN2B,WEE1,EP300,ANAPC11,E2F2,MAD1L1,CCNE1,MYC,RB1,CDK2,GADD45G http://www.broadinstitute.org/gsea/msigdb/cards/KEGG_CELL_CYCLE KEGG_GNRH_SIGNALING_PATHWAY 101 10 0.19 0.3477 0.5241 ADCY3,ADCY4,PLA2G2E,ELK1,KRAS,ATF4,PRKCD,SOS1,CALML6,ITPR1 http://www.broadinstitute.org/gsea/msigdb/cards/KEGG_GNRH_SIGNALING_PATHWAY KEGG_MELANOGENESIS 102 10 0.18 0.3593 0.5241 ADCY3,ADCY4,WNT2,EP300,KRAS,DVL3,TYRP1,CALML6,FZD3,FZD5 http://www.broadinstitute.org/gsea/msigdb/cards/KEGG_MELANOGENESIS KEGG_NOTCH_SIGNALING_PATHWAY 47 5 0.28 0.3727 0.5249 MFNG,MAML3,DVL3,NOTCH1,EP300 http://www.broadinstitute.org/gsea/msigdb/cards/KEGG_NOTCH_SIGNALING_PATHWAY BIOCARTA_WNT_PATHWAY 26 3 0.4 0.3845 0.5358 MYC,APC,GPI http://www.broadinstitute.org/gsea/msigdb/cards/BIOCARTA_WNT_PATHWAY KEGG_GLYCOSAMINOGLYCAN_BIOSYNTHESIS_HEPARAN_SULFATE 26 3 0.4 0.3845 0.5358 HS3ST1,B4GALT7,B3GAT3 http://www.broadinstitute.org/gsea/msigdb/cards/KEGG_GLYCOSAMINOGLYCAN_BIOSYNTHESIS_HEPARAN_SULFATE BIOCARTA_ARAP_PATHWAY 18 2 0.52 0.4015 0.5386 ARFGAP3,CLTB http://www.broadinstitute.org/gsea/msigdb/cards/BIOCARTA_ARAP_PATHWAY BIOCARTA_FCER1_PATHWAY 39 4 0.27 0.4089 0.5386 ELK1,SOS1,PIK3R1,NFATC1 http://www.broadinstitute.org/gsea/msigdb/cards/BIOCARTA_FCER1_PATHWAY BIOCARTA_ACH_PATHWAY 16 2 0.52 0.4015 0.5386 CHRNB1,PIK3R1 http://www.broadinstitute.org/gsea/msigdb/cards/BIOCARTA_ACH_PATHWAY BIOCARTA_CDC42RAC_PATHWAY 16 2 0.52 0.4015 0.5386 ACTR2,PIK3R1 http://www.broadinstitute.org/gsea/msigdb/cards/BIOCARTA_CDC42RAC_PATHWAY BIOCARTA_CREB_PATHWAY 27 3 0.35 0.4082 0.5386 SOS1,PIK3R1,RPS6KA1 http://www.broadinstitute.org/gsea/msigdb/cards/BIOCARTA_CREB_PATHWAY KEGG_PENTOSE_PHOSPHATE_PATHWAY 27 3 0.35 0.4082 0.5386 TALDO1,GPI,H6PD http://www.broadinstitute.org/gsea/msigdb/cards/KEGG_PENTOSE_PHOSPHATE_PATHWAY KEGG_TRYPTOPHAN_METABOLISM 40 4 0.27 0.4089 0.5386 ACAT1,AANAT,MAOA,IDO2 http://www.broadinstitute.org/gsea/msigdb/cards/KEGG_TRYPTOPHAN_METABOLISM KEGG_OTHER_GLYCAN_DEGRADATION 16 2 0.52 0.4015 0.5386 ENGASE,FUCA1 http://www.broadinstitute.org/gsea/msigdb/cards/KEGG_OTHER_GLYCAN_DEGRADATION KEGG_PANTOTHENATE_AND_COA_BIOSYNTHESIS 16 2 0.52 0.4015 0.5386 UPB1,PANK1 http://www.broadinstitute.org/gsea/msigdb/cards/KEGG_PANTOTHENATE_AND_COA_BIOSYNTHESIS KEGG_CARDIAC_MUSCLE_CONTRACTION 78 7 0.17 0.4029 0.5386 UQCRC1,ATP1B4,COX4I1,CACNB2,TPM4,ACTC1,CACNA2D1 http://www.broadinstitute.org/gsea/msigdb/cards/KEGG_CARDIAC_MUSCLE_CONTRACTION KEGG_MELANOMA 71 7 0.17 0.4029 0.5386 FGF6,E2F2,FGF11,AKT2,RB1,KRAS,PIK3R1 http://www.broadinstitute.org/gsea/msigdb/cards/KEGG_MELANOMA BIOCARTA_MCM_PATHWAY 18 2 0.35 0.4618 0.5533 CDK2,CCNE1 http://www.broadinstitute.org/gsea/msigdb/cards/BIOCARTA_MCM_PATHWAY BIOCARTA_LAIR_PATHWAY 17 2 0.43 0.4321 0.5533 TNF,IL8 http://www.broadinstitute.org/gsea/msigdb/cards/BIOCARTA_LAIR_PATHWAY BIOCARTA_HDAC_PATHWAY 30 3 0.24 0.4548 0.5533 MEF2C,PIK3R1,NFATC1 http://www.broadinstitute.org/gsea/msigdb/cards/BIOCARTA_HDAC_PATHWAY BIOCARTA_INFLAM_PATHWAY 29 3 0.24 0.4548 0.5533 TNF,TGFB1,IL8 http://www.broadinstitute.org/gsea/msigdb/cards/BIOCARTA_INFLAM_PATHWAY BIOCARTA_CALCINEURIN_PATHWAY 19 2 0.35 0.4618 0.5533 MARCKS,NFATC1 http://www.broadinstitute.org/gsea/msigdb/cards/BIOCARTA_CALCINEURIN_PATHWAY BIOCARTA_NDKDYNAMIN_PATHWAY 19 2 0.35 0.4618 0.5533 EPS15,DNM1 http://www.broadinstitute.org/gsea/msigdb/cards/BIOCARTA_NDKDYNAMIN_PATHWAY BIOCARTA_IL10_PATHWAY 17 2 0.43 0.4321 0.5533 TNF,STAT5B http://www.broadinstitute.org/gsea/msigdb/cards/BIOCARTA_IL10_PATHWAY BIOCARTA_MEF2D_PATHWAY 21 2 0.35 0.4618 0.5533 EP300,NFATC1 http://www.broadinstitute.org/gsea/msigdb/cards/BIOCARTA_MEF2D_PATHWAY BIOCARTA_SPRY_PATHWAY 18 2 0.35 0.4618 0.5533 SPRY4,SOS1 http://www.broadinstitute.org/gsea/msigdb/cards/BIOCARTA_SPRY_PATHWAY BIOCARTA_CTLA4_PATHWAY 21 2 0.35 0.4618 0.5533 PIK3R1,ICOSLG http://www.broadinstitute.org/gsea/msigdb/cards/BIOCARTA_CTLA4_PATHWAY KEGG_HISTIDINE_METABOLISM 29 3 0.24 0.4548 0.5533 ASPA,ALDH1A3,MAOA http://www.broadinstitute.org/gsea/msigdb/cards/KEGG_HISTIDINE_METABOLISM KEGG_LINOLEIC_ACID_METABOLISM 29 3 0.29 0.4317 0.5533 CYP3A5,CYP2C8,PLA2G2E http://www.broadinstitute.org/gsea/msigdb/cards/KEGG_LINOLEIC_ACID_METABOLISM KEGG_AMINOACYL_TRNA_BIOSYNTHESIS 41 4 0.23 0.4286 0.5533 FARS2,YARS,GARS,SARS2 http://www.broadinstitute.org/gsea/msigdb/cards/KEGG_AMINOACYL_TRNA_BIOSYNTHESIS KEGG_RNA_POLYMERASE 29 3 0.24 0.4548 0.5533 POLR2B,POLR1C,POLR3B http://www.broadinstitute.org/gsea/msigdb/cards/KEGG_RNA_POLYMERASE KEGG_NEUROACTIVE_LIGAND_RECEPTOR_INTERACTION 272 24 0.02 0.4471 0.5533 GRIN3B,GRIN3A,GRIN2A,SSTR4,LPAR6,PPYR1,GPR156,CHRNB4,CHRNB1,PARD3,PTGFR,F2RL2,GRIK3,GRIK5,VIPR1,GALR3,ADORA2A,CNR1,P2RY1,GABRP,TACR1,GABBR1,PRSS1,TSHB http://www.broadinstitute.org/gsea/msigdb/cards/KEGG_NEUROACTIVE_LIGAND_RECEPTOR_INTERACTION KEGG_LYSOSOME 121 11 0.07 0.4476 0.5533 NPC2,ARSB,CLTB,HYAL1,CTSD,PLA2G15,CEL,FUCA1,ARSA,AP4B1,ATP6V0A2 http://www.broadinstitute.org/gsea/msigdb/cards/KEGG_LYSOSOME KEGG_TIGHT_JUNCTION 134 12 0.07 0.4422 0.5533 MYL10,CSNK2A2,ACTN4,CTNNA1,CTNNA3,KRAS,MYLPF,AKT2,PPP2R1A,PRKCD,CLDN16,PARD3 http://www.broadinstitute.org/gsea/msigdb/cards/KEGG_TIGHT_JUNCTION KEGG_NATURAL_KILLER_CELL_MEDIATED_CYTOTOXICITY 137 12 0.07 0.4422 0.5533 KRAS,VAV3,SHC3,SH2D1B,NCR1,NCR3,TNF,SOS1,NFAT5,PIK3R1,NFATC1,FYN http://www.broadinstitute.org/gsea/msigdb/cards/KEGG_NATURAL_KILLER_CELL_MEDIATED_CYTOTOXICITY KEGG_FC_GAMMA_R_MEDIATED_PHAGOCYTOSIS 97 9 0.1 0.4347 0.5533 RPS6KB1,VAV3,MARCKS,PIP5K1A,AKT2,PRKCD,PPAP2A,PIK3R1,DNM1 http://www.broadinstitute.org/gsea/msigdb/cards/KEGG_FC_GAMMA_R_MEDIATED_PHAGOCYTOSIS KEGG_PROGESTERONE_MEDIATED_OOCYTE_MATURATION 86 8 0.11 0.44 0.5533 ADCY3,ADCY4,AKT2,CDK2,ANAPC11,KRAS,PIK3R1,RPS6KA1 http://www.broadinstitute.org/gsea/msigdb/cards/KEGG_PROGESTERONE_MEDIATED_OOCYTE_MATURATION BIOCARTA_FAS_PATHWAY 30 3 0.19 0.4775 0.5668 DAXX,LMNA,RB1 http://www.broadinstitute.org/gsea/msigdb/cards/BIOCARTA_FAS_PATHWAY KEGG_O_GLYCAN_BIOSYNTHESIS 30 3 0.19 0.4775 0.5668 GALNT4,GALNT10,GALNTL2 http://www.broadinstitute.org/gsea/msigdb/cards/KEGG_O_GLYCAN_BIOSYNTHESIS KEGG_GAP_JUNCTION 90 8 0.06 0.4795 0.5668 ADCY3,ADCY4,TUBB6,TUBB3,KRAS,SOS1,ITPR1,TUBAL3 http://www.broadinstitute.org/gsea/msigdb/cards/KEGG_GAP_JUNCTION BIOCARTA_MTA3_PATHWAY 19 2 0.27 0.4906 0.5747 ESR1,CTSD http://www.broadinstitute.org/gsea/msigdb/cards/BIOCARTA_MTA3_PATHWAY BIOCARTA_TH1TH2_PATHWAY 19 2 0.27 0.4906 0.5747 IL2RA,IL4R http://www.broadinstitute.org/gsea/msigdb/cards/BIOCARTA_TH1TH2_PATHWAY KEGG_PATHOGENIC_ESCHERICHIA_COLI_INFECTION 59 5 0.08 0.493 0.575 TUBB6,TUBB3,ROCK1,FYN,TUBAL3 http://www.broadinstitute.org/gsea/msigdb/cards/KEGG_PATHOGENIC_ESCHERICHIA_COLI_INFECTION KEGG_SYSTEMIC_LUPUS_ERYTHEMATOSUS 140 11 0 0.5138 0.5966 SNRPD3,H2AFY,ACTN4,GRIN2A,HIST1H4I,HIST2H2AB,HIST3H2A,C8G,HIST1H2AC,C9,TNF http://www.broadinstitute.org/gsea/msigdb/cards/KEGG_SYSTEMIC_LUPUS_ERYTHEMATOSUS BIOCARTA_ACTINY_PATHWAY 20 2 0.19 0.5184 0.5993 ABI2,ACTR2 http://www.broadinstitute.org/gsea/msigdb/cards/BIOCARTA_ACTINY_PATHWAY KEGG_ARACHIDONIC_ACID_METABOLISM 58 5 0.03 0.5259 0.6022 GPX7,PLA2G2E,CYP4A22,CYP2C8,CYP4A11 http://www.broadinstitute.org/gsea/msigdb/cards/KEGG_ARACHIDONIC_ACID_METABOLISM KEGG_PROTEASOME 48 4 0.06 0.5239 0.6022 PSMB4,PSMB3,PSMD1,PSMA3 http://www.broadinstitute.org/gsea/msigdb/cards/KEGG_PROTEASOME KEGG_P53_SIGNALING_PATHWAY 69 6 0.01 0.5277 0.6022 RPRM,CCNE1,CDK2,GADD45G,MDM4,PERP http://www.broadinstitute.org/gsea/msigdb/cards/KEGG_P53_SIGNALING_PATHWAY BIOCARTA_AT1R_PATHWAY 34 3 0.06 0.5428 0.6064 MEF2C,ELK1,SOS1 http://www.broadinstitute.org/gsea/msigdb/cards/BIOCARTA_AT1R_PATHWAY BIOCARTA_CYTOKINE_PATHWAY 21 2 0.12 0.5451 0.6064 TNF,IL8 http://www.broadinstitute.org/gsea/msigdb/cards/BIOCARTA_CYTOKINE_PATHWAY BIOCARTA_MITOCHONDRIA_PATHWAY 21 2 0.12 0.5451 0.6064 ENDOG,DIABLO http://www.broadinstitute.org/gsea/msigdb/cards/BIOCARTA_MITOCHONDRIA_PATHWAY BIOCARTA_TFF_PATHWAY 21 2 0.12 0.5451 0.6064 SOS1,PIK3R1 http://www.broadinstitute.org/gsea/msigdb/cards/BIOCARTA_TFF_PATHWAY KEGG_BUTANOATE_METABOLISM 34 3 0.06 0.5428 0.6064 ACAT1,PDHA1,HMGCL http://www.broadinstitute.org/gsea/msigdb/cards/KEGG_BUTANOATE_METABOLISM KEGG_REGULATION_OF_AUTOPHAGY 35 3 0.06 0.5428 0.6064 ATG7,PRKAA2,ATG4B http://www.broadinstitute.org/gsea/msigdb/cards/KEGG_REGULATION_OF_AUTOPHAGY BIOCARTA_BCR_PATHWAY 35 3 0.01 0.5634 0.6164 ELK1,SOS1,NFATC1 http://www.broadinstitute.org/gsea/msigdb/cards/BIOCARTA_BCR_PATHWAY KEGG_FRUCTOSE_AND_MANNOSE_METABOLISM 34 3 0.01 0.5634 0.6164 HK2,AKR1B1,FUK http://www.broadinstitute.org/gsea/msigdb/cards/KEGG_FRUCTOSE_AND_MANNOSE_METABOLISM KEGG_CYSTEINE_AND_METHIONINE_METABOLISM 34 3 0.01 0.5634 0.6164 MTR,AHCYL1,MPST http://www.broadinstitute.org/gsea/msigdb/cards/KEGG_CYSTEINE_AND_METHIONINE_METABOLISM KEGG_N_GLYCAN_BIOSYNTHESIS 46 4 -0.01 0.5598 0.6164 TUSC3,ALG3,ALG6,B4GALT1 http://www.broadinstitute.org/gsea/msigdb/cards/KEGG_N_GLYCAN_BIOSYNTHESIS BIOCARTA_PTDINS_PATHWAY 23 2 -0.01 0.5955 0.6488 RPS6KB1,PDPK1 http://www.broadinstitute.org/gsea/msigdb/cards/BIOCARTA_PTDINS_PATHWAY KEGG_STARCH_AND_SUCROSE_METABOLISM 52 4 -0.1 0.6108 0.6627 HK2,G6PC2,GPI,GBE1 http://www.broadinstitute.org/gsea/msigdb/cards/KEGG_STARCH_AND_SUCROSE_METABOLISM BIOCARTA_MET_PATHWAY 37 3 -0.11 0.6219 0.6721 ELK1,SOS1,PIK3R1 http://www.broadinstitute.org/gsea/msigdb/cards/BIOCARTA_MET_PATHWAY KEGG_VEGF_SIGNALING_PATHWAY 76 6 -0.13 0.6254 0.6731 AKT2,PLA2G2E,KRAS,NFAT5,PIK3R1,NFATC1 http://www.broadinstitute.org/gsea/msigdb/cards/KEGG_VEGF_SIGNALING_PATHWAY KEGG_PHOSPHATIDYLINOSITOL_SIGNALING_SYSTEM 76 6 -0.15 0.6384 0.6806 PIP5K1A,INPP1,DGKG,CALML6,PIK3R1,ITPR1 http://www.broadinstitute.org/gsea/msigdb/cards/KEGG_PHOSPHATIDYLINOSITOL_SIGNALING_SYSTEM KEGG_TOLL_LIKE_RECEPTOR_SIGNALING_PATHWAY 102 8 -0.14 0.6387 0.6806 TIRAP,RELA,NFKB1,TICAM1,AKT2,TNF,PIK3R1,IL8 http://www.broadinstitute.org/gsea/msigdb/cards/KEGG_TOLL_LIKE_RECEPTOR_SIGNALING_PATHWAY KEGG_TASTE_TRANSDUCTION 52 4 -0.16 0.6427 0.6806 ADCY4,TAS2R20,TAS2R13,TAS2R19 http://www.broadinstitute.org/gsea/msigdb/cards/KEGG_TASTE_TRANSDUCTION KEGG_MATURITY_ONSET_DIABETES_OF_THE_YOUNG 25 2 -0.13 0.6415 0.6806 PAX6,PDX1 http://www.broadinstitute.org/gsea/msigdb/cards/KEGG_MATURITY_ONSET_DIABETES_OF_THE_YOUNG BIOCARTA_BAD_PATHWAY 26 2 -0.18 0.6629 0.6963 PIK3R1,RPS6KA1 http://www.broadinstitute.org/gsea/msigdb/cards/BIOCARTA_BAD_PATHWAY KEGG_SELENOAMINO_ACID_METABOLISM 26 2 -0.18 0.6629 0.6963 SEPHS1,AHCYL1 http://www.broadinstitute.org/gsea/msigdb/cards/KEGG_SELENOAMINO_ACID_METABOLISM KEGG_LEUKOCYTE_TRANSENDOTHELIAL_MIGRATION 118 9 -0.17 0.6654 0.6963 MYL10,ROCK1,ACTN4,CTNNA1,CTNNA3,VAV3,MYLPF,CLDN16,PIK3R1 http://www.broadinstitute.org/gsea/msigdb/cards/KEGG_LEUKOCYTE_TRANSENDOTHELIAL_MIGRATION BIOCARTA_NFAT_PATHWAY 54 4 -0.21 0.6728 0.6985 MEF2C,RPS6KB1,PIK3R1,NFATC1 http://www.broadinstitute.org/gsea/msigdb/cards/BIOCARTA_NFAT_PATHWAY KEGG_AMYOTROPHIC_LATERAL_SCLEROSIS_ALS 53 4 -0.21 0.6728 0.6985 DAXX,GRIN2A,TNF,TNFRSF1A http://www.broadinstitute.org/gsea/msigdb/cards/KEGG_AMYOTROPHIC_LATERAL_SCLEROSIS_ALS BIOCARTA_EDG1_PATHWAY 27 2 -0.24 0.6833 0.7039 PIK3R1,SMPD2 http://www.broadinstitute.org/gsea/msigdb/cards/BIOCARTA_EDG1_PATHWAY KEGG_PENTOSE_AND_GLUCURONATE_INTERCONVERSIONS 28 2 -0.24 0.6833 0.7039 DHDH,AKR1B1 http://www.broadinstitute.org/gsea/msigdb/cards/KEGG_PENTOSE_AND_GLUCURONATE_INTERCONVERSIONS KEGG_STEROID_HORMONE_BIOSYNTHESIS 55 4 -0.24 0.6872 0.7052 CYP3A5,SULT1E1,HSD11B1,COMT http://www.broadinstitute.org/gsea/msigdb/cards/KEGG_STEROID_HORMONE_BIOSYNTHESIS BIOCARTA_NKT_PATHWAY 28 2 -0.29 0.7026 0.7128 TGFB1,IL4R http://www.broadinstitute.org/gsea/msigdb/cards/BIOCARTA_NKT_PATHWAY KEGG_CYTOSOLIC_DNA_SENSING_PATHWAY 56 4 -0.27 0.7011 0.7128 NFKB1,RELA,POLR1C,POLR3B http://www.broadinstitute.org/gsea/msigdb/cards/KEGG_CYTOSOLIC_DNA_SENSING_PATHWAY KEGG_LONG_TERM_DEPRESSION 69 5 -0.25 0.6991 0.7128 GNA12,PPP2R1A,PLA2G2E,KRAS,ITPR1 http://www.broadinstitute.org/gsea/msigdb/cards/KEGG_LONG_TERM_DEPRESSION BIOCARTA_BIOPEPTIDES_PATHWAY 43 3 -0.29 0.7069 0.7143 STAT5B,SOS1,FYN http://www.broadinstitute.org/gsea/msigdb/cards/BIOCARTA_BIOPEPTIDES_PATHWAY BIOCARTA_NUCLEARRS_PATHWAY 15 1 -0.29 0.713 0.7151 ABCC3 http://www.broadinstitute.org/gsea/msigdb/cards/BIOCARTA_NUCLEARRS_PATHWAY KEGG_COMPLEMENT_AND_COAGULATION_CASCADES 69 5 -0.27 0.7113 0.7151 PLAUR,C8G,C9,C4BPA,CD55 http://www.broadinstitute.org/gsea/msigdb/cards/KEGG_COMPLEMENT_AND_COAGULATION_CASCADES BIOCARTA_VEGF_PATHWAY 29 2 -0.34 0.721 0.7172 ARNT,PIK3R1 http://www.broadinstitute.org/gsea/msigdb/cards/BIOCARTA_VEGF_PATHWAY KEGG_RIG_I_LIKE_RECEPTOR_SIGNALING_PATHWAY 71 5 -0.29 0.7232 0.7172 NFKB1,RELA,TRAF2,TNF,IL8 http://www.broadinstitute.org/gsea/msigdb/cards/KEGG_RIG_I_LIKE_RECEPTOR_SIGNALING_PATHWAY KEGG_LEISHMANIA_INFECTION 72 5 -0.29 0.7232 0.7172 NFKB1,TGFB1,RELA,TNF,ELK1 http://www.broadinstitute.org/gsea/msigdb/cards/KEGG_LEISHMANIA_INFECTION BIOCARTA_ERYTH_PATHWAY 15 1 -0.39 0.7375 0.7232 TGFB1 http://www.broadinstitute.org/gsea/msigdb/cards/BIOCARTA_ERYTH_PATHWAY BIOCARTA_IL17_PATHWAY 17 1 -0.39 0.7375 0.7232 IL8 http://www.broadinstitute.org/gsea/msigdb/cards/BIOCARTA_IL17_PATHWAY BIOCARTA_STEM_PATHWAY 15 1 -0.39 0.7375 0.7232 IL8 http://www.broadinstitute.org/gsea/msigdb/cards/BIOCARTA_STEM_PATHWAY KEGG_CALCIUM_SIGNALING_PATHWAY 178 13 -0.24 0.7454 0.7283 ADCY3,ADCY4,GNA14,BST1,GRIN2A,RYR3,ADORA2A,TACR1,PDE1C,CALML6,PTGFR,ITPR1,PLN http://www.broadinstitute.org/gsea/msigdb/cards/KEGG_CALCIUM_SIGNALING_PATHWAY BIOCARTA_BCELLSURVIVAL_PATHWAY 16 1 -0.48 0.7599 0.729 PIK3R1 http://www.broadinstitute.org/gsea/msigdb/cards/BIOCARTA_BCELLSURVIVAL_PATHWAY BIOCARTA_GATA3_PATHWAY 16 1 -0.48 0.7599 0.729 NFATC1 http://www.broadinstitute.org/gsea/msigdb/cards/BIOCARTA_GATA3_PATHWAY BIOCARTA_IL22BP_PATHWAY 16 1 -0.48 0.7599 0.729 STAT5B http://www.broadinstitute.org/gsea/msigdb/cards/BIOCARTA_IL22BP_PATHWAY KEGG_RIBOFLAVIN_METABOLISM 16 1 -0.48 0.7599 0.729 ACP6 http://www.broadinstitute.org/gsea/msigdb/cards/KEGG_RIBOFLAVIN_METABOLISM KEGG_INTESTINAL_IMMUNE_NETWORK_FOR_IGA_PRODUCTION 48 3 -0.39 0.7504 0.729 TGFB1,MAP3K14,ICOSLG http://www.broadinstitute.org/gsea/msigdb/cards/KEGG_INTESTINAL_IMMUNE_NETWORK_FOR_IGA_PRODUCTION KEGG_ETHER_LIPID_METABOLISM 33 2 -0.48 0.7704 0.7364 PPAP2A,PLA2G2E http://www.broadinstitute.org/gsea/msigdb/cards/KEGG_ETHER_LIPID_METABOLISM KEGG_ONE_CARBON_POOL_BY_FOLATE 17 1 -0.57 0.7804 0.7433 MTR http://www.broadinstitute.org/gsea/msigdb/cards/KEGG_ONE_CARBON_POOL_BY_FOLATE BIOCARTA_MPR_PATHWAY 34 2 -0.57 0.7989 0.7477 ACTR2,RPS6KA1 http://www.broadinstitute.org/gsea/msigdb/cards/BIOCARTA_MPR_PATHWAY BIOCARTA_GPCR_PATHWAY 35 2 -0.57 0.7989 0.7477 ELK1,NFATC1 http://www.broadinstitute.org/gsea/msigdb/cards/BIOCARTA_GPCR_PATHWAY BIOCARTA_UCALPAIN_PATHWAY 18 1 -0.65 0.7992 0.7477 CAPN1 http://www.broadinstitute.org/gsea/msigdb/cards/BIOCARTA_UCALPAIN_PATHWAY KEGG_ALPHA_LINOLENIC_ACID_METABOLISM 19 1 -0.65 0.7992 0.7477 PLA2G2E http://www.broadinstitute.org/gsea/msigdb/cards/KEGG_ALPHA_LINOLENIC_ACID_METABOLISM KEGG_DRUG_METABOLISM_OTHER_ENZYMES 51 3 -0.48 0.7886 0.7477 CYP3A5,CYP2A13,UPB1 http://www.broadinstitute.org/gsea/msigdb/cards/KEGG_DRUG_METABOLISM_OTHER_ENZYMES BIOCARTA_COMP_PATHWAY 19 1 -0.73 0.8163 0.7583 C9 http://www.broadinstitute.org/gsea/msigdb/cards/BIOCARTA_COMP_PATHWAY BIOCARTA_MAL_PATHWAY 19 1 -0.73 0.8163 0.7583 ROCK1 http://www.broadinstitute.org/gsea/msigdb/cards/BIOCARTA_MAL_PATHWAY BIOCARTA_AGR_PATHWAY 36 2 -0.65 0.8243 0.7631 PAK6,NRG1 http://www.broadinstitute.org/gsea/msigdb/cards/BIOCARTA_AGR_PATHWAY BIOCARTA_NKCELLS_PATHWAY 20 1 -0.81 0.832 0.7675 PIK3R1 http://www.broadinstitute.org/gsea/msigdb/cards/BIOCARTA_NKCELLS_PATHWAY BIOCARTA_CASPASE_PATHWAY 23 1 -1.01 0.8715 0.7753 LMNA http://www.broadinstitute.org/gsea/msigdb/cards/BIOCARTA_CASPASE_PATHWAY BIOCARTA_CCR3_PATHWAY 23 1 -1.01 0.8715 0.7753 PPP1R12B http://www.broadinstitute.org/gsea/msigdb/cards/BIOCARTA_CCR3_PATHWAY BIOCARTA_IL12_PATHWAY 23 1 -0.88 0.8463 0.7753 ETV5 http://www.broadinstitute.org/gsea/msigdb/cards/BIOCARTA_IL12_PATHWAY BIOCARTA_NOS1_PATHWAY 22 1 -0.88 0.8463 0.7753 GRIN2A http://www.broadinstitute.org/gsea/msigdb/cards/BIOCARTA_NOS1_PATHWAY BIOCARTA_PGC1A_PATHWAY 24 1 -1.01 0.8715 0.7753 MEF2C http://www.broadinstitute.org/gsea/msigdb/cards/BIOCARTA_PGC1A_PATHWAY KEGG_BETA_ALANINE_METABOLISM 22 1 -0.94 0.8595 0.7753 UPB1 http://www.broadinstitute.org/gsea/msigdb/cards/KEGG_BETA_ALANINE_METABOLISM KEGG_INOSITOL_PHOSPHATE_METABOLISM 54 3 -0.65 0.8504 0.7753 PIP5K1A,MIOX,INPP1 http://www.broadinstitute.org/gsea/msigdb/cards/KEGG_INOSITOL_PHOSPHATE_METABOLISM KEGG_NITROGEN_METABOLISM 23 1 -1.01 0.8715 0.7753 ASNS http://www.broadinstitute.org/gsea/msigdb/cards/KEGG_NITROGEN_METABOLISM KEGG_BIOSYNTHESIS_OF_UNSATURATED_FATTY_ACIDS 22 1 -0.94 0.8595 0.7753 PTPLA http://www.broadinstitute.org/gsea/msigdb/cards/KEGG_BIOSYNTHESIS_OF_UNSATURATED_FATTY_ACIDS KEGG_HEDGEHOG_SIGNALING_PATHWAY 56 3 -0.71 0.8672 0.7753 WNT2,SUFU,CSNK1E http://www.broadinstitute.org/gsea/msigdb/cards/KEGG_HEDGEHOG_SIGNALING_PATHWAY KEGG_CELL_ADHESION_MOLECULES_CAMS 134 8 -0.51 0.8743 0.7753 PVR,L1CAM,PDCD1,NRXN3,ICOSLG,CLDN16,NLGN1,CDH15 http://www.broadinstitute.org/gsea/msigdb/cards/KEGG_CELL_ADHESION_MOLECULES_CAMS KEGG_TYPE_I_DIABETES_MELLITUS 44 2 -0.84 0.8755 0.7753 TNF,PTPRN2 http://www.broadinstitute.org/gsea/msigdb/cards/KEGG_TYPE_I_DIABETES_MELLITUS KEGG_ASCORBATE_AND_ALDARATE_METABOLISM 25 1 -1.07 0.8824 0.7788 MIOX http://www.broadinstitute.org/gsea/msigdb/cards/KEGG_ASCORBATE_AND_ALDARATE_METABOLISM BIOCARTA_MCALPAIN_PATHWAY 25 1 -1.13 0.8925 0.7824 CAPN1 http://www.broadinstitute.org/gsea/msigdb/cards/BIOCARTA_MCALPAIN_PATHWAY KEGG_VALINE_LEUCINE_AND_ISOLEUCINE_DEGRADATION 44 2 -0.91 0.8918 0.7824 ACAT1,HMGCL http://www.broadinstitute.org/gsea/msigdb/cards/KEGG_VALINE_LEUCINE_AND_ISOLEUCINE_DEGRADATION BIOCARTA_PYK2_PATHWAY 29 1 -1.29 0.9177 0.7993 SOS1 http://www.broadinstitute.org/gsea/msigdb/cards/BIOCARTA_PYK2_PATHWAY KEGG_ASTHMA 30 1 -1.29 0.9177 0.7993 TNF http://www.broadinstitute.org/gsea/msigdb/cards/KEGG_ASTHMA BIOCARTA_NO1_PATHWAY 31 1 -1.39 0.9312 0.7999 PDE2A http://www.broadinstitute.org/gsea/msigdb/cards/BIOCARTA_NO1_PATHWAY BIOCARTA_CSK_PATHWAY 24 0 0 1 0.7999 http://www.broadinstitute.org/gsea/msigdb/cards/BIOCARTA_CSK_PATHWAY BIOCARTA_AMI_PATHWAY 20 0 0 1 0.7999 http://www.broadinstitute.org/gsea/msigdb/cards/BIOCARTA_AMI_PATHWAY BIOCARTA_CHEMICAL_PATHWAY 22 0 0 1 0.7999 http://www.broadinstitute.org/gsea/msigdb/cards/BIOCARTA_CHEMICAL_PATHWAY BIOCARTA_SPPA_PATHWAY 22 0 0 1 0.7999 http://www.broadinstitute.org/gsea/msigdb/cards/BIOCARTA_SPPA_PATHWAY BIOCARTA_CTL_PATHWAY 15 0 0 1 0.7999 http://www.broadinstitute.org/gsea/msigdb/cards/BIOCARTA_CTL_PATHWAY BIOCARTA_DC_PATHWAY 22 0 0 1 0.7999 http://www.broadinstitute.org/gsea/msigdb/cards/BIOCARTA_DC_PATHWAY BIOCARTA_INTRINSIC_PATHWAY 23 0 0 1 0.7999 http://www.broadinstitute.org/gsea/msigdb/cards/BIOCARTA_INTRINSIC_PATHWAY BIOCARTA_ETS_PATHWAY 18 0 0 1 0.7999 http://www.broadinstitute.org/gsea/msigdb/cards/BIOCARTA_ETS_PATHWAY BIOCARTA_NO2IL12_PATHWAY 17 0 0 1 0.7999 http://www.broadinstitute.org/gsea/msigdb/cards/BIOCARTA_NO2IL12_PATHWAY BIOCARTA_RARRXR_PATHWAY 15 0 0 1 0.7999 http://www.broadinstitute.org/gsea/msigdb/cards/BIOCARTA_RARRXR_PATHWAY BIOCARTA_CCR5_PATHWAY 18 0 0 1 0.7999 http://www.broadinstitute.org/gsea/msigdb/cards/BIOCARTA_CCR5_PATHWAY BIOCARTA_AKAPCENTROSOME_PATHWAY 15 0 0 1 0.7999 http://www.broadinstitute.org/gsea/msigdb/cards/BIOCARTA_AKAPCENTROSOME_PATHWAY BIOCARTA_CK1_PATHWAY 17 0 0 1 0.7999 http://www.broadinstitute.org/gsea/msigdb/cards/BIOCARTA_CK1_PATHWAY BIOCARTA_STATHMIN_PATHWAY 19 0 0 1 0.7999 http://www.broadinstitute.org/gsea/msigdb/cards/BIOCARTA_STATHMIN_PATHWAY KEGG_PRIMARY_BILE_ACID_BIOSYNTHESIS 16 0 0 1 0.7999 http://www.broadinstitute.org/gsea/msigdb/cards/KEGG_PRIMARY_BILE_ACID_BIOSYNTHESIS KEGG_GLYCOSPHINGOLIPID_BIOSYNTHESIS_GANGLIO_SERIES 15 0 0 1 0.7999 http://www.broadinstitute.org/gsea/msigdb/cards/KEGG_GLYCOSPHINGOLIPID_BIOSYNTHESIS_GANGLIO_SERIES KEGG_GLYOXYLATE_AND_DICARBOXYLATE_METABOLISM 16 0 0 1 0.7999 http://www.broadinstitute.org/gsea/msigdb/cards/KEGG_GLYOXYLATE_AND_DICARBOXYLATE_METABOLISM KEGG_PORPHYRIN_AND_CHLOROPHYLL_METABOLISM 41 1 -1.81 0.9718 0.7999 MMAB http://www.broadinstitute.org/gsea/msigdb/cards/KEGG_PORPHYRIN_AND_CHLOROPHYLL_METABOLISM KEGG_CYTOKINE_CYTOKINE_RECEPTOR_INTERACTION 267 15 -0.61 0.9658 0.7999 CCR6,TGFBR2,IL5RA,IL4R,CXCL1,CXCL3,IL8,TNFSF18,TGFB1,IL24,CX3CL1,TNF,TNFRSF25,TNFRSF1A,IL2RA http://www.broadinstitute.org/gsea/msigdb/cards/KEGG_CYTOKINE_CYTOKINE_RECEPTOR_INTERACTION KEGG_ANTIGEN_PROCESSING_AND_PRESENTATION 89 1 -2.79 0.9991 0.7999 RFXANK http://www.broadinstitute.org/gsea/msigdb/cards/KEGG_ANTIGEN_PROCESSING_AND_PRESENTATION KEGG_OLFACTORY_TRANSDUCTION 389 15 -1.18 0.9999 0.7999 OR52K2,OR52K1,OR56A4,OR2AT4,PDE1C,OR10R2,OR5AC2,OR10X1,OR1L6,CALML6,OR51E1,ADCY3,OR14C36,OR51S1,OR6K6 http://www.broadinstitute.org/gsea/msigdb/cards/KEGG_OLFACTORY_TRANSDUCTION KEGG_AUTOIMMUNE_THYROID_DISEASE 53 2 -1.1 0.9296 0.7999 TG,TSHB http://www.broadinstitute.org/gsea/msigdb/cards/KEGG_AUTOIMMUNE_THYROID_DISEASE KEGG_ALLOGRAFT_REJECTION 38 1 -1.61 0.956 0.7999 TNF http://www.broadinstitute.org/gsea/msigdb/cards/KEGG_ALLOGRAFT_REJECTION KEGG_GRAFT_VERSUS_HOST_DISEASE 42 1 -1.69 0.9632 0.7999 TNF http://www.broadinstitute.org/gsea/msigdb/cards/KEGG_GRAFT_VERSUS_HOST_DISEASE KEGG_PRIMARY_IMMUNODEFICIENCY 35 1 -1.61 0.956 0.7999 RFXANK http://www.broadinstitute.org/gsea/msigdb/cards/KEGG_PRIMARY_IMMUNODEFICIENCY KEGG_VIRAL_MYOCARDITIS 73 3 -0.97 0.9329 0.7999 SGCD,CD55,FYN http://www.broadinstitute.org/gsea/msigdb/cards/KEGG_VIRAL_MYOCARDITIS