index	chromosome	region_start	region_end	peak_start	peak_end	enlarged_peak_start	enlarged_peak_end	n_genes_in_region	genes_in_region	n_genes_in_peak	genes_in_peak	n_genes_on_chip	genes_on_chip	top 3
1	1	117892183	155628628	120151588	120221186	119929832	120523955	12	HMGCS2,HSD3B1,HSD3B2,NOTCH2,ADAM30,PHGDH,HAO2,REG4,ZNF697,HSD3BP4,NBPF7,LOC644242,	3	ZNF697,HSD3BP4,LOC644242,	
2	1	245129092	247390793	246113953	246124836	245128189	247386825	16	ZNF124,AHCTF1,SCCPDH,KIF26B,ZNF695,TFB2M,SMYD3,ZNF669,EFCAB2,ZNF670,LOC149134,CNST,LOC255654,C1orf229,MIR3916,ZNF670-ZNF695,	1	SMYD3,	
3	1	117892183	155628628	150859142	150912596	120527361	155958000	297	hsa-mir-555,hsa-mir-92b,hsa-mir-4258,hsa-mir-190b,hsa-mir-554,hsa-mir-4257,hsa-mir-3118-3,hsa-mir-3118-2,hsa-mir-3118-1,ADAR,ARNT,BCL9,CHRNB2,CKS1B,CLK2,CTSK,CTSS,ECM1,EFNA1,EFNA3,EFNA4,ENSA,FCGR1A,FCGR1B,FDPS,FLG,FMO5,GBA,GBAP1,GJA5,GJA8,IL6R,ILF2,IVL,KCNN3,LOR,MCL1,SMCP,MTX1,MUC1,NOTCH2,NPR1,PDZK1,PI4KB,PKLR,PRKAB2,PSMB4,PSMD4,RAB13,RFX5,RIT1,RORC,RPS27,S100A1,S100A2,S100A3,S100A4,S100A5,S100A6,S100A7,S100A8,S100A9,S100A10,S100A11,S100A12,S100A13,SHC1,SPRR1A,SPRR1B,SPRR2A,SPRR2B,SPRR2C,SPRR2D,SPRR2E,SPRR2F,SPRR2G,SPRR3,VPS72,THBS3,TCHH,TPM3,TUFT1,DAP3,HIST2H2AA3,HIST2H2AC,HIST2H2BE,HIST2H4A,PIP5K1A,ANXA9,ITGA10,ADAM15,PEX11B,SELENBP1,PRPF3,ARHGEF2,SEC22B,CHD1L,PDE4DIP,SETDB1,UBAP2L,SV2A,DENND4B,RBM8A,SCAMP3,SF3B4,PIAS3,HAX1,SEMA6C,POLR3C,TXNIP,PMVK,FAM189B,JTB,MTMR11,MLLT11,SLC27A3,TDRKH,CD160,CELF3,VPS45,KIAA0907,POGZ,SYT11,RPRD2,SNAPIN,RUSC1,CA14,NBPF14,C1orf43,CHTOP,LCE2B,SLC39A1,RNF115,TMOD4,CERS2,CRNN,BOLA1,ZBTB7B,APH1A,PLEKHO1,ACP6,GPR89B,OAZ3,DPM3,MRPS21,ADAMTSL4,CRCT1,GON4L,C1orf56,MSTO1,GOLPH3L,YY1AP1,UBE2Q1,FAM63A,ASH1L,LENEP,SLC50A1,CDC42SE1,OTUD7B,PGLYRP4,ATP8B2,FAM91A2,PBXIP1,S100A14,GATAD2B,CGN,ZNF687,HCN3,PRUNE,MRPL9,INTS3,SCNM1,TNFAIP8L2,C1orf54,TRIM46,TARS2,FLAD1,SNX27,ANP32E,HORMAD1,POLR3GL,LCE3D,AQP10,PYGO2,NUP210L,PGLYRP3,GNRHR2,THEM4,GABPB2,TCHHL1,RPTN,TDRD10,SHE,HIST2H3C,DCST2,LIX1L,S100A16,CREB3L4,C1orf51,HFE2,ANKRD35,LELP1,DCST1,BNIPL,SPRR4,PPIAL4A,PDIA3P,LCE4A,NBPF11,NUDT17,KRTCAP2,CRTC2,LCE5A,RIIAD1,THEM5,NBPF15,ANKRD34A,RUSC1-AS1,HIST2H2AB,HIST2H3A,HIST2H2BC,HIST2H2BA,S100A7A,LINGO4,RXFP4,LCE1A,LCE1B,LCE1C,LCE1D,LCE1E,LCE1F,LCE2A,LCE2C,LCE2D,LCE3A,LCE3B,LCE3C,LCE3E,LOC375010,NOTCH2NL,FLJ39739,LOC388692,LYSMD1,HRNR,FLG2,C1orf189,NBPF9,HIST2H2BF,KPRP,LCE6A,HIST2H4B,PRR9,PPIAL4G,PPIAL4D,LOC645166,LOC645676,POU5F1P4,S100A7L2,EMBP1,SRGAP2P2,PPIAL4B,LOC653513,GPR89A,PPIAL4C,HIST2H3D,FAM72B,SCARNA4,SNORA42,MIR554,MIR555,MIR92B,HIST2H2AA4,FAM72D,LOC728855,LOC728875,NBPF24,GPR89C,NBPF16,PDZK1P1,PPIAL4F,LOC728989,PPIAL4E,PFN1P2,MIR190B,C1orf68,MSTO2P,LOC100130000,LOC100132111,NBPF10,FCGR1C,C2CD4D,LOC100286793,LOC100289211,MIR4257,MIR4258,LOC100505666,TNFAIP8L2-SCNM1,	1	SETDB1,	
4	1	24636200	25375177	24666934	24670264	22494844	25889422	55	hsa-mir-3115,hsa-mir-4253,C1QA,C1QB,C1QC,RUNX3,CNR2,E2F2,EPHA8,EPHB2,FUCA1,GALE,HMGCL,HTR1D,ID3,RHCE,RHD,RPL11,TCEA3,TCEB3,LUZP1,ZBTB40,HNRNPR,SRRM1,SRSF10,RCAN3,LYPLA2,KDM1A,TMEM50A,CLIC4,SYF2,LDLRAP1,TMEM57,ASAP3,PNRC2,C1orf63,PITHD1,NIPAL3,GRHL3,IL22RA1,ZNF436,C1orf201,MYOM3,C1orf213,IL28RA,MDS2,LOC284632,C1orf130,LOC729059,MIR3115,MIR4253,LOC100506963,MIR4684,MIR378F,RCAN3AS,	1	GRHL3,	
5	3	67849029	74853611	69887426	69887426	69692981	70239697	1	MITF,	1	MITF,	
6	4	55221801	55227663	55221801	55222296	48068826	59996783	52	IGFBP7,KDR,KIT,PDGFRA,POLR2B,PPAT,REST,SGCB,SPINK2,SRP72,TEC,TXK,CLOCK,CEP135,PAICS,NMU,DCUN1D4,CHIC2,OCIAD1,EXOC1,TMEM165,DANCR,KIAA1211,SLAIN2,USP46,RASL11B,SRD5A3,CWH43,FIP1L1,NOA1,HOPX,LNX1,OCIAD2,SPATA18,ARL9,AASDH,PDCL2,LOC152578,SCFD2,GSX2,SLC10A4,LOC255130,FRYL,ZAR1,LRRC66,RPL21P44,LOC644145,SNORA26,ERVMER34-1,LOC100506462,LOC100506564,MIR4449,	0	[PDGFRA]	
7	5	914233	1348798	1288019	1288694	1287703	1299329	1	TERT,	1	TERT,	
8	6	63924480	66045344	65923117	65937374	63915384	66044559	4	PTP4A1,PHF3,LGSN,EYS,	1	EYS,	
9	7	138773056	140753597	140443897	140458833	138773011	140751621	22	BRAF,NDUFB2,TBXAS1,MKRN1,DENND2A,HIPK2,LUC7L2,MRPS33,ZC3HAV1,PARP12,TTC26,JHDM1D,SLC37A3,ADCK2,CLEC2L,C7orf55,UBN2,KLRG2,RAB19,LOC100129148,LOC100134229,LOC100134713,	1	BRAF,	
10	7	705284	2192070	1741042	1981546	705284	8532733	93	hsa-mir-589,hsa-mir-339,ACTB,GNA12,GPER,ICA1,LFNG,NUDT1,PDGFA,PMS2,PRKAR1B,RAC1,RPA3,FSCN1,ZNF12,AIMP2,MAFK,MAD1L1,EIF3B,CYTH3,KIAA0415,KDELR2,ADAP1,IQCE,SUN1,WIPI2,INTS1,EIF2AK1,SNX8,FTSJ2,NXPH1,GET4,CCZ1,MIOS,RNF216,ZNF853,CYP2W1,HEATR2,ZDHHC4,CHST12,RADIL,PAPOLB,C1GALT1,FAM20C,RBAK,C7orf26,MICALL2,FBXL18,TTYH3,USP42,PSMG3,C7orf50,CARD11,TNRC18,C7orf70,ZFAND2A,COX19,GLCCI1,KIAA1908,GPR146,AMZ1,TMEM184A,BRAT1,SDK1,FOXK1,MMD2,DAGLB,CCZ1B,SLC29A4,RSPH10B,TFAMP1,UNCX,COL28A1,LOC389458,ELFN1,GRID2IP,ZNF815,RNF216P1,PMS2CL,FLJ44511,LOC442497,MIR339,ZNF890P,OCM,MIR589,RSPH10B2,LOC729852,LOC100131257,LOC100288524,RBAK-LOC389458,MIR4648,MIR4655,MIR4656,	3	MAD1L1,ELFN1,MIR4655,	
11	8	52104024	52218346	52197148	52214713	52102658	52218176	0	[PXDNL]	0	[PXDNL]	
12	11	68597104	71671166	69647997	69901274	68888456	70433734	13	hsa-mir-548k,CCND1,CTTN,FGF3,FGF4,PPFIA1,FADD,FGF19,SHANK2,MYEOV,ANO1,ORAOV1,MIR548K,	0	[FGF3]	
13	12	66777290	72979099	69178020	69178020	69177690	69287683	2	CPM,MDM2,	0	[SLC35E3]	
14	12	25239422	25401822	25247706	25377692	24885717	26064637	9	hsa-mir-4302,BCAT1,KRAS,LRMP,CASC1,LYRM5,IFLTD1,C12orf77,MIR4302,	4	KRAS,LRMP,CASC1,LYRM5,	
15	15	77356239	78520548	78398956	78400673	74989154	101884307	261	hsa-mir-1302-10,hsa-mir-1469,hsa-mir-3175,hsa-mir-3174,hsa-mir-9-3,hsa-mir-7-2,hsa-mir-1276,hsa-mir-549,hsa-mir-184,hsa-mir-4313,hsa-mir-631,ACAN,ALDH1A3,ANPEP,BCL2A1,BLM,BNC1,CHD2,CHRNA3,CHRNA5,CHRNB4,CRABP1,CSK,CSPG4,CTSH,CYP1A1,CYP1A2,ETFA,FAH,FES,IDH2,IDH3A,IGF1R,IL16,IREB2,ISG20,MAN2A2,MAN2C1,MEF2A,MFGE8,MPI,NMB,NTRK3,FURIN,PCSK6,PDE8A,PLIN1,POLG,PSMA4,PTPN9,RASGRF1,RCN2,RLBP1,RPS17,SH3GL3,SNRPA1,NR2F2,TYRO3P,AP3B2,ST8SIA2,PEX11A,IQGAP1,PSTPIP1,PRC1,SLC28A1,COX5A,HOMER2,ZNF592,SV2B,ARNT2,SCAMP2,SNUPN,TSPAN3,AP3S2,HMG20A,SEMA4B,CIB2,CIB1,MTHFS,MORF4L1,ABHD2,ADAMTS7,AKAP13,CHSY1,TBC1D2B,MESDC2,ACSBG1,KIAA1024,SYNM,TMED3,SEC11A,GABARAPL3,SIN3A,ULK3,FBXO22,VPS33B,MRPL46,OR4F4,SLCO3A1,SCAPER,HDGFRP3,NGRN,RHCG,BTBD1,TM6SF1,ZFAND6,SCAND2,RPP25,COMMD4,ZSCAN2,DET1,LINS,FANCI,IMP3,DNAJA4,MCTP2,SELS,MESP1,UNC45A,C15orf39,RGMA,WDR93,C15orf17,ADAMTSL3,KIAA1199,ALPK3,FAM108C1,MESDC1,PPCDC,KLHL25,CPEB1,AEN,CRTC3,ISL2,TTC23,MRPS11,EFTUD1,NEIL1,LRRK1,LMAN1L,PEAK1,EDC3,AGSK1,TM2D3,WDR61,STARD5,C15orf5,FAM103A1,MEX3B,LINGO1,WDR73,C15orf42,RCCD1,LOC91450,ARRDC4,LOC91948,UBE2Q2,C15orf40,TARSL2,LRRC28,C15orf27,AGBL1,AGPHD1,WHAMM,FSD2,ASB7,LYSMD4,PGPEP1L,LOC145820,C15orf32,HAPLN3,MESP2,SPATA8,NRG4,LINC00052,C15orf26,ODF3L1,ADAMTS17,SCAMP5,DNM1P46,CERS3,LOC253044,LOC254559,SNX33,C15orf37,LOC283688,LOC283692,LOC283693,FAM154B,LOC283738,LOC283761,FAM169B,LOC338963,TMC3,ZNF774,C15orf38,GOLGA6L5,KIF7,ZNF710,HDDC3,WASH3P,LOC388152,UBE2Q2P1,FLJ42289,ANKRD34C,C15orf58,OR4F6,OR4F15,LOC390660,ST20,FAM174B,LOC400456,MIR184,MIR7-2,MIR9-3,GOLGA6L9,LOC440297,DNM1P41,LOC440300,TTLL13,CPLX3,LOC645752,SH2D7,LOC646938,GOLGA6L10,LOC648809,GOLGA6C,GOLGA6D,SCARNA15,FBXO22-AS1,MIR549,MIR631,LOC727849,LOC727915,ASB9P1,LOC729911,FAM138E,DNM1P35,UBE2Q2P3,UBE2Q2P2,LOC100144604,GPCRLTM7,DDX11L1,DDX11L9,MIR1276,MIR1179,MIR1469,MIR3175,MIR4313,RPS17L,LOC100505679,LOC100506874,LOC100507217,LOC100507472,C15orf38-AP3S2,ST20-MTHFS,MIR4514,MIR4513,MIR3529,MIR4515,MIR4714,	1	CIB2,	
16	20	61989111	62137407	61989111	62126745	46820610	62219837	200	hsa-mir-647,hsa-mir-4326,hsa-mir-124-3,hsa-mir-133a-2,hsa-mir-3195,hsa-mir-1257,hsa-mir-646,hsa-mir-298,hsa-mir-4325,hsa-mir-1302-5,hsa-mir-1259,hsa-mir-3194,ATP5E,BMP7,CDH4,CEBPB,CHRNA4,COL9A3,CSE1L,CSTF1,CTSZ,CYP24A1,EDN3,EEF1A2,GNAS,NPBWR2,KCNB1,KCNG1,KCNQ2,LAMA5,MC3R,MYT1,NFATC2,NTSR1,OPRL1,PCK1,PFDN4,PPP1R3D,PSMA7,PTGIS,PTK6,PTPN1,RPS21,SNAI1,SRMS,STAU1,AURKA,TAF4,TCEA2,TFAP2C,TPD52L2,UBE2V1,ZNF217,RAE1,BCAS1,STX16,TNFRSF6B,DPM1,VAPB,B4GALT5,SPATA2,OSBPL2,ATP9A,ARFRP1,RGS19,SYCP2,ARFGEF2,TCFL5,ADRM1,OGFR,DIDO1,HRH3,SLC9A8,ADNP,SPO11,PRPF6,SS18L1,GTPBP5,GMEB2,SNORD12C,MOCS3,SLCO4A1,STMN3,SLMO2,TH1L,C20orf43,RTEL1,SOX18,YTHDF1,LIME1,UCKL1,C20orf11,PCMTD2,C20orf20,PPP4R1L,RBM38,BCAS4,DDX27,ZFP64,ARFGAP1,DOK5,RNF114,SLC2A4RG,PMEPA1,CASS4,SALL4,ZNFX1,RAB22A,ZNF512B,PREX1,COL20A1,CDH26,SLC17A9,LOC63930,FAM217B,C20orf195,PPDPF,BIRC7,NPEPL1,DNAJC5,TUBB1,ZBP1,CABLES2,PARD6B,ZGPAT,PRIC285,FAM210B,PHACTR3,BHLHE23,NKAIN4,TSHZ2,C20orf85,ZNF831,C20orf166,GATA5,ZBTB46,GCNT7,CBLN4,CTCFL,SAMD10,ABHD16B,LINC00266-1,FAM65C,C20orf151,LOC149773,GNAS-AS1,LSM14B,APCDD1L,C20orf201,FAM209A,C20orf166-AS1,LINC00176,LINC00494,LOC284751,C20orf197,LOC284757,TMEM189,TMEM189-UBE2V1,FAM209B,SUMO1P1,MIR1-1,MIR124-3,MIR133A2,MIR296,ZNFX1-AS1,SNORD12,MIR645,MIR647,HAR1A,HAR1B,UCKL1-AS1,SNORD12B,MIR298,MIR941-1,MIR941-4,MIR941-2,MIR941-3,LOC100127888,DPH3P1,LINC00029,LOC100144597,FLJ16779,MIR1914,MIR1257,MIR4325,MIR3194,MIR4326,MIR3196,MTRNR2L3,LOC100505815,LOC100506384,RTEL1-TNFRSF6B,SLMO2-ATP5E,STX16-NPEPL1,MIR4756,MIR4758,MIR4532,MIR4533,MIR5095,LOC100652730,	3	CHRNA4,EEF1A2,KCNQ2,	
17	22	40395034	43355256	41176563	41236922	41145112	41849513	15	hsa-mir-1281,EP300,RANGAP1,ST13,TEF,RBX1,SLC25A17,TOB2,ZC3H7B,XPNPEP3,L3MBTL2,DNAJB7,CHADL,MIR1281,MIR4766,	3	ST13,SLC25A17,MIR4766,	
