# Created: Thu Jul 12 19:25:04 EDT 2012 by cgaadm_deadline
# Job: 126338    server:  http://tcga-gdac-genepattern.broadinstitute.org:8090/gp/
# Module: MutSigPreprocess urn:lsid:broadinstitute.org:cancer.genome.analysis:00272:84
# Parameters: 
#    individual_set_id = COADREAD
#    maf1 = dependentsValues2711467218948810909.tsv   /gp/getFile.jsp?task=&file=cgaadm_deadline/Axis1460794365381505075.att_dependentsValues2711467218948810909.tsv
#    maf2 = 
#    maf3 = dependentsValues8364190190982078358.tsv   /gp/getFile.jsp?task=&file=cgaadm_deadline/Axis2109172531328228029.att_dependentsValues8364190190982078358.tsv
#    maf4 = 
#    maflabel1 = Broad
#    maflabel2 = WashU
#    maflabel3 = Baylor
#    maflabel4 = 
#    wig1 = dependentsValues962128363007749436.tsv   /gp/getFile.jsp?task=&file=cgaadm_deadline/Axis2592977979950666993.att_dependentsValues962128363007749436.tsv
#    wig2 = 
#    wig3 = dependentsValues1010758032101399239.tsv   /gp/getFile.jsp?task=&file=cgaadm_deadline/Axis2322571119944659521.att_dependentsValues1010758032101399239.tsv
#    wig4 = 
#    build = hg18
#    context65_dir = /xchip/cga1/lawrence/db/context65
#    context65_wig = no_longer_needed
#    num_categories = 4
#    target_list = /xchip/cga1/lawrence/capture/RefSeq_exons_hg18_june2010_fix1.txt
#    paramfile = /xchip/cga1/reference/mutsig_params/MutSig2.0.params.txt
