Broad GDAC Analyses Status
analyses__2012_07_25__lusc_00 Run for Tumor Type: LUSC

TumorBCRClinicalCNLowPMethylationmRNAmRNAseqmiRmiRseqRPPAMAF
LUSC360279282028215422302020178

Note that the links below require Broad internal Firehose login credentials.

PipelineNotRunnableRunnableInProcessSuccessfulUnsuccessful
1Aggregate_Clusters00010
2CopyNumber_GeneBySample00010
3CopyNumber_Gistic200010
4Correlate_Clinical_vs_CopyNumber_Arm10000
5Correlate_Clinical_vs_CopyNumber_Focal10000
6Correlate_Clinical_vs_miR10000
7Correlate_Clinical_vs_Molecular_Signatures10000
8Correlate_Clinical_vs_mRNA10000
9Correlate_Clinical_vs_Mutation10000
10Correlate_CopyNumber_vs_miR10000
11Correlate_CopyNumber_vs_mRNA00010
12Correlate_CopyNumber_vs_mRNAseq00010
13Correlate_Methylation_vs_mRNA00010
14Methylation_Clustering_CNMF00010
15Methylation_Preprocess00010
16miRseq_Clustering_CNMF00010
17miRseq_Clustering_Consensus00010
18miRseq_Preprocess00010
19miR_Clustering_CNMF10000
20miR_Clustering_Consensus10000
21miR_FindDirectTargets10000
22miR_Preprocess10000
23mRNAseq_Clustering_CNMF00010
24mRNAseq_Clustering_Consensus00010
25mRNAseq_Preprocess00010
26mRNA_Clustering_CNMF00010
27mRNA_Clustering_Consensus00010
28mRNA_Preprocess_Median00010
29Mutation_Assessor10000
30Mutation_Significance00100
31Pathway_FindEnrichedGenes10000
32Pathway_Paradigm_Expression00010
33Pathway_Paradigm_Expression_CopyNumber00010
34RPPA_Clustering_CNMF10000
35RPPA_Clustering_Consensus10000
Total1501190

This table generated on Fri Aug 17 15:46:27 2012