Broad GDAC analyses__2012_07_25__pancancer

Tumor	BCR	Clinical	CN	LowP	Methylation	mRNA	mRNAseq	miR	miRseq	RPPA	MAF
PANCANCER	6846	5633	5386	76	5465	2218	3460	1055	3976	2087	2860

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	Pipeline	NotRunnable	Runnable	InProcess	Successful	Unsuccessful
1	Aggregate_Clusters	0	1	0	0	0
2	CopyNumber_GeneBySample	0	0	0	0	1
3	CopyNumber_Gistic2	0	0	0	0	1
4	Correlate_Clinical_vs_CopyNumber_Arm	1	0	0	0	0
5	Correlate_Clinical_vs_CopyNumber_Focal	1	0	0	0	0
6	Correlate_Clinical_vs_miR	0	0	0	1	0
7	Correlate_Clinical_vs_Molecular_Signatures	1	0	0	0	0
8	Correlate_Clinical_vs_mRNA	0	0	0	1	0
9	Correlate_Clinical_vs_Mutation	1	0	0	0	0
10	Correlate_CopyNumber_vs_miR	1	0	0	0	0
11	Correlate_CopyNumber_vs_mRNA	1	0	0	0	0
12	Correlate_CopyNumber_vs_mRNAseq	1	0	0	0	0
13	Correlate_Methylation_vs_mRNA	0	0	0	0	1
14	Methylation_Clustering_CNMF	1	0	0	0	0
15	Methylation_Preprocess	0	0	0	0	1
16	miRseq_Clustering_CNMF	1	0	0	0	0
17	miRseq_Clustering_Consensus	1	0	0	0	0
18	miRseq_Preprocess	1	0	0	0	0
19	miR_Clustering_CNMF	0	0	0	1	0
20	miR_Clustering_Consensus	0	0	0	1	0
21	miR_FindDirectTargets	0	0	0	1	0
22	miR_Preprocess	0	0	0	1	0
23	mRNAseq_Clustering_CNMF	1	0	0	0	0
24	mRNAseq_Clustering_Consensus	1	0	0	0	0
25	mRNAseq_Preprocess	0	0	0	0	1
26	mRNA_Clustering_CNMF	0	0	0	0	1
27	mRNA_Clustering_Consensus	0	0	0	0	1
28	mRNA_Preprocess_Median	0	0	0	1	0
29	Mutation_Assessor	1	0	0	0	0
30	Mutation_Significance	0	0	1	0	0
31	Pathway_FindEnrichedGenes	1	0	0	0	0
32	Pathway_Paradigm_Expression	0	0	0	0	1
33	Pathway_Paradigm_Expression_CopyNumber	1	0	0	0	0
34	RPPA_Clustering_CNMF	1	0	0	0	0
35	RPPA_Clustering_Consensus	1	0	0	0	0
	Total	18	1	1	7	8

This table generated on Fri Aug 17 15:46:28 2012