# Created: Sun Aug 05 13:59:33 EDT 2012 by cgaadm_deadline
# Job: 142831    server:  http://tcga-gdac-genepattern.broadinstitute.org:8090/gp/
# Module: MutSigPreprocess urn:lsid:broadinstitute.org:cancer.genome.analysis:00272:84
# Parameters: 
#    individual_set_id = COADREAD
#    maf1 = dependentsValues4711412445314544015.tsv   /gp/getFile.jsp?task=&file=cgaadm_deadline/Axis1838998665456051806.att_dependentsValues4711412445314544015.tsv
#    maf2 = 
#    maf3 = dependentsValues5278587052321366115.tsv   /gp/getFile.jsp?task=&file=cgaadm_deadline/Axis582977377055115824.att_dependentsValues5278587052321366115.tsv
#    maf4 = 
#    maflabel1 = Broad
#    maflabel2 = WashU
#    maflabel3 = Baylor
#    maflabel4 = 
#    wig1 = dependentsValues4639174707195597864.tsv   /gp/getFile.jsp?task=&file=cgaadm_deadline/Axis2064464773550483212.att_dependentsValues4639174707195597864.tsv
#    wig2 = 
#    wig3 = dependentsValues4530335783717396429.tsv   /gp/getFile.jsp?task=&file=cgaadm_deadline/Axis5929348364918253978.att_dependentsValues4530335783717396429.tsv
#    wig4 = 
#    build = hg18
#    context65_dir = /xchip/cga1/lawrence/db/context65
#    context65_wig = no_longer_needed
#    num_categories = 4
#    target_list = /xchip/cga1/lawrence/capture/RefSeq_exons_hg18_june2010_fix1.txt
#    paramfile = /xchip/cga1/reference/mutsig_params/MutSig2.0.params.txt
