
R version 2.10.1 (2009-12-14)
Copyright (C) 2009 The R Foundation for Statistical Computing
ISBN 3-900051-07-0

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> source("/xchip/tcga/gdac_prod/applications/tcga-gdac-genepattern/gp-3.2.4-9272/Tomcat/../../taskLib/Correlate_Clinical_Clusters_onlysig.32.3479/Clusters2ClinicalAnalysis_nozzle_onlysig.R")
> result <- main("/xchip/tcga/gdac_prod/applications/tcga-gdac-genepattern/gp-3.2.4-9272/Tomcat/../../taskLib/Correlate_Clinical_Clusters_onlysig.32.3479/", "-nF=/xchip/tcga/Tools/Nozzle/v1.current", "-iD=/xchip/cga/gdac-prod/tcga-gdac/jobResults/GDAC_MergedClusteringPipeline/LAML/1604670/1.GDAC_mergedClustering.Finished/LAML.mergedcluster.txt", "-iC=/xchip/cga/gdac-prod/tcga-gdac/jobResults/GDAC_clinicalDataPickerPipeline/LAML/1620639/1.GDAC_clinicalDataPicker.Finished/LAML.clin.merged.picked.txt", "-fF=ALL", "-fC=3", "-fH=5", "-fW=9", "-fP=OUT", "-cP=0.05", "-cQ=1", "-MF=ALL", "-oT=", "-nV=Nozzle.R1", "-OP=AGGREGRATED_CLUSTER", "-iT=", "-iX=")
[1] "nver"          "-nV=Nozzle.R1"
[1] "nfn"                                 "/xchip/tcga/Tools/Nozzle/v1.current"
[1] "Nozzle.R1"
[1] "successfully load Nozzle.R1"
[1] "ofn"  "-oT="
[1] "opt"                     "-OP=AGGREGRATED_CLUSTER"
[1] "tl"   "-iT="
[1] "dx"   "-iX="
[1] "opt"                 "AGGREGRATED_CLUSTER"
[1] "dx" ""  

nPatients in clinical file=200, in cluster file=197, common to both=197
[1]   5 197
[1] "METHLYATION_CNMF"
[1] 3
 1  2  3  4  5  6  7 
45 19 23 30 48 18  9 
 1  2  3  4  5  6  7 
45 19 23 30 48 18  9 
[1] "MRNASEQ_CNMF"
[1] 3
 1  2  3 
74 57 48 
 1  2  3 
74 57 48 
[1] "MRNASEQ_CHIERARCHICAL"
[1] 3
  1   2 
 61 118 
  1   2 
 61 118 
[1] "MIRSEQ_CNMF"
[1] 3
 1  2  3 
86 40 61 
 1  2  3 
86 40 61 
[1] "MIRSEQ_CHIERARCHICAL"
[1] 3
 1  2  3 
38 82 67 
 1  2  3 
38 82 67 
[1] "data2feature, selection=ALL"
 [1] "YEARSTOBIRTH"                     "DAYSTODEATH"                     
 [3] "DAYSTOLASTFOLLOWUP"               "VITALSTATUS"                     
 [5] "DCCUPLOADDATE"                    "PRIMARYSITEOFDESEASE"            
 [7] "GENDER"                           "DATEOFINITIALPATHOLOGICDIAGNOSIS"
 [9] "DAYSTOLASTKNOWNALIVE"             "KARNOFSKYPERFORMANCESCORE"       
[11] "BATCHNUMBER"                     

Input Data has 11 rows and 197 columns.

[1] "Batch" "11"   
[1] "Last Follow UP"
TCGA-AB-2802 TCGA-AB-2803 TCGA-AB-2804 TCGA-AB-2805 TCGA-AB-2806 TCGA-AB-2807 
          NA           NA         2556           NA           NA           NA 
TCGA-AB-2808 TCGA-AB-2809 TCGA-AB-2810 TCGA-AB-2811 TCGA-AB-2812 TCGA-AB-2813 
        2861           NA           NA           NA           NA           NA 
TCGA-AB-2814 TCGA-AB-2815 TCGA-AB-2816 TCGA-AB-2817 TCGA-AB-2818 TCGA-AB-2819 
          NA           NA           NA           NA           NA         2496 
TCGA-AB-2820 TCGA-AB-2821 TCGA-AB-2822 TCGA-AB-2823 TCGA-AB-2824 TCGA-AB-2825 
          NA           NA           NA           NA           NA           NA 
TCGA-AB-2826 TCGA-AB-2827 TCGA-AB-2828 TCGA-AB-2829 TCGA-AB-2830 TCGA-AB-2831 
          NA           NA         2284           NA           NA           NA 
TCGA-AB-2832 TCGA-AB-2833 TCGA-AB-2834 TCGA-AB-2835 TCGA-AB-2836 TCGA-AB-2837 
          NA           NA           NA         1673           NA           NA 
TCGA-AB-2838 TCGA-AB-2839 TCGA-AB-2840 TCGA-AB-2841 TCGA-AB-2842 TCGA-AB-2843 
          NA           NA           NA           NA           NA           NA 
TCGA-AB-2844 TCGA-AB-2845 TCGA-AB-2846 TCGA-AB-2847 TCGA-AB-2848 TCGA-AB-2849 
          NA           NA           NA           NA           NA         2220 
TCGA-AB-2851 TCGA-AB-2853 TCGA-AB-2854 TCGA-AB-2855 TCGA-AB-2856 TCGA-AB-2857 
          NA           NA           NA           NA           NA           NA 
TCGA-AB-2858 TCGA-AB-2859 TCGA-AB-2860 TCGA-AB-2861 TCGA-AB-2862 TCGA-AB-2863 
          NA           NA           NA           NA         1430           NA 
TCGA-AB-2865 TCGA-AB-2866 TCGA-AB-2867 TCGA-AB-2868 TCGA-AB-2869 TCGA-AB-2870 
          NA           NA           NA           NA          243           NA 
TCGA-AB-2871 TCGA-AB-2872 TCGA-AB-2873 TCGA-AB-2874 TCGA-AB-2875 TCGA-AB-2876 
         153          638          273          396          212         1219 
TCGA-AB-2877 TCGA-AB-2878 TCGA-AB-2879 TCGA-AB-2880 TCGA-AB-2881 TCGA-AB-2882 
         638           NA          245          424          393           NA 
TCGA-AB-2883 TCGA-AB-2884 TCGA-AB-2885 TCGA-AB-2886 TCGA-AB-2887 TCGA-AB-2888 
         730           NA           NA          181           NA          334 
TCGA-AB-2889 TCGA-AB-2890 TCGA-AB-2891 TCGA-AB-2892 TCGA-AB-2893 TCGA-AB-2894 
         304           NA           NA          942           NA           NA 
TCGA-AB-2895 TCGA-AB-2896 TCGA-AB-2897 TCGA-AB-2898 TCGA-AB-2899 TCGA-AB-2900 
          NA           NA          243          393           NA           NA 
TCGA-AB-2901 TCGA-AB-2903 TCGA-AB-2904 TCGA-AB-2906 TCGA-AB-2907 TCGA-AB-2908 
          58           NA           NA          577           NA           NA 
TCGA-AB-2909 TCGA-AB-2910 TCGA-AB-2911 TCGA-AB-2912 TCGA-AB-2913 TCGA-AB-2914 
          30           NA         1186           NA         1216          792 
TCGA-AB-2915 TCGA-AB-2916 TCGA-AB-2917 TCGA-AB-2918 TCGA-AB-2919 TCGA-AB-2920 
          NA          882         1216           NA           61           NA 
TCGA-AB-2921 TCGA-AB-2922 TCGA-AB-2923 TCGA-AB-2924 TCGA-AB-2925 TCGA-AB-2926 
          NA           NA           NA           90           NA           NA 
TCGA-AB-2927 TCGA-AB-2928 TCGA-AB-2929 TCGA-AB-2930 TCGA-AB-2931 TCGA-AB-2932 
          NA           59           NA           NA           NA           NA 
TCGA-AB-2933 TCGA-AB-2934 TCGA-AB-2935 TCGA-AB-2936 TCGA-AB-2937 TCGA-AB-2938 
          NA           28           NA           59           NA           NA 
TCGA-AB-2939 TCGA-AB-2940 TCGA-AB-2941 TCGA-AB-2942 TCGA-AB-2943 TCGA-AB-2944 
         455           NA           NA          641           NA           NA 
TCGA-AB-2945 TCGA-AB-2946 TCGA-AB-2947 TCGA-AB-2948 TCGA-AB-2949 TCGA-AB-2950 
          NA           NA           31           NA          699          306 
TCGA-AB-2952 TCGA-AB-2954 TCGA-AB-2955 TCGA-AB-2956 TCGA-AB-2957 TCGA-AB-2959 
          NA         1492           NA           NA          608           NA 
TCGA-AB-2963 TCGA-AB-2964 TCGA-AB-2965 TCGA-AB-2966 TCGA-AB-2967 TCGA-AB-2968 
          NA         1277           NA           NA         1035           NA 
TCGA-AB-2969 TCGA-AB-2970 TCGA-AB-2971 TCGA-AB-2972 TCGA-AB-2973 TCGA-AB-2974 
        1127           NA           NA           NA           NA           NA 
TCGA-AB-2975 TCGA-AB-2976 TCGA-AB-2977 TCGA-AB-2978 TCGA-AB-2979 TCGA-AB-2980 
          NA           NA           NA          699          671          699 
TCGA-AB-2981 TCGA-AB-2982 TCGA-AB-2983 TCGA-AB-2984 TCGA-AB-2985 TCGA-AB-2986 
         487          149           NA         1156           NA           NA 
TCGA-AB-2987 TCGA-AB-2988 TCGA-AB-2989 TCGA-AB-2990 TCGA-AB-2991 TCGA-AB-2992 
          NA           NA           NA          457         1826           NA 
TCGA-AB-2993 TCGA-AB-2994 TCGA-AB-2995 TCGA-AB-2996 TCGA-AB-2997 TCGA-AB-2998 
          NA         1798         1551         1581           NA           NA 
TCGA-AB-2999 TCGA-AB-3000 TCGA-AB-3001 TCGA-AB-3002 TCGA-AB-3005 TCGA-AB-3006 
        1734         1249         1581           NA         2099           NA 
TCGA-AB-3007 TCGA-AB-3008 TCGA-AB-3009 TCGA-AB-3011 TCGA-AB-3012 
        1581           NA           NA         1885         1887 
Variable 1:'AGE':	nDistinctValues=63,	numeric=TRUE,	binary=FALSE,	exclude=FALSE.
Variable 2:'DAYSTODEATH':	nDistinctValues=66,	numeric=TRUE,	binary=FALSE,	exclude=TRUE.
Variable 3:'DAYSTOLASTFOLLOWUP':	nDistinctValues=58,	numeric=TRUE,	binary=FALSE,	exclude=TRUE.
Variable 4:'VITALSTATUS':	nDistinctValues=2,	numeric=TRUE,	binary=TRUE,	exclude=FALSE.
Variable 5:'DCCUPLOADDAY':	nDistinctValues=1,	numeric=FALSE,	binary=FALSE,	exclude=TRUE.
Variable 6:'PRIMARY.SITE.OF.DISEASE':	nDistinctValues=2,	numeric=FALSE,	binary=FALSE,	exclude=TRUE.
Variable 7:'GENDER':	nDistinctValues=2,	numeric=FALSE,	binary=FALSE,	exclude=FALSE.
Variable 8:'DAYOFINITIALPATHOLOGICDIAGNOSIS':	nDistinctValues=10,	numeric=TRUE,	binary=FALSE,	exclude=TRUE.
Variable 9:'DAYSTOLASTKNOWNALIVE':	nDistinctValues=0,	numeric=FALSE,	binary=FALSE,	exclude=TRUE.
Variable 10:'KARNOFSKY.PERFORMANCE.SCORE':	nDistinctValues=0,	numeric=FALSE,	binary=FALSE,	exclude=TRUE.
Variable 11:'BATCH.NUMBER':	nDistinctValues=1,	numeric=FALSE,	binary=FALSE,	exclude=TRUE.
[1] "rownames(nsurv.mat)"
[1] "AGE"    "GENDER"
[1] "TUMOR.?STAGE"
[1] "TUMOR.?GRADE"
[1] "PATHOLOGY.T"
[1] "PATHOLOGY.N"
Output Data has 197 columns, 1 survival variables, and 2 non-survival variables.
AGE, nv=63, binary=FALSE, numeric=TRUE
GENDER, nv=2, binary=FALSE, numeric=FALSE

Clustering(1) Variable = METHLYATION_CNMF
D1V1, survival
  [1] "subtype1" "subtype2" "subtype2" "subtype3" "subtype4" "subtype5"
  [7] "subtype4" "subtype6" "subtype3" "subtype1" "subtype1" "subtype5"
 [13] "subtype5" "subtype4" "subtype1" "subtype5" "subtype1" "subtype4"
 [19] "subtype3" "subtype3" "subtype1" "subtype6" "subtype3" "subtype7"
 [25] "subtype4" "subtype5" "subtype5" "subtype5" "subtype6" "subtype6"
 [31] "subtype1" "subtype1" "subtype1" "subtype5" "subtype1" "subtype2"
 [37] "subtype2" "subtype5" "subtype1" "subtype4" "subtype4" "subtype5"
 [43] "subtype1" "subtype7" "subtype1" "subtype6" "subtype5" "subtype7"
 [49] "subtype1" "subtype5" "subtype4" "subtype5" "subtype2" "subtype3"
 [55] "subtype3" "subtype3" "subtype5" "subtype1" "subtype4" "subtype5"
 [61] "subtype2" "subtype5" "subtype3" "subtype4" "subtype4" "subtype3"
 [67] "subtype5" "subtype1" "subtype4" "subtype4" "subtype5" "subtype6"
 [73] "subtype1" "subtype5" "subtype4" "subtype4" "subtype4" "subtype4"
 [79] "subtype6" "subtype6" "subtype1" "subtype1" "subtype2" "subtype5"
 [85] "subtype5" "subtype3" "subtype3" "subtype5" "subtype2" "subtype5"
 [91] "subtype4" "subtype1" "subtype1" "subtype4" "subtype6" "subtype5"
 [97] "subtype3" "subtype5" "subtype1" "subtype1" "subtype6" "subtype3"
[103] "subtype5" "subtype5" "subtype5" "subtype5" "subtype5" "subtype5"
[109] "subtype3" "subtype4" "subtype5" "subtype7" "subtype4" "subtype1"
[115] "subtype1" "subtype5" "subtype5" "subtype4" "subtype5" "subtype4"
[121] "subtype4" "subtype6" "subtype4" "subtype3" "subtype1" "subtype1"
[127] "subtype1" "subtype7" "subtype1" "subtype5" "subtype1" "subtype7"
[133] "subtype2" "subtype1" "subtype1" "subtype1" "subtype1" "subtype3"
[139] "subtype5" "subtype4" "subtype2" "subtype6" "subtype2" "subtype5"
[145] "subtype3" "subtype6" "subtype1" "subtype6" "subtype1" "subtype1"
[151] "subtype3" "subtype2" "subtype3" "subtype1" "subtype5" "subtype5"
[157] "subtype2" "subtype2" "subtype4" "subtype2" "subtype3" "subtype6"
[163] "subtype1" "subtype2" "subtype4" "subtype7" "subtype1" "subtype2"
  [1] "subtype1" "subtype2" "subtype2" "subtype3" "subtype4" "subtype5"
  [7] "subtype4" "subtype6" "subtype3" "subtype1" "subtype1" "subtype5"
 [13] "subtype5" "subtype4" "subtype1" "subtype5" "subtype1" "subtype4"
 [19] "subtype3" "subtype3" "subtype1" "subtype6" "subtype3" "subtype7"
 [25] "subtype4" "subtype5" "subtype5" "subtype5" "subtype6" "subtype6"
 [31] "subtype1" "subtype1" "subtype1" "subtype5" "subtype1" "subtype2"
 [37] "subtype2" "subtype5" "subtype1" "subtype4" "subtype4" "subtype5"
 [43] "subtype1" "subtype7" "subtype1" "subtype6" "subtype5" "subtype7"
 [49] "subtype1" "subtype5" "subtype4" "subtype5" "subtype2" "subtype3"
 [55] "subtype3" "subtype3" "subtype5" "subtype1" "subtype4" "subtype5"
 [61] "subtype2" "subtype5" "subtype3" "subtype4" "subtype4" "subtype3"
 [67] "subtype5" "subtype1" "subtype4" "subtype4" "subtype5" "subtype6"
 [73] "subtype1" "subtype5" "subtype4" "subtype4" "subtype4" "subtype4"
 [79] "subtype6" "subtype6" "subtype1" "subtype1" "subtype2" "subtype5"
 [85] "subtype5" "subtype3" "subtype3" "subtype5" "subtype2" "subtype5"
 [91] "subtype4" "subtype1" "subtype1" "subtype4" "subtype6" "subtype5"
 [97] "subtype3" "subtype5" "subtype1" "subtype1" "subtype6" "subtype3"
[103] "subtype5" "subtype5" "subtype5" "subtype5" "subtype5" "subtype5"
[109] "subtype3" "subtype4" "subtype5" "subtype7" "subtype4" "subtype1"
[115] "subtype1" "subtype5" "subtype5" "subtype4" "subtype5" "subtype4"
[121] "subtype4" "subtype6" "subtype4" "subtype3" "subtype1" "subtype1"
[127] "subtype1" "subtype7" "subtype1" "subtype5" "subtype1" "subtype7"
[133] "subtype2" "subtype1" "subtype1" "subtype1" "subtype1" "subtype3"
[139] "subtype5" "subtype4" "subtype2" "subtype6" "subtype2" "subtype5"
[145] "subtype3" "subtype6" "subtype1" "subtype6" "subtype1" "subtype1"
[151] "subtype3" "subtype2" "subtype3" "subtype1" "subtype5" "subtype5"
[157] "subtype2" "subtype2" "subtype4" "subtype2" "subtype3" "subtype6"
[163] "subtype1" "subtype2" "subtype4" "subtype7" "subtype1" "subtype2"
  [1] "subtype1" "subtype2" "subtype2" "subtype3" "subtype4" "subtype5"
  [7] "subtype4" "subtype6" "subtype3" "subtype1" "subtype1" "subtype5"
 [13] "subtype5" "subtype4" "subtype1" "subtype5" "subtype1" "subtype4"
 [19] "subtype3" "subtype3" "subtype1" "subtype6" "subtype3" "subtype7"
 [25] "subtype4" "subtype5" "subtype5" "subtype5" "subtype6" "subtype6"
 [31] "subtype1" "subtype1" "subtype1" "subtype5" "subtype1" "subtype2"
 [37] "subtype2" "subtype5" "subtype1" "subtype4" "subtype4" "subtype5"
 [43] "subtype1" "subtype7" "subtype1" "subtype6" "subtype5" "subtype7"
 [49] "subtype1" "subtype5" "subtype4" "subtype5" "subtype2" "subtype3"
 [55] "subtype3" "subtype3" "subtype5" "subtype1" "subtype4" "subtype5"
 [61] "subtype2" "subtype5" "subtype3" "subtype4" "subtype4" "subtype3"
 [67] "subtype5" "subtype1" "subtype4" "subtype4" "subtype5" "subtype6"
 [73] "subtype1" "subtype5" "subtype4" "subtype4" "subtype4" "subtype4"
 [79] "subtype6" "subtype6" "subtype1" "subtype1" "subtype2" "subtype5"
 [85] "subtype5" "subtype3" "subtype3" "subtype5" "subtype2" "subtype5"
 [91] "subtype4" "subtype1" "subtype1" "subtype4" "subtype6" "subtype5"
 [97] "subtype3" "subtype5" "subtype1" "subtype1" "subtype6" "subtype3"
[103] "subtype5" "subtype5" "subtype5" "subtype5" "subtype5" "subtype5"
[109] "subtype3" "subtype4" "subtype5" "subtype7" "subtype4" "subtype1"
[115] "subtype1" "subtype5" "subtype5" "subtype4" "subtype5" "subtype4"
[121] "subtype4" "subtype6" "subtype4" "subtype3" "subtype1" "subtype1"
[127] "subtype1" "subtype7" "subtype1" "subtype5" "subtype1" "subtype7"
[133] "subtype2" "subtype1" "subtype1" "subtype1" "subtype1" "subtype3"
[139] "subtype5" "subtype4" "subtype2" "subtype6" "subtype2" "subtype5"
[145] "subtype3" "subtype6" "subtype1" "subtype6" "subtype1" "subtype1"
[151] "subtype3" "subtype2" "subtype3" "subtype1" "subtype5" "subtype5"
[157] "subtype2" "subtype2" "subtype4" "subtype2" "subtype3" "subtype6"
[163] "subtype1" "subtype2" "subtype4" "subtype7" "subtype1" "subtype2"
D1V2, continuous
D1V3, binary
[1] "tbl2"
          cls
clus       [,1] [,2]
  subtype1   22   23
  subtype2    8   11
  subtype3   14    9
  subtype4   14   16
  subtype5   29   19
  subtype6    9    9
  subtype7    7    2

Clustering(2) Variable = MRNASEQ_CNMF
D2V1, survival
  [1] "subtype1" "subtype2" "subtype1" "subtype1" "subtype1" "subtype3"
  [7] "subtype3" "subtype3" "subtype2" "subtype1" "subtype2" "subtype2"
 [13] "subtype1" "subtype2" "subtype1" "subtype1" "subtype1" "subtype2"
 [19] "subtype2" "subtype2" "subtype2" "subtype3" "subtype2" "subtype2"
 [25] "subtype2" "subtype2" "subtype2" "subtype1" "subtype3" "subtype3"
 [31] "subtype3" "subtype1" "subtype2" "subtype1" "subtype2" "subtype1"
 [37] "subtype3" "subtype1" "subtype2" "subtype3" "subtype1" "subtype3"
 [43] "subtype2" "subtype1" "subtype1" "subtype3" "subtype1" "subtype3"
 [49] "subtype1" "subtype2" "subtype2" "subtype1" "subtype1" "subtype3"
 [55] "subtype2" "subtype3" "subtype1" "subtype2" "subtype3" "subtype1"
 [61] "subtype1" "subtype3" "subtype1" "subtype3" "subtype2" "subtype2"
 [67] "subtype1" "subtype1" "subtype2" "subtype1" "subtype1" "subtype2"
 [73] "subtype2" "subtype2" "subtype2" "subtype3" "subtype3" "subtype3"
 [79] "subtype3" "subtype1" "subtype1" "subtype2" "subtype1" "subtype1"
 [85] "subtype1" "subtype1" "subtype2" "subtype2" "subtype3" "subtype2"
 [91] "subtype2" "subtype1" "subtype3" "subtype3" "subtype2" "subtype2"
 [97] "subtype1" "subtype3" "subtype1" "subtype2" "subtype2" "subtype1"
[103] "subtype1" "subtype1" "subtype1" "subtype1" "subtype2" "subtype2"
[109] "subtype1" "subtype1" "subtype1" "subtype2" "subtype1" "subtype2"
[115] "subtype1" "subtype3" "subtype1" "subtype2" "subtype1" "subtype2"
[121] "subtype2" "subtype1" "subtype3" "subtype3" "subtype2" "subtype3"
[127] "subtype3" "subtype1" "subtype1" "subtype1" "subtype2" "subtype1"
[133] "subtype1" "subtype3" "subtype2" "subtype3" "subtype2" "subtype3"
[139] "subtype3" "subtype1" "subtype1" "subtype3" "subtype3" "subtype1"
[145] "subtype1" "subtype3" "subtype1" "subtype1" "subtype1" "subtype1"
[151] "subtype2" "subtype3" "subtype3" "subtype1" "subtype1" "subtype3"
[157] "subtype1"
  [1] "subtype1" "subtype2" "subtype1" "subtype1" "subtype1" "subtype3"
  [7] "subtype3" "subtype3" "subtype2" "subtype1" "subtype2" "subtype2"
 [13] "subtype1" "subtype2" "subtype1" "subtype1" "subtype1" "subtype2"
 [19] "subtype2" "subtype2" "subtype2" "subtype3" "subtype2" "subtype2"
 [25] "subtype2" "subtype2" "subtype2" "subtype1" "subtype3" "subtype3"
 [31] "subtype3" "subtype1" "subtype2" "subtype1" "subtype2" "subtype1"
 [37] "subtype3" "subtype1" "subtype2" "subtype3" "subtype1" "subtype3"
 [43] "subtype2" "subtype1" "subtype1" "subtype3" "subtype1" "subtype3"
 [49] "subtype1" "subtype2" "subtype2" "subtype1" "subtype1" "subtype3"
 [55] "subtype2" "subtype3" "subtype1" "subtype2" "subtype3" "subtype1"
 [61] "subtype1" "subtype3" "subtype1" "subtype3" "subtype2" "subtype2"
 [67] "subtype1" "subtype1" "subtype2" "subtype1" "subtype1" "subtype2"
 [73] "subtype2" "subtype2" "subtype2" "subtype3" "subtype3" "subtype3"
 [79] "subtype3" "subtype1" "subtype1" "subtype2" "subtype1" "subtype1"
 [85] "subtype1" "subtype1" "subtype2" "subtype2" "subtype3" "subtype2"
 [91] "subtype2" "subtype1" "subtype3" "subtype3" "subtype2" "subtype2"
 [97] "subtype1" "subtype3" "subtype1" "subtype2" "subtype2" "subtype1"
[103] "subtype1" "subtype1" "subtype1" "subtype1" "subtype2" "subtype2"
[109] "subtype1" "subtype1" "subtype1" "subtype2" "subtype1" "subtype2"
[115] "subtype1" "subtype3" "subtype1" "subtype2" "subtype1" "subtype2"
[121] "subtype2" "subtype1" "subtype3" "subtype3" "subtype2" "subtype3"
[127] "subtype3" "subtype1" "subtype1" "subtype1" "subtype2" "subtype1"
[133] "subtype1" "subtype3" "subtype2" "subtype3" "subtype2" "subtype3"
[139] "subtype3" "subtype1" "subtype1" "subtype3" "subtype3" "subtype1"
[145] "subtype1" "subtype3" "subtype1" "subtype1" "subtype1" "subtype1"
[151] "subtype2" "subtype3" "subtype3" "subtype1" "subtype1" "subtype3"
[157] "subtype1"
  [1] "subtype1" "subtype2" "subtype1" "subtype1" "subtype1" "subtype3"
  [7] "subtype3" "subtype3" "subtype2" "subtype1" "subtype2" "subtype2"
 [13] "subtype1" "subtype2" "subtype1" "subtype1" "subtype1" "subtype2"
 [19] "subtype2" "subtype2" "subtype2" "subtype3" "subtype2" "subtype2"
 [25] "subtype2" "subtype2" "subtype2" "subtype1" "subtype3" "subtype3"
 [31] "subtype3" "subtype1" "subtype2" "subtype1" "subtype2" "subtype1"
 [37] "subtype3" "subtype1" "subtype2" "subtype3" "subtype1" "subtype3"
 [43] "subtype2" "subtype1" "subtype1" "subtype3" "subtype1" "subtype3"
 [49] "subtype1" "subtype2" "subtype2" "subtype1" "subtype1" "subtype3"
 [55] "subtype2" "subtype3" "subtype1" "subtype2" "subtype3" "subtype1"
 [61] "subtype1" "subtype3" "subtype1" "subtype3" "subtype2" "subtype2"
 [67] "subtype1" "subtype1" "subtype2" "subtype1" "subtype1" "subtype2"
 [73] "subtype2" "subtype2" "subtype2" "subtype3" "subtype3" "subtype3"
 [79] "subtype3" "subtype1" "subtype1" "subtype2" "subtype1" "subtype1"
 [85] "subtype1" "subtype1" "subtype2" "subtype2" "subtype3" "subtype2"
 [91] "subtype2" "subtype1" "subtype3" "subtype3" "subtype2" "subtype2"
 [97] "subtype1" "subtype3" "subtype1" "subtype2" "subtype2" "subtype1"
[103] "subtype1" "subtype1" "subtype1" "subtype1" "subtype2" "subtype2"
[109] "subtype1" "subtype1" "subtype1" "subtype2" "subtype1" "subtype2"
[115] "subtype1" "subtype3" "subtype1" "subtype2" "subtype1" "subtype2"
[121] "subtype2" "subtype1" "subtype3" "subtype3" "subtype2" "subtype3"
[127] "subtype3" "subtype1" "subtype1" "subtype1" "subtype2" "subtype1"
[133] "subtype1" "subtype3" "subtype2" "subtype3" "subtype2" "subtype3"
[139] "subtype3" "subtype1" "subtype1" "subtype3" "subtype3" "subtype1"
[145] "subtype1" "subtype3" "subtype1" "subtype1" "subtype1" "subtype1"
[151] "subtype2" "subtype3" "subtype3" "subtype1" "subtype1" "subtype3"
[157] "subtype1"
D2V2, continuous
D2V3, binary
[1] "tbl2"
          cls
clus       [,1] [,2]
  subtype1   33   41
  subtype2   24   33
  subtype3   27   21
        clus
vv       subtype1 subtype2 subtype3
  FEMALE       33       24       27
  MALE         41       33       21

Clustering(3) Variable = MRNASEQ_CHIERARCHICAL
D3V1, survival
  [1] "subtype2" "subtype1" "subtype2" "subtype2" "subtype2" "subtype2"
  [7] "subtype1" "subtype2" "subtype2" "subtype2" "subtype1" "subtype1"
 [13] "subtype2" "subtype1" "subtype2" "subtype2" "subtype2" "subtype1"
 [19] "subtype1" "subtype1" "subtype1" "subtype2" "subtype1" "subtype1"
 [25] "subtype1" "subtype1" "subtype1" "subtype2" "subtype2" "subtype2"
 [31] "subtype2" "subtype2" "subtype1" "subtype2" "subtype1" "subtype2"
 [37] "subtype1" "subtype2" "subtype1" "subtype2" "subtype2" "subtype2"
 [43] "subtype1" "subtype2" "subtype2" "subtype2" "subtype2" "subtype2"
 [49] "subtype2" "subtype1" "subtype1" "subtype2" "subtype2" "subtype2"
 [55] "subtype1" "subtype2" "subtype2" "subtype1" "subtype2" "subtype2"
 [61] "subtype2" "subtype2" "subtype2" "subtype2" "subtype2" "subtype1"
 [67] "subtype2" "subtype1" "subtype1" "subtype2" "subtype2" "subtype1"
 [73] "subtype1" "subtype1" "subtype1" "subtype1" "subtype2" "subtype2"
 [79] "subtype2" "subtype2" "subtype2" "subtype1" "subtype2" "subtype2"
 [85] "subtype2" "subtype2" "subtype1" "subtype2" "subtype2" "subtype1"
 [91] "subtype1" "subtype2" "subtype2" "subtype2" "subtype1" "subtype1"
 [97] "subtype2" "subtype2" "subtype2" "subtype2" "subtype1" "subtype2"
[103] "subtype2" "subtype2" "subtype2" "subtype2" "subtype1" "subtype2"
[109] "subtype2" "subtype2" "subtype2" "subtype1" "subtype2" "subtype1"
[115] "subtype2" "subtype1" "subtype2" "subtype1" "subtype2" "subtype1"
[121] "subtype1" "subtype2" "subtype1" "subtype2" "subtype1" "subtype2"
[127] "subtype1" "subtype2" "subtype2" "subtype2" "subtype1" "subtype2"
[133] "subtype2" "subtype2" "subtype1" "subtype2" "subtype1" "subtype2"
[139] "subtype2" "subtype2" "subtype2" "subtype2" "subtype2" "subtype2"
[145] "subtype2" "subtype2" "subtype2" "subtype2" "subtype2" "subtype2"
[151] "subtype1" "subtype2" "subtype2" "subtype2" "subtype2" "subtype2"
[157] "subtype2"
  [1] "subtype2" "subtype1" "subtype2" "subtype2" "subtype2" "subtype2"
  [7] "subtype1" "subtype2" "subtype2" "subtype2" "subtype1" "subtype1"
 [13] "subtype2" "subtype1" "subtype2" "subtype2" "subtype2" "subtype1"
 [19] "subtype1" "subtype1" "subtype1" "subtype2" "subtype1" "subtype1"
 [25] "subtype1" "subtype1" "subtype1" "subtype2" "subtype2" "subtype2"
 [31] "subtype2" "subtype2" "subtype1" "subtype2" "subtype1" "subtype2"
 [37] "subtype1" "subtype2" "subtype1" "subtype2" "subtype2" "subtype2"
 [43] "subtype1" "subtype2" "subtype2" "subtype2" "subtype2" "subtype2"
 [49] "subtype2" "subtype1" "subtype1" "subtype2" "subtype2" "subtype2"
 [55] "subtype1" "subtype2" "subtype2" "subtype1" "subtype2" "subtype2"
 [61] "subtype2" "subtype2" "subtype2" "subtype2" "subtype2" "subtype1"
 [67] "subtype2" "subtype1" "subtype1" "subtype2" "subtype2" "subtype1"
 [73] "subtype1" "subtype1" "subtype1" "subtype1" "subtype2" "subtype2"
 [79] "subtype2" "subtype2" "subtype2" "subtype1" "subtype2" "subtype2"
 [85] "subtype2" "subtype2" "subtype1" "subtype2" "subtype2" "subtype1"
 [91] "subtype1" "subtype2" "subtype2" "subtype2" "subtype1" "subtype1"
 [97] "subtype2" "subtype2" "subtype2" "subtype2" "subtype1" "subtype2"
[103] "subtype2" "subtype2" "subtype2" "subtype2" "subtype1" "subtype2"
[109] "subtype2" "subtype2" "subtype2" "subtype1" "subtype2" "subtype1"
[115] "subtype2" "subtype1" "subtype2" "subtype1" "subtype2" "subtype1"
[121] "subtype1" "subtype2" "subtype1" "subtype2" "subtype1" "subtype2"
[127] "subtype1" "subtype2" "subtype2" "subtype2" "subtype1" "subtype2"
[133] "subtype2" "subtype2" "subtype1" "subtype2" "subtype1" "subtype2"
[139] "subtype2" "subtype2" "subtype2" "subtype2" "subtype2" "subtype2"
[145] "subtype2" "subtype2" "subtype2" "subtype2" "subtype2" "subtype2"
[151] "subtype1" "subtype2" "subtype2" "subtype2" "subtype2" "subtype2"
[157] "subtype2"
  [1] "subtype2" "subtype1" "subtype2" "subtype2" "subtype2" "subtype2"
  [7] "subtype1" "subtype2" "subtype2" "subtype2" "subtype1" "subtype1"
 [13] "subtype2" "subtype1" "subtype2" "subtype2" "subtype2" "subtype1"
 [19] "subtype1" "subtype1" "subtype1" "subtype2" "subtype1" "subtype1"
 [25] "subtype1" "subtype1" "subtype1" "subtype2" "subtype2" "subtype2"
 [31] "subtype2" "subtype2" "subtype1" "subtype2" "subtype1" "subtype2"
 [37] "subtype1" "subtype2" "subtype1" "subtype2" "subtype2" "subtype2"
 [43] "subtype1" "subtype2" "subtype2" "subtype2" "subtype2" "subtype2"
 [49] "subtype2" "subtype1" "subtype1" "subtype2" "subtype2" "subtype2"
 [55] "subtype1" "subtype2" "subtype2" "subtype1" "subtype2" "subtype2"
 [61] "subtype2" "subtype2" "subtype2" "subtype2" "subtype2" "subtype1"
 [67] "subtype2" "subtype1" "subtype1" "subtype2" "subtype2" "subtype1"
 [73] "subtype1" "subtype1" "subtype1" "subtype1" "subtype2" "subtype2"
 [79] "subtype2" "subtype2" "subtype2" "subtype1" "subtype2" "subtype2"
 [85] "subtype2" "subtype2" "subtype1" "subtype2" "subtype2" "subtype1"
 [91] "subtype1" "subtype2" "subtype2" "subtype2" "subtype1" "subtype1"
 [97] "subtype2" "subtype2" "subtype2" "subtype2" "subtype1" "subtype2"
[103] "subtype2" "subtype2" "subtype2" "subtype2" "subtype1" "subtype2"
[109] "subtype2" "subtype2" "subtype2" "subtype1" "subtype2" "subtype1"
[115] "subtype2" "subtype1" "subtype2" "subtype1" "subtype2" "subtype1"
[121] "subtype1" "subtype2" "subtype1" "subtype2" "subtype1" "subtype2"
[127] "subtype1" "subtype2" "subtype2" "subtype2" "subtype1" "subtype2"
[133] "subtype2" "subtype2" "subtype1" "subtype2" "subtype1" "subtype2"
[139] "subtype2" "subtype2" "subtype2" "subtype2" "subtype2" "subtype2"
[145] "subtype2" "subtype2" "subtype2" "subtype2" "subtype2" "subtype2"
[151] "subtype1" "subtype2" "subtype2" "subtype2" "subtype2" "subtype2"
[157] "subtype2"
[1] "hr=" "1.1"
D3V2, continuous
D3V3, binary
[1] "tbl2"
          cls
clus       [,1] [,2]
  subtype1   29   32
  subtype2   55   63
        clus
vv       subtype1 subtype2
  FEMALE       29       55
  MALE         32       63

Clustering(4) Variable = MIRSEQ_CNMF
D4V1, survival
  [1] "subtype1" "subtype2" "subtype3" "subtype3" "subtype3" "subtype3"
  [7] "subtype1" "subtype1" "subtype1" "subtype3" "subtype1" "subtype3"
 [13] "subtype1" "subtype3" "subtype1" "subtype3" "subtype2" "subtype1"
 [19] "subtype1" "subtype1" "subtype1" "subtype3" "subtype1" "subtype1"
 [25] "subtype3" "subtype1" "subtype1" "subtype1" "subtype2" "subtype1"
 [31] "subtype2" "subtype2" "subtype2" "subtype1" "subtype3" "subtype3"
 [37] "subtype2" "subtype1" "subtype1" "subtype1" "subtype1" "subtype3"
 [43] "subtype1" "subtype1" "subtype2" "subtype3" "subtype1" "subtype2"
 [49] "subtype3" "subtype1" "subtype2" "subtype1" "subtype2" "subtype2"
 [55] "subtype1" "subtype3" "subtype1" "subtype2" "subtype1" "subtype2"
 [61] "subtype3" "subtype3" "subtype1" "subtype2" "subtype1" "subtype3"
 [67] "subtype3" "subtype3" "subtype1" "subtype1" "subtype2" "subtype3"
 [73] "subtype2" "subtype3" "subtype3" "subtype1" "subtype1" "subtype1"
 [79] "subtype2" "subtype2" "subtype1" "subtype1" "subtype3" "subtype1"
 [85] "subtype3" "subtype3" "subtype1" "subtype3" "subtype1" "subtype3"
 [91] "subtype3" "subtype2" "subtype1" "subtype1" "subtype1" "subtype1"
 [97] "subtype1" "subtype3" "subtype3" "subtype3" "subtype2" "subtype1"
[103] "subtype1" "subtype2" "subtype3" "subtype3" "subtype3" "subtype2"
[109] "subtype3" "subtype1" "subtype1" "subtype2" "subtype2" "subtype3"
[115] "subtype2" "subtype3" "subtype3" "subtype1" "subtype3" "subtype3"
[121] "subtype1" "subtype3" "subtype1" "subtype1" "subtype1" "subtype1"
[127] "subtype3" "subtype1" "subtype1" "subtype1" "subtype1" "subtype1"
[133] "subtype2" "subtype3" "subtype2" "subtype1" "subtype2" "subtype3"
[139] "subtype1" "subtype1" "subtype1" "subtype1" "subtype1" "subtype1"
[145] "subtype1" "subtype2" "subtype1" "subtype1" "subtype2" "subtype2"
[151] "subtype3" "subtype3" "subtype2" "subtype3" "subtype2" "subtype3"
[157] "subtype1" "subtype1" "subtype2" "subtype3" "subtype3" "subtype1"
[163] "subtype2"
  [1] "subtype1" "subtype2" "subtype3" "subtype3" "subtype3" "subtype3"
  [7] "subtype1" "subtype1" "subtype1" "subtype3" "subtype1" "subtype3"
 [13] "subtype1" "subtype3" "subtype1" "subtype3" "subtype2" "subtype1"
 [19] "subtype1" "subtype1" "subtype1" "subtype3" "subtype1" "subtype1"
 [25] "subtype3" "subtype1" "subtype1" "subtype1" "subtype2" "subtype1"
 [31] "subtype2" "subtype2" "subtype2" "subtype1" "subtype3" "subtype3"
 [37] "subtype2" "subtype1" "subtype1" "subtype1" "subtype1" "subtype3"
 [43] "subtype1" "subtype1" "subtype2" "subtype3" "subtype1" "subtype2"
 [49] "subtype3" "subtype1" "subtype2" "subtype1" "subtype2" "subtype2"
 [55] "subtype1" "subtype3" "subtype1" "subtype2" "subtype1" "subtype2"
 [61] "subtype3" "subtype3" "subtype1" "subtype2" "subtype1" "subtype3"
 [67] "subtype3" "subtype3" "subtype1" "subtype1" "subtype2" "subtype3"
 [73] "subtype2" "subtype3" "subtype3" "subtype1" "subtype1" "subtype1"
 [79] "subtype2" "subtype2" "subtype1" "subtype1" "subtype3" "subtype1"
 [85] "subtype3" "subtype3" "subtype1" "subtype3" "subtype1" "subtype3"
 [91] "subtype3" "subtype2" "subtype1" "subtype1" "subtype1" "subtype1"
 [97] "subtype1" "subtype3" "subtype3" "subtype3" "subtype2" "subtype1"
[103] "subtype1" "subtype2" "subtype3" "subtype3" "subtype3" "subtype2"
[109] "subtype3" "subtype1" "subtype1" "subtype2" "subtype2" "subtype3"
[115] "subtype2" "subtype3" "subtype3" "subtype1" "subtype3" "subtype3"
[121] "subtype1" "subtype3" "subtype1" "subtype1" "subtype1" "subtype1"
[127] "subtype3" "subtype1" "subtype1" "subtype1" "subtype1" "subtype1"
[133] "subtype2" "subtype3" "subtype2" "subtype1" "subtype2" "subtype3"
[139] "subtype1" "subtype1" "subtype1" "subtype1" "subtype1" "subtype1"
[145] "subtype1" "subtype2" "subtype1" "subtype1" "subtype2" "subtype2"
[151] "subtype3" "subtype3" "subtype2" "subtype3" "subtype2" "subtype3"
[157] "subtype1" "subtype1" "subtype2" "subtype3" "subtype3" "subtype1"
[163] "subtype2"
  [1] "subtype1" "subtype2" "subtype3" "subtype3" "subtype3" "subtype3"
  [7] "subtype1" "subtype1" "subtype1" "subtype3" "subtype1" "subtype3"
 [13] "subtype1" "subtype3" "subtype1" "subtype3" "subtype2" "subtype1"
 [19] "subtype1" "subtype1" "subtype1" "subtype3" "subtype1" "subtype1"
 [25] "subtype3" "subtype1" "subtype1" "subtype1" "subtype2" "subtype1"
 [31] "subtype2" "subtype2" "subtype2" "subtype1" "subtype3" "subtype3"
 [37] "subtype2" "subtype1" "subtype1" "subtype1" "subtype1" "subtype3"
 [43] "subtype1" "subtype1" "subtype2" "subtype3" "subtype1" "subtype2"
 [49] "subtype3" "subtype1" "subtype2" "subtype1" "subtype2" "subtype2"
 [55] "subtype1" "subtype3" "subtype1" "subtype2" "subtype1" "subtype2"
 [61] "subtype3" "subtype3" "subtype1" "subtype2" "subtype1" "subtype3"
 [67] "subtype3" "subtype3" "subtype1" "subtype1" "subtype2" "subtype3"
 [73] "subtype2" "subtype3" "subtype3" "subtype1" "subtype1" "subtype1"
 [79] "subtype2" "subtype2" "subtype1" "subtype1" "subtype3" "subtype1"
 [85] "subtype3" "subtype3" "subtype1" "subtype3" "subtype1" "subtype3"
 [91] "subtype3" "subtype2" "subtype1" "subtype1" "subtype1" "subtype1"
 [97] "subtype1" "subtype3" "subtype3" "subtype3" "subtype2" "subtype1"
[103] "subtype1" "subtype2" "subtype3" "subtype3" "subtype3" "subtype2"
[109] "subtype3" "subtype1" "subtype1" "subtype2" "subtype2" "subtype3"
[115] "subtype2" "subtype3" "subtype3" "subtype1" "subtype3" "subtype3"
[121] "subtype1" "subtype3" "subtype1" "subtype1" "subtype1" "subtype1"
[127] "subtype3" "subtype1" "subtype1" "subtype1" "subtype1" "subtype1"
[133] "subtype2" "subtype3" "subtype2" "subtype1" "subtype2" "subtype3"
[139] "subtype1" "subtype1" "subtype1" "subtype1" "subtype1" "subtype1"
[145] "subtype1" "subtype2" "subtype1" "subtype1" "subtype2" "subtype2"
[151] "subtype3" "subtype3" "subtype2" "subtype3" "subtype2" "subtype3"
[157] "subtype1" "subtype1" "subtype2" "subtype3" "subtype3" "subtype1"
[163] "subtype2"
D4V2, continuous
D4V3, binary
[1] "tbl2"
          cls
clus       [,1] [,2]
  subtype1   47   39
  subtype2   23   17
  subtype3   31   30
        clus
vv       subtype1 subtype2 subtype3
  FEMALE       39       17       30
  MALE         47       23       31

Clustering(5) Variable = MIRSEQ_CHIERARCHICAL
D5V1, survival
  [1] "subtype2" "subtype1" "subtype3" "subtype3" "subtype3" "subtype3"
  [7] "subtype2" "subtype2" "subtype2" "subtype3" "subtype3" "subtype3"
 [13] "subtype2" "subtype3" "subtype2" "subtype3" "subtype1" "subtype2"
 [19] "subtype2" "subtype2" "subtype2" "subtype3" "subtype2" "subtype2"
 [25] "subtype3" "subtype2" "subtype2" "subtype2" "subtype1" "subtype2"
 [31] "subtype1" "subtype1" "subtype1" "subtype2" "subtype3" "subtype3"
 [37] "subtype3" "subtype2" "subtype3" "subtype2" "subtype2" "subtype3"
 [43] "subtype3" "subtype2" "subtype1" "subtype3" "subtype2" "subtype1"
 [49] "subtype3" "subtype2" "subtype1" "subtype2" "subtype1" "subtype1"
 [55] "subtype2" "subtype3" "subtype2" "subtype1" "subtype2" "subtype1"
 [61] "subtype3" "subtype3" "subtype2" "subtype1" "subtype2" "subtype3"
 [67] "subtype3" "subtype3" "subtype2" "subtype2" "subtype1" "subtype3"
 [73] "subtype1" "subtype3" "subtype3" "subtype2" "subtype2" "subtype2"
 [79] "subtype1" "subtype1" "subtype3" "subtype2" "subtype3" "subtype2"
 [85] "subtype3" "subtype3" "subtype2" "subtype3" "subtype2" "subtype3"
 [91] "subtype3" "subtype1" "subtype2" "subtype2" "subtype2" "subtype2"
 [97] "subtype2" "subtype3" "subtype3" "subtype2" "subtype1" "subtype3"
[103] "subtype2" "subtype1" "subtype3" "subtype3" "subtype3" "subtype1"
[109] "subtype3" "subtype2" "subtype2" "subtype3" "subtype1" "subtype3"
[115] "subtype1" "subtype3" "subtype3" "subtype2" "subtype3" "subtype3"
[121] "subtype2" "subtype2" "subtype2" "subtype2" "subtype2" "subtype2"
[127] "subtype3" "subtype2" "subtype2" "subtype2" "subtype2" "subtype3"
[133] "subtype1" "subtype3" "subtype1" "subtype2" "subtype3" "subtype3"
[139] "subtype2" "subtype2" "subtype2" "subtype2" "subtype2" "subtype2"
[145] "subtype2" "subtype1" "subtype2" "subtype2" "subtype1" "subtype1"
[151] "subtype1" "subtype3" "subtype1" "subtype3" "subtype1" "subtype3"
[157] "subtype2" "subtype2" "subtype1" "subtype3" "subtype3" "subtype2"
[163] "subtype1"
  [1] "subtype2" "subtype1" "subtype3" "subtype3" "subtype3" "subtype3"
  [7] "subtype2" "subtype2" "subtype2" "subtype3" "subtype3" "subtype3"
 [13] "subtype2" "subtype3" "subtype2" "subtype3" "subtype1" "subtype2"
 [19] "subtype2" "subtype2" "subtype2" "subtype3" "subtype2" "subtype2"
 [25] "subtype3" "subtype2" "subtype2" "subtype2" "subtype1" "subtype2"
 [31] "subtype1" "subtype1" "subtype1" "subtype2" "subtype3" "subtype3"
 [37] "subtype3" "subtype2" "subtype3" "subtype2" "subtype2" "subtype3"
 [43] "subtype3" "subtype2" "subtype1" "subtype3" "subtype2" "subtype1"
 [49] "subtype3" "subtype2" "subtype1" "subtype2" "subtype1" "subtype1"
 [55] "subtype2" "subtype3" "subtype2" "subtype1" "subtype2" "subtype1"
 [61] "subtype3" "subtype3" "subtype2" "subtype1" "subtype2" "subtype3"
 [67] "subtype3" "subtype3" "subtype2" "subtype2" "subtype1" "subtype3"
 [73] "subtype1" "subtype3" "subtype3" "subtype2" "subtype2" "subtype2"
 [79] "subtype1" "subtype1" "subtype3" "subtype2" "subtype3" "subtype2"
 [85] "subtype3" "subtype3" "subtype2" "subtype3" "subtype2" "subtype3"
 [91] "subtype3" "subtype1" "subtype2" "subtype2" "subtype2" "subtype2"
 [97] "subtype2" "subtype3" "subtype3" "subtype2" "subtype1" "subtype3"
[103] "subtype2" "subtype1" "subtype3" "subtype3" "subtype3" "subtype1"
[109] "subtype3" "subtype2" "subtype2" "subtype3" "subtype1" "subtype3"
[115] "subtype1" "subtype3" "subtype3" "subtype2" "subtype3" "subtype3"
[121] "subtype2" "subtype2" "subtype2" "subtype2" "subtype2" "subtype2"
[127] "subtype3" "subtype2" "subtype2" "subtype2" "subtype2" "subtype3"
[133] "subtype1" "subtype3" "subtype1" "subtype2" "subtype3" "subtype3"
[139] "subtype2" "subtype2" "subtype2" "subtype2" "subtype2" "subtype2"
[145] "subtype2" "subtype1" "subtype2" "subtype2" "subtype1" "subtype1"
[151] "subtype1" "subtype3" "subtype1" "subtype3" "subtype1" "subtype3"
[157] "subtype2" "subtype2" "subtype1" "subtype3" "subtype3" "subtype2"
[163] "subtype1"
  [1] "subtype2" "subtype1" "subtype3" "subtype3" "subtype3" "subtype3"
  [7] "subtype2" "subtype2" "subtype2" "subtype3" "subtype3" "subtype3"
 [13] "subtype2" "subtype3" "subtype2" "subtype3" "subtype1" "subtype2"
 [19] "subtype2" "subtype2" "subtype2" "subtype3" "subtype2" "subtype2"
 [25] "subtype3" "subtype2" "subtype2" "subtype2" "subtype1" "subtype2"
 [31] "subtype1" "subtype1" "subtype1" "subtype2" "subtype3" "subtype3"
 [37] "subtype3" "subtype2" "subtype3" "subtype2" "subtype2" "subtype3"
 [43] "subtype3" "subtype2" "subtype1" "subtype3" "subtype2" "subtype1"
 [49] "subtype3" "subtype2" "subtype1" "subtype2" "subtype1" "subtype1"
 [55] "subtype2" "subtype3" "subtype2" "subtype1" "subtype2" "subtype1"
 [61] "subtype3" "subtype3" "subtype2" "subtype1" "subtype2" "subtype3"
 [67] "subtype3" "subtype3" "subtype2" "subtype2" "subtype1" "subtype3"
 [73] "subtype1" "subtype3" "subtype3" "subtype2" "subtype2" "subtype2"
 [79] "subtype1" "subtype1" "subtype3" "subtype2" "subtype3" "subtype2"
 [85] "subtype3" "subtype3" "subtype2" "subtype3" "subtype2" "subtype3"
 [91] "subtype3" "subtype1" "subtype2" "subtype2" "subtype2" "subtype2"
 [97] "subtype2" "subtype3" "subtype3" "subtype2" "subtype1" "subtype3"
[103] "subtype2" "subtype1" "subtype3" "subtype3" "subtype3" "subtype1"
[109] "subtype3" "subtype2" "subtype2" "subtype3" "subtype1" "subtype3"
[115] "subtype1" "subtype3" "subtype3" "subtype2" "subtype3" "subtype3"
[121] "subtype2" "subtype2" "subtype2" "subtype2" "subtype2" "subtype2"
[127] "subtype3" "subtype2" "subtype2" "subtype2" "subtype2" "subtype3"
[133] "subtype1" "subtype3" "subtype1" "subtype2" "subtype3" "subtype3"
[139] "subtype2" "subtype2" "subtype2" "subtype2" "subtype2" "subtype2"
[145] "subtype2" "subtype1" "subtype2" "subtype2" "subtype1" "subtype1"
[151] "subtype1" "subtype3" "subtype1" "subtype3" "subtype1" "subtype3"
[157] "subtype2" "subtype2" "subtype1" "subtype3" "subtype3" "subtype2"
[163] "subtype1"
D5V2, continuous
D5V3, binary
[1] "tbl2"
          cls
clus       [,1] [,2]
  subtype1   22   16
  subtype2   42   40
  subtype3   37   30
        clus
vv       subtype1 subtype2 subtype3
  FEMALE       16       40       30
  MALE         22       42       37
           V1.D              V2              V3 
"Time to Death"           "AGE"        "GENDER" 
> q(save="no")
