index	chromosome	region_start	region_end	peak_start	peak_end	enlarged_peak_start	enlarged_peak_end	n_genes_in_region	genes_in_region	n_genes_in_peak	genes_in_peak	n_genes_on_chip	genes_on_chip	top 3
1	1	149879545	165958020	150466925	150483516	120527361	155591374	286	hsa-mir-555,hsa-mir-92b,hsa-mir-4258,hsa-mir-190b,hsa-mir-554,hsa-mir-4257,hsa-mir-3118-3,hsa-mir-3118-2,hsa-mir-3118-1,ADAR,ARNT,BCL9,CHRNB2,CKS1B,CLK2,CTSK,CTSS,ECM1,EFNA1,EFNA3,EFNA4,ENSA,FCGR1A,FCGR1B,FDPS,FLG,FMO5,GBA,GBAP1,GJA5,GJA8,IL6R,ILF2,IVL,KCNN3,LOR,MCL1,SMCP,MTX1,MUC1,NOTCH2,NPR1,PDZK1,PI4KB,PKLR,PRKAB2,PSMB4,PSMD4,RAB13,RFX5,RORC,RPS27,S100A1,S100A2,S100A3,S100A4,S100A5,S100A6,S100A7,S100A8,S100A9,S100A10,S100A11,S100A12,S100A13,SHC1,SPRR1A,SPRR1B,SPRR2A,SPRR2B,SPRR2C,SPRR2D,SPRR2E,SPRR2F,SPRR2G,SPRR3,VPS72,THBS3,TCHH,TPM3,TUFT1,HIST2H2AA3,HIST2H2AC,HIST2H2BE,HIST2H4A,PIP5K1A,ANXA9,ITGA10,ADAM15,PEX11B,SELENBP1,PRPF3,SEC22B,CHD1L,PDE4DIP,SETDB1,UBAP2L,SV2A,DENND4B,RBM8A,SCAMP3,SF3B4,PIAS3,HAX1,SEMA6C,POLR3C,TXNIP,PMVK,FAM189B,JTB,MTMR11,MLLT11,SLC27A3,TDRKH,CD160,CELF3,VPS45,POGZ,RPRD2,SNAPIN,RUSC1,CA14,NBPF14,C1orf43,CHTOP,LCE2B,SLC39A1,RNF115,TMOD4,CERS2,CRNN,BOLA1,ZBTB7B,APH1A,PLEKHO1,ACP6,GPR89B,OAZ3,DPM3,MRPS21,ADAMTSL4,CRCT1,C1orf56,MSTO1,GOLPH3L,UBE2Q1,FAM63A,ASH1L,LENEP,SLC50A1,CDC42SE1,OTUD7B,PGLYRP4,ATP8B2,FAM91A2,PBXIP1,S100A14,GATAD2B,CGN,ZNF687,HCN3,PRUNE,MRPL9,INTS3,SCNM1,TNFAIP8L2,C1orf54,TRIM46,TARS2,FLAD1,SNX27,ANP32E,HORMAD1,POLR3GL,LCE3D,AQP10,PYGO2,NUP210L,PGLYRP3,GNRHR2,THEM4,GABPB2,TCHHL1,RPTN,TDRD10,SHE,HIST2H3C,DCST2,LIX1L,S100A16,CREB3L4,C1orf51,HFE2,ANKRD35,LELP1,DCST1,BNIPL,SPRR4,PPIAL4A,PDIA3P,LCE4A,NBPF11,NUDT17,KRTCAP2,CRTC2,LCE5A,RIIAD1,THEM5,NBPF15,ANKRD34A,RUSC1-AS1,HIST2H2AB,HIST2H3A,HIST2H2BC,HIST2H2BA,S100A7A,LINGO4,LCE1A,LCE1B,LCE1C,LCE1D,LCE1E,LCE1F,LCE2A,LCE2C,LCE2D,LCE3A,LCE3B,LCE3C,LCE3E,LOC375010,NOTCH2NL,FLJ39739,LOC388692,LYSMD1,HRNR,FLG2,C1orf189,NBPF9,HIST2H2BF,KPRP,LCE6A,HIST2H4B,PRR9,PPIAL4G,PPIAL4D,LOC645166,LOC645676,POU5F1P4,S100A7L2,EMBP1,SRGAP2P2,PPIAL4B,LOC653513,GPR89A,PPIAL4C,HIST2H3D,FAM72B,MIR554,MIR555,MIR92B,HIST2H2AA4,FAM72D,LOC728855,LOC728875,NBPF24,GPR89C,NBPF16,PDZK1P1,PPIAL4F,LOC728989,PPIAL4E,PFN1P2,MIR190B,C1orf68,LOC100130000,LOC100132111,NBPF10,FCGR1C,C2CD4D,LOC100286793,LOC100289211,MIR4257,MIR4258,LOC100505666,TNFAIP8L2-SCNM1,	3	ECM1,RPRD2,TARS2,	
2	1	39552877	43924802	39908222	39975142	39906659	39982457	2	MACF1,BMP8A,	2	MACF1,BMP8A,	
3	1	85980350	86006717	85980350	85998036	85979932	86006009	1	DDAH1,	1	DDAH1,	
4	3	168230474	174573516	169550759	169573196	168983985	170320674	16	MECOM,CLDN11,PRKCI,SKIL,TERC,SEC62,GPR160,MYNN,SLC7A14,LRRC31,PHC3,ARPM1,LRRC34,LRRIQ4,SAMD7,LOC100128164,	2	LRRC31,LRRIQ4,	
5	5	914233	10555362	1288661	1288694	1288615	1299329	1	TERT,	1	TERT,	
6	5	33628262	41203227	36017782	36141791	35209995	39679414	28	hsa-mir-580,C9,DAB2,FYB,GDNF,IL7R,LIFR,PRLR,SKP2,SLC1A3,OSMR,NUP155,NIPBL,WDR70,C5orf42,SPEF2,LMBRD2,EGFLAM,NADKD1,UGT3A1,CAPSL,UGT3A2,RANBP3L,RICTOR,LOC646719,MIR580,MIR3650,EGFLAM-AS4,	2	LMBRD2,UGT3A2,	
7	6	41296241	42695848	41895445	42039666	40697625	42691277	34	BYSL,CCND3,GUCA1A,GUCA1B,MDFI,NFYA,PGC,PRPH2,TFEB,NCR2,MED20,FRS3,APOBEC2,UBR2,USP49,PRICKLE4,TREM2,TREM1,MRPS10,TRERF1,TREML2,FOXP4,TAF8,TREML2P1,LOC221442,C6orf130,TSPO2,UNC5CL,TREML4,TREML1,TREML3,C6orf132,TOMM6,MIR4641,	3	BYSL,CCND3,TAF8,	
8	7	52830858	57205767	54850681	54908629	54551310	55753174	7	EGFR,SEC61G,LANCL2,VOPP1,VSTM2A,LOC285878,FKBP9L,	0	[SEC61G]	
9	7	115134142	117381806	116409977	116417876	116287034	116606049	5	CAPZA2,MET,ST7,ST7-AS1,ST7-OT4,	1	MET,	
10	8	115122695	145232496	129171082	129171496	129142973	129194850	2	hsa-mir-1208,MIR1208,	0	[MIR1208]	
11	8	35802743	47464065	37920976	37943546	37836900	37965256	2	EIF4EBP1,ASH2L,	1	EIF4EBP1,	
12	8	35802743	47464065	42419796	42429147	41481308	42836087	20	hsa-mir-486,ANK1,CHRNB3,IKBKB,PLAT,POLB,SLC20A2,VDAC3,KAT6A,CHRNA6,AP3M2,DKK4,THAP1,RNF170,HOOK3,C8orf40,AGPAT6,NKX6-3,MIR486,MIR4469,	0	[C8orf40]	
13	11	66938708	70619290	68749203	69187200	68745899	69530753	8	hsa-mir-3164,CCND1,FGF19,MYEOV,MRGPRD,MRGPRF,TPCN2,ORAOV1,	5	hsa-mir-3164,MYEOV,MRGPRD,MRGPRF,TPCN2,	
14	11	102378560	102569590	102540295	102543258	100145024	104229919	28	BIRC2,BIRC3,MMP1,MMP3,MMP7,MMP8,MMP10,MMP12,MMP13,PGR,TRPC6,MMP20,YAP1,CNTN5,KIAA1377,MMP27,DYNC2H1,PDGFD,TMEM133,DCUN1D5,C11orf70,TMEM123,ARHGAP42,ANGPTL5,DDI1,LOC100288077,MIR3920,MIR4693,	0	[MMP27]	
15	12	62871827	72557979	69213655	69237735	69212831	69484229	2	CPM,MDM2,	1	MDM2,	
16	12	23554887	28110349	26175533	26262426	24885717	27281181	19	hsa-mir-4302,BCAT1,ITPR2,KRAS,LRMP,SSPN,MED21,RASSF8,FGFR1OP2,TM7SF3,CASC1,ASUN,BHLHE41,LYRM5,IFLTD1,C12orf77,C12orf71,MIR4302,LOC100506451,	1	RASSF8,	
17	14	26117421	47456098	36946972	36962989	36851906	37038360	2	NKX2-1,SFTA3,	1	SFTA3,	
18	17	37370695	38082831	37881273	37882955	35802898	39526560	118	CACNB1,CDC6,CCR7,CSF3,ERBB2,GRB7,IGFBP4,KRT10,KRT12,KRT33A,KRT33B,LASP1,MLLT6,NEUROD2,PNMT,MED1,PSMB3,PSMD3,RARA,RPL19,SMARCE1,TADA2A,HNF1B,THRA,TOP2A,PCGF2,PIP4K2B,TCAP,RPL23,NR1D1,MED24,STARD3,DDX52,DUSP14,SYNRG,CASC3,IKZF3,KRT23,SOCS7,RAPGEFL1,CDK12,KRT20,CWC25,GSDMB,PLXDC1,ARHGAP23,SRCIN1,KRTAP1-3,KRTAP1-1,KRTAP9-9,KRTAP4-6,KRTAP2-1,KRTAP4-12,KRTAP1-5,KRTAP3-1,KRTAP3-2,KRTAP9-2,KRTAP9-3,KRTAP9-8,KRTAP17-1,PPP1R1B,TBC1D3F,MIEN1,MRPL45,KRTAP4-4,TNS4,FBXL20,KRTAP9-4,KRTAP4-1,KRTAP4-5,KRTAP4-3,KRTAP4-2,KRTAP3-3,KRTAP2-4,PGAP3,ORMDL3,ZPBP2,GJD3,KRT222,KRT40,WIPF2,KRT25,TMEM99,KRT28,KRT24,LOC284100,CISD3,GSDMA,MSL1,KRT27,FLJ43826,STAC2,KRT26,C17orf98,ARL5C,KRT39,LOC440434,GPR179,FBXO47,SNORA21,KRTAP4-11,KRTAP4-8,KRTAP2-2,KRTAP9-1,TBC1D3,LOC730755,SNORD124,LOC100131347,KRTAP4-9,KRTAP4-7,C17orf96,LOC100505576,LRRC3C,KRTAP16-1,MIR4728,MIR4726,MIR4734,MIR4727,	2	ERBB2,MIR4728,	
19	17	75827371	76091180	76065696	76087020	75735417	76267005	11	BIRC5,TK1,SYNGR2,TMC6,TNRC6C,AFMID,TMC8,TMEM235,FLJ45079,LOC100131096,C17orf99,	1	TNRC6C,	
20	18	22350697	22614587	22368611	22468120	22365430	22515076	0	[LOC729950]	0	[LOC729950]	
21	19	29570479	32707538	30307098	30403440	24052992	40216781	212	ACTN4,APLP1,ATP4A,CAPNS1,CCNE1,CD22,CEBPA,CEBPG,TBCB,COX6B1,COX7A1,ECH1,ETV2,GPI,FFAR1,FFAR3,FFAR2,HNRNPL,HPN,LGALS4,LGALS7,LRP3,MAG,NFKBIB,NPHS1,PEPD,FXYD1,FXYD3,POLR2I,PSMD8,MRPS12,RPS16,RYR1,SCN1B,SUPT5H,TYROBP,UQCRFS1,USF2,ZFP36,ZNF146,DPF1,URI1,PDCD5,KCNK6,ZNF254,GMFG,KIAA0355,ZNF536,MLL4,UBA2,PAK4,TMEM147,SPINT2,DLL3,POP4,HCST,UPK1A,SLC7A9,MAP4K1,ZFP30,ZNF507,SIRT2,SIPA1L3,HAUS5,ZNF345,CLIP3,LSM14A,GAPDHS,ZBTB32,EIF3K,LGALS13,ZNF571,LSR,FXYD7,FXYD5,PAF1,SARS2,GPATCH1,SAMD4B,MED29,PSENEN,ZNF302,LIN37,SLC7A10,LGALS14,TSHZ3,LRFN1,GRAMD1A,ZFP14,ZNF529,HAMP,CATSPERG,PRODH2,C19orf33,CHST8,PLEKHG2,KCTD15,PLEKHF1,RBM42,LRFN3,IGFLR1,LOC80054,C19orf12,WDR87,KIRREL2,ANKRD27,PDCD2L,ZNF527,ZNF607,NFKBID,CEP89,ZNF382,ZNF566,ALKBH6,RHPN2,ZNF30,YIF1B,C19orf40,TDRD12,ZNF461,ZNF585B,TIMM50,DMKN,DKFZp566F0947,PPP1R14A,FBXO17,ARHGAP33,RASGRP4,ZNF573,WDR88,EID2B,WTIP,ZNF792,HSPB6,RINL,FBXO27,ZNF420,ZNF565,FAM98C,CAPN12,DPY19L3,LGALS16,ZNF599,FAM187B,C19orf55,LOC148145,LOC148189,ZNF569,ZNF570,ZNF567,ZNF383,ZNF781,EID2,LGI4,C19orf46,ZNF540,ZNF585A,GGN,THAP8,U2AF1L4,IL28A,IL28B,IL29,LOC284395,SCGB2B2,WDR62,ZFP82,LOC284408,LOC284412,HKR1,ZNF181,ZNF260,VSTM2B,ZNF850,NCCRP1,SYCN,SELV,SBSN,ZNF829,ZNF568,RGS9BP,KRTDAP,ZNF790,NUDT19,ZNF793,PAPL,SPRED3,LOC400684,LOC400685,LGALS17A,LOC643669,SCGB1B2P,SDHAF1,LOC644189,LOC644554,LGALS7B,LOC728752,ZNF726,LOC100101266,LOC100128675,LOC100128682,LOC100129935,SCGB2B3P,LOC100134317,LOC100505835,LOC100506469,LOC100506930,LOC100507433,THEG5,MIR4530,LOC100631378,LOC100652909,	1	CCNE1,	
22	19	45156590	45400418	45243799	45296806	45027965	45614840	24	APOC1,APOC1P1,APOC2,APOC4,APOE,BCL3,CLPTM1,BCAM,PVR,PVRL2,RELB,TOMM40,CLASRP,CBLC,CEACAM19,GEMIN7,CEACAM20,IGSF23,ZNF296,PPP1R37,CEACAM22P,CEACAM16,APOC4-APOC2,MIR4531,	2	BCL3,CBLC,	
23	20	59623914	62219837	62170618	62219837	62091058	62219837	43	hsa-mir-647,EEF1A2,NPBWR2,KCNQ2,MYT1,OPRL1,PTK6,SRMS,TCEA2,TPD52L2,TNFRSF6B,ARFRP1,RGS19,PRPF6,GMEB2,STMN3,RTEL1,SOX18,LIME1,UCKL1,PCMTD2,SLC2A4RG,ZNF512B,C20orf195,PPDPF,DNAJC5,ZGPAT,PRIC285,ZBTB46,SAMD10,ABHD16B,LINC00266-1,C20orf201,LINC00176,MIR647,UCKL1-AS1,MIR941-1,MIR941-4,MIR941-2,MIR941-3,MIR1914,LOC100505815,RTEL1-TNFRSF6B,	40	hsa-mir-647,NPBWR2,MYT1,OPRL1,PTK6,SRMS,TCEA2,TPD52L2,TNFRSF6B,ARFRP1,RGS19,PRPF6,GMEB2,STMN3,RTEL1,SOX18,LIME1,UCKL1,PCMTD2,SLC2A4RG,ZNF512B,C20orf195,DNAJC5,ZGPAT,PRIC285,ZBTB46,SAMD10,ABHD16B,LINC00266-1,C20orf201,LINC00176,MIR647,UCKL1-AS1,MIR941-1,MIR941-4,MIR941-2,MIR941-3,MIR1914,LOC100505815,RTEL1-TNFRSF6B,	
24	20	51425973	53857179	52189951	52239052	52038665	53196086	8	CYP24A1,PFDN4,ZNF217,BCAS1,DOK5,TSHZ2,SUMO1P1,MIR4756,	1	ZNF217,	
