# Created: Wed Aug 01 18:28:05 EDT 2012 by cgaadm_deadline
# Job: 140999    server:  http://tcga-gdac-genepattern.broadinstitute.org:8090/gp/
# Module: ParadigmPreprocessExpression urn:lsid:broadinstitute.org:cancer.genome.analysis:00420:9
# Parameters: 
#    broadFile = file:/xchip/cga/gdac-prod/tcga-gdac/jobResults/GDAC_MergeDataFilesPipeline/OV/1551599/2.GDAC_MergeDataFiles.Finished/OV.transcriptome__ht_hg_u133a__broad_mit_edu__Level_3__gene_rma__data.data.txt
#    exonFile = file:/xchip/cga/gdac-prod/tcga-gdac/jobResults/GDAC_MergeDataFilesPipeline/OV/1551648/2.GDAC_MergeDataFiles.Finished/OV.exon__huex_1_0_st_v2__lbl_gov__Level_3__quantile_normalization_gene__data.data.txt
#    uncFile = file:/xchip/cga/gdac-prod/tcga-gdac/jobResults/GDAC_MergeDataFilesPipeline/OV/1551596/2.GDAC_MergeDataFiles.Finished/OV.transcriptome__agilentg4502a_07_3__unc_edu__Level_3__unc_lowess_normalization_gene_level__data.data.txt
#    broadNormalsFile = 
#    exonNormalsFile = 
#    uncNormalsFile = 
