
R version 2.10.1 (2009-12-14)
Copyright (C) 2009 The R Foundation for Statistical Computing
ISBN 3-900051-07-0

R is free software and comes with ABSOLUTELY NO WARRANTY.
You are welcome to redistribute it under certain conditions.
Type 'license()' or 'licence()' for distribution details.

R is a collaborative project with many contributors.
Type 'contributors()' for more information and
'citation()' on how to cite R or R packages in publications.

Type 'demo()' for some demos, 'help()' for on-line help, or
'help.start()' for an HTML browser interface to help.
Type 'q()' to quit R.

> source("/xchip/tcga/gdac_prod/applications/tcga-gdac-genepattern/gp-3.2.4-9272/Tomcat/../../taskLib/GDAC_TopgenesforCluster.29.3614/Topgenes_v1.R")
> result <- main("-s/xchip/tcga/gdac_prod/applications/tcga-gdac-genepattern/gp-3.2.4-9272/Tomcat/../../taskLib/GDAC_TopgenesforCluster.29.3614/", "-m/xchip/cga/gdac-prod/tcga-gdac/jobResults/GDAC_MethylationPreprocess/THCA/1590692/0.GDAC_MethylationPreprocess.Finished/THCA.meth.filtered.txt", "-u5906", "-ooutputprefix")
Cluster size 5906 broken into 1256 4650 
Done cluster 1256 
Cluster size 4650 broken into 1532 3118 
Cluster size 1532 broken into 607 925 
Done cluster 607 
Done cluster 925 
Done cluster 1532 
Cluster size 3118 broken into 1657 1461 
Cluster size 1657 broken into 1054 603 
Done cluster 1054 
Done cluster 603 
Done cluster 1657 
Done cluster 1461 
Done cluster 3118 
Done cluster 4650 
> q(save="no")
