
R version 2.10.1 (2009-12-14)
Copyright (C) 2009 The R Foundation for Statistical Computing
ISBN 3-900051-07-0

R is free software and comes with ABSOLUTELY NO WARRANTY.
You are welcome to redistribute it under certain conditions.
Type 'license()' or 'licence()' for distribution details.

R is a collaborative project with many contributors.
Type 'contributors()' for more information and
'citation()' on how to cite R or R packages in publications.

Type 'demo()' for some demos, 'help()' for on-line help, or
'help.start()' for an HTML browser interface to help.
Type 'q()' to quit R.

> source("/xchip/tcga/gdac_prod/applications/tcga-gdac-genepattern/gp-3.2.4-9272/Tomcat/../../taskLib/Correlate_Clinical_Clusters_onlysig.32.3479/Clusters2ClinicalAnalysis_nozzle_onlysig.R")
> result <- main("/xchip/tcga/gdac_prod/applications/tcga-gdac-genepattern/gp-3.2.4-9272/Tomcat/../../taskLib/Correlate_Clinical_Clusters_onlysig.32.3479/", "-nF=/xchip/tcga/Tools/Nozzle/v1.current", "-iD=/xchip/cga/gdac-prod/tcga-gdac/jobResults/GDAC_MergedClusteringPipeline/UCEC/1593879/1.GDAC_mergedClustering.Finished/UCEC.mergedcluster.txt", "-iC=/xchip/cga/gdac-prod/tcga-gdac/jobResults/GDAC_clinicalDataPickerPipeline/UCEC/1552432/1.GDAC_clinicalDataPicker.Finished/UCEC.clin.merged.picked.txt", "-fF=ALL", "-fC=3", "-fH=5", "-fW=9", "-fP=OUT", "-cP=0.05", "-cQ=1", "-MF=ALL", "-oT=", "-nV=Nozzle.R1", "-OP=AGGREGRATED_CLUSTER", "-iT=", "-iX=")
[1] "nver"          "-nV=Nozzle.R1"
[1] "nfn"                                 "/xchip/tcga/Tools/Nozzle/v1.current"
[1] "Nozzle.R1"
[1] "successfully load Nozzle.R1"
[1] "ofn"  "-oT="
[1] "opt"                     "-OP=AGGREGRATED_CLUSTER"
[1] "tl"   "-iT="
[1] "dx"   "-iX="
[1] "opt"                 "AGGREGRATED_CLUSTER"
[1] "dx" ""  

nPatients in clinical file=451, in cluster file=451, common to both=430
[1]   7 430
[1] "MRNA_CNMF"
[1] 3
 1  2  3  4 
13 19 14  8 
 1  2  3  4 
13 19 14  8 
[1] "MRNA_CHIERARCHICAL"
[1] 3
 1  2  3 
20 15 19 
 1  2  3 
20 15 19 
[1] "METHLYATION_CNMF"
[1] 3
  1   2   3 
115  76 122 
  1   2   3 
115  76 122 
[1] "MRNASEQ_CNMF"
[1] 3
 1  2  3 
96 83 87 
 1  2  3 
96 83 87 
[1] "MRNASEQ_CHIERARCHICAL"
[1] 3
 1  2  3 
96 82 88 
 1  2  3 
96 82 88 
[1] "MIRSEQ_CNMF"
[1] 3
  1   2   3 
141 125 100 
  1   2   3 
141 125 100 
[1] "MIRSEQ_CHIERARCHICAL"
[1] 3
  1   2   3 
112 177  77 
  1   2   3 
112 177  77 
[1] "data2feature, selection=ALL"
 [1] "YEARSTOBIRTH"                          
 [2] "DAYSTODEATH"                           
 [3] "DAYSTOLASTFOLLOWUP"                    
 [4] "VITALSTATUS"                           
 [5] "DCCUPLOADDATE"                         
 [6] "PRIMARYSITEOFDESEASE"                  
 [7] "GENDER"                                
 [8] "DATEOFINITIALPATHOLOGICDIAGNOSIS"      
 [9] "DAYSTOLASTKNOWNALIVE"                  
[10] "HISTOLOGICALTYPE"                      
[11] "TUMORGRADE"                            
[12] "RADIATIONS.RADIATION.REGIMENINDICATION"
[13] "NEOADJUVANTTHERAPY"                    
[14] "BATCHNUMBER"                           

Input Data has 14 rows and 430 columns.

[1] "Batch" "14"   
[1] "Last Follow UP"
TCGA-A5-A0G1 TCGA-A5-A0G2 TCGA-A5-A0G3 TCGA-A5-A0G5 TCGA-A5-A0G9 TCGA-A5-A0GA 
          NA         4053         1079          790         2165           NA 
TCGA-A5-A0GB TCGA-A5-A0GD TCGA-A5-A0GE TCGA-A5-A0GG TCGA-A5-A0GH TCGA-A5-A0GI 
         275           97         2717         2516         1671         1750 
TCGA-A5-A0GJ TCGA-A5-A0GM TCGA-A5-A0GN TCGA-A5-A0GP TCGA-A5-A0GQ TCGA-A5-A0GR 
        1447         1448         1477         1087         1167          780 
TCGA-A5-A0GU TCGA-A5-A0GV TCGA-A5-A0GW TCGA-A5-A0GX TCGA-A5-A0R6 TCGA-A5-A0R7 
         495          485          385          924          369           40 
TCGA-A5-A0R8 TCGA-A5-A0R9 TCGA-A5-A0RA TCGA-A5-A0VO TCGA-A5-A0VP TCGA-A5-A0VQ 
         125          294          555          128          927          177 
TCGA-A5-A1OF TCGA-A5-A1OG TCGA-A5-A1OJ TCGA-A5-A1OK TCGA-A5-A2K2 TCGA-A5-A2K3 
         241          348          292          243         2768         1409 
TCGA-A5-A2K4 TCGA-A5-A2K5 TCGA-A5-A2K7 TCGA-AJ-A23M TCGA-AJ-A23O TCGA-AJ-A2QK 
          NA          161          156           31           60           12 
TCGA-AJ-A2QL TCGA-AJ-A2QM TCGA-AJ-A2QN TCGA-AJ-A2QO TCGA-AJ-A3BD TCGA-AJ-A3BF 
          49           31           61           91           15           34 
TCGA-AJ-A3BG TCGA-AJ-A3BH TCGA-AJ-A3BI TCGA-AJ-A3BK TCGA-AJ-A3EJ TCGA-AJ-A3EK 
          31           NA           61           51           NA           64 
TCGA-AJ-A3EL TCGA-AJ-A3EM TCGA-AJ-A3IA TCGA-AP-A051 TCGA-AP-A052 TCGA-AP-A053 
          65           50           28         2545           NA          181 
TCGA-AP-A054 TCGA-AP-A056 TCGA-AP-A059 TCGA-AP-A05A TCGA-AP-A05D TCGA-AP-A05H 
          NA         2026          250         1198         1364          831 
TCGA-AP-A05J TCGA-AP-A05N TCGA-AP-A05O TCGA-AP-A05P TCGA-AP-A0L8 TCGA-AP-A0L9 
         639          239          371          260           NA         3443 
TCGA-AP-A0LD TCGA-AP-A0LE TCGA-AP-A0LF TCGA-AP-A0LG TCGA-AP-A0LH TCGA-AP-A0LI 
        2906         2986          103         1921           NA         2602 
TCGA-AP-A0LJ TCGA-AP-A0LL TCGA-AP-A0LM TCGA-AP-A0LN TCGA-AP-A0LO TCGA-AP-A0LP 
         965         2141          825         1992           NA         1875 
TCGA-AP-A0LQ TCGA-AP-A0LS TCGA-AP-A0LT TCGA-AP-A0LV TCGA-AP-A1DH TCGA-AP-A1DK 
        1906         1668         1185          385         1816         1650 
TCGA-AP-A1DM TCGA-AP-A1DO TCGA-AP-A1DP TCGA-AP-A1DQ TCGA-AP-A1DR TCGA-AP-A1DV 
        1329          952           NA         1184         1131          204 
TCGA-AP-A1E0 TCGA-AP-A1E1 TCGA-AP-A1E3 TCGA-AP-A1E4 TCGA-AW-A1PO TCGA-AX-A05S 
         691          317          523          267           17           NA 
TCGA-AX-A05T TCGA-AX-A05U TCGA-AX-A05W TCGA-AX-A05Y TCGA-AX-A05Z TCGA-AX-A060 
         603          902         2078         2191         1413         1075 
TCGA-AX-A062 TCGA-AX-A063 TCGA-AX-A064 TCGA-AX-A06B TCGA-AX-A06D TCGA-AX-A06F 
        1398         2024         1064         1639           NA         1554 
TCGA-AX-A06H TCGA-AX-A06J TCGA-AX-A06L TCGA-AX-A0IS TCGA-AX-A0IU TCGA-AX-A0IW 
         833          913         1479         1065          868         1148 
TCGA-AX-A0IZ TCGA-AX-A0J0 TCGA-AX-A0J1 TCGA-AX-A1C4 TCGA-AX-A1C5 TCGA-AX-A1C7 
        1333         1219         2004          404          584          515 
TCGA-AX-A1C8 TCGA-AX-A1C9 TCGA-AX-A1CA TCGA-AX-A1CC TCGA-AX-A1CE TCGA-AX-A1CF 
         412          464          617          378          610         2337 
TCGA-AX-A1CI TCGA-AX-A1CJ TCGA-AX-A1CK TCGA-AX-A1CN TCGA-AX-A1CP TCGA-AX-A1CR 
        2207         1645         2052          764         1107          337 
TCGA-AX-A2H2 TCGA-AX-A2H4 TCGA-AX-A2H5 TCGA-AX-A2H7 TCGA-AX-A2H8 TCGA-AX-A2HA 
          NA           NA         2167         1020         1861         2090 
TCGA-AX-A2HC TCGA-AX-A2HD TCGA-AX-A2HF TCGA-AX-A2HG TCGA-AX-A2HH TCGA-AX-A2HJ 
        1016         1232          489          660          539          831 
TCGA-AX-A2HK TCGA-AX-A2IN TCGA-AX-A2IO TCGA-AX-A3G3 TCGA-AX-A3G4 TCGA-AX-A3G6 
          NA           NA         1176            1            4           NA 
TCGA-AX-A3G7 TCGA-AX-A3GI TCGA-B5-A0JN TCGA-B5-A0JR TCGA-B5-A0JS TCGA-B5-A0JT 
           7            4         2068         1465         1241         1312 
TCGA-B5-A0JU TCGA-B5-A0JV TCGA-B5-A0JX TCGA-B5-A0JY TCGA-B5-A0JZ TCGA-B5-A0K0 
        1483         1125         1360          821          689          679 
TCGA-B5-A0K1 TCGA-B5-A0K2 TCGA-B5-A0K3 TCGA-B5-A0K4 TCGA-B5-A0K6 TCGA-B5-A0K7 
         746          682          700          466          426          372 
TCGA-B5-A0K8 TCGA-B5-A0K9 TCGA-B5-A0KB TCGA-B5-A11E TCGA-B5-A11F TCGA-B5-A11G 
         542          166          124          265         5279         3076 
TCGA-B5-A11H TCGA-B5-A11I TCGA-B5-A11J TCGA-B5-A11L TCGA-B5-A11M TCGA-B5-A11N 
        2317         2038         1291         1396         1117         1147 
TCGA-B5-A11O TCGA-B5-A11P TCGA-B5-A11Q TCGA-B5-A11R TCGA-B5-A11S TCGA-B5-A11U 
        1034         1120          702          837          650          271 
TCGA-B5-A11V TCGA-B5-A11W TCGA-B5-A11X TCGA-B5-A11Y TCGA-B5-A11Z TCGA-B5-A121 
         231          339          337          315          291          259 
TCGA-B5-A1MR TCGA-B5-A1MU TCGA-B5-A1MV TCGA-B5-A1MW TCGA-B5-A1MX TCGA-B5-A1MY 
        5690           NA          380          220          174           NA 
TCGA-B5-A1MZ TCGA-B5-A1N2 TCGA-BG-A0LW TCGA-BG-A0LX TCGA-BG-A0M0 TCGA-BG-A0M2 
         465          389          194          252          237          316 
TCGA-BG-A0M3 TCGA-BG-A0M4 TCGA-BG-A0M6 TCGA-BG-A0M7 TCGA-BG-A0M8 TCGA-BG-A0M9 
         742          480          241          698          690          765 
TCGA-BG-A0MA TCGA-BG-A0MC TCGA-BG-A0MG TCGA-BG-A0MH TCGA-BG-A0MI TCGA-BG-A0MO 
          NA          827          896         1341           NA         1021 
TCGA-BG-A0MQ TCGA-BG-A0MS TCGA-BG-A0MT TCGA-BG-A0MU TCGA-BG-A0RY TCGA-BG-A0VT 
         761          553          240          231          128          224 
TCGA-BG-A0VV TCGA-BG-A0VW TCGA-BG-A0VX TCGA-BG-A0VZ TCGA-BG-A0W1 TCGA-BG-A0W2 
         260          131          490          868          907         1151 
TCGA-BG-A0YU TCGA-BG-A0YV TCGA-BG-A186 TCGA-BG-A187 TCGA-BG-A18A TCGA-BG-A18B 
         279          186          230          231          252          155 
TCGA-BG-A18C TCGA-BG-A220 TCGA-BG-A221 TCGA-BG-A222 TCGA-BG-A2AD TCGA-BG-A2AE 
         169          220           46           14           NA           16 
TCGA-BG-A2L7 TCGA-BK-A0C9 TCGA-BK-A0CA TCGA-BK-A0CB TCGA-BK-A0CC TCGA-BK-A139 
         177          289          371          188          211          239 
TCGA-BK-A13C TCGA-BK-A26L TCGA-BS-A0T9 TCGA-BS-A0TA TCGA-BS-A0TC TCGA-BS-A0TD 
         202          233           NA          714         2260         2002 
TCGA-BS-A0TE TCGA-BS-A0TG TCGA-BS-A0TI TCGA-BS-A0TJ TCGA-BS-A0U5 TCGA-BS-A0U7 
          NA         2034         1443         1514         2204           NA 
TCGA-BS-A0U8 TCGA-BS-A0U9 TCGA-BS-A0UA TCGA-BS-A0UF TCGA-BS-A0UJ TCGA-BS-A0UL 
        2606         1749         2540         1843           27           36 
TCGA-BS-A0UM TCGA-BS-A0UT TCGA-BS-A0UV TCGA-BS-A0V4 TCGA-BS-A0V6 TCGA-BS-A0V7 
        2191          595          149           31         1650         1429 
TCGA-BS-A0V8 TCGA-BS-A0VI TCGA-BS-A0WQ TCGA-D1-A0ZN TCGA-D1-A0ZO TCGA-D1-A0ZP 
        1507         1661         1207          512           69          690 
TCGA-D1-A0ZQ TCGA-D1-A0ZR TCGA-D1-A0ZS TCGA-D1-A0ZU TCGA-D1-A0ZV TCGA-D1-A0ZZ 
           8           17          147          578          350          377 
TCGA-D1-A101 TCGA-D1-A102 TCGA-D1-A103 TCGA-D1-A15V TCGA-D1-A15W TCGA-D1-A15X 
          53           43          480         1012          915          909 
TCGA-D1-A15Z TCGA-D1-A160 TCGA-D1-A161 TCGA-D1-A162 TCGA-D1-A163 TCGA-D1-A165 
          NA          112          892          976          938           20 
TCGA-D1-A167 TCGA-D1-A168 TCGA-D1-A169 TCGA-D1-A16B TCGA-D1-A16D TCGA-D1-A16E 
         478          913          905          744          908          909 
TCGA-D1-A16F TCGA-D1-A16G TCGA-D1-A16I TCGA-D1-A16J TCGA-D1-A16N TCGA-D1-A16O 
          80           NA           NA          742          640          864 
TCGA-D1-A16Q TCGA-D1-A16R TCGA-D1-A16S TCGA-D1-A16V TCGA-D1-A16X TCGA-D1-A16Y 
         221           21          238           43          111          532 
TCGA-D1-A174 TCGA-D1-A175 TCGA-D1-A176 TCGA-D1-A177 TCGA-D1-A179 TCGA-D1-A17A 
         324          202          506          347          206           19 
TCGA-D1-A17B TCGA-D1-A17C TCGA-D1-A17D TCGA-D1-A17F TCGA-D1-A17H TCGA-D1-A17K 
         212            1          160           39          454          429 
TCGA-D1-A17L TCGA-D1-A17M TCGA-D1-A17N TCGA-D1-A17Q TCGA-D1-A17R TCGA-D1-A17S 
         459          311           46           54           NA          326 
TCGA-D1-A17T TCGA-D1-A17U TCGA-D1-A1NS TCGA-D1-A1NU TCGA-D1-A1NW TCGA-D1-A1NX 
          70          396           43          311           22          399 
TCGA-D1-A1NY TCGA-D1-A1NZ TCGA-D1-A1O0 TCGA-D1-A1O5 TCGA-D1-A1O7 TCGA-D1-A1O8 
         396            8            2          377           32           NA 
TCGA-D1-A2G0 TCGA-D1-A2G5 TCGA-D1-A2G6 TCGA-D1-A2G7 TCGA-D1-A3DA TCGA-D1-A3DG 
         107         1260           NA         1365            8           NA 
TCGA-D1-A3DH TCGA-DI-A0WH TCGA-DI-A1BU TCGA-DI-A1BY TCGA-DI-A1C3 TCGA-DI-A1NN 
         125          405         1005         1114          739          943 
TCGA-DI-A1NO TCGA-DI-A2QT TCGA-DI-A2QU TCGA-DI-A2QY TCGA-E6-A1LX TCGA-E6-A1LZ 
          NA           NA           NA         2797          711         1289 
TCGA-E6-A1M0 TCGA-E6-A2P8 TCGA-E6-A2P9 TCGA-EC-A1NJ TCGA-EC-A1QX TCGA-EC-A24G 
         427           NA          202           NA           66           46 
TCGA-EO-A1Y5 TCGA-EO-A1Y7 TCGA-EO-A1Y8 TCGA-EO-A22R TCGA-EO-A22S TCGA-EO-A22T 
         332          243          328          972         1066         1004 
TCGA-EO-A22U TCGA-EO-A22X TCGA-EO-A22Y TCGA-EO-A2CG TCGA-EO-A2CH TCGA-EY-A1G7 
         825          929          701          672           NA           NA 
TCGA-EY-A1G8 TCGA-EY-A1GC TCGA-EY-A1GD TCGA-EY-A1GE TCGA-EY-A1GF TCGA-EY-A1GH 
          NA          138          248          552          532          527 
TCGA-EY-A1GI TCGA-EY-A1GJ TCGA-EY-A1GK TCGA-EY-A1GL TCGA-EY-A1GM TCGA-EY-A1GO 
         506          510          503          424          209          360 
TCGA-EY-A1GP TCGA-EY-A1GQ TCGA-EY-A1GR TCGA-EY-A1GS TCGA-EY-A1GT TCGA-EY-A1GU 
         348          340          344          284          300          259 
TCGA-EY-A1GV TCGA-EY-A1GW TCGA-EY-A1GX TCGA-EY-A1H0 TCGA-EY-A210 TCGA-EY-A212 
         257          260          166          339          165          109 
TCGA-EY-A214 TCGA-EY-A215 TCGA-EY-A2OM TCGA-EY-A2ON TCGA-EY-A2OO TCGA-EY-A2OP 
         252          391          235          171          774          503 
TCGA-EY-A2OQ TCGA-FI-A2CX TCGA-FI-A2CY TCGA-FI-A2D0 TCGA-FI-A2D2 TCGA-FI-A2D4 
         293         1217         1064         1034         1095           NA 
TCGA-FI-A2D5 TCGA-FI-A2D6 TCGA-FI-A2EU TCGA-FI-A2EW TCGA-FI-A2EX TCGA-FI-A2EY 
          NA          273         2557         1795          276           NA 
TCGA-FI-A2F4 TCGA-FI-A2F8 TCGA-FI-A2F9 TCGA-H5-A2HR 
         880          761          791           53 
Variable 1:'AGE':	nDistinctValues=59,	numeric=TRUE,	binary=FALSE,	exclude=FALSE.
Variable 2:'DAYSTODEATH':	nDistinctValues=39,	numeric=TRUE,	binary=FALSE,	exclude=TRUE.
Variable 3:'DAYSTOLASTFOLLOWUP':	nDistinctValues=332,	numeric=TRUE,	binary=FALSE,	exclude=TRUE.
Variable 4:'VITALSTATUS':	nDistinctValues=2,	numeric=TRUE,	binary=TRUE,	exclude=FALSE.
Variable 5:'DCCUPLOADDAY':	nDistinctValues=2,	numeric=FALSE,	binary=FALSE,	exclude=TRUE.
Variable 6:'PRIMARY.SITE.OF.DISEASE':	nDistinctValues=1,	numeric=FALSE,	binary=FALSE,	exclude=TRUE.
Variable 7:'GENDER':	nDistinctValues=1,	numeric=FALSE,	binary=FALSE,	exclude=TRUE.
Variable 8:'DAYOFINITIALPATHOLOGICDIAGNOSIS':	nDistinctValues=16,	numeric=TRUE,	binary=FALSE,	exclude=TRUE.
Variable 9:'DAYSTOLASTKNOWNALIVE':	nDistinctValues=17,	numeric=TRUE,	binary=FALSE,	exclude=TRUE.
Variable 10:'HISTOLOGICAL.TYPE':	nDistinctValues=7,	numeric=FALSE,	binary=FALSE,	exclude=FALSE.
Variable 11:'TUMOR.GRADE':	nDistinctValues=4,	numeric=FALSE,	binary=FALSE,	exclude=FALSE.
Variable 12:'RADIATIONS.RADIATION.REGIMENINDICATION':	nDistinctValues=2,	numeric=FALSE,	binary=FALSE,	exclude=FALSE.
Variable 13:'NEOADJUVANT.THERAPY':	nDistinctValues=2,	numeric=FALSE,	binary=FALSE,	exclude=FALSE.
Variable 14:'BATCH.NUMBER':	nDistinctValues=25,	numeric=FALSE,	binary=FALSE,	exclude=TRUE.
[1] "rownames(nsurv.mat)"
[1] "AGE"                                   
[2] "HISTOLOGICAL.TYPE"                     
[3] "TUMOR.GRADE"                           
[4] "RADIATIONS.RADIATION.REGIMENINDICATION"
[5] "NEOADJUVANT.THERAPY"                   
[1] "TUMOR.?STAGE"
[1] "TUMOR.?GRADE" "3"           
[1] "PATHOLOGY.T"
[1] "PATHOLOGY.N"
Output Data has 430 columns, 1 survival variables, and 4 non-survival variables.
AGE, nv=59, binary=FALSE, numeric=TRUE
HISTOLOGICAL.TYPE, nv=7, binary=FALSE, numeric=FALSE
RADIATIONS.RADIATION.REGIMENINDICATION, nv=2, binary=FALSE, numeric=FALSE
NEOADJUVANT.THERAPY, nv=2, binary=FALSE, numeric=FALSE

Clustering(1) Variable = MRNA_CNMF
D1V1, survival
 [1] "subtype1" "subtype2" "subtype2" "subtype1" "subtype1" "subtype3"
 [7] "subtype2" "subtype3" "subtype3" "subtype3" "subtype1" "subtype2"
[13] "subtype2" "subtype2" "subtype2" "subtype2" "subtype2" "subtype2"
[19] "subtype2" "subtype4" "subtype3" "subtype2" "subtype2" "subtype2"
[25] "subtype4" "subtype3" "subtype3" "subtype4" "subtype1" "subtype4"
[31] "subtype1" "subtype3" "subtype3" "subtype3" "subtype3" "subtype1"
[37] "subtype1" "subtype4" "subtype1" "subtype1" "subtype2" "subtype1"
[43] "subtype3" "subtype2" "subtype2" "subtype1" "subtype1" "subtype4"
[49] "subtype3" "subtype2" "subtype4" "subtype4" "subtype3" "subtype2"
 [1] "subtype1" "subtype2" "subtype2" "subtype1" "subtype1" "subtype3"
 [7] "subtype2" "subtype3" "subtype3" "subtype3" "subtype1" "subtype2"
[13] "subtype2" "subtype2" "subtype2" "subtype2" "subtype2" "subtype2"
[19] "subtype2" "subtype4" "subtype3" "subtype2" "subtype2" "subtype2"
[25] "subtype4" "subtype3" "subtype3" "subtype4" "subtype1" "subtype4"
[31] "subtype1" "subtype3" "subtype3" "subtype3" "subtype3" "subtype1"
[37] "subtype1" "subtype4" "subtype1" "subtype1" "subtype2" "subtype1"
[43] "subtype3" "subtype2" "subtype2" "subtype1" "subtype1" "subtype4"
[49] "subtype3" "subtype2" "subtype4" "subtype4" "subtype3" "subtype2"
 [1] "subtype1" "subtype2" "subtype2" "subtype1" "subtype1" "subtype3"
 [7] "subtype2" "subtype3" "subtype3" "subtype3" "subtype1" "subtype2"
[13] "subtype2" "subtype2" "subtype2" "subtype2" "subtype2" "subtype2"
[19] "subtype2" "subtype4" "subtype3" "subtype2" "subtype2" "subtype2"
[25] "subtype4" "subtype3" "subtype3" "subtype4" "subtype1" "subtype4"
[31] "subtype1" "subtype3" "subtype3" "subtype3" "subtype3" "subtype1"
[37] "subtype1" "subtype4" "subtype1" "subtype1" "subtype2" "subtype1"
[43] "subtype3" "subtype2" "subtype2" "subtype1" "subtype1" "subtype4"
[49] "subtype3" "subtype2" "subtype4" "subtype4" "subtype3" "subtype2"
D1V2, continuous
D1V3, multiclass
D1V4, binary
[1] "tbl2"
          cls
clus       [,1] [,2]
  subtype1    7    6
  subtype2   13    6
  subtype3    3   11
  subtype4    2    6
     clus
vv    subtype1 subtype2 subtype3 subtype4
  NO         7       13        3        2
  YES        6        6       11        6
D1V5, binary
[1] "tbl2"
          cls
clus       [,1] [,2]
  subtype1    7    6
  subtype2    9   10
  subtype3   12    2
  subtype4    8    0
     clus
vv    subtype1 subtype2 subtype3 subtype4
  NO         6       10        2        0
  YES        7        9       12        8

Clustering(2) Variable = MRNA_CHIERARCHICAL
D2V1, survival
 [1] "subtype2" "subtype3" "subtype2" "subtype2" "subtype2" "subtype1"
 [7] "subtype3" "subtype1" "subtype2" "subtype1" "subtype2" "subtype3"
[13] "subtype3" "subtype3" "subtype2" "subtype3" "subtype3" "subtype3"
[19] "subtype3" "subtype1" "subtype3" "subtype3" "subtype3" "subtype3"
[25] "subtype1" "subtype1" "subtype1" "subtype1" "subtype2" "subtype1"
[31] "subtype2" "subtype1" "subtype1" "subtype1" "subtype3" "subtype2"
[37] "subtype2" "subtype1" "subtype2" "subtype1" "subtype3" "subtype2"
[43] "subtype1" "subtype3" "subtype3" "subtype2" "subtype2" "subtype1"
[49] "subtype1" "subtype3" "subtype1" "subtype1" "subtype1" "subtype3"
 [1] "subtype2" "subtype3" "subtype2" "subtype2" "subtype2" "subtype1"
 [7] "subtype3" "subtype1" "subtype2" "subtype1" "subtype2" "subtype3"
[13] "subtype3" "subtype3" "subtype2" "subtype3" "subtype3" "subtype3"
[19] "subtype3" "subtype1" "subtype3" "subtype3" "subtype3" "subtype3"
[25] "subtype1" "subtype1" "subtype1" "subtype1" "subtype2" "subtype1"
[31] "subtype2" "subtype1" "subtype1" "subtype1" "subtype3" "subtype2"
[37] "subtype2" "subtype1" "subtype2" "subtype1" "subtype3" "subtype2"
[43] "subtype1" "subtype3" "subtype3" "subtype2" "subtype2" "subtype1"
[49] "subtype1" "subtype3" "subtype1" "subtype1" "subtype1" "subtype3"
 [1] "subtype2" "subtype3" "subtype2" "subtype2" "subtype2" "subtype1"
 [7] "subtype3" "subtype1" "subtype2" "subtype1" "subtype2" "subtype3"
[13] "subtype3" "subtype3" "subtype2" "subtype3" "subtype3" "subtype3"
[19] "subtype3" "subtype1" "subtype3" "subtype3" "subtype3" "subtype3"
[25] "subtype1" "subtype1" "subtype1" "subtype1" "subtype2" "subtype1"
[31] "subtype2" "subtype1" "subtype1" "subtype1" "subtype3" "subtype2"
[37] "subtype2" "subtype1" "subtype2" "subtype1" "subtype3" "subtype2"
[43] "subtype1" "subtype3" "subtype3" "subtype2" "subtype2" "subtype1"
[49] "subtype1" "subtype3" "subtype1" "subtype1" "subtype1" "subtype3"
D2V2, continuous
D2V3, multiclass
D2V4, binary
[1] "tbl2"
          cls
clus       [,1] [,2]
  subtype1    5   15
  subtype2    9    6
  subtype3   11    8
     clus
vv    subtype1 subtype2 subtype3
  NO         5        9       11
  YES       15        6        8
D2V5, binary
[1] "tbl2"
          cls
clus       [,1] [,2]
  subtype1   18    2
  subtype2    9    6
  subtype3    9   10
     clus
vv    subtype1 subtype2 subtype3
  NO         2        6       10
  YES       18        9        9

Clustering(3) Variable = METHLYATION_CNMF
D3V1, survival
  [1] "subtype1" "subtype2" "subtype2" "subtype1" "subtype3" "subtype1"
  [7] "subtype1" "subtype2" "subtype2" "subtype1" "subtype1" "subtype1"
 [13] "subtype3" "subtype3" "subtype1" "subtype3" "subtype2" "subtype3"
 [19] "subtype1" "subtype2" "subtype3" "subtype2" "subtype1" "subtype3"
 [25] "subtype3" "subtype3" "subtype1" "subtype3" "subtype1" "subtype1"
 [31] "subtype1" "subtype1" "subtype3" "subtype1" "subtype1" "subtype3"
 [37] "subtype3" "subtype1" "subtype3" "subtype3" "subtype3" "subtype2"
 [43] "subtype3" "subtype3" "subtype3" "subtype3" "subtype1" "subtype1"
 [49] "subtype2" "subtype1" "subtype3" "subtype2" "subtype3" "subtype1"
 [55] "subtype2" "subtype3" "subtype1" "subtype1" "subtype1" "subtype2"
 [61] "subtype1" "subtype1" "subtype3" "subtype1" "subtype3" "subtype2"
 [67] "subtype3" "subtype1" "subtype2" "subtype1" "subtype1" "subtype1"
 [73] "subtype1" "subtype2" "subtype1" "subtype3" "subtype3" "subtype3"
 [79] "subtype1" "subtype1" "subtype2" "subtype3" "subtype1" "subtype1"
 [85] "subtype2" "subtype1" "subtype2" "subtype1" "subtype1" "subtype2"
 [91] "subtype3" "subtype3" "subtype1" "subtype1" "subtype3" "subtype3"
 [97] "subtype3" "subtype3" "subtype1" "subtype3" "subtype3" "subtype2"
[103] "subtype3" "subtype1" "subtype2" "subtype3" "subtype2" "subtype2"
[109] "subtype2" "subtype3" "subtype3" "subtype1" "subtype2" "subtype3"
[115] "subtype2" "subtype1" "subtype1" "subtype3" "subtype3" "subtype3"
[121] "subtype1" "subtype3" "subtype1" "subtype3" "subtype3" "subtype2"
[127] "subtype2" "subtype3" "subtype2" "subtype3" "subtype2" "subtype2"
[133] "subtype2" "subtype1" "subtype2" "subtype3" "subtype2" "subtype3"
[139] "subtype1" "subtype1" "subtype1" "subtype3" "subtype1" "subtype3"
[145] "subtype2" "subtype1" "subtype3" "subtype1" "subtype2" "subtype2"
[151] "subtype1" "subtype3" "subtype1" "subtype3" "subtype3" "subtype2"
[157] "subtype1" "subtype3" "subtype2" "subtype3" "subtype3" "subtype1"
[163] "subtype3" "subtype2" "subtype1" "subtype3" "subtype2" "subtype2"
[169] "subtype1" "subtype3" "subtype3" "subtype1" "subtype2" "subtype1"
[175] "subtype3" "subtype3" "subtype3" "subtype2" "subtype3" "subtype2"
[181] "subtype3" "subtype1" "subtype3" "subtype2" "subtype2" "subtype2"
[187] "subtype3" "subtype1" "subtype1" "subtype1" "subtype3" "subtype2"
[193] "subtype2" "subtype2" "subtype1" "subtype3" "subtype2" "subtype2"
[199] "subtype3" "subtype3" "subtype3" "subtype3" "subtype1" "subtype3"
[205] "subtype2" "subtype2" "subtype3" "subtype2" "subtype3" "subtype1"
[211] "subtype2" "subtype3" "subtype2" "subtype3" "subtype3" "subtype2"
[217] "subtype3" "subtype3" "subtype3" "subtype1" "subtype1" "subtype1"
[223] "subtype3" "subtype3" "subtype2" "subtype2" "subtype3" "subtype1"
[229] "subtype1" "subtype3" "subtype3" "subtype2" "subtype1" "subtype2"
[235] "subtype1" "subtype2" "subtype1" "subtype2" "subtype2" "subtype1"
[241] "subtype1" "subtype1" "subtype2" "subtype2" "subtype3" "subtype1"
[247] "subtype3" "subtype1" "subtype3" "subtype1" "subtype3" "subtype1"
[253] "subtype3" "subtype2" "subtype3" "subtype3" "subtype1" "subtype3"
[259] "subtype1" "subtype2" "subtype2" "subtype2" "subtype1" "subtype3"
[265] "subtype1" "subtype3" "subtype2" "subtype3" "subtype3" "subtype3"
[271] "subtype1" "subtype3" "subtype3" "subtype1" "subtype1" "subtype1"
[277] "subtype3" "subtype2" "subtype1" "subtype3" "subtype3" "subtype1"
[283] "subtype3" "subtype3" "subtype3" "subtype2" "subtype1" "subtype1"
[289] "subtype3" "subtype3" "subtype1" "subtype1" "subtype3" "subtype1"
[295] "subtype1" "subtype1" "subtype1" "subtype1" "subtype3" "subtype3"
[301] "subtype1" "subtype1" "subtype1" "subtype1" "subtype1" "subtype3"
[307] "subtype1" "subtype2" "subtype1"
  [1] "subtype1" "subtype2" "subtype2" "subtype1" "subtype3" "subtype1"
  [7] "subtype1" "subtype2" "subtype2" "subtype1" "subtype1" "subtype1"
 [13] "subtype3" "subtype3" "subtype1" "subtype3" "subtype2" "subtype3"
 [19] "subtype1" "subtype2" "subtype3" "subtype2" "subtype1" "subtype3"
 [25] "subtype3" "subtype3" "subtype1" "subtype3" "subtype1" "subtype1"
 [31] "subtype1" "subtype1" "subtype3" "subtype1" "subtype1" "subtype3"
 [37] "subtype3" "subtype1" "subtype3" "subtype3" "subtype3" "subtype2"
 [43] "subtype3" "subtype3" "subtype3" "subtype3" "subtype1" "subtype1"
 [49] "subtype2" "subtype1" "subtype3" "subtype2" "subtype3" "subtype1"
 [55] "subtype2" "subtype3" "subtype1" "subtype1" "subtype1" "subtype2"
 [61] "subtype1" "subtype1" "subtype3" "subtype1" "subtype3" "subtype2"
 [67] "subtype3" "subtype1" "subtype2" "subtype1" "subtype1" "subtype1"
 [73] "subtype1" "subtype2" "subtype1" "subtype3" "subtype3" "subtype3"
 [79] "subtype1" "subtype1" "subtype2" "subtype3" "subtype1" "subtype1"
 [85] "subtype2" "subtype1" "subtype2" "subtype1" "subtype1" "subtype2"
 [91] "subtype3" "subtype3" "subtype1" "subtype1" "subtype3" "subtype3"
 [97] "subtype3" "subtype3" "subtype1" "subtype3" "subtype3" "subtype2"
[103] "subtype3" "subtype1" "subtype2" "subtype3" "subtype2" "subtype2"
[109] "subtype2" "subtype3" "subtype3" "subtype1" "subtype2" "subtype3"
[115] "subtype2" "subtype1" "subtype1" "subtype3" "subtype3" "subtype3"
[121] "subtype1" "subtype3" "subtype1" "subtype3" "subtype3" "subtype2"
[127] "subtype2" "subtype3" "subtype2" "subtype3" "subtype2" "subtype2"
[133] "subtype2" "subtype1" "subtype2" "subtype3" "subtype2" "subtype3"
[139] "subtype1" "subtype1" "subtype1" "subtype3" "subtype1" "subtype3"
[145] "subtype2" "subtype1" "subtype3" "subtype1" "subtype2" "subtype2"
[151] "subtype1" "subtype3" "subtype1" "subtype3" "subtype3" "subtype2"
[157] "subtype1" "subtype3" "subtype2" "subtype3" "subtype3" "subtype1"
[163] "subtype3" "subtype2" "subtype1" "subtype3" "subtype2" "subtype2"
[169] "subtype1" "subtype3" "subtype3" "subtype1" "subtype2" "subtype1"
[175] "subtype3" "subtype3" "subtype3" "subtype2" "subtype3" "subtype2"
[181] "subtype3" "subtype1" "subtype3" "subtype2" "subtype2" "subtype2"
[187] "subtype3" "subtype1" "subtype1" "subtype1" "subtype3" "subtype2"
[193] "subtype2" "subtype2" "subtype1" "subtype3" "subtype2" "subtype2"
[199] "subtype3" "subtype3" "subtype3" "subtype3" "subtype1" "subtype3"
[205] "subtype2" "subtype2" "subtype3" "subtype2" "subtype3" "subtype1"
[211] "subtype2" "subtype3" "subtype2" "subtype3" "subtype3" "subtype2"
[217] "subtype3" "subtype3" "subtype3" "subtype1" "subtype1" "subtype1"
[223] "subtype3" "subtype3" "subtype2" "subtype2" "subtype3" "subtype1"
[229] "subtype1" "subtype3" "subtype3" "subtype2" "subtype1" "subtype2"
[235] "subtype1" "subtype2" "subtype1" "subtype2" "subtype2" "subtype1"
[241] "subtype1" "subtype1" "subtype2" "subtype2" "subtype3" "subtype1"
[247] "subtype3" "subtype1" "subtype3" "subtype1" "subtype3" "subtype1"
[253] "subtype3" "subtype2" "subtype3" "subtype3" "subtype1" "subtype3"
[259] "subtype1" "subtype2" "subtype2" "subtype2" "subtype1" "subtype3"
[265] "subtype1" "subtype3" "subtype2" "subtype3" "subtype3" "subtype3"
[271] "subtype1" "subtype3" "subtype3" "subtype1" "subtype1" "subtype1"
[277] "subtype3" "subtype2" "subtype1" "subtype3" "subtype3" "subtype1"
[283] "subtype3" "subtype3" "subtype3" "subtype2" "subtype1" "subtype1"
[289] "subtype3" "subtype3" "subtype1" "subtype1" "subtype3" "subtype1"
[295] "subtype1" "subtype1" "subtype1" "subtype1" "subtype3" "subtype3"
[301] "subtype1" "subtype1" "subtype1" "subtype1" "subtype1" "subtype3"
[307] "subtype1" "subtype2" "subtype1"
  [1] "subtype1" "subtype2" "subtype2" "subtype1" "subtype3" "subtype1"
  [7] "subtype1" "subtype2" "subtype2" "subtype1" "subtype1" "subtype1"
 [13] "subtype3" "subtype3" "subtype1" "subtype3" "subtype2" "subtype3"
 [19] "subtype1" "subtype2" "subtype3" "subtype2" "subtype1" "subtype3"
 [25] "subtype3" "subtype3" "subtype1" "subtype3" "subtype1" "subtype1"
 [31] "subtype1" "subtype1" "subtype3" "subtype1" "subtype1" "subtype3"
 [37] "subtype3" "subtype1" "subtype3" "subtype3" "subtype3" "subtype2"
 [43] "subtype3" "subtype3" "subtype3" "subtype3" "subtype1" "subtype1"
 [49] "subtype2" "subtype1" "subtype3" "subtype2" "subtype3" "subtype1"
 [55] "subtype2" "subtype3" "subtype1" "subtype1" "subtype1" "subtype2"
 [61] "subtype1" "subtype1" "subtype3" "subtype1" "subtype3" "subtype2"
 [67] "subtype3" "subtype1" "subtype2" "subtype1" "subtype1" "subtype1"
 [73] "subtype1" "subtype2" "subtype1" "subtype3" "subtype3" "subtype3"
 [79] "subtype1" "subtype1" "subtype2" "subtype3" "subtype1" "subtype1"
 [85] "subtype2" "subtype1" "subtype2" "subtype1" "subtype1" "subtype2"
 [91] "subtype3" "subtype3" "subtype1" "subtype1" "subtype3" "subtype3"
 [97] "subtype3" "subtype3" "subtype1" "subtype3" "subtype3" "subtype2"
[103] "subtype3" "subtype1" "subtype2" "subtype3" "subtype2" "subtype2"
[109] "subtype2" "subtype3" "subtype3" "subtype1" "subtype2" "subtype3"
[115] "subtype2" "subtype1" "subtype1" "subtype3" "subtype3" "subtype3"
[121] "subtype1" "subtype3" "subtype1" "subtype3" "subtype3" "subtype2"
[127] "subtype2" "subtype3" "subtype2" "subtype3" "subtype2" "subtype2"
[133] "subtype2" "subtype1" "subtype2" "subtype3" "subtype2" "subtype3"
[139] "subtype1" "subtype1" "subtype1" "subtype3" "subtype1" "subtype3"
[145] "subtype2" "subtype1" "subtype3" "subtype1" "subtype2" "subtype2"
[151] "subtype1" "subtype3" "subtype1" "subtype3" "subtype3" "subtype2"
[157] "subtype1" "subtype3" "subtype2" "subtype3" "subtype3" "subtype1"
[163] "subtype3" "subtype2" "subtype1" "subtype3" "subtype2" "subtype2"
[169] "subtype1" "subtype3" "subtype3" "subtype1" "subtype2" "subtype1"
[175] "subtype3" "subtype3" "subtype3" "subtype2" "subtype3" "subtype2"
[181] "subtype3" "subtype1" "subtype3" "subtype2" "subtype2" "subtype2"
[187] "subtype3" "subtype1" "subtype1" "subtype1" "subtype3" "subtype2"
[193] "subtype2" "subtype2" "subtype1" "subtype3" "subtype2" "subtype2"
[199] "subtype3" "subtype3" "subtype3" "subtype3" "subtype1" "subtype3"
[205] "subtype2" "subtype2" "subtype3" "subtype2" "subtype3" "subtype1"
[211] "subtype2" "subtype3" "subtype2" "subtype3" "subtype3" "subtype2"
[217] "subtype3" "subtype3" "subtype3" "subtype1" "subtype1" "subtype1"
[223] "subtype3" "subtype3" "subtype2" "subtype2" "subtype3" "subtype1"
[229] "subtype1" "subtype3" "subtype3" "subtype2" "subtype1" "subtype2"
[235] "subtype1" "subtype2" "subtype1" "subtype2" "subtype2" "subtype1"
[241] "subtype1" "subtype1" "subtype2" "subtype2" "subtype3" "subtype1"
[247] "subtype3" "subtype1" "subtype3" "subtype1" "subtype3" "subtype1"
[253] "subtype3" "subtype2" "subtype3" "subtype3" "subtype1" "subtype3"
[259] "subtype1" "subtype2" "subtype2" "subtype2" "subtype1" "subtype3"
[265] "subtype1" "subtype3" "subtype2" "subtype3" "subtype3" "subtype3"
[271] "subtype1" "subtype3" "subtype3" "subtype1" "subtype1" "subtype1"
[277] "subtype3" "subtype2" "subtype1" "subtype3" "subtype3" "subtype1"
[283] "subtype3" "subtype3" "subtype3" "subtype2" "subtype1" "subtype1"
[289] "subtype3" "subtype3" "subtype1" "subtype1" "subtype3" "subtype1"
[295] "subtype1" "subtype1" "subtype1" "subtype1" "subtype3" "subtype3"
[301] "subtype1" "subtype1" "subtype1" "subtype1" "subtype1" "subtype3"
[307] "subtype1" "subtype2" "subtype1"
D3V2, continuous
D3V3, multiclass
D3V4, binary
[1] "tbl2"
          cls
clus       [,1] [,2]
  subtype1   32   83
  subtype2   11   65
  subtype3   36   86
     clus
vv    subtype1 subtype2 subtype3
  NO        32       11       36
  YES       83       65       86
D3V5, binary
[1] "tbl2"
          cls
clus       [,1] [,2]
  subtype1   78   37
  subtype2   66   10
  subtype3   99   23
     clus
vv    subtype1 subtype2 subtype3
  NO        37       10       23
  YES       78       66       99

Clustering(4) Variable = MRNASEQ_CNMF
D4V1, survival
  [1] "subtype1" "subtype1" "subtype1" "subtype1" "subtype2" "subtype1"
  [7] "subtype3" "subtype2" "subtype2" "subtype2" "subtype1" "subtype3"
 [13] "subtype2" "subtype3" "subtype3" "subtype2" "subtype1" "subtype3"
 [19] "subtype3" "subtype3" "subtype3" "subtype1" "subtype3" "subtype2"
 [25] "subtype3" "subtype2" "subtype3" "subtype3" "subtype1" "subtype2"
 [31] "subtype1" "subtype3" "subtype3" "subtype1" "subtype1" "subtype1"
 [37] "subtype1" "subtype1" "subtype1" "subtype1" "subtype1" "subtype3"
 [43] "subtype2" "subtype1" "subtype1" "subtype1" "subtype1" "subtype3"
 [49] "subtype1" "subtype3" "subtype1" "subtype1" "subtype2" "subtype3"
 [55] "subtype1" "subtype3" "subtype2" "subtype2" "subtype3" "subtype3"
 [61] "subtype1" "subtype1" "subtype3" "subtype3" "subtype1" "subtype3"
 [67] "subtype3" "subtype3" "subtype1" "subtype1" "subtype2" "subtype2"
 [73] "subtype2" "subtype2" "subtype3" "subtype3" "subtype3" "subtype3"
 [79] "subtype3" "subtype1" "subtype1" "subtype1" "subtype3" "subtype2"
 [85] "subtype3" "subtype1" "subtype1" "subtype3" "subtype3" "subtype1"
 [91] "subtype1" "subtype1" "subtype2" "subtype1" "subtype1" "subtype2"
 [97] "subtype1" "subtype2" "subtype3" "subtype3" "subtype1" "subtype1"
[103] "subtype3" "subtype2" "subtype2" "subtype3" "subtype2" "subtype3"
[109] "subtype3" "subtype3" "subtype2" "subtype2" "subtype1" "subtype1"
[115] "subtype3" "subtype3" "subtype1" "subtype1" "subtype3" "subtype2"
[121] "subtype2" "subtype1" "subtype2" "subtype2" "subtype3" "subtype2"
[127] "subtype3" "subtype2" "subtype3" "subtype3" "subtype2" "subtype3"
[133] "subtype2" "subtype3" "subtype2" "subtype1" "subtype1" "subtype1"
[139] "subtype3" "subtype3" "subtype2" "subtype2" "subtype3" "subtype2"
[145] "subtype1" "subtype2" "subtype3" "subtype2" "subtype2" "subtype2"
[151] "subtype2" "subtype3" "subtype3" "subtype1" "subtype3" "subtype1"
[157] "subtype3" "subtype1" "subtype3" "subtype2" "subtype2" "subtype3"
[163] "subtype2" "subtype2" "subtype2" "subtype3" "subtype2" "subtype2"
[169] "subtype2" "subtype1" "subtype1" "subtype1" "subtype1" "subtype2"
[175] "subtype2" "subtype3" "subtype1" "subtype1" "subtype2" "subtype3"
[181] "subtype2" "subtype2" "subtype2" "subtype1" "subtype3" "subtype3"
[187] "subtype1" "subtype3" "subtype3" "subtype1" "subtype2" "subtype1"
[193] "subtype3" "subtype2" "subtype3" "subtype1" "subtype1" "subtype3"
[199] "subtype2" "subtype1" "subtype3" "subtype2" "subtype1" "subtype3"
[205] "subtype2" "subtype1" "subtype3" "subtype1" "subtype2" "subtype1"
[211] "subtype3" "subtype3" "subtype2" "subtype2" "subtype3" "subtype2"
[217] "subtype1" "subtype1" "subtype2" "subtype3" "subtype2" "subtype2"
[223] "subtype2" "subtype1" "subtype1" "subtype1" "subtype1" "subtype2"
[229] "subtype3" "subtype3" "subtype1" "subtype3" "subtype2" "subtype1"
[235] "subtype2" "subtype1" "subtype2" "subtype3" "subtype1" "subtype2"
[241] "subtype2" "subtype3" "subtype2" "subtype2" "subtype1" "subtype1"
[247] "subtype3" "subtype3" "subtype2" "subtype2" "subtype3" "subtype2"
[253] "subtype2" "subtype2" "subtype1" "subtype1" "subtype1" "subtype3"
[259] "subtype1" "subtype1" "subtype1" "subtype1" "subtype1" "subtype1"
[265] "subtype1" "subtype1"
  [1] "subtype1" "subtype1" "subtype1" "subtype1" "subtype2" "subtype1"
  [7] "subtype3" "subtype2" "subtype2" "subtype2" "subtype1" "subtype3"
 [13] "subtype2" "subtype3" "subtype3" "subtype2" "subtype1" "subtype3"
 [19] "subtype3" "subtype3" "subtype3" "subtype1" "subtype3" "subtype2"
 [25] "subtype3" "subtype2" "subtype3" "subtype3" "subtype1" "subtype2"
 [31] "subtype1" "subtype3" "subtype3" "subtype1" "subtype1" "subtype1"
 [37] "subtype1" "subtype1" "subtype1" "subtype1" "subtype1" "subtype3"
 [43] "subtype2" "subtype1" "subtype1" "subtype1" "subtype1" "subtype3"
 [49] "subtype1" "subtype3" "subtype1" "subtype1" "subtype2" "subtype3"
 [55] "subtype1" "subtype3" "subtype2" "subtype2" "subtype3" "subtype3"
 [61] "subtype1" "subtype1" "subtype3" "subtype3" "subtype1" "subtype3"
 [67] "subtype3" "subtype3" "subtype1" "subtype1" "subtype2" "subtype2"
 [73] "subtype2" "subtype2" "subtype3" "subtype3" "subtype3" "subtype3"
 [79] "subtype3" "subtype1" "subtype1" "subtype1" "subtype3" "subtype2"
 [85] "subtype3" "subtype1" "subtype1" "subtype3" "subtype3" "subtype1"
 [91] "subtype1" "subtype1" "subtype2" "subtype1" "subtype1" "subtype2"
 [97] "subtype1" "subtype2" "subtype3" "subtype3" "subtype1" "subtype1"
[103] "subtype3" "subtype2" "subtype2" "subtype3" "subtype2" "subtype3"
[109] "subtype3" "subtype3" "subtype2" "subtype2" "subtype1" "subtype1"
[115] "subtype3" "subtype3" "subtype1" "subtype1" "subtype3" "subtype2"
[121] "subtype2" "subtype1" "subtype2" "subtype2" "subtype3" "subtype2"
[127] "subtype3" "subtype2" "subtype3" "subtype3" "subtype2" "subtype3"
[133] "subtype2" "subtype3" "subtype2" "subtype1" "subtype1" "subtype1"
[139] "subtype3" "subtype3" "subtype2" "subtype2" "subtype3" "subtype2"
[145] "subtype1" "subtype2" "subtype3" "subtype2" "subtype2" "subtype2"
[151] "subtype2" "subtype3" "subtype3" "subtype1" "subtype3" "subtype1"
[157] "subtype3" "subtype1" "subtype3" "subtype2" "subtype2" "subtype3"
[163] "subtype2" "subtype2" "subtype2" "subtype3" "subtype2" "subtype2"
[169] "subtype2" "subtype1" "subtype1" "subtype1" "subtype1" "subtype2"
[175] "subtype2" "subtype3" "subtype1" "subtype1" "subtype2" "subtype3"
[181] "subtype2" "subtype2" "subtype2" "subtype1" "subtype3" "subtype3"
[187] "subtype1" "subtype3" "subtype3" "subtype1" "subtype2" "subtype1"
[193] "subtype3" "subtype2" "subtype3" "subtype1" "subtype1" "subtype3"
[199] "subtype2" "subtype1" "subtype3" "subtype2" "subtype1" "subtype3"
[205] "subtype2" "subtype1" "subtype3" "subtype1" "subtype2" "subtype1"
[211] "subtype3" "subtype3" "subtype2" "subtype2" "subtype3" "subtype2"
[217] "subtype1" "subtype1" "subtype2" "subtype3" "subtype2" "subtype2"
[223] "subtype2" "subtype1" "subtype1" "subtype1" "subtype1" "subtype2"
[229] "subtype3" "subtype3" "subtype1" "subtype3" "subtype2" "subtype1"
[235] "subtype2" "subtype1" "subtype2" "subtype3" "subtype1" "subtype2"
[241] "subtype2" "subtype3" "subtype2" "subtype2" "subtype1" "subtype1"
[247] "subtype3" "subtype3" "subtype2" "subtype2" "subtype3" "subtype2"
[253] "subtype2" "subtype2" "subtype1" "subtype1" "subtype1" "subtype3"
[259] "subtype1" "subtype1" "subtype1" "subtype1" "subtype1" "subtype1"
[265] "subtype1" "subtype1"
  [1] "subtype1" "subtype1" "subtype1" "subtype1" "subtype2" "subtype1"
  [7] "subtype3" "subtype2" "subtype2" "subtype2" "subtype1" "subtype3"
 [13] "subtype2" "subtype3" "subtype3" "subtype2" "subtype1" "subtype3"
 [19] "subtype3" "subtype3" "subtype3" "subtype1" "subtype3" "subtype2"
 [25] "subtype3" "subtype2" "subtype3" "subtype3" "subtype1" "subtype2"
 [31] "subtype1" "subtype3" "subtype3" "subtype1" "subtype1" "subtype1"
 [37] "subtype1" "subtype1" "subtype1" "subtype1" "subtype1" "subtype3"
 [43] "subtype2" "subtype1" "subtype1" "subtype1" "subtype1" "subtype3"
 [49] "subtype1" "subtype3" "subtype1" "subtype1" "subtype2" "subtype3"
 [55] "subtype1" "subtype3" "subtype2" "subtype2" "subtype3" "subtype3"
 [61] "subtype1" "subtype1" "subtype3" "subtype3" "subtype1" "subtype3"
 [67] "subtype3" "subtype3" "subtype1" "subtype1" "subtype2" "subtype2"
 [73] "subtype2" "subtype2" "subtype3" "subtype3" "subtype3" "subtype3"
 [79] "subtype3" "subtype1" "subtype1" "subtype1" "subtype3" "subtype2"
 [85] "subtype3" "subtype1" "subtype1" "subtype3" "subtype3" "subtype1"
 [91] "subtype1" "subtype1" "subtype2" "subtype1" "subtype1" "subtype2"
 [97] "subtype1" "subtype2" "subtype3" "subtype3" "subtype1" "subtype1"
[103] "subtype3" "subtype2" "subtype2" "subtype3" "subtype2" "subtype3"
[109] "subtype3" "subtype3" "subtype2" "subtype2" "subtype1" "subtype1"
[115] "subtype3" "subtype3" "subtype1" "subtype1" "subtype3" "subtype2"
[121] "subtype2" "subtype1" "subtype2" "subtype2" "subtype3" "subtype2"
[127] "subtype3" "subtype2" "subtype3" "subtype3" "subtype2" "subtype3"
[133] "subtype2" "subtype3" "subtype2" "subtype1" "subtype1" "subtype1"
[139] "subtype3" "subtype3" "subtype2" "subtype2" "subtype3" "subtype2"
[145] "subtype1" "subtype2" "subtype3" "subtype2" "subtype2" "subtype2"
[151] "subtype2" "subtype3" "subtype3" "subtype1" "subtype3" "subtype1"
[157] "subtype3" "subtype1" "subtype3" "subtype2" "subtype2" "subtype3"
[163] "subtype2" "subtype2" "subtype2" "subtype3" "subtype2" "subtype2"
[169] "subtype2" "subtype1" "subtype1" "subtype1" "subtype1" "subtype2"
[175] "subtype2" "subtype3" "subtype1" "subtype1" "subtype2" "subtype3"
[181] "subtype2" "subtype2" "subtype2" "subtype1" "subtype3" "subtype3"
[187] "subtype1" "subtype3" "subtype3" "subtype1" "subtype2" "subtype1"
[193] "subtype3" "subtype2" "subtype3" "subtype1" "subtype1" "subtype3"
[199] "subtype2" "subtype1" "subtype3" "subtype2" "subtype1" "subtype3"
[205] "subtype2" "subtype1" "subtype3" "subtype1" "subtype2" "subtype1"
[211] "subtype3" "subtype3" "subtype2" "subtype2" "subtype3" "subtype2"
[217] "subtype1" "subtype1" "subtype2" "subtype3" "subtype2" "subtype2"
[223] "subtype2" "subtype1" "subtype1" "subtype1" "subtype1" "subtype2"
[229] "subtype3" "subtype3" "subtype1" "subtype3" "subtype2" "subtype1"
[235] "subtype2" "subtype1" "subtype2" "subtype3" "subtype1" "subtype2"
[241] "subtype2" "subtype3" "subtype2" "subtype2" "subtype1" "subtype1"
[247] "subtype3" "subtype3" "subtype2" "subtype2" "subtype3" "subtype2"
[253] "subtype2" "subtype2" "subtype1" "subtype1" "subtype1" "subtype3"
[259] "subtype1" "subtype1" "subtype1" "subtype1" "subtype1" "subtype1"
[265] "subtype1" "subtype1"
D4V2, continuous
D4V3, multiclass
D4V4, binary
[1] "tbl2"
          cls
clus       [,1] [,2]
  subtype1   44   52
  subtype2   21   62
  subtype3   34   53
     clus
vv    subtype1 subtype2 subtype3
  NO        44       21       34
  YES       52       62       53
D4V5, binary
[1] "tbl2"
          cls
clus       [,1] [,2]
  subtype1   51   45
  subtype2   64   19
  subtype3   68   19
     clus
vv    subtype1 subtype2 subtype3
  NO        45       19       19
  YES       51       64       68

Clustering(5) Variable = MRNASEQ_CHIERARCHICAL
D5V1, survival
  [1] "subtype1" "subtype1" "subtype1" "subtype1" "subtype2" "subtype3"
  [7] "subtype2" "subtype2" "subtype2" "subtype2" "subtype1" "subtype3"
 [13] "subtype2" "subtype3" "subtype3" "subtype2" "subtype1" "subtype3"
 [19] "subtype3" "subtype1" "subtype3" "subtype1" "subtype1" "subtype2"
 [25] "subtype2" "subtype2" "subtype2" "subtype3" "subtype1" "subtype2"
 [31] "subtype1" "subtype3" "subtype3" "subtype1" "subtype1" "subtype1"
 [37] "subtype1" "subtype1" "subtype1" "subtype1" "subtype1" "subtype3"
 [43] "subtype2" "subtype1" "subtype1" "subtype1" "subtype1" "subtype3"
 [49] "subtype1" "subtype3" "subtype1" "subtype1" "subtype2" "subtype3"
 [55] "subtype3" "subtype3" "subtype2" "subtype2" "subtype3" "subtype3"
 [61] "subtype3" "subtype1" "subtype3" "subtype3" "subtype1" "subtype3"
 [67] "subtype2" "subtype1" "subtype1" "subtype1" "subtype3" "subtype3"
 [73] "subtype2" "subtype2" "subtype3" "subtype3" "subtype3" "subtype3"
 [79] "subtype3" "subtype1" "subtype1" "subtype1" "subtype3" "subtype2"
 [85] "subtype3" "subtype1" "subtype1" "subtype3" "subtype1" "subtype1"
 [91] "subtype1" "subtype1" "subtype2" "subtype1" "subtype1" "subtype1"
 [97] "subtype1" "subtype2" "subtype3" "subtype3" "subtype1" "subtype1"
[103] "subtype3" "subtype2" "subtype2" "subtype2" "subtype2" "subtype1"
[109] "subtype3" "subtype3" "subtype2" "subtype2" "subtype1" "subtype1"
[115] "subtype2" "subtype3" "subtype1" "subtype1" "subtype3" "subtype2"
[121] "subtype1" "subtype1" "subtype2" "subtype2" "subtype3" "subtype2"
[127] "subtype3" "subtype2" "subtype1" "subtype3" "subtype2" "subtype1"
[133] "subtype2" "subtype3" "subtype2" "subtype1" "subtype1" "subtype1"
[139] "subtype3" "subtype3" "subtype2" "subtype2" "subtype3" "subtype3"
[145] "subtype1" "subtype2" "subtype3" "subtype2" "subtype2" "subtype2"
[151] "subtype2" "subtype3" "subtype3" "subtype3" "subtype3" "subtype1"
[157] "subtype3" "subtype3" "subtype3" "subtype2" "subtype2" "subtype3"
[163] "subtype2" "subtype2" "subtype2" "subtype3" "subtype2" "subtype2"
[169] "subtype2" "subtype1" "subtype1" "subtype1" "subtype3" "subtype2"
[175] "subtype2" "subtype3" "subtype1" "subtype1" "subtype2" "subtype3"
[181] "subtype2" "subtype2" "subtype2" "subtype1" "subtype3" "subtype3"
[187] "subtype1" "subtype3" "subtype3" "subtype1" "subtype2" "subtype1"
[193] "subtype3" "subtype2" "subtype3" "subtype1" "subtype3" "subtype3"
[199] "subtype2" "subtype1" "subtype3" "subtype2" "subtype1" "subtype3"
[205] "subtype2" "subtype1" "subtype3" "subtype1" "subtype2" "subtype1"
[211] "subtype3" "subtype3" "subtype2" "subtype2" "subtype3" "subtype2"
[217] "subtype1" "subtype1" "subtype2" "subtype3" "subtype2" "subtype2"
[223] "subtype2" "subtype1" "subtype1" "subtype1" "subtype1" "subtype2"
[229] "subtype3" "subtype3" "subtype1" "subtype2" "subtype2" "subtype1"
[235] "subtype3" "subtype3" "subtype2" "subtype3" "subtype1" "subtype2"
[241] "subtype2" "subtype3" "subtype2" "subtype2" "subtype3" "subtype1"
[247] "subtype3" "subtype3" "subtype3" "subtype2" "subtype3" "subtype2"
[253] "subtype3" "subtype2" "subtype1" "subtype1" "subtype1" "subtype3"
[259] "subtype1" "subtype1" "subtype1" "subtype1" "subtype1" "subtype1"
[265] "subtype1" "subtype1"
  [1] "subtype1" "subtype1" "subtype1" "subtype1" "subtype2" "subtype3"
  [7] "subtype2" "subtype2" "subtype2" "subtype2" "subtype1" "subtype3"
 [13] "subtype2" "subtype3" "subtype3" "subtype2" "subtype1" "subtype3"
 [19] "subtype3" "subtype1" "subtype3" "subtype1" "subtype1" "subtype2"
 [25] "subtype2" "subtype2" "subtype2" "subtype3" "subtype1" "subtype2"
 [31] "subtype1" "subtype3" "subtype3" "subtype1" "subtype1" "subtype1"
 [37] "subtype1" "subtype1" "subtype1" "subtype1" "subtype1" "subtype3"
 [43] "subtype2" "subtype1" "subtype1" "subtype1" "subtype1" "subtype3"
 [49] "subtype1" "subtype3" "subtype1" "subtype1" "subtype2" "subtype3"
 [55] "subtype3" "subtype3" "subtype2" "subtype2" "subtype3" "subtype3"
 [61] "subtype3" "subtype1" "subtype3" "subtype3" "subtype1" "subtype3"
 [67] "subtype2" "subtype1" "subtype1" "subtype1" "subtype3" "subtype3"
 [73] "subtype2" "subtype2" "subtype3" "subtype3" "subtype3" "subtype3"
 [79] "subtype3" "subtype1" "subtype1" "subtype1" "subtype3" "subtype2"
 [85] "subtype3" "subtype1" "subtype1" "subtype3" "subtype1" "subtype1"
 [91] "subtype1" "subtype1" "subtype2" "subtype1" "subtype1" "subtype1"
 [97] "subtype1" "subtype2" "subtype3" "subtype3" "subtype1" "subtype1"
[103] "subtype3" "subtype2" "subtype2" "subtype2" "subtype2" "subtype1"
[109] "subtype3" "subtype3" "subtype2" "subtype2" "subtype1" "subtype1"
[115] "subtype2" "subtype3" "subtype1" "subtype1" "subtype3" "subtype2"
[121] "subtype1" "subtype1" "subtype2" "subtype2" "subtype3" "subtype2"
[127] "subtype3" "subtype2" "subtype1" "subtype3" "subtype2" "subtype1"
[133] "subtype2" "subtype3" "subtype2" "subtype1" "subtype1" "subtype1"
[139] "subtype3" "subtype3" "subtype2" "subtype2" "subtype3" "subtype3"
[145] "subtype1" "subtype2" "subtype3" "subtype2" "subtype2" "subtype2"
[151] "subtype2" "subtype3" "subtype3" "subtype3" "subtype3" "subtype1"
[157] "subtype3" "subtype3" "subtype3" "subtype2" "subtype2" "subtype3"
[163] "subtype2" "subtype2" "subtype2" "subtype3" "subtype2" "subtype2"
[169] "subtype2" "subtype1" "subtype1" "subtype1" "subtype3" "subtype2"
[175] "subtype2" "subtype3" "subtype1" "subtype1" "subtype2" "subtype3"
[181] "subtype2" "subtype2" "subtype2" "subtype1" "subtype3" "subtype3"
[187] "subtype1" "subtype3" "subtype3" "subtype1" "subtype2" "subtype1"
[193] "subtype3" "subtype2" "subtype3" "subtype1" "subtype3" "subtype3"
[199] "subtype2" "subtype1" "subtype3" "subtype2" "subtype1" "subtype3"
[205] "subtype2" "subtype1" "subtype3" "subtype1" "subtype2" "subtype1"
[211] "subtype3" "subtype3" "subtype2" "subtype2" "subtype3" "subtype2"
[217] "subtype1" "subtype1" "subtype2" "subtype3" "subtype2" "subtype2"
[223] "subtype2" "subtype1" "subtype1" "subtype1" "subtype1" "subtype2"
[229] "subtype3" "subtype3" "subtype1" "subtype2" "subtype2" "subtype1"
[235] "subtype3" "subtype3" "subtype2" "subtype3" "subtype1" "subtype2"
[241] "subtype2" "subtype3" "subtype2" "subtype2" "subtype3" "subtype1"
[247] "subtype3" "subtype3" "subtype3" "subtype2" "subtype3" "subtype2"
[253] "subtype3" "subtype2" "subtype1" "subtype1" "subtype1" "subtype3"
[259] "subtype1" "subtype1" "subtype1" "subtype1" "subtype1" "subtype1"
[265] "subtype1" "subtype1"
  [1] "subtype1" "subtype1" "subtype1" "subtype1" "subtype2" "subtype3"
  [7] "subtype2" "subtype2" "subtype2" "subtype2" "subtype1" "subtype3"
 [13] "subtype2" "subtype3" "subtype3" "subtype2" "subtype1" "subtype3"
 [19] "subtype3" "subtype1" "subtype3" "subtype1" "subtype1" "subtype2"
 [25] "subtype2" "subtype2" "subtype2" "subtype3" "subtype1" "subtype2"
 [31] "subtype1" "subtype3" "subtype3" "subtype1" "subtype1" "subtype1"
 [37] "subtype1" "subtype1" "subtype1" "subtype1" "subtype1" "subtype3"
 [43] "subtype2" "subtype1" "subtype1" "subtype1" "subtype1" "subtype3"
 [49] "subtype1" "subtype3" "subtype1" "subtype1" "subtype2" "subtype3"
 [55] "subtype3" "subtype3" "subtype2" "subtype2" "subtype3" "subtype3"
 [61] "subtype3" "subtype1" "subtype3" "subtype3" "subtype1" "subtype3"
 [67] "subtype2" "subtype1" "subtype1" "subtype1" "subtype3" "subtype3"
 [73] "subtype2" "subtype2" "subtype3" "subtype3" "subtype3" "subtype3"
 [79] "subtype3" "subtype1" "subtype1" "subtype1" "subtype3" "subtype2"
 [85] "subtype3" "subtype1" "subtype1" "subtype3" "subtype1" "subtype1"
 [91] "subtype1" "subtype1" "subtype2" "subtype1" "subtype1" "subtype1"
 [97] "subtype1" "subtype2" "subtype3" "subtype3" "subtype1" "subtype1"
[103] "subtype3" "subtype2" "subtype2" "subtype2" "subtype2" "subtype1"
[109] "subtype3" "subtype3" "subtype2" "subtype2" "subtype1" "subtype1"
[115] "subtype2" "subtype3" "subtype1" "subtype1" "subtype3" "subtype2"
[121] "subtype1" "subtype1" "subtype2" "subtype2" "subtype3" "subtype2"
[127] "subtype3" "subtype2" "subtype1" "subtype3" "subtype2" "subtype1"
[133] "subtype2" "subtype3" "subtype2" "subtype1" "subtype1" "subtype1"
[139] "subtype3" "subtype3" "subtype2" "subtype2" "subtype3" "subtype3"
[145] "subtype1" "subtype2" "subtype3" "subtype2" "subtype2" "subtype2"
[151] "subtype2" "subtype3" "subtype3" "subtype3" "subtype3" "subtype1"
[157] "subtype3" "subtype3" "subtype3" "subtype2" "subtype2" "subtype3"
[163] "subtype2" "subtype2" "subtype2" "subtype3" "subtype2" "subtype2"
[169] "subtype2" "subtype1" "subtype1" "subtype1" "subtype3" "subtype2"
[175] "subtype2" "subtype3" "subtype1" "subtype1" "subtype2" "subtype3"
[181] "subtype2" "subtype2" "subtype2" "subtype1" "subtype3" "subtype3"
[187] "subtype1" "subtype3" "subtype3" "subtype1" "subtype2" "subtype1"
[193] "subtype3" "subtype2" "subtype3" "subtype1" "subtype3" "subtype3"
[199] "subtype2" "subtype1" "subtype3" "subtype2" "subtype1" "subtype3"
[205] "subtype2" "subtype1" "subtype3" "subtype1" "subtype2" "subtype1"
[211] "subtype3" "subtype3" "subtype2" "subtype2" "subtype3" "subtype2"
[217] "subtype1" "subtype1" "subtype2" "subtype3" "subtype2" "subtype2"
[223] "subtype2" "subtype1" "subtype1" "subtype1" "subtype1" "subtype2"
[229] "subtype3" "subtype3" "subtype1" "subtype2" "subtype2" "subtype1"
[235] "subtype3" "subtype3" "subtype2" "subtype3" "subtype1" "subtype2"
[241] "subtype2" "subtype3" "subtype2" "subtype2" "subtype3" "subtype1"
[247] "subtype3" "subtype3" "subtype3" "subtype2" "subtype3" "subtype2"
[253] "subtype3" "subtype2" "subtype1" "subtype1" "subtype1" "subtype3"
[259] "subtype1" "subtype1" "subtype1" "subtype1" "subtype1" "subtype1"
[265] "subtype1" "subtype1"
D5V2, continuous
D5V3, multiclass
D5V4, binary
[1] "tbl2"
          cls
clus       [,1] [,2]
  subtype1   44   52
  subtype2   22   60
  subtype3   33   55
     clus
vv    subtype1 subtype2 subtype3
  NO        44       22       33
  YES       52       60       55
D5V5, binary
[1] "tbl2"
          cls
clus       [,1] [,2]
  subtype1   49   47
  subtype2   67   15
  subtype3   67   21
     clus
vv    subtype1 subtype2 subtype3
  NO        47       15       21
  YES       49       67       67

Clustering(6) Variable = MIRSEQ_CNMF
D6V1, survival
  [1] "subtype1" "subtype1" "subtype1" "subtype1" "subtype2" "subtype1"
  [7] "subtype2" "subtype2" "subtype2" "subtype1" "subtype3" "subtype2"
 [13] "subtype2" "subtype3" "subtype2" "subtype1" "subtype3" "subtype3"
 [19] "subtype3" "subtype3" "subtype1" "subtype3" "subtype2" "subtype2"
 [25] "subtype2" "subtype2" "subtype2" "subtype3" "subtype1" "subtype1"
 [31] "subtype2" "subtype2" "subtype1" "subtype3" "subtype3" "subtype1"
 [37] "subtype3" "subtype1" "subtype2" "subtype3" "subtype1" "subtype1"
 [43] "subtype1" "subtype3" "subtype1" "subtype3" "subtype3" "subtype1"
 [49] "subtype2" "subtype3" "subtype1" "subtype3" "subtype2" "subtype3"
 [55] "subtype2" "subtype3" "subtype3" "subtype1" "subtype2" "subtype3"
 [61] "subtype3" "subtype2" "subtype1" "subtype3" "subtype1" "subtype3"
 [67] "subtype3" "subtype1" "subtype1" "subtype3" "subtype2" "subtype2"
 [73] "subtype3" "subtype2" "subtype2" "subtype3" "subtype3" "subtype3"
 [79] "subtype3" "subtype1" "subtype3" "subtype1" "subtype2" "subtype3"
 [85] "subtype2" "subtype3" "subtype1" "subtype1" "subtype3" "subtype3"
 [91] "subtype3" "subtype3" "subtype1" "subtype1" "subtype1" "subtype2"
 [97] "subtype1" "subtype1" "subtype2" "subtype1" "subtype3" "subtype2"
[103] "subtype3" "subtype3" "subtype1" "subtype1" "subtype1" "subtype1"
[109] "subtype1" "subtype3" "subtype3" "subtype1" "subtype1" "subtype1"
[115] "subtype2" "subtype1" "subtype1" "subtype1" "subtype1" "subtype2"
[121] "subtype2" "subtype3" "subtype3" "subtype2" "subtype3" "subtype3"
[127] "subtype3" "subtype2" "subtype2" "subtype1" "subtype3" "subtype3"
[133] "subtype3" "subtype1" "subtype1" "subtype2" "subtype3" "subtype3"
[139] "subtype2" "subtype1" "subtype1" "subtype2" "subtype1" "subtype2"
[145] "subtype2" "subtype2" "subtype2" "subtype2" "subtype2" "subtype2"
[151] "subtype1" "subtype3" "subtype2" "subtype3" "subtype2" "subtype3"
[157] "subtype2" "subtype1" "subtype1" "subtype2" "subtype1" "subtype1"
[163] "subtype1" "subtype3" "subtype1" "subtype3" "subtype1" "subtype2"
[169] "subtype2" "subtype3" "subtype1" "subtype1" "subtype2" "subtype2"
[175] "subtype2" "subtype2" "subtype2" "subtype1" "subtype2" "subtype3"
[181] "subtype3" "subtype3" "subtype3" "subtype1" "subtype3" "subtype3"
[187] "subtype3" "subtype2" "subtype2" "subtype2" "subtype2" "subtype2"
[193] "subtype3" "subtype2" "subtype1" "subtype3" "subtype2" "subtype2"
[199] "subtype2" "subtype3" "subtype1" "subtype3" "subtype1" "subtype2"
[205] "subtype2" "subtype1" "subtype1" "subtype2" "subtype1" "subtype3"
[211] "subtype1" "subtype2" "subtype2" "subtype1" "subtype3" "subtype3"
[217] "subtype1" "subtype3" "subtype3" "subtype3" "subtype1" "subtype2"
[223] "subtype1" "subtype3" "subtype1" "subtype2" "subtype3" "subtype1"
[229] "subtype3" "subtype2" "subtype3" "subtype1" "subtype3" "subtype3"
[235] "subtype3" "subtype2" "subtype1" "subtype2" "subtype2" "subtype1"
[241] "subtype2" "subtype2" "subtype1" "subtype2" "subtype3" "subtype2"
[247] "subtype1" "subtype2" "subtype1" "subtype3" "subtype1" "subtype2"
[253] "subtype2" "subtype1" "subtype2" "subtype1" "subtype1" "subtype2"
[259] "subtype2" "subtype2" "subtype2" "subtype2" "subtype1" "subtype1"
[265] "subtype1" "subtype1" "subtype2" "subtype2" "subtype3" "subtype1"
[271] "subtype1" "subtype2" "subtype1" "subtype2" "subtype2" "subtype2"
[277] "subtype3" "subtype1" "subtype2" "subtype2" "subtype1" "subtype2"
[283] "subtype2" "subtype1" "subtype3" "subtype2" "subtype3" "subtype2"
[289] "subtype2" "subtype3" "subtype2" "subtype2" "subtype2" "subtype2"
[295] "subtype1" "subtype1" "subtype1" "subtype3" "subtype2" "subtype2"
[301] "subtype2" "subtype2" "subtype1" "subtype1" "subtype2" "subtype1"
[307] "subtype1" "subtype3" "subtype1" "subtype2" "subtype3" "subtype1"
[313] "subtype1" "subtype3" "subtype1" "subtype3" "subtype1" "subtype2"
[319] "subtype1" "subtype2" "subtype1" "subtype3" "subtype1" "subtype2"
[325] "subtype1" "subtype3" "subtype1" "subtype3" "subtype2" "subtype2"
[331] "subtype2" "subtype1" "subtype1" "subtype2" "subtype3" "subtype1"
[337] "subtype1" "subtype1" "subtype1" "subtype3" "subtype1" "subtype1"
[343] "subtype1" "subtype1" "subtype2" "subtype2" "subtype2" "subtype1"
[349] "subtype1" "subtype1" "subtype1" "subtype1" "subtype1" "subtype1"
[355] "subtype1" "subtype1" "subtype1" "subtype1" "subtype1" "subtype1"
[361] "subtype1" "subtype2" "subtype1" "subtype1"
  [1] "subtype1" "subtype1" "subtype1" "subtype1" "subtype2" "subtype1"
  [7] "subtype2" "subtype2" "subtype2" "subtype1" "subtype3" "subtype2"
 [13] "subtype2" "subtype3" "subtype2" "subtype1" "subtype3" "subtype3"
 [19] "subtype3" "subtype3" "subtype1" "subtype3" "subtype2" "subtype2"
 [25] "subtype2" "subtype2" "subtype2" "subtype3" "subtype1" "subtype1"
 [31] "subtype2" "subtype2" "subtype1" "subtype3" "subtype3" "subtype1"
 [37] "subtype3" "subtype1" "subtype2" "subtype3" "subtype1" "subtype1"
 [43] "subtype1" "subtype3" "subtype1" "subtype3" "subtype3" "subtype1"
 [49] "subtype2" "subtype3" "subtype1" "subtype3" "subtype2" "subtype3"
 [55] "subtype2" "subtype3" "subtype3" "subtype1" "subtype2" "subtype3"
 [61] "subtype3" "subtype2" "subtype1" "subtype3" "subtype1" "subtype3"
 [67] "subtype3" "subtype1" "subtype1" "subtype3" "subtype2" "subtype2"
 [73] "subtype3" "subtype2" "subtype2" "subtype3" "subtype3" "subtype3"
 [79] "subtype3" "subtype1" "subtype3" "subtype1" "subtype2" "subtype3"
 [85] "subtype2" "subtype3" "subtype1" "subtype1" "subtype3" "subtype3"
 [91] "subtype3" "subtype3" "subtype1" "subtype1" "subtype1" "subtype2"
 [97] "subtype1" "subtype1" "subtype2" "subtype1" "subtype3" "subtype2"
[103] "subtype3" "subtype3" "subtype1" "subtype1" "subtype1" "subtype1"
[109] "subtype1" "subtype3" "subtype3" "subtype1" "subtype1" "subtype1"
[115] "subtype2" "subtype1" "subtype1" "subtype1" "subtype1" "subtype2"
[121] "subtype2" "subtype3" "subtype3" "subtype2" "subtype3" "subtype3"
[127] "subtype3" "subtype2" "subtype2" "subtype1" "subtype3" "subtype3"
[133] "subtype3" "subtype1" "subtype1" "subtype2" "subtype3" "subtype3"
[139] "subtype2" "subtype1" "subtype1" "subtype2" "subtype1" "subtype2"
[145] "subtype2" "subtype2" "subtype2" "subtype2" "subtype2" "subtype2"
[151] "subtype1" "subtype3" "subtype2" "subtype3" "subtype2" "subtype3"
[157] "subtype2" "subtype1" "subtype1" "subtype2" "subtype1" "subtype1"
[163] "subtype1" "subtype3" "subtype1" "subtype3" "subtype1" "subtype2"
[169] "subtype2" "subtype3" "subtype1" "subtype1" "subtype2" "subtype2"
[175] "subtype2" "subtype2" "subtype2" "subtype1" "subtype2" "subtype3"
[181] "subtype3" "subtype3" "subtype3" "subtype1" "subtype3" "subtype3"
[187] "subtype3" "subtype2" "subtype2" "subtype2" "subtype2" "subtype2"
[193] "subtype3" "subtype2" "subtype1" "subtype3" "subtype2" "subtype2"
[199] "subtype2" "subtype3" "subtype1" "subtype3" "subtype1" "subtype2"
[205] "subtype2" "subtype1" "subtype1" "subtype2" "subtype1" "subtype3"
[211] "subtype1" "subtype2" "subtype2" "subtype1" "subtype3" "subtype3"
[217] "subtype1" "subtype3" "subtype3" "subtype3" "subtype1" "subtype2"
[223] "subtype1" "subtype3" "subtype1" "subtype2" "subtype3" "subtype1"
[229] "subtype3" "subtype2" "subtype3" "subtype1" "subtype3" "subtype3"
[235] "subtype3" "subtype2" "subtype1" "subtype2" "subtype2" "subtype1"
[241] "subtype2" "subtype2" "subtype1" "subtype2" "subtype3" "subtype2"
[247] "subtype1" "subtype2" "subtype1" "subtype3" "subtype1" "subtype2"
[253] "subtype2" "subtype1" "subtype2" "subtype1" "subtype1" "subtype2"
[259] "subtype2" "subtype2" "subtype2" "subtype2" "subtype1" "subtype1"
[265] "subtype1" "subtype1" "subtype2" "subtype2" "subtype3" "subtype1"
[271] "subtype1" "subtype2" "subtype1" "subtype2" "subtype2" "subtype2"
[277] "subtype3" "subtype1" "subtype2" "subtype2" "subtype1" "subtype2"
[283] "subtype2" "subtype1" "subtype3" "subtype2" "subtype3" "subtype2"
[289] "subtype2" "subtype3" "subtype2" "subtype2" "subtype2" "subtype2"
[295] "subtype1" "subtype1" "subtype1" "subtype3" "subtype2" "subtype2"
[301] "subtype2" "subtype2" "subtype1" "subtype1" "subtype2" "subtype1"
[307] "subtype1" "subtype3" "subtype1" "subtype2" "subtype3" "subtype1"
[313] "subtype1" "subtype3" "subtype1" "subtype3" "subtype1" "subtype2"
[319] "subtype1" "subtype2" "subtype1" "subtype3" "subtype1" "subtype2"
[325] "subtype1" "subtype3" "subtype1" "subtype3" "subtype2" "subtype2"
[331] "subtype2" "subtype1" "subtype1" "subtype2" "subtype3" "subtype1"
[337] "subtype1" "subtype1" "subtype1" "subtype3" "subtype1" "subtype1"
[343] "subtype1" "subtype1" "subtype2" "subtype2" "subtype2" "subtype1"
[349] "subtype1" "subtype1" "subtype1" "subtype1" "subtype1" "subtype1"
[355] "subtype1" "subtype1" "subtype1" "subtype1" "subtype1" "subtype1"
[361] "subtype1" "subtype2" "subtype1" "subtype1"
  [1] "subtype1" "subtype1" "subtype1" "subtype1" "subtype2" "subtype1"
  [7] "subtype2" "subtype2" "subtype2" "subtype1" "subtype3" "subtype2"
 [13] "subtype2" "subtype3" "subtype2" "subtype1" "subtype3" "subtype3"
 [19] "subtype3" "subtype3" "subtype1" "subtype3" "subtype2" "subtype2"
 [25] "subtype2" "subtype2" "subtype2" "subtype3" "subtype1" "subtype1"
 [31] "subtype2" "subtype2" "subtype1" "subtype3" "subtype3" "subtype1"
 [37] "subtype3" "subtype1" "subtype2" "subtype3" "subtype1" "subtype1"
 [43] "subtype1" "subtype3" "subtype1" "subtype3" "subtype3" "subtype1"
 [49] "subtype2" "subtype3" "subtype1" "subtype3" "subtype2" "subtype3"
 [55] "subtype2" "subtype3" "subtype3" "subtype1" "subtype2" "subtype3"
 [61] "subtype3" "subtype2" "subtype1" "subtype3" "subtype1" "subtype3"
 [67] "subtype3" "subtype1" "subtype1" "subtype3" "subtype2" "subtype2"
 [73] "subtype3" "subtype2" "subtype2" "subtype3" "subtype3" "subtype3"
 [79] "subtype3" "subtype1" "subtype3" "subtype1" "subtype2" "subtype3"
 [85] "subtype2" "subtype3" "subtype1" "subtype1" "subtype3" "subtype3"
 [91] "subtype3" "subtype3" "subtype1" "subtype1" "subtype1" "subtype2"
 [97] "subtype1" "subtype1" "subtype2" "subtype1" "subtype3" "subtype2"
[103] "subtype3" "subtype3" "subtype1" "subtype1" "subtype1" "subtype1"
[109] "subtype1" "subtype3" "subtype3" "subtype1" "subtype1" "subtype1"
[115] "subtype2" "subtype1" "subtype1" "subtype1" "subtype1" "subtype2"
[121] "subtype2" "subtype3" "subtype3" "subtype2" "subtype3" "subtype3"
[127] "subtype3" "subtype2" "subtype2" "subtype1" "subtype3" "subtype3"
[133] "subtype3" "subtype1" "subtype1" "subtype2" "subtype3" "subtype3"
[139] "subtype2" "subtype1" "subtype1" "subtype2" "subtype1" "subtype2"
[145] "subtype2" "subtype2" "subtype2" "subtype2" "subtype2" "subtype2"
[151] "subtype1" "subtype3" "subtype2" "subtype3" "subtype2" "subtype3"
[157] "subtype2" "subtype1" "subtype1" "subtype2" "subtype1" "subtype1"
[163] "subtype1" "subtype3" "subtype1" "subtype3" "subtype1" "subtype2"
[169] "subtype2" "subtype3" "subtype1" "subtype1" "subtype2" "subtype2"
[175] "subtype2" "subtype2" "subtype2" "subtype1" "subtype2" "subtype3"
[181] "subtype3" "subtype3" "subtype3" "subtype1" "subtype3" "subtype3"
[187] "subtype3" "subtype2" "subtype2" "subtype2" "subtype2" "subtype2"
[193] "subtype3" "subtype2" "subtype1" "subtype3" "subtype2" "subtype2"
[199] "subtype2" "subtype3" "subtype1" "subtype3" "subtype1" "subtype2"
[205] "subtype2" "subtype1" "subtype1" "subtype2" "subtype1" "subtype3"
[211] "subtype1" "subtype2" "subtype2" "subtype1" "subtype3" "subtype3"
[217] "subtype1" "subtype3" "subtype3" "subtype3" "subtype1" "subtype2"
[223] "subtype1" "subtype3" "subtype1" "subtype2" "subtype3" "subtype1"
[229] "subtype3" "subtype2" "subtype3" "subtype1" "subtype3" "subtype3"
[235] "subtype3" "subtype2" "subtype1" "subtype2" "subtype2" "subtype1"
[241] "subtype2" "subtype2" "subtype1" "subtype2" "subtype3" "subtype2"
[247] "subtype1" "subtype2" "subtype1" "subtype3" "subtype1" "subtype2"
[253] "subtype2" "subtype1" "subtype2" "subtype1" "subtype1" "subtype2"
[259] "subtype2" "subtype2" "subtype2" "subtype2" "subtype1" "subtype1"
[265] "subtype1" "subtype1" "subtype2" "subtype2" "subtype3" "subtype1"
[271] "subtype1" "subtype2" "subtype1" "subtype2" "subtype2" "subtype2"
[277] "subtype3" "subtype1" "subtype2" "subtype2" "subtype1" "subtype2"
[283] "subtype2" "subtype1" "subtype3" "subtype2" "subtype3" "subtype2"
[289] "subtype2" "subtype3" "subtype2" "subtype2" "subtype2" "subtype2"
[295] "subtype1" "subtype1" "subtype1" "subtype3" "subtype2" "subtype2"
[301] "subtype2" "subtype2" "subtype1" "subtype1" "subtype2" "subtype1"
[307] "subtype1" "subtype3" "subtype1" "subtype2" "subtype3" "subtype1"
[313] "subtype1" "subtype3" "subtype1" "subtype3" "subtype1" "subtype2"
[319] "subtype1" "subtype2" "subtype1" "subtype3" "subtype1" "subtype2"
[325] "subtype1" "subtype3" "subtype1" "subtype3" "subtype2" "subtype2"
[331] "subtype2" "subtype1" "subtype1" "subtype2" "subtype3" "subtype1"
[337] "subtype1" "subtype1" "subtype1" "subtype3" "subtype1" "subtype1"
[343] "subtype1" "subtype1" "subtype2" "subtype2" "subtype2" "subtype1"
[349] "subtype1" "subtype1" "subtype1" "subtype1" "subtype1" "subtype1"
[355] "subtype1" "subtype1" "subtype1" "subtype1" "subtype1" "subtype1"
[361] "subtype1" "subtype2" "subtype1" "subtype1"
D6V2, continuous
D6V3, multiclass
D6V4, binary
[1] "tbl2"
          cls
clus       [,1] [,2]
  subtype1   55   86
  subtype2   34   91
  subtype3   32   68
     clus
vv    subtype1 subtype2 subtype3
  NO        55       34       32
  YES       86       91       68
D6V5, binary
[1] "tbl2"
          cls
clus       [,1] [,2]
  subtype1   92   49
  subtype2  102   23
  subtype3   78   22
     clus
vv    subtype1 subtype2 subtype3
  NO        49       23       22
  YES       92      102       78

Clustering(7) Variable = MIRSEQ_CHIERARCHICAL
D7V1, survival
  [1] "subtype2" "subtype2" "subtype2" "subtype2" "subtype1" "subtype2"
  [7] "subtype1" "subtype1" "subtype1" "subtype2" "subtype3" "subtype3"
 [13] "subtype3" "subtype3" "subtype1" "subtype2" "subtype3" "subtype3"
 [19] "subtype2" "subtype3" "subtype1" "subtype3" "subtype1" "subtype3"
 [25] "subtype1" "subtype1" "subtype2" "subtype2" "subtype2" "subtype2"
 [31] "subtype1" "subtype1" "subtype2" "subtype2" "subtype2" "subtype2"
 [37] "subtype3" "subtype2" "subtype1" "subtype3" "subtype2" "subtype2"
 [43] "subtype2" "subtype2" "subtype2" "subtype2" "subtype2" "subtype2"
 [49] "subtype3" "subtype3" "subtype2" "subtype3" "subtype1" "subtype1"
 [55] "subtype2" "subtype2" "subtype3" "subtype2" "subtype2" "subtype2"
 [61] "subtype2" "subtype1" "subtype2" "subtype2" "subtype2" "subtype2"
 [67] "subtype1" "subtype2" "subtype2" "subtype2" "subtype3" "subtype3"
 [73] "subtype3" "subtype1" "subtype1" "subtype3" "subtype2" "subtype3"
 [79] "subtype2" "subtype2" "subtype1" "subtype2" "subtype1" "subtype1"
 [85] "subtype1" "subtype3" "subtype2" "subtype2" "subtype2" "subtype2"
 [91] "subtype2" "subtype3" "subtype2" "subtype2" "subtype2" "subtype1"
 [97] "subtype2" "subtype2" "subtype1" "subtype2" "subtype2" "subtype1"
[103] "subtype3" "subtype3" "subtype2" "subtype2" "subtype2" "subtype2"
[109] "subtype2" "subtype2" "subtype2" "subtype2" "subtype2" "subtype2"
[115] "subtype1" "subtype2" "subtype2" "subtype2" "subtype2" "subtype1"
[121] "subtype1" "subtype3" "subtype1" "subtype1" "subtype3" "subtype2"
[127] "subtype3" "subtype1" "subtype1" "subtype2" "subtype2" "subtype3"
[133] "subtype3" "subtype2" "subtype2" "subtype1" "subtype2" "subtype3"
[139] "subtype1" "subtype2" "subtype2" "subtype1" "subtype2" "subtype1"
[145] "subtype2" "subtype1" "subtype2" "subtype2" "subtype1" "subtype1"
[151] "subtype3" "subtype3" "subtype1" "subtype3" "subtype1" "subtype3"
[157] "subtype1" "subtype2" "subtype2" "subtype1" "subtype2" "subtype2"
[163] "subtype2" "subtype1" "subtype2" "subtype3" "subtype2" "subtype1"
[169] "subtype1" "subtype3" "subtype2" "subtype2" "subtype1" "subtype3"
[175] "subtype1" "subtype3" "subtype1" "subtype1" "subtype1" "subtype3"
[181] "subtype3" "subtype2" "subtype3" "subtype1" "subtype3" "subtype1"
[187] "subtype3" "subtype1" "subtype1" "subtype3" "subtype1" "subtype1"
[193] "subtype3" "subtype1" "subtype2" "subtype3" "subtype1" "subtype1"
[199] "subtype1" "subtype3" "subtype2" "subtype2" "subtype2" "subtype1"
[205] "subtype1" "subtype2" "subtype2" "subtype1" "subtype2" "subtype3"
[211] "subtype1" "subtype1" "subtype1" "subtype2" "subtype3" "subtype3"
[217] "subtype2" "subtype1" "subtype2" "subtype3" "subtype2" "subtype1"
[223] "subtype2" "subtype3" "subtype2" "subtype1" "subtype3" "subtype2"
[229] "subtype2" "subtype1" "subtype3" "subtype2" "subtype3" "subtype3"
[235] "subtype3" "subtype1" "subtype2" "subtype2" "subtype1" "subtype2"
[241] "subtype3" "subtype1" "subtype2" "subtype2" "subtype3" "subtype3"
[247] "subtype2" "subtype1" "subtype2" "subtype3" "subtype2" "subtype1"
[253] "subtype1" "subtype2" "subtype1" "subtype2" "subtype2" "subtype1"
[259] "subtype3" "subtype1" "subtype1" "subtype1" "subtype2" "subtype2"
[265] "subtype2" "subtype2" "subtype1" "subtype3" "subtype3" "subtype2"
[271] "subtype2" "subtype1" "subtype2" "subtype1" "subtype2" "subtype1"
[277] "subtype2" "subtype2" "subtype1" "subtype1" "subtype2" "subtype1"
[283] "subtype1" "subtype2" "subtype2" "subtype1" "subtype3" "subtype3"
[289] "subtype1" "subtype3" "subtype1" "subtype3" "subtype1" "subtype1"
[295] "subtype2" "subtype2" "subtype1" "subtype2" "subtype1" "subtype1"
[301] "subtype1" "subtype1" "subtype3" "subtype2" "subtype1" "subtype2"
[307] "subtype2" "subtype3" "subtype2" "subtype3" "subtype3" "subtype2"
[313] "subtype2" "subtype2" "subtype2" "subtype2" "subtype2" "subtype1"
[319] "subtype2" "subtype1" "subtype2" "subtype3" "subtype2" "subtype1"
[325] "subtype2" "subtype3" "subtype2" "subtype3" "subtype1" "subtype1"
[331] "subtype1" "subtype2" "subtype2" "subtype1" "subtype3" "subtype2"
[337] "subtype2" "subtype2" "subtype2" "subtype3" "subtype2" "subtype2"
[343] "subtype2" "subtype2" "subtype1" "subtype1" "subtype1" "subtype2"
[349] "subtype2" "subtype2" "subtype2" "subtype2" "subtype2" "subtype2"
[355] "subtype2" "subtype2" "subtype2" "subtype2" "subtype2" "subtype2"
[361] "subtype2" "subtype1" "subtype2" "subtype2"
  [1] "subtype2" "subtype2" "subtype2" "subtype2" "subtype1" "subtype2"
  [7] "subtype1" "subtype1" "subtype1" "subtype2" "subtype3" "subtype3"
 [13] "subtype3" "subtype3" "subtype1" "subtype2" "subtype3" "subtype3"
 [19] "subtype2" "subtype3" "subtype1" "subtype3" "subtype1" "subtype3"
 [25] "subtype1" "subtype1" "subtype2" "subtype2" "subtype2" "subtype2"
 [31] "subtype1" "subtype1" "subtype2" "subtype2" "subtype2" "subtype2"
 [37] "subtype3" "subtype2" "subtype1" "subtype3" "subtype2" "subtype2"
 [43] "subtype2" "subtype2" "subtype2" "subtype2" "subtype2" "subtype2"
 [49] "subtype3" "subtype3" "subtype2" "subtype3" "subtype1" "subtype1"
 [55] "subtype2" "subtype2" "subtype3" "subtype2" "subtype2" "subtype2"
 [61] "subtype2" "subtype1" "subtype2" "subtype2" "subtype2" "subtype2"
 [67] "subtype1" "subtype2" "subtype2" "subtype2" "subtype3" "subtype3"
 [73] "subtype3" "subtype1" "subtype1" "subtype3" "subtype2" "subtype3"
 [79] "subtype2" "subtype2" "subtype1" "subtype2" "subtype1" "subtype1"
 [85] "subtype1" "subtype3" "subtype2" "subtype2" "subtype2" "subtype2"
 [91] "subtype2" "subtype3" "subtype2" "subtype2" "subtype2" "subtype1"
 [97] "subtype2" "subtype2" "subtype1" "subtype2" "subtype2" "subtype1"
[103] "subtype3" "subtype3" "subtype2" "subtype2" "subtype2" "subtype2"
[109] "subtype2" "subtype2" "subtype2" "subtype2" "subtype2" "subtype2"
[115] "subtype1" "subtype2" "subtype2" "subtype2" "subtype2" "subtype1"
[121] "subtype1" "subtype3" "subtype1" "subtype1" "subtype3" "subtype2"
[127] "subtype3" "subtype1" "subtype1" "subtype2" "subtype2" "subtype3"
[133] "subtype3" "subtype2" "subtype2" "subtype1" "subtype2" "subtype3"
[139] "subtype1" "subtype2" "subtype2" "subtype1" "subtype2" "subtype1"
[145] "subtype2" "subtype1" "subtype2" "subtype2" "subtype1" "subtype1"
[151] "subtype3" "subtype3" "subtype1" "subtype3" "subtype1" "subtype3"
[157] "subtype1" "subtype2" "subtype2" "subtype1" "subtype2" "subtype2"
[163] "subtype2" "subtype1" "subtype2" "subtype3" "subtype2" "subtype1"
[169] "subtype1" "subtype3" "subtype2" "subtype2" "subtype1" "subtype3"
[175] "subtype1" "subtype3" "subtype1" "subtype1" "subtype1" "subtype3"
[181] "subtype3" "subtype2" "subtype3" "subtype1" "subtype3" "subtype1"
[187] "subtype3" "subtype1" "subtype1" "subtype3" "subtype1" "subtype1"
[193] "subtype3" "subtype1" "subtype2" "subtype3" "subtype1" "subtype1"
[199] "subtype1" "subtype3" "subtype2" "subtype2" "subtype2" "subtype1"
[205] "subtype1" "subtype2" "subtype2" "subtype1" "subtype2" "subtype3"
[211] "subtype1" "subtype1" "subtype1" "subtype2" "subtype3" "subtype3"
[217] "subtype2" "subtype1" "subtype2" "subtype3" "subtype2" "subtype1"
[223] "subtype2" "subtype3" "subtype2" "subtype1" "subtype3" "subtype2"
[229] "subtype2" "subtype1" "subtype3" "subtype2" "subtype3" "subtype3"
[235] "subtype3" "subtype1" "subtype2" "subtype2" "subtype1" "subtype2"
[241] "subtype3" "subtype1" "subtype2" "subtype2" "subtype3" "subtype3"
[247] "subtype2" "subtype1" "subtype2" "subtype3" "subtype2" "subtype1"
[253] "subtype1" "subtype2" "subtype1" "subtype2" "subtype2" "subtype1"
[259] "subtype3" "subtype1" "subtype1" "subtype1" "subtype2" "subtype2"
[265] "subtype2" "subtype2" "subtype1" "subtype3" "subtype3" "subtype2"
[271] "subtype2" "subtype1" "subtype2" "subtype1" "subtype2" "subtype1"
[277] "subtype2" "subtype2" "subtype1" "subtype1" "subtype2" "subtype1"
[283] "subtype1" "subtype2" "subtype2" "subtype1" "subtype3" "subtype3"
[289] "subtype1" "subtype3" "subtype1" "subtype3" "subtype1" "subtype1"
[295] "subtype2" "subtype2" "subtype1" "subtype2" "subtype1" "subtype1"
[301] "subtype1" "subtype1" "subtype3" "subtype2" "subtype1" "subtype2"
[307] "subtype2" "subtype3" "subtype2" "subtype3" "subtype3" "subtype2"
[313] "subtype2" "subtype2" "subtype2" "subtype2" "subtype2" "subtype1"
[319] "subtype2" "subtype1" "subtype2" "subtype3" "subtype2" "subtype1"
[325] "subtype2" "subtype3" "subtype2" "subtype3" "subtype1" "subtype1"
[331] "subtype1" "subtype2" "subtype2" "subtype1" "subtype3" "subtype2"
[337] "subtype2" "subtype2" "subtype2" "subtype3" "subtype2" "subtype2"
[343] "subtype2" "subtype2" "subtype1" "subtype1" "subtype1" "subtype2"
[349] "subtype2" "subtype2" "subtype2" "subtype2" "subtype2" "subtype2"
[355] "subtype2" "subtype2" "subtype2" "subtype2" "subtype2" "subtype2"
[361] "subtype2" "subtype1" "subtype2" "subtype2"
  [1] "subtype2" "subtype2" "subtype2" "subtype2" "subtype1" "subtype2"
  [7] "subtype1" "subtype1" "subtype1" "subtype2" "subtype3" "subtype3"
 [13] "subtype3" "subtype3" "subtype1" "subtype2" "subtype3" "subtype3"
 [19] "subtype2" "subtype3" "subtype1" "subtype3" "subtype1" "subtype3"
 [25] "subtype1" "subtype1" "subtype2" "subtype2" "subtype2" "subtype2"
 [31] "subtype1" "subtype1" "subtype2" "subtype2" "subtype2" "subtype2"
 [37] "subtype3" "subtype2" "subtype1" "subtype3" "subtype2" "subtype2"
 [43] "subtype2" "subtype2" "subtype2" "subtype2" "subtype2" "subtype2"
 [49] "subtype3" "subtype3" "subtype2" "subtype3" "subtype1" "subtype1"
 [55] "subtype2" "subtype2" "subtype3" "subtype2" "subtype2" "subtype2"
 [61] "subtype2" "subtype1" "subtype2" "subtype2" "subtype2" "subtype2"
 [67] "subtype1" "subtype2" "subtype2" "subtype2" "subtype3" "subtype3"
 [73] "subtype3" "subtype1" "subtype1" "subtype3" "subtype2" "subtype3"
 [79] "subtype2" "subtype2" "subtype1" "subtype2" "subtype1" "subtype1"
 [85] "subtype1" "subtype3" "subtype2" "subtype2" "subtype2" "subtype2"
 [91] "subtype2" "subtype3" "subtype2" "subtype2" "subtype2" "subtype1"
 [97] "subtype2" "subtype2" "subtype1" "subtype2" "subtype2" "subtype1"
[103] "subtype3" "subtype3" "subtype2" "subtype2" "subtype2" "subtype2"
[109] "subtype2" "subtype2" "subtype2" "subtype2" "subtype2" "subtype2"
[115] "subtype1" "subtype2" "subtype2" "subtype2" "subtype2" "subtype1"
[121] "subtype1" "subtype3" "subtype1" "subtype1" "subtype3" "subtype2"
[127] "subtype3" "subtype1" "subtype1" "subtype2" "subtype2" "subtype3"
[133] "subtype3" "subtype2" "subtype2" "subtype1" "subtype2" "subtype3"
[139] "subtype1" "subtype2" "subtype2" "subtype1" "subtype2" "subtype1"
[145] "subtype2" "subtype1" "subtype2" "subtype2" "subtype1" "subtype1"
[151] "subtype3" "subtype3" "subtype1" "subtype3" "subtype1" "subtype3"
[157] "subtype1" "subtype2" "subtype2" "subtype1" "subtype2" "subtype2"
[163] "subtype2" "subtype1" "subtype2" "subtype3" "subtype2" "subtype1"
[169] "subtype1" "subtype3" "subtype2" "subtype2" "subtype1" "subtype3"
[175] "subtype1" "subtype3" "subtype1" "subtype1" "subtype1" "subtype3"
[181] "subtype3" "subtype2" "subtype3" "subtype1" "subtype3" "subtype1"
[187] "subtype3" "subtype1" "subtype1" "subtype3" "subtype1" "subtype1"
[193] "subtype3" "subtype1" "subtype2" "subtype3" "subtype1" "subtype1"
[199] "subtype1" "subtype3" "subtype2" "subtype2" "subtype2" "subtype1"
[205] "subtype1" "subtype2" "subtype2" "subtype1" "subtype2" "subtype3"
[211] "subtype1" "subtype1" "subtype1" "subtype2" "subtype3" "subtype3"
[217] "subtype2" "subtype1" "subtype2" "subtype3" "subtype2" "subtype1"
[223] "subtype2" "subtype3" "subtype2" "subtype1" "subtype3" "subtype2"
[229] "subtype2" "subtype1" "subtype3" "subtype2" "subtype3" "subtype3"
[235] "subtype3" "subtype1" "subtype2" "subtype2" "subtype1" "subtype2"
[241] "subtype3" "subtype1" "subtype2" "subtype2" "subtype3" "subtype3"
[247] "subtype2" "subtype1" "subtype2" "subtype3" "subtype2" "subtype1"
[253] "subtype1" "subtype2" "subtype1" "subtype2" "subtype2" "subtype1"
[259] "subtype3" "subtype1" "subtype1" "subtype1" "subtype2" "subtype2"
[265] "subtype2" "subtype2" "subtype1" "subtype3" "subtype3" "subtype2"
[271] "subtype2" "subtype1" "subtype2" "subtype1" "subtype2" "subtype1"
[277] "subtype2" "subtype2" "subtype1" "subtype1" "subtype2" "subtype1"
[283] "subtype1" "subtype2" "subtype2" "subtype1" "subtype3" "subtype3"
[289] "subtype1" "subtype3" "subtype1" "subtype3" "subtype1" "subtype1"
[295] "subtype2" "subtype2" "subtype1" "subtype2" "subtype1" "subtype1"
[301] "subtype1" "subtype1" "subtype3" "subtype2" "subtype1" "subtype2"
[307] "subtype2" "subtype3" "subtype2" "subtype3" "subtype3" "subtype2"
[313] "subtype2" "subtype2" "subtype2" "subtype2" "subtype2" "subtype1"
[319] "subtype2" "subtype1" "subtype2" "subtype3" "subtype2" "subtype1"
[325] "subtype2" "subtype3" "subtype2" "subtype3" "subtype1" "subtype1"
[331] "subtype1" "subtype2" "subtype2" "subtype1" "subtype3" "subtype2"
[337] "subtype2" "subtype2" "subtype2" "subtype3" "subtype2" "subtype2"
[343] "subtype2" "subtype2" "subtype1" "subtype1" "subtype1" "subtype2"
[349] "subtype2" "subtype2" "subtype2" "subtype2" "subtype2" "subtype2"
[355] "subtype2" "subtype2" "subtype2" "subtype2" "subtype2" "subtype2"
[361] "subtype2" "subtype1" "subtype2" "subtype2"
D7V2, continuous
D7V3, multiclass
D7V4, binary
[1] "tbl2"
          cls
clus       [,1] [,2]
  subtype1   31   81
  subtype2   71  106
  subtype3   19   58
     clus
vv    subtype1 subtype2 subtype3
  NO        31       71       19
  YES       81      106       58
D7V5, binary
[1] "tbl2"
          cls
clus       [,1] [,2]
  subtype1   89   23
  subtype2  120   57
  subtype3   63   14
     clus
vv    subtype1 subtype2 subtype3
  NO        23       57       14
  YES       89      120       63
                                    V1.D 
                         "Time to Death" 
                                      V2 
                                   "AGE" 
                                      V3 
                     "HISTOLOGICAL.TYPE" 
                                      V4 
"RADIATIONS.RADIATION.REGIMENINDICATION" 
                                      V5 
                   "NEOADJUVANT.THERAPY" 
> q(save="no")
