Clinical Features	Time to Death		AGE		GENDER		RADIATIONS.RADIATION.REGIMENINDICATION		NEOADJUVANT.THERAPY	
	nCNV (%)	nWild-Type	logrank test_P	logrank test_Q	t-test_P	t-test_Q	Fisher's exact test_P	Fisher's exact test_Q	Fisher's exact test_P	Fisher's exact test_Q	Fisher's exact test_P	Fisher's exact test_Q
Amp Peak  1(1p22.3)	134 (16%)	686	0.70283	1	0.79516	1	0.64604	1	0.82413	1	0.55564	1
Amp Peak  2(1q21.3)	529 (65%)	291	0.40993	1	0.27435	1	0.72795	1	0.069802	1	0.64943	1
Amp Peak  3(1q32.1)	554 (68%)	266	0.056865	1	0.49549	1	0.28481	1	0.25131	1	0.93811	1
Amp Peak  4(3p25.1)	103 (13%)	717	0.009659	1	0.33207	1	0.61183	1	1	1	0.38196	1
Amp Peak  5(3q26.32)	195 (24%)	625	0.49774	1	0.31089	1	0.69418	1	0.38334	1	0.60862	1
Amp Peak  6(4q13.3)	95 (12%)	725	0.030065	1	0.83016	1	1	1	0.60786	1	0.57056	1
Amp Peak  7(6p23)	163 (20%)	657	0.90755	1	0.73682	1	1	1	0.30177	1	0.78489	1
Amp Peak  8(6q21)	110 (13%)	710	0.00094787	0.402	0.63016	1	1	1	0.90404	1	0.74989	1
Amp Peak  9(7p11.2)	173 (21%)	647	0.98765	1	0.1486	1	0.099671	1	0.033607	1	0.040916	1
Amp Peak 10(8p11.23)	264 (32%)	556	0.028999	1	0.005423	1	0.28498	1	0.65931	1	0.81559	1
Amp Peak 11(8p11.23)	256 (31%)	564	0.20784	1	0.0037223	1	0.28689	1	0.5928	1	0.69536	1
Amp Peak 12(8p11.21)	266 (32%)	554	0.89591	1	0.0018941	0.799	0.28481	1	0.010353	1	0.27831	1
Amp Peak 13(8q21.13)	421 (51%)	399	0.55863	1	0.043114	1	0.50683	1	0.11623	1	0.56161	1
Amp Peak 14(8q24.21)	484 (59%)	336	0.18218	1	0.77983	1	0.74415	1	0.61474	1	0.60514	1
Amp Peak 15(10p15.1)	166 (20%)	654	0.25041	1	0.82816	1	0.21688	1	0.53733	1	0.52672	1
Amp Peak 16(10q22.3)	83 (10%)	737	0.069367	1	0.287	1	0.60978	1	1	1	1	1
Amp Peak 17(10q26.13)	64 (8%)	756	0.51663	1	0.54472	1	1	1	0.75838	1	0.34266	1
Amp Peak 18(11p13)	116 (14%)	704	0.54001	1	0.96012	1	0.37107	1	0.23765	1	0.67709	1
Amp Peak 19(11q13.3)	263 (32%)	557	0.15776	1	0.33428	1	0.15512	1	0.65833	1	0.5857	1
Amp Peak 20(11q14.1)	159 (19%)	661	0.062785	1	0.25455	1	0.6884	1	0.60147	1	0.19796	1
Amp Peak 21(12p13.33)	148 (18%)	672	0.73591	1	0.91892	1	1	1	0.16381	1	0.77723	1
Amp Peak 22(12q15)	158 (19%)	662	0.057688	1	0.21183	1	0.0023609	0.987	0.91683	1	0.51884	1
Amp Peak 23(13q12.3)	82 (10%)	738	0.070916	1	0.98165	1	0.22473	1	0.78418	1	0.71826	1
Amp Peak 24(13q34)	93 (11%)	727	0.9294	1	0.54155	1	0.60824	1	0.89707	1	0.64666	1
Amp Peak 25(14q21.1)	128 (16%)	692	0.93323	1	0.39002	1	1	1	0.42676	1	0.10935	1
Amp Peak 26(15q26.3)	109 (13%)	711	0.13066	1	0.072852	1	0.10531	1	1	1	1	1
Amp Peak 27(16q12.1)	106 (13%)	714	0.032623	1	0.012069	1	1	1	0.62229	1	0.82895	1
Amp Peak 28(17p11.2)	80 (10%)	740	0.31796	1	0.002608	1	0.21632	1	0.67827	1	0.39167	1
Amp Peak 29(17q12)	222 (27%)	598	0.66284	1	0.87537	1	0.0021166	0.887	0.30753	1	0.14146	1
Amp Peak 30(17q23.1)	281 (34%)	539	0.63353	1	0.50597	1	0.0011231	0.475	0.22298	1	0.0046565	1
Amp Peak 31(19q12)	124 (15%)	696	0.3118	1	0.78542	1	0.63203	1	0.107	1	0.83932	1
Amp Peak 32(19q13.42)	129 (16%)	691	0.51856	1	0.91713	1	0.15583	1	0.82111	1	0.84178	1
Amp Peak 33(20q13.2)	330 (40%)	490	0.080495	1	0.75319	1	0.49651	1	0.73658	1	0.65707	1
Del Peak  1(1p36.13)	243 (30%)	577	0.086604	1	0.025401	1	0.13471	1	0.17599	1	0.30128	1
Del Peak  2(1p21.2)	181 (22%)	639	0.23389	1	0.00045254	0.193	1	1	0.55186	1	0.38108	1
Del Peak  3(2p25.1)	84 (10%)	736	0.77305	1	0.089737	1	1	1	1	1	0.231	1
Del Peak  4(2q22.3)	106 (13%)	714	0.95771	1	0.62395	1	1	1	0.62229	1	1	1
Del Peak  5(2q36.3)	121 (15%)	699	0.1158	1	0.76519	1	0.37047	1	0.48717	1	0.91869	1
Del Peak  6(2q37.3)	138 (17%)	682	0.23214	1	0.89538	1	1	1	0.82616	1	0.69786	1
Del Peak  7(3p21.31)	207 (25%)	613	0.00749	1	0.0019483	0.82	0.24101	1	0.84966	1	0.67618	1
Del Peak  8(3p13)	185 (23%)	635	0.0064158	1	0.011947	1	0.42978	1	0.16793	1	0.33922	1
Del Peak  9(4p16.3)	172 (21%)	648	0.76454	1	0.24324	1	1	1	0.91921	1	0.10877	1
Del Peak 10(4q35.2)	169 (21%)	651	0.14123	1	0.47955	1	0.69428	1	0.83846	1	0.24256	1
Del Peak 11(5q11.2)	155 (19%)	665	0.12884	1	0.060258	1	0.22092	1	1	1	0.51587	1
Del Peak 12(5q21.3)	149 (18%)	671	0.4396	1	0.16315	1	0.37677	1	0.6683	1	0.15752	1
Del Peak 13(6p25.3)	103 (13%)	717	0.95384	1	0.40269	1	0.31495	1	0.61901	1	0.66225	1
Del Peak 14(6q14.3)	223 (27%)	597	0.54748	1	0.19498	1	0.45714	1	0.57828	1	0.62405	1
Del Peak 15(6q21)	220 (27%)	600	0.60468	1	0.0088312	1	0.70773	1	0.77981	1	0.93473	1
Del Peak 16(6q27)	218 (27%)	602	0.21179	1	0.00028529	0.122	0.45782	1	0.26205	1	0.51048	1
Del Peak 17(7p22.3)	72 (9%)	748	0.83597	1	0.67717	1	1	1	0.38078	1	0.30667	1
Del Peak 18(7q36.1)	118 (14%)	702	0.11433	1	0.53807	1	0.62482	1	0.34641	1	0.47073	1
Del Peak 19(8p23.2)	388 (47%)	432	0.20434	1	0.36662	1	0.32057	1	0.068619	1	0.14609	1
Del Peak 20(8p12)	310 (38%)	510	0.18182	1	0.79927	1	0.49531	1	0.12553	1	0.20248	1
Del Peak 21(8p11.21)	121 (15%)	699	0.03006	1	0.56717	1	0.37047	1	0.062271	1	0.18362	1
Del Peak 22(9p23)	185 (23%)	635	0.00036987	0.158	0.14264	1	0.42978	1	0.23758	1	0.067732	1
Del Peak 23(9p21.3)	217 (26%)	603	0.040575	1	0.2908	1	0.25491	1	0.261	1	0.0029495	1
Del Peak 24(9q21.11)	144 (18%)	676	0.25142	1	0.066575	1	0.19876	1	0.6642	1	0.0041133	1
Del Peak 25(10q23.31)	157 (19%)	663	0.35131	1	0.73029	1	0.21982	1	0.46415	1	0.40688	1
Del Peak 26(10q26.3)	151 (18%)	669	0.0042065	1	0.23617	1	1	1	0.91514	1	0.70763	1
Del Peak 27(11p15.5)	169 (21%)	651	0.0047204	1	0.52494	1	0.40131	1	0.68344	1	0.52935	1
Del Peak 28(11q13.1)	124 (15%)	696	0.32923	1	0.4081	1	0.63203	1	0.73001	1	0.47848	1
Del Peak 29(11q23.3)	344 (42%)	476	0.1557	1	0.74899	1	0.039656	1	0.86739	1	0.9413	1
Del Peak 30(11q25)	315 (38%)	505	0.080184	1	0.86148	1	0.031516	1	0.79921	1	0.65397	1
Del Peak 31(12p13.1)	105 (13%)	715	0.23448	1	0.3511	1	0.32361	1	0.4586	1	0.32773	1
Del Peak 32(12q23.1)	90 (11%)	730	0.92798	1	0.98332	1	0.60811	1	0.50923	1	0.014604	1
Del Peak 33(12q24.32)	101 (12%)	719	0.81659	1	0.61628	1	0.61075	1	0.9003	1	0.12103	1
Del Peak 34(13q12.11)	239 (29%)	581	0.28602	1	0.34432	1	0.72485	1	0.10167	1	0.47184	1
Del Peak 35(13q14.2)	289 (35%)	531	0.18135	1	0.64885	1	0.29138	1	0.54541	1	0.9394	1
Del Peak 36(14q24.3)	182 (22%)	638	0.041945	1	0.61979	1	0.42395	1	0.6913	1	0.25621	1
Del Peak 37(15q11.2)	197 (24%)	623	0.61588	1	0.83552	1	0.12401	1	1	1	0.30848	1
Del Peak 38(15q21.1)	192 (23%)	628	0.20594	1	0.59646	1	0.69339	1	1	1	0.73161	1
Del Peak 39(16q11.2)	355 (43%)	465	0.27122	1	0.00055598	0.236	1	1	0.35988	1	0.7138	1
Del Peak 40(16q23.1)	431 (53%)	389	0.079766	1	6.5696e-05	0.0282	1	1	0.32093	1	0.56033	1
Del Peak 41(16q24.3)	433 (53%)	387	0.23193	1	2.8314e-05	0.0122	0.51164	1	0.36285	1	0.61061	1
Del Peak 42(17p13.3)	380 (46%)	440	0.2758	1	0.0065409	1	0.74011	1	0.082762	1	0.14522	1
Del Peak 43(17p12)	407 (50%)	413	0.25065	1	0.044931	1	0.10516	1	0.082747	1	0.21642	1
Del Peak 44(17p11.2)	289 (35%)	531	0.32921	1	0.0039156	1	0.29138	1	0.22632	1	0.44692	1
Del Peak 45(17q12)	210 (26%)	610	0.5971	1	0.0087875	1	0.46061	1	0.15557	1	0.4539	1
Del Peak 46(17q21.31)	219 (27%)	601	0.44664	1	0.016768	1	0.45762	1	0.30434	1	0.32566	1
Del Peak 47(18q23)	201 (25%)	619	0.044321	1	0.081663	1	0.46404	1	1	1	0.8658	1
Del Peak 48(19p13.3)	185 (23%)	635	0.92427	1	0.31037	1	0.69232	1	0.62124	1	0.25861	1
Del Peak 49(19q13.32)	79 (10%)	741	0.34828	1	0.32431	1	1	1	0.78023	1	0.62235	1
Del Peak 50(20p13)	89 (11%)	731	0.0020785	0.873	0.2699	1	1	1	0.50946	1	0.061786	1
Del Peak 51(21q11.2)	109 (13%)	711	0.87239	1	0.29592	1	0.61605	1	1	1	0.031826	1
Del Peak 52(22q11.1)	259 (32%)	561	0.059556	1	0.70638	1	0.72706	1	0.062259	1	0.58503	1
Del Peak 53(22q13.31)	286 (35%)	534	0.35818	1	0.39781	1	0.28966	1	0.3861	1	0.36047	1