Clinical Features	Time to Death		AGE		PRIMARY.SITE.OF.DISEASE		GENDER		HISTOLOGICAL.TYPE		PATHOLOGY.T		PATHOLOGY.N		PATHOLOGICSPREAD(M)		RADIATIONS.RADIATION.REGIMENINDICATION		NEOADJUVANT.THERAPY	
	nCNV (%)	nWild-Type	logrank test_P	logrank test_Q	t-test_P	t-test_Q	Fisher's exact test_P	Fisher's exact test_Q	Fisher's exact test_P	Fisher's exact test_Q	Fisher's exact test_P	Fisher's exact test_Q	Fisher's exact test_P	Fisher's exact test_Q	Fisher's exact test_P	Fisher's exact test_Q	Chi-square test_P	Chi-square test_Q	Fisher's exact test_P	Fisher's exact test_Q	Fisher's exact test_P	Fisher's exact test_Q
Amp Peak  1(1q21.3)	100 (17%)	474	0.89712	1	0.68179	1	0.10655	1	0.061828	1	0.19453	1	0.3171	1	0.22941	1	0.37668	1	0.65971	1	0.875	1
Amp Peak  2(2q33.1)	76 (13%)	498	0.93264	1	0.63557	1	0.12919	1	0.10937	1	0.014325	1	0.9091	1	0.0404	1	0.9334	1	1	1	0.29042	1
Amp Peak  3(4q28.3)	19 (3%)	555	0.34146	1	0.35049	1	0.19067	1	0.2433	1	0.23848	1	0.21689	1	0.76842	1	0.096246	1	0.26297	1	1	1
Amp Peak  4(5p13.2)	84 (15%)	490	0.18065	1	0.90958	1	0.35576	1	0.90584	1	0.23424	1	0.40134	1	0.53184	1	0.94795	1	0.62648	1	0.6133	1
Amp Peak  5(6p21.1)	102 (18%)	472	0.34865	1	0.53479	1	0.0068088	1	0.51154	1	0.0017112	1	0.31832	1	0.00030112	0.225	0.12429	1	0.20352	1	0.75513	1
Amp Peak  6(7p11.2)	282 (49%)	292	0.11847	1	0.70881	1	0.26148	1	0.55817	1	0.00010208	0.077	0.79619	1	0.0087695	1	0.047923	1	0.74811	1	0.90532	1
Amp Peak  7(8p11.23)	155 (27%)	419	0.3697	1	0.99283	1	0.91631	1	0.34745	1	0.52367	1	0.35863	1	0.6722	1	0.61595	1	0.7083	1	0.68699	1
Amp Peak  8(8p11.21)	195 (34%)	379	0.7809	1	0.62415	1	0.37476	1	0.13357	1	0.26383	1	0.3761	1	0.4926	1	0.50067	1	0.72496	1	0.90005	1
Amp Peak  9(8q11.23)	239 (42%)	335	0.70213	1	0.23464	1	0.071739	1	0.49785	1	0.017078	1	0.38599	1	0.099936	1	0.20884	1	0.74155	1	0.71686	1
Amp Peak 10(8q24.21)	293 (51%)	281	0.46684	1	0.12804	1	0.075359	1	0.50341	1	0.030194	1	0.45525	1	0.026746	1	0.026181	1	0.74737	1	0.63468	1
Amp Peak 11(9p13.3)	87 (15%)	487	0.40653	1	0.56541	1	7.8222e-05	0.0591	1	1	0.00040512	0.301	0.7927	1	0.68436	1	0.77697	1	1	1	0.31863	1
Amp Peak 12(10q23.1)	25 (4%)	549	0.60335	1	0.054165	1	0.36337	1	0.68284	1	0.50222	1	0.080626	1	0.014763	1	0.53348	1	1	1	0.77044	1
Amp Peak 13(11p15.5)	102 (18%)	472	0.81392	1	0.21703	1	0.0097745	1	0.44566	1	0.00053848	0.397	0.21776	1	0.18622	1	0.12535	1	0.66454	1	0.53248	1
Amp Peak 14(12p13.32)	115 (20%)	459	0.59854	1	0.0070144	1	0.9067	1	1	1	0.59028	1	0.74568	1	0.00879	1	0.27015	1	1	1	0.37183	1
Amp Peak 15(13q12.13)	339 (59%)	235	0.58879	1	0.63644	1	0.0012061	0.877	0.93229	1	5.3415e-10	4.13e-07	0.692	1	0.00057377	0.423	0.035999	1	0.74367	1	0.54717	1
Amp Peak 16(13q12.2)	333 (58%)	241	0.51583	1	0.49851	1	0.0017286	1	0.79929	1	2.1542e-09	1.66e-06	0.62189	1	0.00079632	0.584	0.060733	1	0.74067	1	0.62917	1
Amp Peak 17(13q22.1)	336 (59%)	238	0.25491	1	0.75553	1	0.0080343	1	0.17439	1	1.0518e-07	8.1e-05	0.74486	1	0.00021247	0.159	0.11581	1	0.31799	1	0.5452	1
Amp Peak 18(15q26.1)	25 (4%)	549	0.18701	1	0.73191	1	1	1	0.68284	1	0.79358	1	0.97853	1	0.031186	1	0.41363	1	1	1	0.77044	1
Amp Peak 19(16p11.2)	123 (21%)	451	0.98797	1	0.74821	1	0.81975	1	0.47581	1	0.0050045	1	0.75771	1	0.00042696	0.317	0.33682	1	0.41164	1	0.14498	1
Amp Peak 20(16q12.1)	108 (19%)	466	0.77914	1	0.23775	1	0.47219	1	0.59299	1	0.0056061	1	0.66033	1	0.00066355	0.488	0.44876	1	0.38085	1	0.031469	1
Amp Peak 21(17q12)	99 (17%)	475	0.27096	1	0.39123	1	0.53812	1	0.027116	1	0.015128	1	0.59967	1	0.28639	1	0.04382	1	1	1	0.017542	1
Amp Peak 22(17q24.1)	92 (16%)	482	0.024525	1	0.19676	1	0.70168	1	0.73273	1	0.084642	1	0.687	1	0.72347	1	0.12124	1	1	1	0.0084458	1
Amp Peak 23(19q12)	82 (14%)	492	0.91128	1	0.75047	1	0.10937	1	0.63405	1	0.020947	1	0.93716	1	0.22223	1	0.64173	1	0.3715	1	0.49457	1
Amp Peak 24(19q13.12)	78 (14%)	496	0.13548	1	0.97365	1	0.17274	1	0.90308	1	0.11492	1	0.91145	1	0.58023	1	0.85478	1	0.61743	1	0.30133	1
Amp Peak 25(20p12.1)	213 (37%)	361	0.76357	1	0.17877	1	0.1476	1	0.0094703	1	0.00039313	0.292	0.30478	1	0.33031	1	0.030447	1	0.30288	1	1	1
Amp Peak 26(20p11.23)	257 (45%)	317	0.9324	1	0.32012	1	0.0048716	1	0.077999	1	1.0899e-06	0.000835	0.70942	1	0.077382	1	0.071505	1	0.5231	1	0.15022	1
Amp Peak 27(20p11.21)	294 (51%)	280	0.82049	1	0.6697	1	0.0088764	1	0.078932	1	1.7133e-08	1.32e-05	0.30947	1	0.8227	1	0.102	1	1	1	0.72056	1
Amp Peak 28(20q11.21)	403 (70%)	171	0.84014	1	0.68335	1	2.5725e-05	0.0195	0.36029	1	2.3074e-15	1.8e-12	0.26173	1	0.021678	1	0.13534	1	0.73004	1	0.5157	1
Amp Peak 29(20q13.12)	412 (72%)	162	0.42448	1	0.97205	1	7.5196e-05	0.0569	0.51614	1	1.4435e-13	1.12e-10	0.46548	1	0.0075626	1	0.033304	1	0.71697	1	0.50759	1
Amp Peak 30(20q13.32)	414 (72%)	160	0.40886	1	0.70099	1	0.00015713	0.118	0.64186	1	1.3389e-13	1.04e-10	0.46863	1	0.0052157	1	0.02538	1	0.71434	1	0.5953	1
Del Peak  1(1p36.21)	151 (26%)	423	0.10623	1	0.59121	1	0.042262	1	0.34263	1	0.0038545	1	0.86779	1	0.026365	1	0.0093332	1	1	1	0.13866	1
Del Peak  2(1p36.11)	166 (29%)	408	0.037077	1	0.3509	1	0.3515	1	0.58042	1	0.00025747	0.193	0.28302	1	0.0084825	1	0.0012991	0.942	1	1	0.14879	1
Del Peak  3(1p33)	103 (18%)	471	0.006816	1	0.5611	1	0.54193	1	0.664	1	0.25065	1	0.17269	1	0.046855	1	0.018675	1	1	1	0.16322	1
Del Peak  4(1p13.2)	103 (18%)	471	0.11027	1	0.56736	1	0.71443	1	0.58587	1	0.17212	1	0.14093	1	0.15255	1	0.0022361	1	0.66699	1	0.08713	1
Del Peak  5(1q42.3)	28 (5%)	546	0.96032	1	0.7496	1	0.83165	1	1	1	1	1	0.50499	1	0.14609	1	0.86686	1	1	1	0.40616	1
Del Peak  6(2p21)	21 (4%)	553	0.7669	1	0.83038	1	0.021946	1	0.18274	1	0.06494	1	0.73933	1	0.39273	1	0.79373	1	0.2867	1	0.75363	1
Del Peak  7(2p12)	23 (4%)	551	0.82198	1	0.49944	1	0.0011744	0.856	0.83325	1	0.0097575	1	0.26503	1	0.53843	1	0.78895	1	0.30975	1	1	1
Del Peak  8(2q22.1)	20 (3%)	554	0.7543	1	0.98704	1	1	1	0.36425	1	0.48732	1	0.48126	1	0.70363	1	0.18393	1	1	1	0.7537	1
Del Peak  9(2q37.2)	21 (4%)	553	0.54954	1	0.50369	1	0.80735	1	0.65855	1	0.92714	1	0.32869	1	0.45951	1	0.36803	1	1	1	0.057203	1
Del Peak 10(3p26.3)	58 (10%)	516	0.00038101	0.284	0.30621	1	0.64259	1	0.33122	1	0.044896	1	0.024463	1	0.018367	1	0.00048697	0.36	1	1	1	1
Del Peak 11(3p14.2)	80 (14%)	494	0.2757	1	0.74894	1	1	1	0.63009	1	0.50723	1	0.18213	1	0.29224	1	0.012516	1	1	1	0.30165	1
Del Peak 12(3q26.31)	35 (6%)	539	0.64133	1	0.84257	1	0.43519	1	0.035	1	0.020941	1	0.35678	1	0.51555	1	0.23305	1	1	1	0.20865	1
Del Peak 13(4p16.2)	131 (23%)	443	0.004288	1	0.37917	1	0.09397	1	0.13465	1	0.022523	1	0.90081	1	0.0051692	1	0.017304	1	0.0058087	1	0.032332	1
Del Peak 14(4q22.1)	140 (24%)	434	0.19594	1	0.95912	1	0.0043035	1	0.24361	1	0.00013722	0.103	0.47202	1	0.032745	1	0.34308	1	0.043028	1	0.21073	1
Del Peak 15(4q35.1)	151 (26%)	423	0.69515	1	0.57903	1	0.13443	1	0.84952	1	0.0024063	1	0.86418	1	0.087581	1	0.85647	1	0.012367	1	0.41624	1
Del Peak 16(5q11.2)	95 (17%)	479	0.79093	1	0.73962	1	0.017331	1	0.26141	1	0.017304	1	0.97569	1	0.072521	1	0.2226	1	0.0009796	0.716	0.425	1
Del Peak 17(5q21.1)	112 (20%)	462	0.57066	1	0.94262	1	0.81473	1	0.14061	1	0.61534	1	0.91859	1	0.12675	1	0.2229	1	0.016828	1	0.54857	1
Del Peak 18(5q22.2)	124 (22%)	450	0.53033	1	0.63248	1	0.30831	1	0.084313	1	0.16141	1	0.93438	1	0.41649	1	0.83082	1	0.0043129	1	0.47221	1
Del Peak 19(6p25.3)	47 (8%)	527	0.86214	1	0.16381	1	0.2273	1	0.1695	1	0.14683	1	0.13782	1	0.70897	1	0.61394	1	0.53907	1	0.28361	1
Del Peak 20(6q26)	48 (8%)	526	0.0025345	1	0.67461	1	0.30236	1	0.54655	1	0.061807	1	0.13953	1	0.0023569	1	0.0012258	0.89	0.54694	1	0.5225	1
Del Peak 21(7q31.1)	12 (2%)	562	0.89121	1	0.31324	1	0.74526	1	0.56078	1	0.41683	1	0.68148	1	0.09071	1	0.45212	1	1	1	1	1
Del Peak 22(8p23.2)	244 (43%)	330	0.3968	1	0.65555	1	0.00044382	0.329	0.3098	1	8.3399e-05	0.063	0.20734	1	0.00016912	0.127	0.041331	1	0.50541	1	0.33592	1
Del Peak 23(8p22)	256 (45%)	318	0.24646	1	0.7169	1	0.00099633	0.727	0.61447	1	1.8802e-05	0.0143	0.10618	1	2.4065e-05	0.0183	0.042963	1	0.52149	1	0.47177	1
Del Peak 24(8p11.21)	96 (17%)	478	0.089417	1	0.77058	1	0.25907	1	0.37005	1	0.2542	1	0.91447	1	0.019845	1	0.47919	1	1	1	0.74907	1
Del Peak 25(8p11.21)	49 (9%)	525	0.13972	1	0.21883	1	0.86636	1	0.88143	1	0.64055	1	0.67653	1	0.041296	1	0.072805	1	0.55469	1	0.52277	1
Del Peak 26(10q21.1)	68 (12%)	506	0.44944	1	0.15885	1	0.021353	1	0.89761	1	0.025064	1	0.81452	1	0.41806	1	0.52957	1	1	1	0.71155	1
Del Peak 27(10q23.31)	86 (15%)	488	0.33087	1	0.065455	1	0.005712	1	0.64141	1	0.014355	1	0.21892	1	0.14942	1	0.022715	1	0.62999	1	0.40262	1
Del Peak 28(10q25.2)	81 (14%)	493	0.72202	1	0.16447	1	0.015312	1	0.63114	1	0.025691	1	0.30089	1	0.10042	1	0.36295	1	0.36996	1	0.73202	1
Del Peak 29(11q22.3)	72 (13%)	502	0.90544	1	0.85009	1	0.0015679	1	0.53072	1	0.00097264	0.712	0.52207	1	0.31192	1	0.96756	1	0.091104	1	1	1
Del Peak 30(12p13.1)	47 (8%)	527	0.024401	1	0.66855	1	0.014123	1	0.22442	1	0.0033772	1	0.31045	1	0.024261	1	0.18527	1	0.1634	1	0.28361	1
Del Peak 31(12q21.2)	40 (7%)	534	0.84071	1	0.88938	1	0.27776	1	0.32438	1	0.060922	1	0.49741	1	0.089374	1	0.0011985	0.873	0.48048	1	1	1
Del Peak 32(14q11.2)	149 (26%)	425	0.15052	1	0.46538	1	0.018083	1	0.77504	1	1.4453e-05	0.011	0.6416	1	0.03424	1	0.55624	1	0.7021	1	0.89186	1
Del Peak 33(15q11.2)	178 (31%)	396	0.98628	1	0.48073	1	0.067581	1	0.85665	1	0.0025924	1	0.46813	1	0.048558	1	0.33384	1	0.46917	1	0.52049	1
Del Peak 34(15q21.1)	174 (30%)	400	0.35991	1	0.97293	1	0.0079929	1	0.78484	1	0.0025025	1	0.51325	1	0.12567	1	0.24543	1	0.46468	1	0.60443	1
Del Peak 35(15q22.33)	160 (28%)	414	0.34277	1	0.91249	1	0.00077499	0.57	0.7802	1	0.00017123	0.128	0.044866	1	0.068388	1	0.3195	1	0.27343	1	0.79057	1
Del Peak 36(16p13.3)	43 (7%)	531	0.0061915	1	0.54605	1	0.59651	1	0.87393	1	0.29578	1	0.11905	1	0.38812	1	0.56186	1	1	1	0.82056	1
Del Peak 37(16q23.1)	54 (9%)	520	0.019888	1	0.074997	1	0.34008	1	0.19691	1	0.3793	1	0.52741	1	0.61847	1	0.85721	1	0.59171	1	1	1
Del Peak 38(17p12)	300 (52%)	274	0.52422	1	0.30118	1	0.003674	1	0.45223	1	1.8442e-07	0.000142	0.6986	1	0.0077731	1	0.061066	1	0.18031	1	0.72049	1
Del Peak 39(17q24.3)	59 (10%)	515	0.27805	1	0.3559	1	0.28301	1	0.4087	1	0.61858	1	0.39248	1	0.018817	1	0.12116	1	0.23424	1	0.11343	1
Del Peak 40(18p11.31)	312 (54%)	262	0.82239	1	0.31911	1	1.4061e-05	0.0107	0.6746	1	9.1999e-15	7.17e-12	0.68546	1	0.0051221	1	0.00948	1	0.73846	1	1	1
Del Peak 41(18q12.2)	356 (62%)	218	0.86048	1	0.30344	1	8.029e-07	0.000616	0.54718	1	5.7297e-14	4.46e-11	0.2151	1	0.00045301	0.335	0.024951	1	0.494	1	0.80709	1
Del Peak 42(18q21.2)	374 (65%)	200	0.29535	1	0.22023	1	4.6163e-07	0.000355	0.2536	1	6.4228e-12	4.97e-09	0.15845	1	4.0768e-06	0.00312	0.00096569	0.708	0.50661	1	0.80244	1
Del Peak 43(18q22.1)	369 (64%)	205	0.18991	1	0.48712	1	9.8309e-06	0.00751	0.43282	1	1.2543e-12	9.72e-10	0.20282	1	2.0598e-05	0.0157	0.0032305	1	0.50138	1	1	1
Del Peak 44(19p13.3)	50 (9%)	524	0.46484	1	0.74003	1	0.3218	1	0.1383	1	0.048742	1	0.9405	1	0.1083	1	0.53956	1	1	1	0.83234	1
Del Peak 45(20p12.1)	107 (19%)	467	0.92103	1	0.59927	1	0.015744	1	0.66796	1	0.012687	1	0.80876	1	0.52732	1	0.37585	1	0.22115	1	0.64579	1
Del Peak 46(21q11.2)	137 (24%)	437	0.97338	1	0.74101	1	0.020334	1	1	1	0.0028748	1	0.65657	1	0.27309	1	0.49576	1	0.45162	1	0.57577	1
Del Peak 47(21q22.2)	123 (21%)	451	0.29008	1	0.66827	1	0.0019545	1	0.26236	1	0.0013827	1	0.40243	1	0.2784	1	0.75044	1	1	1	0.7714	1
Del Peak 48(22q13.31)	141 (25%)	433	0.33338	1	0.066298	1	0.016271	1	0.49782	1	0.00037527	0.28	0.50528	1	0.0021108	1	0.045746	1	0.2335	1	0.16801	1