Clinical Features	Time to Death		AGE		GENDER		KARNOFSKY.PERFORMANCE.SCORE		RADIATIONS.RADIATION.REGIMENINDICATION		NEOADJUVANT.THERAPY	
	nCNV (%)	nWild-Type	logrank test_P	logrank test_Q	t-test_P	t-test_Q	Fisher's exact test_P	Fisher's exact test_Q	t-test_P	t-test_Q	Fisher's exact test_P	Fisher's exact test_Q	Fisher's exact test_P	Fisher's exact test_Q
Amp Peak  1(1p36.21)	43 (8%)	497	0.27994	1	0.75696	1	0.52086	1	0.52735	1	0.61301	1	0.20331	1
Amp Peak  2(1q32.1)	108 (20%)	432	0.93398	1	0.12397	1	0.82692	1	0.27774	1	0.72975	1	0.83037	1
Amp Peak  3(1q44)	54 (10%)	486	0.66655	1	0.80919	1	0.46756	1	0.96729	1	1	1	1	1
Amp Peak  4(2p24.3)	31 (6%)	509	0.14624	1	0.065812	1	0.85109	1	0.98562	1	0.072054	1	0.45957	1
Amp Peak  5(3q26.33)	70 (13%)	470	0.82297	1	0.013424	1	0.14988	1	0.57533	1	1	1	0.15777	1
Amp Peak  6(4p16.3)	31 (6%)	509	0.065073	1	0.48304	1	0.57316	1	0.94652	1	0.16405	1	0.19819	1
Amp Peak  7(4q12)	89 (16%)	451	0.91267	1	0.46678	1	0.47749	1	0.91799	1	0.10624	1	0.56153	1
Amp Peak  8(7p11.2)	458 (85%)	82	0.00036673	0.124	3.294e-07	0.000112	0.80664	1	0.10992	1	0.12399	1	0.47187	1
Amp Peak  9(7q21.2)	422 (78%)	118	0.0054808	1	5.6149e-07	0.00019	1	1	0.3476	1	0.22123	1	0.29742	1
Amp Peak 10(7q31.2)	414 (77%)	126	0.094487	1	0.0010236	0.342	0.91728	1	0.32443	1	0.081221	1	0.18735	1
Amp Peak 11(7q32.1)	420 (78%)	120	0.27862	1	0.00054507	0.183	1	1	0.72731	1	0.26783	1	0.21363	1
Amp Peak 12(8q24.21)	42 (8%)	498	0.24909	1	0.057112	1	0.51233	1	0.32315	1	0.73149	1	0.8726	1
Amp Peak 13(12p13.32)	63 (12%)	477	0.82315	1	0.068038	1	0.58745	1	0.44626	1	0.31364	1	0.89359	1
Amp Peak 14(12q14.1)	113 (21%)	427	0.12869	1	0.55878	1	0.38958	1	0.63268	1	0.90967	1	1	1
Amp Peak 15(12q15)	74 (14%)	466	0.55259	1	0.54265	1	0.44339	1	0.74274	1	0.35094	1	0.80332	1
Amp Peak 16(13q34)	15 (3%)	525	0.38654	1	0.89489	1	0.79049	1	0.75281	1	1	1	0.61076	1
Amp Peak 17(14q32.33)	16 (3%)	524	0.10062	1	0.14385	1	1	1	0.22237	1	1	1	1	1
Del Peak  1(1p36.31)	107 (20%)	433	0.89008	1	0.059156	1	0.036419	1	0.64464	1	1	1	0.51662	1
Del Peak  2(1p36.23)	111 (21%)	429	0.78846	1	0.027006	1	0.050349	1	0.90718	1	0.25344	1	0.59532	1
Del Peak  3(1p32.3)	28 (5%)	512	0.79971	1	0.076376	1	0.69666	1	0.39776	1	0.098013	1	0.5617	1
Del Peak  4(1p22.1)	38 (7%)	502	0.24108	1	0.80784	1	1	1	0.16138	1	0.85687	1	1	1
Del Peak  5(1q42.11)	30 (6%)	510	0.75647	1	0.57098	1	0.84838	1	0.14364	1	0.55082	1	0.70977	1
Del Peak  6(1q44)	19 (4%)	521	0.61764	1	0.66772	1	0.81654	1	0.42287	1	1	1	0.48397	1
Del Peak  7(2p25.3)	20 (4%)	520	0.17182	1	0.32109	1	0.066374	1	0.13235	1	0.33054	1	0.82327	1
Del Peak  8(2p14)	22 (4%)	518	0.014085	1	0.1656	1	0.18279	1	0.72061	1	0.24147	1	0.38442	1
Del Peak  9(2q22.1)	15 (3%)	525	0.57468	1	0.66534	1	0.29539	1	0.1578	1	0.1617	1	0.61076	1
Del Peak 10(2q37.1)	26 (5%)	514	0.32606	1	0.049644	1	0.15272	1	0.32263	1	0.67045	1	0.68939	1
Del Peak 11(3q13.31)	38 (7%)	502	0.88713	1	0.17802	1	0.39042	1	0.67214	1	0.58822	1	0.39991	1
Del Peak 12(3q29)	42 (8%)	498	0.30628	1	0.21604	1	0.51233	1	0.9691	1	0.492	1	0.42215	1
Del Peak 13(4q34.3)	53 (10%)	487	0.17394	1	0.6485	1	0.077353	1	0.86865	1	0.16207	1	0.084229	1
Del Peak 14(5q13.1)	25 (5%)	515	0.334	1	0.5751	1	0.21503	1	0.3118	1	0.82696	1	1	1
Del Peak 15(5q34)	27 (5%)	513	0.034006	1	0.09638	1	0.22696	1	0.53213	1	0.39632	1	0.55603	1
Del Peak 16(6q22.31)	105 (19%)	435	0.040782	1	0.48567	1	0.26749	1	0.82423	1	0.81567	1	0.91371	1
Del Peak 17(6q26)	133 (25%)	407	0.29192	1	0.40775	1	0.54195	1	0.82455	1	0.66854	1	0.84175	1
Del Peak 18(9p21.3)	391 (72%)	149	0.043102	1	0.0013447	0.448	0.43191	1	0.19069	1	0.67956	1	0.92338	1
Del Peak 19(10q21.1)	429 (79%)	111	1.8202e-06	0.000615	1.7851e-10	6.11e-08	0.58683	1	0.084923	1	0.067139	1	0.24241	1
Del Peak 20(10q23.31)	451 (84%)	89	0.00050344	0.169	2.4282e-07	8.28e-05	0.72343	1	0.073587	1	0.80391	1	0.41623	1
Del Peak 21(11p15.5)	81 (15%)	459	0.027349	1	0.0024492	0.813	0.53882	1	0.49923	1	1	1	0.80977	1
Del Peak 22(11p11.2)	63 (12%)	477	0.086109	1	0.17907	1	0.33782	1	0.90759	1	0.39206	1	1	1
Del Peak 23(12p13.1)	50 (9%)	490	0.30313	1	0.24986	1	0.54647	1	0.12969	1	0.42643	1	0.46077	1
Del Peak 24(12q12)	54 (10%)	486	0.71324	1	0.73988	1	0.66296	1	0.84083	1	0.44155	1	0.56586	1
Del Peak 25(12q21.31)	40 (7%)	500	0.35068	1	0.26994	1	0.31744	1	0.21685	1	0.48089	1	0.74423	1
Del Peak 26(13q14.2)	189 (35%)	351	0.62379	1	0.63682	1	0.6453	1	0.52353	1	0.49816	1	0.41656	1
Del Peak 27(13q21.2)	181 (34%)	359	0.82051	1	0.62986	1	0.64159	1	0.71744	1	1	1	0.78495	1
Del Peak 28(14q13.1)	147 (27%)	393	0.84187	1	0.7896	1	0.16667	1	0.46776	1	0.91751	1	0.33298	1
Del Peak 29(15q14)	103 (19%)	437	0.39938	1	0.23215	1	0.57605	1	0.97604	1	0.9067	1	0.74305	1
Del Peak 30(15q21.1)	92 (17%)	448	0.27164	1	0.10432	1	0.90746	1	0.69128	1	0.90238	1	0.56853	1
Del Peak 31(16p12.2)	53 (10%)	487	0.17965	1	0.11	1	0.3798	1	0.56559	1	0.27773	1	0.38963	1
Del Peak 32(16q12.1)	54 (10%)	486	0.002636	0.873	0.85062	1	0.76979	1	0.15691	1	0.87776	1	0.25024	1
Del Peak 33(16q23.1)	55 (10%)	485	0.017893	1	0.31119	1	0.56303	1	0.049251	1	0.28878	1	0.19934	1
Del Peak 34(17p13.1)	64 (12%)	476	0.41831	1	0.017948	1	0.056186	1	0.7783	1	0.66912	1	0.28747	1
Del Peak 35(17q11.2)	38 (7%)	502	0.42031	1	0.26031	1	0.49715	1	0.26267	1	1	1	0.39991	1
Del Peak 36(18q22.3)	54 (10%)	486	0.63189	1	0.35783	1	0.46756	1	0.025039	1	1	1	0.31926	1
Del Peak 37(19q13.41)	71 (13%)	469	0.020075	1	0.39661	1	0.89672	1	0.36877	1	0.41216	1	0.61018	1
Del Peak 38(19q13.43)	61 (11%)	479	0.039755	1	0.036329	1	0.58002	1	0.8289	1	0.24308	1	0.892	1
Del Peak 39(21q21.1)	39 (7%)	501	0.9757	1	0.36155	1	0.40171	1	0.67354	1	0.59446	1	0.62092	1
Del Peak 40(22q13.32)	164 (30%)	376	0.85898	1	0.016348	1	0.29369	1	0.55494	1	0.76339	1	1	1