Clinical Features	Time to Death		AGE		GENDER		KARNOFSKY.PERFORMANCE.SCORE		PATHOLOGY.T		PATHOLOGY.N		PATHOLOGICSPREAD(M)		NEOADJUVANT.THERAPY	
	nCNV (%)	nWild-Type	logrank test_P	logrank test_Q	t-test_P	t-test_Q	Fisher's exact test_P	Fisher's exact test_Q	t-test_P	t-test_Q	Fisher's exact test_P	Fisher's exact test_Q	Fisher's exact test_P	Fisher's exact test_Q	Fisher's exact test_P	Fisher's exact test_Q	Fisher's exact test_P	Fisher's exact test_Q
1p gain	10 (2%)	479	0.94056	1	0.99676	1	0.74431	1	NA	NA	0.40729	1	1	1	0.65551	1	1	1
1q gain	37 (8%)	452	0.83944	1	0.019829	1	0.7208	1	0.51805	1	0.56661	1	0.1201	1	0.63404	1	0.32638	1
2p gain	45 (9%)	444	0.92635	1	0.090483	1	0.18821	1	0.56341	1	0.63914	1	1	1	0.27819	1	1	1
2q gain	50 (10%)	439	0.35177	1	0.051197	1	0.011418	1	0.15861	1	0.76061	1	0.22981	1	0.15003	1	1	1
3q gain	25 (5%)	464	0.64241	1	0.84416	1	0.66695	1	0.087474	1	0.36168	1	0.2777	1	0.085256	1	0.022848	1
4p gain	9 (2%)	480	0.058297	1	0.79759	1	0.72552	1	NA	NA	0.090982	1	0.087255	1	1	1	1	1
4q gain	9 (2%)	480	0.34596	1	0.18447	1	1	1	NA	NA	0.15514	1	0.42061	1	1	1	1	1
5p gain	152 (31%)	337	0.65653	1	7.9859e-05	0.0422	0.47315	1	0.66358	1	0.0072824	1	0.79615	1	0.3433	1	0.17664	1
5q gain	231 (47%)	258	0.22838	1	0.0046802	1	0.84929	1	0.94404	1	0.13701	1	0.32679	1	0.70781	1	0.67077	1
6p gain	5 (1%)	484	0.53127	1	0.26367	1	1	1	NA	NA	0.40749	1	1	1	0.56665	1	1	1
6q gain	4 (1%)	485	0.4623	1	0.49143	1	1	1	NA	NA	0.14781	1	1	1	0.48738	1	1	1
7p gain	125 (26%)	364	0.87107	1	0.43352	1	0.081285	1	0.89259	1	0.20294	1	0.29038	1	0.030575	1	0.60603	1
7q gain	126 (26%)	363	0.80513	1	0.55214	1	0.038954	1	0.69945	1	0.18574	1	0.4131	1	0.015066	1	0.11067	1
8p gain	19 (4%)	470	0.4541	1	0.4954	1	0.088356	1	0.75713	1	0.0037977	1	1	1	1	1	1	1
8q gain	38 (8%)	451	0.48911	1	0.19828	1	0.15769	1	0.29715	1	0.0044402	1	0.63927	1	1	1	1	1
9p gain	9 (2%)	480	0.29779	1	0.34323	1	0.070842	1	NA	NA	0.17701	1	1	1	0.36687	1	1	1
9q gain	7 (1%)	482	0.7479	1	0.38385	1	0.24357	1	NA	NA	0.0043318	1	1	1	1	1	1	1
10p gain	5 (1%)	484	0.71106	1	0.095521	1	0.34741	1	NA	NA	0.027291	1	1	1	0.56665	1	0.050292	1
10q gain	3 (1%)	486	0.47775	1	0.34016	1	0.041532	1	NA	NA	0.30096	1	1	1	1	1	0.030424	1
11p gain	16 (3%)	473	0.98118	1	0.94879	1	0.79511	1	0.11501	1	0.029624	1	1	1	0.082015	1	0.15383	1
11q gain	15 (3%)	474	0.61587	1	0.4442	1	0.78392	1	NA	NA	0.036285	1	1	1	0.26414	1	0.14481	1
12p gain	72 (15%)	417	0.058699	1	0.21445	1	0.50304	1	0.40443	1	0.016051	1	0.53388	1	0.020306	1	0.15895	1
12q gain	74 (15%)	415	0.086052	1	0.2675	1	0.35571	1	0.40443	1	0.021661	1	1	1	0.033899	1	0.16649	1
13q gain	16 (3%)	473	0.32316	1	0.98683	1	0.79511	1	NA	NA	0.14794	1	1	1	0.72219	1	0.0094906	1
14q gain	5 (1%)	484	0.43829	1	0.51825	1	1	1	NA	NA	0.0221	1	1	1	0.56665	1	1	1
15q gain	14 (3%)	475	0.86744	1	0.95448	1	0.77928	1	NA	NA	0.23333	1	0.4648	1	0.45984	1	1	1
16p gain	66 (13%)	423	0.5679	1	0.078271	1	0.26865	1	0.39982	1	0.85694	1	0.083716	1	0.71562	1	0.13696	1
16q gain	59 (12%)	430	0.44362	1	0.07524	1	0.11168	1	0.19078	1	0.72992	1	0.1436	1	1	1	0.47571	1
17p gain	17 (3%)	472	0.29651	1	0.46445	1	1	1	NA	NA	0.18793	1	0.54381	1	0.49079	1	0.16277	1
17q gain	22 (4%)	467	0.46017	1	0.19109	1	0.64743	1	0.16133	1	0.1999	1	1	1	0.22582	1	0.20637	1
18p gain	17 (3%)	472	0.10458	1	0.65866	1	0.040389	1	NA	NA	0.92232	1	1	1	0.49079	1	1	1
18q gain	16 (3%)	473	0.10496	1	0.88858	1	0.10558	1	NA	NA	0.72129	1	1	1	0.48619	1	1	1
19p gain	24 (5%)	465	0.62548	1	0.41158	1	0.82708	1	0.16133	1	0.54408	1	1	1	0.77481	1	0.22329	1
19q gain	28 (6%)	461	0.8583	1	0.37368	1	0.68344	1	0.16133	1	0.49104	1	1	1	0.41382	1	0.028427	1
20p gain	50 (10%)	439	0.8406	1	0.96531	1	0.027245	1	0.4734	1	0.17192	1	0.7019	1	0.012931	1	0.41822	1
20q gain	52 (11%)	437	0.80717	1	0.45935	1	0.065617	1	0.4734	1	0.12964	1	0.7019	1	0.063831	1	0.43141	1
21q gain	33 (7%)	456	0.1099	1	0.31331	1	0.85131	1	0.16133	1	0.42245	1	1	1	0.61835	1	1	1
22q gain	23 (5%)	466	0.95711	1	0.80276	1	0.82328	1	NA	NA	0.1699	1	1	1	0.37487	1	1	1
1p loss	35 (7%)	454	0.57511	1	0.32643	1	0.27399	1	0.11501	1	0.26312	1	1	1	0.63155	1	1	1
1q loss	21 (4%)	468	0.4087	1	0.92639	1	0.35321	1	NA	NA	0.21016	1	0.50579	1	0.54601	1	1	1
2p loss	12 (2%)	477	0.89515	1	0.85679	1	0.55566	1	NA	NA	0.01259	1	1	1	0.70239	1	1	1
2q loss	13 (3%)	476	0.7221	1	0.90557	1	0.55678	1	NA	NA	0.034322	1	1	1	0.70211	1	1	1
3p loss	371 (76%)	118	0.10903	1	0.53593	1	1	1	0.78752	1	0.0018288	0.956	0.58405	1	0.055727	1	0.093492	1
3q loss	90 (18%)	399	0.20003	1	0.012968	1	0.04967	1	0.053515	1	0.028493	1	1	1	0.073848	1	0.58987	1
4p loss	31 (6%)	458	0.012426	1	0.93215	1	1	1	0.017614	1	0.0030278	1	1	1	0.29842	1	0.28026	1
4q loss	30 (6%)	459	0.0099543	1	0.53012	1	0.42988	1	0.026091	1	0.00039436	0.207	1	1	0.033005	1	0.27233	1
6p loss	60 (12%)	429	0.26998	1	0.21904	1	0.0037365	1	0.49947	1	0.61977	1	0.39099	1	0.33719	1	0.48181	1
6q loss	95 (19%)	394	0.78644	1	0.34275	1	0.055796	1	0.85135	1	0.95871	1	0.1517	1	0.63638	1	0.25057	1
8p loss	93 (19%)	396	0.43308	1	0.16396	1	0.22675	1	0.081656	1	0.27783	1	0.049815	1	0.87295	1	1	1
8q loss	40 (8%)	449	0.28457	1	0.79541	1	0.015589	1	0.0042519	1	0.91943	1	0.37474	1	0.17576	1	1	1
9p loss	84 (17%)	405	0.0070202	1	0.033869	1	0.011526	1	0.026091	1	0.37012	1	1	1	0.004282	1	0.20553	1
9q loss	84 (17%)	405	0.02172	1	0.017841	1	0.023195	1	0.047262	1	0.14252	1	0.7456	1	0.004282	1	0.20553	1
10p loss	34 (7%)	455	0.71783	1	0.41332	1	0.8531	1	0.0041344	1	0.015909	1	1	1	0.62781	1	1	1
10q loss	55 (11%)	434	0.21597	1	0.095044	1	0.13502	1	0.66028	1	0.0068159	1	0.6491	1	1	1	1	1
11p loss	4 (1%)	485	0.0013101	0.686	0.73721	1	1	1	NA	NA	0.816	1	0.14294	1	0.48738	1	1	1
11q loss	7 (1%)	482	0.32573	1	0.38045	1	0.43035	1	NA	NA	0.70737	1	0.32168	1	0.29262	1	1	1
12p loss	3 (1%)	486	0.83715	1	0.72969	1	1	1	NA	NA	0.74303	1	1	1	1	1	1	1
12q loss	4 (1%)	485	0.17893	1	0.58988	1	1	1	NA	NA	1	1	1	1	1	1	1	1
13q loss	35 (7%)	454	9.0239e-05	0.0476	0.020516	1	0.71675	1	0.004195	1	0.00031972	0.168	0.63032	1	0.046752	1	1	1
14q loss	157 (32%)	332	0.20384	1	0.14542	1	0.36216	1	0.50834	1	0.072355	1	0.19494	1	0.34668	1	0.038694	1
15q loss	11 (2%)	478	0.52115	1	0.048225	1	0.75485	1	NA	NA	0.40568	1	0.37298	1	0.6796	1	1	1
16q loss	6 (1%)	483	0.25625	1	0.057379	1	0.6697	1	NA	NA	0.01238	1	1	1	1	1	1	1
17p loss	28 (6%)	461	0.0081092	1	0.30425	1	0.31144	1	0.11501	1	0.35826	1	0.60808	1	0.17203	1	0.25627	1
17q loss	13 (3%)	476	0.87521	1	0.94971	1	0.23581	1	NA	NA	0.12488	1	1	1	0.43173	1	0.12653	1
18p loss	44 (9%)	445	0.21371	1	0.059967	1	0.50929	1	0.48178	1	0.2493	1	0.67074	1	0.37796	1	0.37717	1
18q loss	50 (10%)	439	0.40767	1	0.15816	1	0.34791	1	0.48178	1	0.47033	1	1	1	0.30774	1	0.41822	1
19p loss	5 (1%)	484	6.8074e-05	0.036	0.68351	1	1	1	NA	NA	0.0097872	1	0.26644	1	0.56665	1	1	1
20p loss	6 (1%)	483	0.75406	1	0.95832	1	1	1	NA	NA	0.88111	1	1	1	1	1	1	1
21q loss	31 (6%)	458	0.82158	1	0.92164	1	1	1	NA	NA	0.0067934	1	0.33584	1	0.20156	1	1	1
22q loss	11 (2%)	478	0.095564	1	0.031733	1	0.75485	1	NA	NA	0.096392	1	1	1	1	1	1	1