Clinical Features	Time to Death		AGE		PRIMARY.SITE.OF.DISEASE		KARNOFSKY.PERFORMANCE.SCORE		RADIATIONS.RADIATION.REGIMENINDICATION		NEOADJUVANT.THERAPY	
	nCNV (%)	nWild-Type	logrank test_P	logrank test_Q	t-test_P	t-test_Q	Fisher's exact test_P	Fisher's exact test_Q	t-test_P	t-test_Q	Fisher's exact test_P	Fisher's exact test_Q	Fisher's exact test_P	Fisher's exact test_Q
1p gain	109 (20%)	443	0.20636	1	0.1831	1	0.025758	1	0.10619	1	0.10105	1	0.68309	1
1q gain	180 (33%)	372	0.77459	1	0.0078155	1	0.10398	1	0.079572	1	1	1	1	1
2p gain	145 (26%)	407	0.13763	1	0.00070175	0.32	1	1	0.48502	1	1	1	0.71096	1
2q gain	114 (21%)	438	0.20299	1	0.011294	1	1	1	0.96379	1	0.50113	1	0.68767	1
3p gain	110 (20%)	442	0.76345	1	0.0014271	0.648	0.59003	1	0.41706	1	1	1	0.17262	1
3q gain	256 (46%)	296	0.78147	1	0.00033797	0.155	0.46548	1	0.51743	1	0.25258	1	0.10175	1
4p gain	38 (7%)	514	0.12734	1	0.69481	1	0.24882	1	0.7465	1	1	1	0.67108	1
4q gain	16 (3%)	536	0.83187	1	0.73613	1	1	1	NA	NA	1	1	0.5179	1
5p gain	169 (31%)	383	0.28744	1	0.18743	1	0.087665	1	0.97642	1	1	1	1	1
5q gain	39 (7%)	513	0.76467	1	0.22725	1	0.25466	1	0.61433	1	1	1	0.52317	1
6p gain	162 (29%)	390	0.10214	1	0.023124	1	0.33662	1	0.0064252	1	0.55925	1	0.28453	1
6q gain	65 (12%)	487	0.57535	1	0.040617	1	0.39504	1	0.15044	1	1	1	0.23608	1
7p gain	135 (24%)	417	0.76969	1	0.015299	1	0.25217	1	0.042675	1	1	1	0.52779	1
7q gain	177 (32%)	375	0.068726	1	0.024185	1	0.38481	1	0.0014117	0.642	0.55481	1	0.29482	1
8p gain	71 (13%)	481	0.41213	1	0.70021	1	1	1	0.65683	1	0.3389	1	0.074427	1
8q gain	255 (46%)	297	0.13749	1	0.35252	1	0.752	1	0.98091	1	1	1	0.22973	1
9p gain	70 (13%)	482	0.85123	1	0.085819	1	1	1	0.59856	1	1	1	0.87002	1
9q gain	28 (5%)	524	0.63117	1	0.58928	1	1	1	NA	NA	1	1	1	1
10p gain	154 (28%)	398	0.47372	1	9.881e-06	0.00456	0.14905	1	0.28078	1	1	1	0.22728	1
10q gain	74 (13%)	478	0.34117	1	0.16655	1	0.43867	1	0.39421	1	1	1	0.20253	1
11p gain	49 (9%)	503	0.084823	1	0.64019	1	1	1	0.40704	1	1	1	0.083556	1
11q gain	91 (16%)	461	0.60252	1	0.038548	1	1	1	0.19245	1	1	1	0.56071	1
12p gain	213 (39%)	339	0.28072	1	5.5191e-06	0.00256	0.27514	1	0.043869	1	0.56231	1	0.21871	1
12q gain	121 (22%)	431	0.12565	1	9.7002e-06	0.00448	0.21046	1	0.26134	1	1	1	0.59894	1
13q gain	53 (10%)	499	0.84265	1	0.012727	1	1	1	0.23207	1	0.2617	1	0.09397	1
14q gain	31 (6%)	521	0.46557	1	0.90875	1	0.20693	1	0.39239	1	1	1	1	1
15q gain	26 (5%)	526	0.35764	1	0.72439	1	1	1	NA	NA	1	1	0.80034	1
16p gain	38 (7%)	514	0.14055	1	0.2666	1	1	1	0.029242	1	1	1	0.82965	1
16q gain	17 (3%)	535	0.67399	1	0.88625	1	1	1	0.21989	1	1	1	1	1
17p gain	18 (3%)	534	0.93379	1	0.76369	1	1	1	0.76749	1	1	1	0.21937	1
17q gain	41 (7%)	511	0.59523	1	0.2275	1	1	1	0.91321	1	1	1	0.5407	1
18p gain	89 (16%)	463	0.31072	1	0.079732	1	1	1	0.55701	1	1	1	0.02548	1
18q gain	43 (8%)	509	0.55589	1	0.56325	1	1	1	0.25158	1	1	1	0.30802	1
19p gain	114 (21%)	438	0.5012	1	0.017088	1	0.60472	1	0.31006	1	0.50113	1	0.78832	1
19q gain	92 (17%)	460	0.32335	1	0.042376	1	0.5188	1	0.65683	1	0.42193	1	0.46541	1
20p gain	233 (42%)	319	0.2023	1	2.2029e-05	0.0101	0.32418	1	0.043869	1	0.57612	1	0.078686	1
20q gain	273 (49%)	279	0.21336	1	0.00038398	0.175	0.74915	1	0.27949	1	0.62027	1	0.3294	1
21q gain	77 (14%)	475	0.13884	1	0.031588	1	1	1	0.40704	1	1	1	0.87561	1
22q gain	13 (2%)	539	0.34449	1	0.20636	1	1	1	0.0033924	1	1	1	0.28002	1
1p loss	40 (7%)	512	0.55324	1	0.35239	1	1	1	0.46442	1	0.20236	1	0.53085	1
1q loss	25 (5%)	527	0.68452	1	0.84564	1	1	1	0.49841	1	0.13003	1	0.1116	1
2p loss	27 (5%)	525	0.50177	1	0.60136	1	1	1	0.073101	1	1	1	0.80109	1
2q loss	29 (5%)	523	0.69058	1	0.19898	1	0.19464	1	0.10221	1	1	1	0.22385	1
3p loss	78 (14%)	474	0.33725	1	0.59246	1	1	1	0.33854	1	0.3674	1	0.11713	1
3q loss	22 (4%)	530	0.11643	1	0.38881	1	1	1	0.49841	1	0.11506	1	0.15769	1
4p loss	280 (51%)	272	0.57231	1	0.13698	1	0.49191	1	0.54629	1	1	1	0.58691	1
4q loss	320 (58%)	232	0.92019	1	0.11502	1	0.32167	1	0.43968	1	1	1	0.50867	1
5p loss	100 (18%)	452	0.3182	1	0.35102	1	1	1	0.48237	1	0.45163	1	0.57216	1
5q loss	213 (39%)	339	0.97089	1	0.89482	1	0.77465	1	0.62105	1	0.56231	1	0.31437	1
6p loss	134 (24%)	418	0.49764	1	0.0068172	1	0.67234	1	0.50266	1	0.56654	1	0.52574	1
6q loss	237 (43%)	315	0.7323	1	9.3699e-06	0.00434	1	1	0.24753	1	1	1	0.74254	1
7p loss	106 (19%)	446	0.46218	1	0.16225	1	0.57493	1	0.13913	1	1	1	1	1
7q loss	54 (10%)	498	0.80134	1	0.44712	1	0.33832	1	0.9211	1	0.26614	1	0.14483	1
8p loss	289 (52%)	263	0.49078	1	0.25726	1	0.75021	1	0.2542	1	1	1	0.38343	1
8q loss	70 (13%)	482	0.50859	1	0.28022	1	1	1	0.06041	1	1	1	0.87002	1
9p loss	243 (44%)	309	0.7138	1	0.028574	1	0.15892	1	0.95709	1	0.58525	1	0.27365	1
9q loss	274 (50%)	278	0.7799	1	0.00014712	0.0675	0.18548	1	0.41707	1	0.62161	1	1	1
10p loss	89 (16%)	463	0.97949	1	0.52888	1	1	1	0.99453	1	0.069104	1	0.30236	1
10q loss	117 (21%)	435	0.54138	1	0.91723	1	1	1	0.86211	1	0.0093301	1	0.06314	1
11p loss	182 (33%)	370	0.43491	1	0.17518	1	1	1	0.62105	1	0.25403	1	0.81744	1
11q loss	120 (22%)	432	0.36219	1	0.088793	1	0.62601	1	0.24298	1	0.5214	1	0.69418	1
12p loss	63 (11%)	489	0.46895	1	0.042708	1	1	1	0.16936	1	1	1	0.23113	1
12q loss	99 (18%)	453	0.67821	1	0.012217	1	1	1	0.73708	1	1	1	0.57026	1
13q loss	266 (48%)	286	0.90377	1	0.75256	1	0.48156	1	0.4493	1	1	1	0.32711	1
14q loss	197 (36%)	355	0.21491	1	0.38712	1	0.40802	1	0.63697	1	0.55602	1	0.42656	1
15q loss	228 (41%)	324	0.80904	1	0.057101	1	0.31167	1	0.59566	1	0.57209	1	0.04747	1
16p loss	283 (51%)	269	0.31867	1	0.2651	1	0.74941	1	0.010881	1	0.615	1	0.74468	1
16q loss	388 (70%)	164	0.29548	1	0.034445	1	1	1	0.054911	1	0.55837	1	0.40495	1
17p loss	419 (76%)	133	0.783	1	0.014759	1	0.24611	1	0.6712	1	0.14567	1	0.89879	1
17q loss	317 (57%)	235	0.16639	1	0.033653	1	1	1	0.2988	1	0.57784	1	0.061459	1
18p loss	198 (36%)	354	0.30052	1	0.61196	1	0.40837	1	0.70896	1	0.045702	1	0.1736	1
18q loss	267 (48%)	285	0.70357	1	0.24026	1	0.24963	1	0.16687	1	0.11251	1	0.19152	1
19p loss	169 (31%)	383	0.84075	1	0.61496	1	0.76935	1	0.77011	1	0.22336	1	1	1
19q loss	186 (34%)	366	0.53857	1	0.51946	1	0.79979	1	0.72534	1	0.55439	1	0.81887	1
20p loss	45 (8%)	507	0.054958	1	0.14105	1	1	1	0.9211	1	0.22554	1	0.69196	1
20q loss	23 (4%)	529	0.15191	1	0.88692	1	1	1	NA	NA	1	1	0.41108	1
21q loss	159 (29%)	393	0.5485	1	0.87568	1	0.7442	1	0.72534	1	1	1	0.63188	1
22q loss	393 (71%)	159	0.6624	1	0.97041	1	0.074212	1	0.73708	1	0.56072	1	0.54824	1