Clinical Features Time to Death AGE HISTOLOGICAL.TYPE RADIATIONS.RADIATION.REGIMENINDICATION NEOADJUVANT.THERAPY nCNV (%) nWild-Type logrank test_P logrank test_Q t-test_P t-test_Q Chi-square test_P Chi-square test_Q Fisher's exact test_P Fisher's exact test_Q Fisher's exact test_P Fisher's exact test_Q 1p gain 19 (5%) 391 0.30247 1 0.1591 1 0.45226 1 0.80172 1 0.27929 1 1q gain 132 (32%) 278 0.59998 1 0.23883 1 0.013461 1 0.90982 1 0.14463 1 2p gain 57 (14%) 353 0.053209 1 0.015856 1 0.0015387 0.508 0.2229 1 0.25326 1 2q gain 36 (9%) 374 0.068926 1 0.37328 1 0.14029 1 0.45458 1 0.15838 1 3p gain 27 (7%) 383 0.27628 1 0.20784 1 0.51149 1 0.29455 1 1 1 3q gain 56 (14%) 354 0.1003 1 0.03102 1 1.5972e-07 5.83e-05 0.2808 1 0.40835 1 4p gain 7 (2%) 403 0.53233 1 0.029348 1 0.076971 1 0.68473 1 0.37672 1 4q gain 3 (1%) 407 0.53998 1 0.2277 1 0.46385 1 1 1 0.57439 1 5p gain 32 (8%) 378 0.011126 1 0.03131 1 2.9116e-07 0.000106 0.69718 1 0.4051 1 5q gain 9 (2%) 401 0.34582 1 0.9048 1 0.10109 1 0.72486 1 0.049876 1 6p gain 32 (8%) 378 0.73057 1 0.48784 1 0.010288 1 0.84374 1 0.28857 1 6q gain 25 (6%) 385 0.46577 1 0.31987 1 0.055893 1 0.38177 1 0.097101 1 7p gain 34 (8%) 376 0.11444 1 0.52225 1 0.19174 1 0.3386 1 0.68068 1 7q gain 34 (8%) 376 0.003353 1 0.94037 1 0.27768 1 0.3386 1 0.15424 1 8p gain 68 (17%) 342 0.0029268 0.945 0.12675 1 0.29685 1 0.67129 1 1 1 8q gain 96 (23%) 314 0.0064819 1 0.94178 1 0.073717 1 0.70916 1 0.082149 1 9p gain 11 (3%) 399 0.87484 1 0.63998 1 0.93279 1 0.18576 1 0.1558 1 10p gain 79 (19%) 331 0.64094 1 0.66843 1 0.31403 1 0.89331 1 0.77495 1 10q gain 73 (18%) 337 0.93652 1 0.86267 1 0.33922 1 0.89014 1 0.88276 1 11p gain 6 (1%) 404 0.4089 1 0.38305 1 0.51018 1 1 1 0.0046637 1 11q gain 10 (2%) 400 0.94298 1 0.57053 1 0.90789 1 1 1 0.28225 1 12p gain 31 (8%) 379 0.69548 1 0.94965 1 0.11111 1 1 1 0.66828 1 12q gain 24 (6%) 386 0.7315 1 0.33895 1 0.55466 1 1 1 0.63413 1 13q gain 22 (5%) 388 0.89621 1 0.00047332 0.161 1.8599e-05 0.00655 0.35536 1 0.12667 1 14q gain 13 (3%) 397 0.20368 1 0.7035 1 0.47663 1 0.070058 1 0.74602 1 15q gain 5 (1%) 405 0.06242 1 0.4567 1 0.94354 1 0.1821 1 0.10611 1 16p gain 11 (3%) 399 0.36698 1 0.085155 1 0.27758 1 0.51432 1 1 1 16q gain 4 (1%) 406 0.60431 1 0.25581 1 0.74485 1 1 1 1 1 17p gain 8 (2%) 402 0.0084474 1 0.53135 1 0.79204 1 0.27361 1 0.1168 1 17q gain 16 (4%) 394 0.042121 1 0.08352 1 0.73291 1 0.16827 1 0.25158 1 18p gain 27 (7%) 383 0.13792 1 0.00073111 0.243 2.4865e-07 9.05e-05 0.66968 1 1 1 18q gain 14 (3%) 396 0.010663 1 0.079297 1 0.051728 1 0.56238 1 0.025453 1 19p gain 27 (7%) 383 0.32813 1 4.6246e-06 0.00165 1.0162e-05 0.0036 0.05474 1 1 1 19q gain 25 (6%) 385 0.00087994 0.292 9.9311e-06 0.00353 1.8588e-08 6.86e-06 0.38177 1 0.0034122 1 20p gain 42 (10%) 368 0.066291 1 0.017836 1 0.00014545 0.0499 0.29505 1 0.059897 1 20q gain 51 (12%) 359 0.45345 1 0.003812 1 2.4664e-09 9.22e-07 0.053371 1 0.056985 1 21q gain 15 (4%) 395 0.57339 1 0.027871 1 0.0011771 0.39 0.78305 1 0.22446 1 22q gain 7 (2%) 403 0.51534 1 0.11533 1 0.18154 1 1 1 1 1 1p loss 13 (3%) 397 0.068125 1 0.14344 1 0.1323 1 1 1 0.5301 1 1q loss 7 (2%) 403 0.053414 1 0.36855 1 0.014346 1 1 1 0.68427 1 2p loss 6 (1%) 404 0.34913 1 0.20405 1 0.14816 1 0.18307 1 0.34449 1 2q loss 9 (2%) 401 0.46831 1 0.067521 1 0.3033 1 0.062955 1 0.45898 1 3p loss 30 (7%) 380 0.096027 1 0.00072745 0.243 0.00010473 0.0362 1 1 0.027654 1 3q loss 11 (3%) 399 0.28284 1 0.13753 1 0.25155 1 0.51432 1 1 1 4p loss 46 (11%) 364 0.063514 1 0.00054283 0.183 2.6645e-11 1.01e-08 0.24331 1 1 1 4q loss 42 (10%) 368 0.035709 1 0.0019613 0.637 1.2377e-10 4.67e-08 0.07937 1 0.58026 1 5p loss 20 (5%) 390 0.95773 1 0.20828 1 7.3234e-07 0.000265 1 1 1 1 5q loss 35 (9%) 375 0.89919 1 0.0058267 1 4.8816e-13 1.86e-10 0.56988 1 0.10529 1 6p loss 7 (2%) 403 0.67989 1 0.048343 1 0.18154 1 1 1 0.37672 1 6q loss 11 (3%) 399 0.51971 1 0.24568 1 0.27758 1 0.33912 1 1 1 7p loss 31 (8%) 379 0.51353 1 0.00062103 0.209 2.3855e-05 0.00835 0.84219 1 0.033013 1 7q loss 27 (7%) 383 0.52329 1 9.2419e-05 0.0321 1.2783e-10 4.81e-08 0.83442 1 0.0099143 1 8p loss 45 (11%) 365 0.94144 1 0.00617 1 7.0246e-19 2.7e-16 1 1 0.010075 1 8q loss 10 (2%) 400 0.99983 1 0.31144 1 3.2378e-05 0.0113 1 1 0.28225 1 9p loss 60 (15%) 350 0.61945 1 1.6915e-06 0.000607 3.2668e-13 1.25e-10 0.76666 1 0.01595 1 9q loss 75 (18%) 335 0.29101 1 8.5953e-09 3.2e-06 1.0463e-12 3.98e-10 0.33774 1 0.14522 1 10p loss 21 (5%) 389 0.013829 1 0.036215 1 0.0058056 1 0.63139 1 0.19732 1 10q loss 22 (5%) 388 0.21187 1 0.048503 1 0.42286 1 1 1 0.45762 1 11p loss 45 (11%) 365 0.00051647 0.175 8.3914e-07 0.000303 6.58e-09 2.45e-06 0.31026 1 0.047371 1 11q loss 43 (10%) 367 0.022311 1 0.00012402 0.0428 1.02e-05 0.0036 0.22866 1 0.065536 1 12p loss 19 (5%) 391 0.17815 1 0.00070249 0.235 0.00023282 0.0796 1 1 0.5893 1 12q loss 13 (3%) 397 0.88142 1 0.11396 1 0.0016161 0.532 1 1 0.74602 1 13q loss 40 (10%) 370 0.17714 1 0.0018662 0.612 0.013592 1 0.59542 1 1 1 14q loss 32 (8%) 378 0.18069 1 0.00013281 0.0457 8.0604e-08 2.97e-05 1 1 0.0057323 1 15q loss 63 (15%) 347 0.58509 1 3.4666e-06 0.00124 9.9406e-12 3.77e-09 0.1441 1 0.21074 1 16p loss 51 (12%) 359 0.13014 1 8.406e-06 0.00299 6.9294e-10 2.6e-07 0.33762 1 0.056985 1 16q loss 87 (21%) 323 0.059976 1 1.3861e-07 5.09e-05 3.5321e-13 1.35e-10 0.69858 1 0.036734 1 17p loss 75 (18%) 335 0.77369 1 8.6887e-09 3.22e-06 1.848e-17 7.1e-15 0.8912 1 0.0019549 0.637 17q loss 48 (12%) 362 0.41807 1 0.00054685 0.184 1.4884e-07 5.45e-05 0.18794 1 0.72801 1 18p loss 24 (6%) 386 0.20672 1 0.10809 1 0.01382 1 0.50804 1 0.22398 1 18q loss 38 (9%) 372 0.7842 1 0.0019028 0.622 2.2001e-05 0.00772 0.27894 1 0.048826 1 19p loss 33 (8%) 377 0.19463 1 0.026554 1 1.479e-08 5.47e-06 1 1 0.034534 1 19q loss 24 (6%) 386 0.51482 1 0.025988 1 5.6754e-05 0.0198 1 1 0.63413 1 20p loss 11 (3%) 399 0.2068 1 0.062228 1 0.21223 1 0.11298 1 0.48106 1 20q loss 5 (1%) 405 0.50346 1 0.4805 1 0.74372 1 0.65645 1 0.33576 1 21q loss 22 (5%) 388 0.16545 1 0.42622 1 0.0028714 0.93 0.64381 1 0.8042 1 22q loss 64 (16%) 346 0.09714 1 0.00048635 0.165 1.2336e-06 0.000444 0.56001 1 0.15896 1