Clinical Features	Time to Death		AGE		HISTOLOGICAL.TYPE		RADIATIONS.RADIATION.REGIMENINDICATION		NEOADJUVANT.THERAPY	
	nCNV (%)	nWild-Type	logrank test_P	logrank test_Q	t-test_P	t-test_Q	Chi-square test_P	Chi-square test_Q	Fisher's exact test_P	Fisher's exact test_Q	Fisher's exact test_P	Fisher's exact test_Q
Amp Peak  1(1p34.2)	26 (6%)	384	0.84255	1	0.0010266	0.331	1.0869e-08	4.33e-06	1	1	0.15921	1
Amp Peak  2(1p22.3)	53 (13%)	357	0.87775	1	0.22398	1	0.27142	1	0.75348	1	0.49953	1
Amp Peak  3(1q21.3)	160 (39%)	250	0.30798	1	0.00037503	0.126	0.044042	1	1	1	0.72871	1
Amp Peak  4(1q22)	170 (41%)	240	0.059366	1	3.0975e-05	0.011	0.015913	1	1	1	0.64659	1
Amp Peak  5(2p23.2)	72 (18%)	338	0.057429	1	0.0034468	1	2.6307e-07	0.000101	0.052579	1	0.456	1
Amp Peak  6(2q13)	66 (16%)	344	0.072	1	0.0012372	0.393	4.6915e-08	1.82e-05	0.7753	1	0.063632	1
Amp Peak  7(3p25.1)	48 (12%)	362	0.3207	1	0.00057284	0.189	3.3262e-07	0.000127	0.32442	1	0.37689	1
Amp Peak  8(3q26.2)	100 (24%)	310	0.21183	1	1.4699e-07	5.67e-05	2.6409e-18	1.14e-15	0.10852	1	0.025153	1
Amp Peak  9(3q26.2)	95 (23%)	315	0.050003	1	3.7535e-05	0.0132	7.902e-19	3.41e-16	0.13196	1	0.079776	1
Amp Peak 10(4p16.3)	27 (7%)	383	0.89497	1	6.9913e-06	0.00254	2.5324e-13	1.07e-10	0.5308	1	0.036373	1
Amp Peak 11(5p15.33)	48 (12%)	362	0.017909	1	0.0097857	1	6.5473e-12	2.72e-09	1	1	0.21554	1
Amp Peak 12(6p24.2)	58 (14%)	352	0.94874	1	0.00032734	0.111	1.5339e-10	6.26e-08	0.76143	1	0.32816	1
Amp Peak 13(6q16.3)	32 (8%)	378	0.41355	1	0.088537	1	0.0017928	0.563	0.69718	1	0.28857	1
Amp Peak 14(7q22.1)	47 (11%)	363	0.0042461	1	0.22578	1	0.086143	1	0.099789	1	0.37393	1
Amp Peak 15(8p11.22)	79 (19%)	331	0.0032347	0.974	0.14821	1	0.50574	1	0.78938	1	0.39125	1
Amp Peak 16(8p11.21)	98 (24%)	312	4.9837e-06	0.00182	0.9408	1	0.00056267	0.186	0.32139	1	0.18426	1
Amp Peak 17(8q24.21)	125 (30%)	285	0.00063721	0.208	0.14633	1	1.2007e-08	4.75e-06	0.42088	1	0.001346	0.427
Amp Peak 18(8q24.21)	132 (32%)	278	0.0068093	1	0.04885	1	1.2238e-09	4.91e-07	0.17494	1	0.0073171	1
Amp Peak 19(9p24.2)	33 (8%)	377	0.53411	1	0.080751	1	7.6953e-06	0.00279	0.24186	1	0.14508	1
Amp Peak 20(9q34.3)	20 (5%)	390	0.0031082	0.939	0.001106	0.354	9.116e-07	0.000344	1	1	0.060694	1
Amp Peak 21(10q22.2)	96 (23%)	314	0.3444	1	0.43664	1	0.12767	1	1	1	0.50367	1
Amp Peak 22(11p11.2)	23 (6%)	387	0.38371	1	0.00059796	0.197	3.3658e-08	1.31e-05	1	1	0.13866	1
Amp Peak 23(11q13.2)	33 (8%)	377	0.21949	1	0.20776	1	0.00010083	0.0348	0.84757	1	0.010769	1
Amp Peak 24(11q22.2)	24 (6%)	386	0.14494	1	0.0010005	0.323	9.7416e-05	0.0337	0.17425	1	0.027211	1
Amp Peak 25(12p13.33)	43 (10%)	367	0.39424	1	0.40467	1	0.0023971	0.736	1	1	0.13998	1
Amp Peak 26(12q13.11)	46 (11%)	364	0.54273	1	0.34838	1	0.0018064	0.565	1	1	0.59522	1
Amp Peak 27(12q13.2)	50 (12%)	360	0.51181	1	0.15734	1	9.1134e-06	0.00329	0.41876	1	0.7287	1
Amp Peak 28(14q24.3)	30 (7%)	380	0.7718	1	0.013424	1	3.5734e-07	0.000137	0.16037	1	0.078577	1
Amp Peak 29(14q32.33)	31 (8%)	379	0.11929	1	0.030345	1	1.5091e-06	0.000563	0.31746	1	0.086777	1
Amp Peak 30(15q26.3)	17 (4%)	393	0.78602	1	0.41076	1	0.17995	1	0.10751	1	0.15305	1
Amp Peak 31(16p11.2)	33 (8%)	377	0.1951	1	0.0014725	0.465	1.635e-14	6.93e-12	0.33683	1	0.0029064	0.886
Amp Peak 32(17p11.2)	14 (3%)	396	0.41375	1	0.48635	1	0.00039818	0.133	0.39006	1	0.05388	1
Amp Peak 33(17q11.2)	36 (9%)	374	0.014325	1	0.0030999	0.939	6.2523e-11	2.56e-08	0.26099	1	0.15838	1
Amp Peak 34(17q12)	46 (11%)	364	0.031877	1	4.5262e-05	0.0159	1.4387e-15	6.11e-13	0.5023	1	0.0018261	0.57
Amp Peak 35(17q21.32)	36 (9%)	374	0.012999	1	2.5205e-05	0.00902	3.7366e-06	0.00138	0.57827	1	0.15838	1
Amp Peak 36(18q11.2)	32 (8%)	378	0.0135	1	0.0012152	0.388	2.4879e-08	9.78e-06	0.43523	1	0.83257	1
Amp Peak 37(19p13.2)	49 (12%)	361	0.79928	1	2.2953e-10	9.32e-08	8.0976e-16	3.45e-13	0.073032	1	0.72743	1
Amp Peak 38(19p13.13)	53 (13%)	357	0.59358	1	4.8838e-11	2.01e-08	3.4634e-19	1.5e-16	0.1548	1	0.23855	1
Amp Peak 39(19q12)	49 (12%)	361	0.02326	1	8.837e-07	0.000334	6.0763e-24	2.67e-21	0.51386	1	3.6841e-05	0.013
Amp Peak 40(20p13)	50 (12%)	360	0.17061	1	0.013286	1	2.2435e-06	0.000832	0.14435	1	0.081851	1
Amp Peak 41(20q11.21)	65 (16%)	345	0.90416	1	0.00018675	0.0639	7.3721e-20	3.2e-17	0.47059	1	0.02866	1
Amp Peak 42(20q13.12)	67 (16%)	343	0.10102	1	7.4447e-05	0.0259	3.1481e-18	1.35e-15	0.15171	1	0.020545	1
Amp Peak 43(20q13.33)	68 (17%)	342	0.45245	1	0.00019507	0.0665	1.9525e-11	8.06e-09	0.1179	1	0.02211	1
Del Peak  1(1p36.31)	40 (10%)	370	0.36773	1	0.0023324	0.721	0.00040296	0.134	0.47599	1	0.17897	1
Del Peak  2(1p36.11)	46 (11%)	364	0.14966	1	0.00062913	0.206	5.6488e-10	2.27e-07	0.86828	1	0.27968	1
Del Peak  3(2q22.1)	26 (6%)	384	3.3876e-05	0.012	0.030841	1	0.0030736	0.934	0.027575	1	1	1
Del Peak  4(2q37.3)	24 (6%)	386	0.66808	1	0.0072631	1	0.11944	1	0.82594	1	0.22398	1
Del Peak  5(3p14.2)	40 (10%)	370	0.42466	1	2.9715e-05	0.0106	4.562e-10	1.84e-07	0.85965	1	0.17897	1
Del Peak  6(4p16.3)	45 (11%)	365	0.12471	1	0.00013238	0.0454	3.7952e-11	1.56e-08	0.49948	1	0.36562	1
Del Peak  7(4q22.1)	46 (11%)	364	0.028968	1	0.00076283	0.249	1.1848e-12	4.96e-10	0.13234	1	0.27968	1
Del Peak  8(4q34.3)	63 (15%)	347	0.26933	1	6.4824e-05	0.0227	3.0388e-17	1.3e-14	0.56095	1	0.0070305	1
Del Peak  9(5q11.2)	53 (13%)	357	0.45846	1	7.9812e-05	0.0277	1.1272e-21	4.91e-19	1	1	0.016866	1
Del Peak 10(6q26)	24 (6%)	386	0.5545	1	0.090607	1	0.00087635	0.284	0.65221	1	1	1
Del Peak 11(7p22.3)	44 (11%)	366	0.042632	1	0.00011848	0.0408	2.6525e-10	1.07e-07	1	1	0.042676	1
Del Peak 12(7q11.22)	20 (5%)	390	0.39514	1	0.006217	1	0.00025397	0.0863	1	1	0.18382	1
Del Peak 13(7q36.1)	40 (10%)	370	0.20318	1	1.1469e-06	0.00043	6.8085e-20	2.96e-17	0.47599	1	0.0017322	0.546
Del Peak 14(8p23.3)	62 (15%)	348	0.65058	1	0.0060532	1	5.7131e-22	2.5e-19	0.65891	1	0.0064994	1
Del Peak 15(8p11.22)	31 (8%)	379	0.52148	1	0.0010819	0.347	1.6853e-12	7.04e-10	0.84219	1	0.033013	1
Del Peak 16(9p23)	36 (9%)	374	0.43866	1	0.00032169	0.109	2.9502e-08	1.15e-05	0.70884	1	0.069178	1
Del Peak 17(9q34.11)	75 (18%)	335	0.46366	1	2.5125e-08	9.85e-06	1.515e-10	6.2e-08	0.68148	1	0.026952	1
Del Peak 18(10q21.2)	17 (4%)	393	0.77574	1	0.34706	1	0.027381	1	0.79292	1	0.39229	1
Del Peak 19(10q23.31)	36 (9%)	374	0.41434	1	0.18758	1	0.1212	1	0.13289	1	0.31482	1
Del Peak 20(11p15.5)	54 (13%)	356	0.013373	1	2.259e-06	0.000836	2.6327e-12	1.1e-09	0.34995	1	0.0038067	1
Del Peak 21(11q14.1)	38 (9%)	372	0.0076606	1	0.00034005	0.115	1.6335e-08	6.44e-06	0.47188	1	0.11551	1
Del Peak 22(11q24.2)	48 (12%)	362	0.0023633	0.728	7.0335e-05	0.0245	7.8376e-09	3.13e-06	0.51188	1	0.051256	1
Del Peak 23(12q23.1)	19 (5%)	391	0.58875	1	0.049504	1	0.022267	1	0.80172	1	0.27929	1
Del Peak 24(12q24.33)	26 (6%)	384	0.49597	1	0.00039792	0.133	3.8131e-06	0.0014	0.38873	1	0.25327	1
Del Peak 25(13q11)	43 (10%)	367	0.30457	1	0.00034625	0.116	2.0001e-06	0.000744	0.39114	1	0.46015	1
Del Peak 26(13q14.2)	45 (11%)	365	0.37627	1	0.0027729	0.849	0.013801	1	0.31026	1	1	1
Del Peak 27(14q13.1)	34 (8%)	376	0.0096556	1	3.6503e-05	0.0129	6.3023e-07	0.000239	1	1	0.03797	1
Del Peak 28(15q15.1)	73 (18%)	337	0.19792	1	1.2619e-06	0.000472	1.7332e-10	7.05e-08	0.16651	1	0.07405	1
Del Peak 29(15q23)	57 (14%)	353	0.10831	1	5.0675e-06	0.00185	1.9108e-11	7.91e-09	0.54351	1	0.07322	1
Del Peak 30(16p13.3)	43 (10%)	367	0.0039803	1	9.225e-07	0.000347	4.0119e-07	0.000153	0.39114	1	0.85388	1
Del Peak 31(16q22.3)	95 (23%)	315	0.16904	1	8.698e-08	3.37e-05	3.4568e-16	1.48e-13	0.61635	1	0.043122	1
Del Peak 32(16q23.1)	100 (24%)	310	0.13301	1	1.2719e-08	5.02e-06	3.6191e-19	1.56e-16	0.5378	1	0.0034328	1
Del Peak 33(17p13.3)	61 (15%)	349	0.20113	1	2.1399e-05	0.00768	1.1738e-11	4.87e-09	0.55205	1	0.0038171	1
Del Peak 34(17p11.2)	71 (17%)	339	0.13526	1	4.1958e-07	0.000159	2.7979e-22	1.23e-19	0.33004	1	0.0041513	1
Del Peak 35(17p11.2)	64 (16%)	346	0.42985	1	2.365e-06	0.000873	3.3287e-14	1.41e-11	1	1	0.085067	1
Del Peak 36(17q11.2)	60 (15%)	350	0.93759	1	1.2766e-05	0.0046	3.1886e-09	1.28e-06	0.37236	1	0.14786	1
Del Peak 37(17q21.2)	61 (15%)	349	0.57977	1	5.3733e-06	0.00196	2.8745e-10	1.16e-07	0.23351	1	0.054417	1
Del Peak 38(18q23)	50 (12%)	360	0.07495	1	0.0034198	1	1.1413e-07	4.42e-05	0.023812	1	0.7287	1
Del Peak 39(19p13.3)	95 (23%)	315	0.034605	1	3.1368e-13	1.32e-10	2.8615e-42	1.26e-39	0.45216	1	0.001928	0.6
Del Peak 40(19q13.43)	28 (7%)	382	0.0091642	1	0.00082021	0.267	1.1409e-08	4.53e-06	0.67719	1	0.040541	1
Del Peak 41(20p12.1)	19 (5%)	391	0.53721	1	0.0078048	1	0.15514	1	1	1	1	1
Del Peak 42(20q13.12)	6 (1%)	404	0.53556	1	0.051708	1	0.65368	1	0.085491	1	1	1
Del Peak 43(22q11.1)	41 (10%)	369	0.78676	1	0.0022485	0.697	0.074849	1	0.29623	1	0.34562	1
Del Peak 44(22q12.1)	51 (12%)	359	0.47472	1	0.01725	1	0.025427	1	0.20016	1	0.17097	1
Del Peak 45(22q13.32)	79 (19%)	331	0.057234	1	1.839e-07	7.08e-05	2.4348e-13	1.03e-10	0.42245	1	0.06055	1