Broad GDAC Analyses Status
analyses__2012_08_25__sarc_00 Run for Tumor Type: SARC

TumorBCRClinicalCNLowPMethylationmRNAmRNAseqmiRmiRseqRPPAMAF
SARC2902000000000

Note that the links below require Broad internal Firehose login credentials.

PipelineNotRunnableRunnableInProcessSuccessfulUnsuccessful
1Aggregate_Clusters10000
2Aggregate_Gene_Status00010
3CopyNumber_Clustering_CNMF10000
4CopyNumber_GeneBySample00010
5CopyNumber_Gistic200010
6CopyNumber_Gistic2_Postprocess_Focal00010
7Correlate_Clinical_vs_CopyNumber_Arm10000
8Correlate_Clinical_vs_CopyNumber_Focal10000
9Correlate_Clinical_vs_Methylation10000
10Correlate_Clinical_vs_miR10000
11Correlate_Clinical_vs_miRseq10000
12Correlate_Clinical_vs_Molecular_Signatures10000
13Correlate_Clinical_vs_mRNA10000
14Correlate_Clinical_vs_mRNAseq10000
15Correlate_Clinical_vs_Mutation10000
16Correlate_Clinical_vs_RPPA10000
17Correlate_CopyNumber_vs_miR10000
18Correlate_CopyNumber_vs_mRNA10000
19Correlate_CopyNumber_vs_mRNAseq10000
20Correlate_Methylation_vs_mRNA10000
21Methylation_Clustering_CNMF10000
22Methylation_Preprocess10000
23miRseq_Clustering_CNMF10000
24miRseq_Clustering_Consensus10000
25miRseq_Preprocess10000
26miR_Clustering_CNMF10000
27miR_Clustering_Consensus10000
28miR_FindDirectTargets10000
29miR_Preprocess10000
30mRNAseq_Clustering_CNMF10000
31mRNAseq_Clustering_Consensus10000
32mRNAseq_Preprocess10000
33mRNA_Clustering_CNMF10000
34mRNA_Clustering_Consensus10000
35mRNA_Preprocess_Median10000
36Mutation_Assessor10000
37Mutation_Significance10000
38Pathway_FindEnrichedGenes10000
39Pathway_Paradigm_Expression10000
40Pathway_Paradigm_Expression_CopyNumber10000
41RPPA_Clustering_CNMF10000
42RPPA_Clustering_Consensus10000
Total380040

This table generated on Mon Oct 1 07:31:11 2012