Broad GDAC Analyses Status
analyses__2012_08_25__sarc_00 Run for Tumor Type: SARC
Tumor
BCR
Clinical
CN
LowP
Methylation
mRNA
mRNAseq
miR
miRseq
RPPA
MAF
SARC
29
0
20
0
0
0
0
0
0
0
0
Note that the links below require Broad internal Firehose login credentials.
Pipeline
NotRunnable
Runnable
InProcess
Successful
Unsuccessful
1
Aggregate_Clusters
1
0
0
0
0
2
Aggregate_Gene_Status
0
0
0
1
0
3
CopyNumber_Clustering_CNMF
1
0
0
0
0
4
CopyNumber_GeneBySample
0
0
0
1
0
5
CopyNumber_Gistic2
0
0
0
1
0
6
CopyNumber_Gistic2_Postprocess_Focal
0
0
0
1
0
7
Correlate_Clinical_vs_CopyNumber_Arm
1
0
0
0
0
8
Correlate_Clinical_vs_CopyNumber_Focal
1
0
0
0
0
9
Correlate_Clinical_vs_Methylation
1
0
0
0
0
10
Correlate_Clinical_vs_miR
1
0
0
0
0
11
Correlate_Clinical_vs_miRseq
1
0
0
0
0
12
Correlate_Clinical_vs_Molecular_Signatures
1
0
0
0
0
13
Correlate_Clinical_vs_mRNA
1
0
0
0
0
14
Correlate_Clinical_vs_mRNAseq
1
0
0
0
0
15
Correlate_Clinical_vs_Mutation
1
0
0
0
0
16
Correlate_Clinical_vs_RPPA
1
0
0
0
0
17
Correlate_CopyNumber_vs_miR
1
0
0
0
0
18
Correlate_CopyNumber_vs_mRNA
1
0
0
0
0
19
Correlate_CopyNumber_vs_mRNAseq
1
0
0
0
0
20
Correlate_Methylation_vs_mRNA
1
0
0
0
0
21
Methylation_Clustering_CNMF
1
0
0
0
0
22
Methylation_Preprocess
1
0
0
0
0
23
miRseq_Clustering_CNMF
1
0
0
0
0
24
miRseq_Clustering_Consensus
1
0
0
0
0
25
miRseq_Preprocess
1
0
0
0
0
26
miR_Clustering_CNMF
1
0
0
0
0
27
miR_Clustering_Consensus
1
0
0
0
0
28
miR_FindDirectTargets
1
0
0
0
0
29
miR_Preprocess
1
0
0
0
0
30
mRNAseq_Clustering_CNMF
1
0
0
0
0
31
mRNAseq_Clustering_Consensus
1
0
0
0
0
32
mRNAseq_Preprocess
1
0
0
0
0
33
mRNA_Clustering_CNMF
1
0
0
0
0
34
mRNA_Clustering_Consensus
1
0
0
0
0
35
mRNA_Preprocess_Median
1
0
0
0
0
36
Mutation_Assessor
1
0
0
0
0
37
Mutation_Significance
1
0
0
0
0
38
Pathway_FindEnrichedGenes
1
0
0
0
0
39
Pathway_Paradigm_Expression
1
0
0
0
0
40
Pathway_Paradigm_Expression_CopyNumber
1
0
0
0
0
41
RPPA_Clustering_CNMF
1
0
0
0
0
42
RPPA_Clustering_Consensus
1
0
0
0
0
Total
38
0
0
4
0
This table generated on Mon Oct 1 07:31:11 2012