index	chromosome	region_start	region_end	peak_start	peak_end	enlarged_peak_start	enlarged_peak_end	n_genes_in_region	genes_in_region	n_genes_in_peak	genes_in_peak	n_genes_on_chip	genes_on_chip	top 3
1	1	149881398	174520502	150120703	150336078	120527361	155971692	297	hsa-mir-555,hsa-mir-92b,hsa-mir-4258,hsa-mir-190b,hsa-mir-554,hsa-mir-4257,hsa-mir-3118-3,hsa-mir-3118-2,hsa-mir-3118-1,ADAR,ARNT,BCL9,CHRNB2,CKS1B,CLK2,CTSK,CTSS,ECM1,EFNA1,EFNA3,EFNA4,ENSA,FCGR1A,FCGR1B,FDPS,FLG,FMO5,GBA,GBAP1,GJA5,GJA8,IL6R,ILF2,IVL,KCNN3,LOR,MCL1,SMCP,MTX1,MUC1,NOTCH2,NPR1,PDZK1,PI4KB,PKLR,PRKAB2,PSMB4,PSMD4,RAB13,RFX5,RIT1,RORC,RPS27,S100A1,S100A2,S100A3,S100A4,S100A5,S100A6,S100A7,S100A8,S100A9,S100A10,S100A11,S100A12,S100A13,SHC1,SPRR1A,SPRR1B,SPRR2A,SPRR2B,SPRR2C,SPRR2D,SPRR2E,SPRR2F,SPRR2G,SPRR3,VPS72,THBS3,TCHH,TPM3,TUFT1,DAP3,HIST2H2AA3,HIST2H2AC,HIST2H2BE,HIST2H4A,PIP5K1A,ANXA9,ITGA10,ADAM15,PEX11B,SELENBP1,PRPF3,ARHGEF2,SEC22B,CHD1L,PDE4DIP,SETDB1,UBAP2L,SV2A,DENND4B,RBM8A,SCAMP3,SF3B4,PIAS3,HAX1,SEMA6C,POLR3C,TXNIP,PMVK,FAM189B,JTB,MTMR11,MLLT11,SLC27A3,TDRKH,CD160,CELF3,VPS45,KIAA0907,POGZ,SYT11,RPRD2,SNAPIN,RUSC1,CA14,NBPF14,C1orf43,CHTOP,LCE2B,SLC39A1,RNF115,TMOD4,CERS2,CRNN,BOLA1,ZBTB7B,APH1A,PLEKHO1,ACP6,GPR89B,OAZ3,DPM3,MRPS21,ADAMTSL4,CRCT1,GON4L,C1orf56,MSTO1,GOLPH3L,YY1AP1,UBE2Q1,FAM63A,ASH1L,LENEP,SLC50A1,CDC42SE1,OTUD7B,PGLYRP4,ATP8B2,FAM91A2,PBXIP1,S100A14,GATAD2B,CGN,ZNF687,HCN3,PRUNE,MRPL9,INTS3,SCNM1,TNFAIP8L2,C1orf54,TRIM46,TARS2,FLAD1,SNX27,ANP32E,HORMAD1,POLR3GL,LCE3D,AQP10,PYGO2,NUP210L,PGLYRP3,GNRHR2,THEM4,GABPB2,TCHHL1,RPTN,TDRD10,SHE,HIST2H3C,DCST2,LIX1L,S100A16,CREB3L4,C1orf51,HFE2,ANKRD35,LELP1,DCST1,BNIPL,SPRR4,PPIAL4A,PDIA3P,LCE4A,NBPF11,NUDT17,KRTCAP2,CRTC2,LCE5A,RIIAD1,THEM5,NBPF15,ANKRD34A,RUSC1-AS1,HIST2H2AB,HIST2H3A,HIST2H2BC,HIST2H2BA,S100A7A,LINGO4,RXFP4,LCE1A,LCE1B,LCE1C,LCE1D,LCE1E,LCE1F,LCE2A,LCE2C,LCE2D,LCE3A,LCE3B,LCE3C,LCE3E,LOC375010,NOTCH2NL,FLJ39739,LOC388692,LYSMD1,HRNR,FLG2,C1orf189,NBPF9,HIST2H2BF,KPRP,LCE6A,HIST2H4B,PRR9,PPIAL4G,PPIAL4D,LOC645166,LOC645676,POU5F1P4,S100A7L2,EMBP1,SRGAP2P2,PPIAL4B,LOC653513,GPR89A,PPIAL4C,HIST2H3D,FAM72B,SCARNA4,SNORA42,MIR554,MIR555,MIR92B,HIST2H2AA4,FAM72D,LOC728855,LOC728875,NBPF24,GPR89C,NBPF16,PDZK1P1,PPIAL4F,LOC728989,PPIAL4E,PFN1P2,MIR190B,C1orf68,MSTO2P,LOC100130000,LOC100132111,NBPF10,FCGR1C,C2CD4D,LOC100286793,LOC100289211,MIR4257,MIR4258,LOC100505666,TNFAIP8L2-SCNM1,	10	PRPF3,VPS45,RPRD2,CA14,APH1A,PLEKHO1,MRPS21,C1orf54,ANP32E,C1orf51,	
2	1	40013483	40424690	40013483	40416849	39754533	40649982	18	BMP8B,MYCL1,PPT1,RLF,PABPC4,PPIE,CAP1,MACF1,HEYL,HPCAL4,TRIT1,OXCT2,NT5C1A,MFSD2A,BMP8A,KIAA0754,SNORA55,PPIEL,	11	BMP8B,MYCL1,PABPC4,PPIE,HEYL,HPCAL4,TRIT1,OXCT2,NT5C1A,SNORA55,PPIEL,	
3	2	45412576	68911381	60669585	60709259	60529659	61154325	5	REL,BCL11A,PAPOLG,FLJ16341,MIR4432,	1	BCL11A,	
4	2	177930304	178285811	178088803	178096260	178085599	178126546	4	hsa-mir-3128,NFE2L2,HNRNPA3,MIR3128,	2	NFE2L2,HNRNPA3,	
5	3	131731426	197538677	181495612	181680734	181227787	183897845	22	AP2M1,DVL3,SOX2,EIF2B5,ABCC5,MCF2L2,ATP11B,LAMP3,DCUN1D1,KLHL24,PARL,YEATS2,MCCC1,MAP6D1,B3GNT5,KLHL6,HTR3C,HTR3D,HTR3E,SOX2-OT,FLJ46066,LOC100505687,	0	[SOX2-OT]	
6	3	89987785	90218357	90115197	90136303	89653284	90218357	0	[EPHA3]	0	[EPHA3]	
7	4	52698757	61184428	56452318	56504097	56242076	56528306	5	CLOCK,NMU,TMEM165,PDCL2,LOC100506462,	2	NMU,PDCL2,	
8	5	914233	50133376	2188576	2303782	914233	4421160	38	hsa-mir-4277,NDUFS6,SDHA,SLC6A3,SLC9A3,TERT,TRIP13,PDCD6,SLC12A7,TPPP,EXOC3,PP7080,IRX4,CEP72,AHRR,MRPL36,BRD9,IRX1,ZDHHC11,LPCAT1,CLPTM1L,NKD2,C5orf55,CCDC127,PLEKHG4B,C5orf38,IRX2,LOC285577,SLC6A19,SLC6A18,LRRC14B,SDHAP3,LOC728613,MIR4277,LOC100506688,MIR4457,MIR4456,MIR4635,	0	[IRX4]	
9	5	914233	50133376	45378456	45378456	30231951	50124856	89	hsa-mir-1274a,hsa-mir-580,hsa-mir-579,hsa-mir-4279,C6,C7,C9,CDH6,DAB2,FGF10,FYB,GDNF,GHR,HMGCS1,IL7R,LIFR,NPR3,OXCT1,PRKAA1,PRLR,PTGER4,RAD1,RPL37,SEPP1,SKP2,SLC1A3,TARS,ZNF131,OSMR,NUP155,PAIP1,MRPS30,SUB1,PDZD2,NNT,TTC33,AMACR,NIPBL,RAI14,FBXO4,DROSHA,SLC45A2,RXFP3,ZFR,MTMR12,WDR70,BRIX1,C5orf22,CCL28,GOLPH3,C5orf28,AGXT2,C5orf42,PARP8,SPEF2,ADAMTS12,CARD6,LMBRD2,C1QTNF3,EMB,HEATR7B2,EGFLAM,NADKD1,UGT3A1,CAPSL,DNAJC21,TTC23L,LOC153684,UGT3A2,NIM1,RANBP3L,RICTOR,C5orf51,LOC340113,PLCXD3,HCN1,C5orf34,C5orf39,SNORD72,LOC646719,LOC648987,MIR580,CCDC152,LOC100132356,MIR4279,MIR3650,LOC100506548,C1QTNF3-AMACR,EGFLAM-AS4,	3	PARP8,EMB,HCN1,	
10	6	63670225	66483825	65749649	65821993	63668386	66481893	4	PTP4A1,PHF3,LGSN,EYS,	1	EYS,	
11	7	53046223	57923947	55603625	55603625	54767699	55793010	5	EGFR,SEC61G,LANCL2,VOPP1,FKBP9L,	1	VOPP1,	
12	7	91490746	93551606	92339881	92385523	91476770	93546068	25	hsa-mir-489,hsa-mir-1285-1,CALCR,KRIT1,CDK6,CYP51A1,GNGT1,PEX1,MTERF,TFPI2,AKAP9,ANKIB1,SAMD9,CCDC132,GATAD1,RBM48,MGC16142,SAMD9L,HEPACAM2,FAM133B,LRRD1,MIR489,MIR653,LOC728066,MIR4652,	1	CDK6,	
13	8	35318439	47465443	38185323	38247106	38171486	38254058	2	WHSC1L1,LETM2,	2	WHSC1L1,LETM2,	
14	8	98198847	145232496	128396142	128416679	128343452	128623688	2	POU5F1B,LOC727677,	0	[POU5F1B]	
15	9	31911226	37089469	34963884	35044493	34198058	35919468	56	NUDT2,CA9,CD72,CNTFR,FANCG,GALT,IL11RA,NPR2,RMRP,CCL19,CCL21,TESK1,TLN1,TPM2,VCP,RGP1,RUSC2,SIGMAR1,CREB3,UNC13B,CCL27,DCTN3,KIAA1045,DNAJB5,SPAG8,DNAI1,SIT1,STOML2,UBAP1,TMEM8B,KIAA1161,GBA2,FAM214B,HINT2,C9orf24,PIGO,C9orf100,FP588,ARID3C,C9orf23,C9orf131,LOC158376,ATP8B5P,C9orf25,CCDC107,FAM205A,KIF24,ENHO,FAM205B,C9orf128,OR13J1,LOC415056,HRCT1,MSMP,FAM166B,MIR4667,	3	KIAA1045,DNAJB5,C9orf131,	
16	9	5341593	5719212	5564748	5586956	5423103	5591850	3	CD274,C9orf46,PDCD1LG2,	3	CD274,C9orf46,PDCD1LG2,	
17	11	68429687	71523318	69898247	69901274	69617844	70248734	7	hsa-mir-548k,CTTN,FGF3,PPFIA1,FADD,ANO1,MIR548K,	0	[ANO1]	
18	12	889902	3615077	1862158	1866204	889902	3469259	34	CACNA1C,FKBP4,FOXM1,NINJ2,RAD52,KDM5A,SLC6A12,SLC6A13,TEAD4,TULP3,TSPAN9,ERC1,ITFG2,WNK1,ADIPOR2,WNT5B,C12orf32,NRIP2,CCDC77,CACNA2D4,FBXL14,DCP1B,B4GALNT3,LOC283440,IQSEC3,LOC574538,LRTM2,FAM138D,LOC100271702,LOC100288778,LOC100292680,MIR3649,LOC100507424,LOC100652846,	1	ADIPOR2,	
19	12	67147614	71115556	69728786	69859478	67138317	71502598	29	hsa-mir-1279,CPM,IFNG,LYZ,MDM2,CNOT2,PTPRB,PTPRR,RAP1B,YEATS4,DYRK2,CCT2,FRS2,CPSF6,KCNMB4,IL22,SLC35E3,IL26,CAND1,MDM1,NUP107,RAB3IP,BEST3,LRRC10,MIR1279,SNORA70G,MIR3913-2,MIR3913-1,LOC100507250,	3	LYZ,YEATS4,FRS2,	
20	14	36235142	38272445	37076405	37151212	36783262	37615271	7	PAX9,NKX2-1,NKX2-8,MBIP,SLC25A21,SFTA3,MIR4503,	2	PAX9,SLC25A21,	
21	15	93546312	101884307	100987932	101363341	89856251	101884307	93	hsa-mir-1302-10,hsa-mir-1469,hsa-mir-3175,hsa-mir-3174,hsa-mir-9-3,ALDH1A3,ANPEP,BLM,CHD2,FES,IDH2,IGF1R,MAN2A2,MEF2A,FURIN,PCSK6,PLIN1,POLG,SNRPA1,NR2F2,ST8SIA2,PEX11A,IQGAP1,PRC1,SV2B,AP3S2,SEMA4B,CIB1,CHSY1,SYNM,GABARAPL3,VPS33B,OR4F4,SLCO3A1,NGRN,RHCG,LINS,FANCI,MCTP2,SELS,MESP1,UNC45A,RGMA,WDR93,CRTC3,TTC23,LRRK1,TM2D3,C15orf42,RCCD1,ARRDC4,LOC91948,TARSL2,LRRC28,ASB7,LYSMD4,PGPEP1L,LOC145820,C15orf32,MESP2,SPATA8,ADAMTS17,DNM1P46,CERS3,LOC254559,LOC283761,FAM169B,ZNF774,C15orf38,KIF7,ZNF710,HDDC3,WASH3P,FLJ42289,C15orf58,OR4F6,OR4F15,FAM174B,LOC400456,MIR9-3,TTLL13,ASB9P1,FAM138E,LOC100144604,GPCRLTM7,DDX11L1,DDX11L9,MIR1469,MIR3175,LOC100507217,LOC100507472,C15orf38-AP3S2,MIR4714,	3	LINS,ASB7,CERS3,	
22	17	70521595	75109300	71270468	71280722	70569542	74429113	93	ACOX1,CDK3,EVPL,FDXR,FOXJ1,GALK1,GRB2,GRIN2C,H3F3B,ICT1,ITGB4,LLGL2,PRPSAP1,RPL38,SUMO2,SRP68,SSTR2,GALR2,SPHK1,SLC16A5,SLC9A3R1,COG1,RECQL5,KIAA0195,ATP5H,CD300C,CD300A,GGA3,EXOC7,KCTD2,WBP2,CDC42EP4,NAT9,SAP30BP,NT5C,CDR2L,MRPS7,HN1,SDK2,TMEM104,C17orf80,GPRC5C,MIF4GD,CASKIN2,SLC25A19,UBE2O,DNAI2,MRPL38,ARMC7,NUP85,MYO15B,QRICH2,FAM104A,MGC16275,FBF1,UNK,TRIM47,OTOP2,TTYH2,RNF157,USH1G,CD300LB,KIF19,CD300LF,C17orf77,SLC39A11,TRIM65,UNC13D,LINC00469,FADS6,C17orf28,TSEN54,FAM100B,RAB37,CD300E,OTOP3,GPR142,ZACN,BTBD17,LINC00511,LOC400620,CPSF4L,C17orf109,C17orf110,CD300LD,TEN1,LOC100287042,LOC100499467,MIR3678,MIR3615,LOC100507218,TEN1-CDK3,MIR4738,	1	CDC42EP4,	
23	18	19876381	25024008	23827285	23889460	23753888	24410937	4	TAF4B,PSMA8,KCTD1,LOC728606,	1	TAF4B,	
24	18	329586	894562	365815	367119	329586	893522	10	CETN1,TYMS,YES1,USP14,THOC1,CLUL1,ENOSF1,COLEC12,C18orf56,ROCK1P1,	7	CETN1,TYMS,YES1,CLUL1,ENOSF1,COLEC12,C18orf56,	
25	19	28240494	41612462	39837455	39850028	39592332	40024295	21	RPS16,SUPT5H,ZFP36,GMFG,PAK4,DLL3,PAF1,SAMD4B,MED29,LRFN1,PLEKHG2,TIMM50,EID2B,IL28A,IL28B,IL29,NCCRP1,SYCN,SELV,PAPL,MIR4530,	1	SAMD4B,	
26	19	28240494	41612462	29379723	29393791	28698181	30002390	4	UQCRFS1,LOC148145,LOC284395,LOC100505835,	0	[LOC148145]	
27	20	29843973	31356768	30203029	30218942	26197899	30578467	26	hsa-mir-3193,BCL2L1,FOXS1,ID1,TPX2,REM1,HM13,PDRG1,COX4I2,MYLK2,DEFB118,DUSP15,MLLT10P1,LINC00028,TTLL9,DEFB115,DEFB116,DEFB119,DEFB121,DEFB122,DEFB123,DEFB124,FRG1B,XKR7,PSIMCT-1,MIR3193,	0	[MIR3193]	
28	21	18487012	18511448	18487012	18499013	17522559	20408138	15	hsa-mir-548x,hsa-mir-125b-2,hsa-let-7c,CXADR,TMPRSS15,BTG3,CHODL-AS1,C21orf91,CHODL,C21orf91-OT1,LINC00478,MIRLET7C,MIR125B2,MIR99A,C21orf37,	0	[C21orf37]	
29	22	22096802	23817240	22159805	22210263	18613737	23816388	110	hsa-mir-650,hsa-mir-130b,hsa-mir-649,hsa-mir-1286,hsa-mir-1306,hsa-mir-185,ARVCF,BCR,COMT,CRKL,GGT3P,GNAZ,GP1BB,GSC2,SERPIND1,PI4KA,SEPT5,MAPK1,PRODH,RANBP1,SLC7A4,SLC25A1,TBX1,CLDN5,HIRA,UBE2L3,UFD1L,VPREB1,ZNF74,DGCR6,LZTR1,CLTCL1,DGCR14,CDC45,TOP3B,P2RX6,SNAP29,RAB36,PPM1F,DGCR2,TXNRD2,USP18,HIC2,PRAME,TSSK2,SDF2L1,PPIL2,DGCR11,DGCR9,POM121L1P,DGCR5,DGCR10,FBXW4P1,TRMT2A,RTDR1,POM121L8P,YPEL1,ZDHHC8,MED15,TUBA8,DGCR8,GNB1L,MRPL40,RTN4R,C22orf29,THAP7,TMEM191A,KLHL22,DGCR6L,RIMBP3,SCARF2,GGTLC2,LOC96610,MGC16703,C22orf39,C22orf25,ZNF280A,ZNF280B,LOC150185,LOC150197,AIFM3,RIMBP3C,YDJC,ZDHHC8P1,CCDC116,POM121L4P,LOC284865,PI4KAP2,LOC388849,LOC400891,BCRP2,MIR130B,MIR185,THAP7-AS1,P2RX6P,RIMBP3B,TMEM191C,LOC648691,CES5AP1,MIR650,TMEM191B,PI4KAP1,LOC729444,MIR301B,MIR1286,MIR1306,IGLL5,MIR3618,SEPT5-GP1BB,MIR4761,	1	MAPK1,	
