Clinical Features	Time to Death		AGE		GENDER		KARNOFSKY.PERFORMANCE.SCORE		RADIATIONS.RADIATION.REGIMENINDICATION		NEOADJUVANT.THERAPY	
	nCNV (%)	nWild-Type	logrank test_P	logrank test_Q	t-test_P	t-test_Q	Fisher's exact test_P	Fisher's exact test_Q	t-test_P	t-test_Q	Fisher's exact test_P	Fisher's exact test_Q	Fisher's exact test_P	Fisher's exact test_Q
Amp Peak  1(1p36.21)	87 (16%)	457	0.086146	1	0.3164	1	0.28312	1	0.65288	1	0.61815	1	0.81498	1
Amp Peak  2(1q32.1)	148 (27%)	396	0.37321	1	0.2963	1	0.62369	1	0.27935	1	0.68006	1	0.92347	1
Amp Peak  3(1q44)	96 (18%)	448	0.50342	1	0.92944	1	0.35944	1	0.63312	1	0.8102	1	0.82209	1
Amp Peak  4(2p24.3)	44 (8%)	500	0.15066	1	0.268	1	0.42393	1	0.58252	1	1	1	0.11815	1
Amp Peak  5(3q26.33)	105 (19%)	439	0.28565	1	0.029574	1	0.82425	1	0.68765	1	0.35268	1	1	1
Amp Peak  6(4p16.3)	45 (8%)	499	0.55391	1	0.53898	1	0.52551	1	0.42926	1	0.094348	1	0.21232	1
Amp Peak  7(4q12)	103 (19%)	441	0.61892	1	0.53225	1	0.21932	1	0.59707	1	0.29167	1	0.44323	1
Amp Peak  8(7p11.2)	478 (88%)	66	2.5716e-06	0.00113	5.9526e-09	2.64e-06	0.5021	1	0.035121	1	0.023932	1	0.51362	1
Amp Peak  9(7q11.21)	439 (81%)	105	0.00015223	0.0656	8.0474e-08	3.55e-05	0.22397	1	0.65765	1	0.026819	1	0.51643	1
Amp Peak 10(7q21.2)	454 (83%)	90	0.00063398	0.272	4.217e-06	0.00184	0.63706	1	0.48966	1	0.063346	1	0.35692	1
Amp Peak 11(7q31.2)	446 (82%)	98	0.024631	1	0.0014563	0.623	0.36179	1	0.51349	1	0.023436	1	0.26423	1
Amp Peak 12(8q24.21)	62 (11%)	482	0.35109	1	0.16469	1	0.21768	1	0.60158	1	0.77371	1	0.68825	1
Amp Peak 13(11p13)	26 (5%)	518	0.86686	1	0.30796	1	0.53931	1	0.29597	1	0.3921	1	1	1
Amp Peak 14(12p13.32)	78 (14%)	466	0.83883	1	0.14489	1	0.90069	1	0.69516	1	0.79499	1	0.7136	1
Amp Peak 15(12q14.1)	127 (23%)	417	0.12548	1	0.86983	1	0.46838	1	0.80807	1	0.66494	1	0.91955	1
Amp Peak 16(12q15)	87 (16%)	457	0.94517	1	0.69729	1	0.33892	1	0.911	1	0.13498	1	0.2941	1
Amp Peak 17(13q34)	30 (6%)	514	0.82771	1	0.84729	1	0.3383	1	0.83767	1	1	1	1	1
Amp Peak 18(14q32.33)	31 (6%)	513	0.067578	1	0.0049285	1	0.45299	1	0.25424	1	1	1	0.85412	1
Amp Peak 19(17p13.2)	47 (9%)	497	0.57258	1	0.87114	1	0.16363	1	0.16543	1	0.41395	1	0.047567	1
Amp Peak 20(17q25.1)	75 (14%)	469	0.060011	1	0.029978	1	0.25463	1	0.83741	1	0.68976	1	0.53501	1
Amp Peak 21(19p13.2)	231 (42%)	313	0.14253	1	0.65807	1	0.85931	1	0.44143	1	0.85284	1	0.86261	1
Amp Peak 22(19q12)	196 (36%)	348	0.33323	1	0.39701	1	0.649	1	0.99565	1	0.8491	1	0.32612	1
Amp Peak 23(21q21.1)	62 (11%)	482	0.58185	1	0.012513	1	0.68122	1	0.54875	1	0.56525	1	0.68825	1
Del Peak  1(1p36.32)	97 (18%)	447	0.444	1	0.61498	1	0.066566	1	0.98543	1	1	1	0.73687	1
Del Peak  2(1p36.23)	132 (24%)	412	0.9123	1	0.012167	1	0.014044	1	0.19279	1	0.74894	1	0.10977	1
Del Peak  3(1p32.3)	59 (11%)	485	0.76087	1	0.060048	1	0.15867	1	0.68683	1	0.078575	1	1	1
Del Peak  4(1p22.1)	46 (8%)	498	0.27227	1	0.32143	1	1	1	0.58494	1	1	1	0.54037	1
Del Peak  5(1q42.11)	45 (8%)	499	0.087051	1	0.060739	1	1	1	0.010213	1	0.13667	1	0.27919	1
Del Peak  6(1q44)	31 (6%)	513	0.3005	1	0.28623	1	0.85054	1	0.066915	1	0.69471	1	0.85412	1
Del Peak  7(2q22.1)	43 (8%)	501	0.31088	1	0.09405	1	0.19777	1	0.68554	1	0.17435	1	0.43147	1
Del Peak  8(2q37.1)	55 (10%)	489	0.76012	1	0.34461	1	0.14591	1	0.65713	1	0.361	1	1	1
Del Peak  9(3p21.1)	52 (10%)	492	0.02373	1	0.011865	1	0.88271	1	0.69778	1	0.085987	1	0.18966	1
Del Peak 10(3q13.31)	55 (10%)	489	0.52836	1	0.062991	1	0.38349	1	0.30584	1	0.28969	1	0.57103	1
Del Peak 11(3q22.1)	55 (10%)	489	0.65575	1	0.13646	1	1	1	0.48995	1	0.28969	1	0.77704	1
Del Peak 12(3q29)	62 (11%)	482	0.25984	1	0.19383	1	0.89109	1	0.45867	1	0.19329	1	0.34874	1
Del Peak 13(4p16.3)	79 (15%)	465	0.40503	1	0.074671	1	0.21444	1	0.14593	1	0.60295	1	0.46508	1
Del Peak 14(4q34.3)	89 (16%)	455	0.16523	1	0.094413	1	0.058084	1	0.65979	1	0.17421	1	0.24603	1
Del Peak 15(5q35.2)	54 (10%)	490	0.035471	1	0.1185	1	0.77008	1	0.36712	1	0.5406	1	0.66827	1
Del Peak 16(6q22.31)	153 (28%)	391	0.035857	1	0.26787	1	0.064807	1	0.45388	1	0.75961	1	0.56764	1
Del Peak 17(6q26)	172 (32%)	372	0.18757	1	0.73423	1	0.13271	1	0.70203	1	0.69337	1	0.85392	1
Del Peak 18(8p23.2)	65 (12%)	479	0.18114	1	0.044054	1	0.58909	1	0.6344	1	0.48005	1	0.43037	1
Del Peak 19(8q24.3)	57 (10%)	487	0.86599	1	0.65859	1	0.88718	1	0.36625	1	0.5505	1	0.48398	1
Del Peak 20(9p21.3)	399 (73%)	145	0.022331	1	0.00015591	0.067	0.55235	1	0.092612	1	0.25511	1	0.84675	1
Del Peak 21(9q34.2)	71 (13%)	473	0.52867	1	0.99946	1	1	1	0.64447	1	0.89204	1	0.20362	1
Del Peak 22(10p15.3)	446 (82%)	98	1.2409e-05	0.00539	3.1202e-08	1.38e-05	0.067907	1	0.61451	1	0.042939	1	0.82342	1
Del Peak 23(10p13)	447 (82%)	97	6.6992e-06	0.00291	2.1193e-07	9.32e-05	0.029721	1	0.88366	1	0.1511	1	0.91083	1
Del Peak 24(10p11.23)	451 (83%)	93	9.1366e-07	0.000401	1.1575e-08	5.13e-06	0.10313	1	0.23232	1	0.17977	1	0.90944	1
Del Peak 25(10q23.31)	486 (89%)	58	2.2728e-05	0.00984	2.714e-06	0.00119	0.57195	1	0.07507	1	0.30156	1	0.7812	1
Del Peak 26(10q26.3)	486 (89%)	58	0.0018893	0.807	2.8909e-05	0.0125	0.57195	1	0.11779	1	0.65883	1	0.57844	1
Del Peak 27(11p15.5)	127 (23%)	417	0.063421	1	0.012509	1	0.12001	1	0.24245	1	0.66494	1	0.61352	1
Del Peak 28(11p11.2)	100 (18%)	444	0.08945	1	0.67136	1	0.11264	1	0.79634	1	0.40697	1	0.91216	1
Del Peak 29(11q14.1)	94 (17%)	450	0.81837	1	0.78097	1	0.20198	1	0.5375	1	0.021048	1	0.17352	1
Del Peak 30(12p13.1)	75 (14%)	469	0.4396	1	0.90953	1	0.4456	1	0.82532	1	0.79196	1	0.90129	1
Del Peak 31(12q12)	75 (14%)	469	0.71799	1	0.711	1	0.79938	1	0.81013	1	0.35132	1	0.70979	1
Del Peak 32(12q15)	75 (14%)	469	0.58655	1	0.86085	1	0.30898	1	0.18554	1	0.35132	1	1	1
Del Peak 33(13q12.11)	177 (33%)	367	0.94589	1	0.84713	1	0.77896	1	0.85465	1	0.24122	1	0.16978	1
Del Peak 34(13q14.2)	230 (42%)	314	0.58561	1	0.53817	1	0.9293	1	0.82821	1	0.35474	1	0.055821	1
Del Peak 35(14q13.1)	173 (32%)	371	0.74133	1	0.48769	1	0.15869	1	0.26987	1	0.69357	1	0.35687	1
Del Peak 36(14q24.2)	169 (31%)	375	0.92899	1	0.49734	1	0.34398	1	0.60491	1	0.92116	1	0.13768	1
Del Peak 37(15q14)	146 (27%)	398	0.44597	1	0.067245	1	0.76716	1	0.82577	1	0.14854	1	0.081027	1
Del Peak 38(16p12.2)	90 (17%)	454	0.28518	1	0.26174	1	0.29114	1	0.80795	1	0.80563	1	0.81793	1
Del Peak 39(16q23.3)	94 (17%)	450	0.18445	1	0.95589	1	0.41706	1	0.26569	1	0.039	1	0.73399	1
Del Peak 40(17p13.2)	81 (15%)	463	0.60106	1	0.55352	1	0.22097	1	0.18894	1	0.60852	1	0.54913	1
Del Peak 41(17p13.1)	91 (17%)	453	0.82573	1	0.18338	1	0.061288	1	0.79726	1	0.11009	1	0.90873	1
Del Peak 42(17q11.2)	67 (12%)	477	0.60485	1	0.58282	1	1	1	0.24547	1	0.049774	1	0.79508	1
Del Peak 43(18q22.3)	79 (15%)	465	0.99921	1	0.38259	1	0.80428	1	0.12773	1	0.69692	1	0.62633	1
Del Peak 44(19q13.41)	99 (18%)	445	0.080843	1	0.51727	1	0.90957	1	0.26366	1	0.47627	1	0.31689	1
Del Peak 45(21q22.3)	60 (11%)	484	0.96113	1	0.15357	1	0.26308	1	0.29565	1	1	1	0.41122	1
Del Peak 46(22q12.2)	188 (35%)	356	0.84207	1	0.14185	1	0.92664	1	0.39736	1	0.77299	1	0.85678	1
Del Peak 47(22q13.31)	204 (38%)	340	0.97629	1	0.25479	1	0.71723	1	0.22305	1	0.56963	1	0.24915	1
Del Peak 48(22q13.31)	203 (37%)	341	0.96396	1	0.25198	1	0.92783	1	0.21066	1	0.50715	1	0.59455	1
Del Peak 49(22q13.32)	207 (38%)	337	0.73473	1	0.2674	1	0.71832	1	0.59856	1	0.57071	1	0.47946	1
Del Peak 50(Xp22.2)	124 (23%)	420	0.35893	1	0.49825	1	0.75394	1	0.82496	1	1	1	0.47394	1
Del Peak 51(Xq23)	119 (22%)	425	0.23428	1	0.8321	1	0.91557	1	0.55263	1	0.65786	1	0.21289	1