Clinical Features Time to Death AGE GENDER KARNOFSKY.PERFORMANCE.SCORE PATHOLOGY.T PATHOLOGY.N PATHOLOGICSPREAD(M) TUMOR.STAGE NEOADJUVANT.THERAPY nCNV (%) nWild-Type logrank test_P logrank test_Q t-test_P t-test_Q Fisher's exact test_P Fisher's exact test_Q t-test_P t-test_Q Fisher's exact test_P Fisher's exact test_Q Fisher's exact test_P Fisher's exact test_Q Fisher's exact test_P Fisher's exact test_Q Fisher's exact test_P Fisher's exact test_Q Fisher's exact test_P Fisher's exact test_Q Amp Peak 1(1q24.1) 60 (12%) 430 0.20739 1 0.17723 1 0.66507 1 0.49947 1 0.16373 1 0.07619 1 0.34001 1 0.3212 1 0.48106 1 Amp Peak 2(1q32.1) 59 (12%) 431 0.44805 1 0.079778 1 0.77104 1 0.49947 1 0.17611 1 0.70954 1 0.70413 1 0.25702 1 0.47497 1 Amp Peak 3(3q26.32) 78 (16%) 412 0.14246 1 0.66229 1 0.36484 1 0.15249 1 3.8619e-05 0.00958 0.05692 1 5.2665e-05 0.013 8.4802e-06 0.00213 0.18124 1 Amp Peak 4(4q32.1) 14 (3%) 476 0.060535 1 0.40378 1 0.26017 1 0.41127 1 0.24177 1 0.57588 1 0.46437 1 0.4172 1 1 1 Amp Peak 5(5q35.1) 309 (63%) 181 0.040575 1 0.071365 1 0.14084 1 0.94418 1 0.29158 1 0.31106 1 0.30468 1 0.62372 1 0.65604 1 Amp Peak 6(7q36.3) 162 (33%) 328 0.64784 1 0.76602 1 0.03489 1 0.5695 1 0.055284 1 0.4416 1 0.0051988 1 0.019607 1 0.33788 1 Amp Peak 7(8q24.22) 72 (15%) 418 0.031427 1 0.013126 1 0.10951 1 0.29715 1 0.0006839 0.163 0.73419 1 0.051373 1 0.0015879 0.368 1 1 Amp Peak 8(10p14) 15 (3%) 475 0.083372 1 0.15643 1 0.59166 1 0.88715 1 0.0057905 1 0.16146 1 0.26725 1 0.027644 1 0.14453 1 Amp Peak 9(17q24.3) 37 (8%) 453 0.053646 1 0.071359 1 0.85826 1 0.47135 1 0.50062 1 0.36061 1 0.24312 1 0.8677 1 0.32581 1 Amp Peak 10(Xp22.2) 34 (7%) 456 0.31872 1 0.8466 1 0.71059 1 0.72551 1 0.055479 1 0.65784 1 0.083121 1 0.0065062 1 0.040973 1 Amp Peak 11(Xp11.4) 35 (7%) 455 0.57563 1 0.88732 1 0.85428 1 0.72551 1 0.044762 1 0.65784 1 0.047829 1 0.0031492 0.718 0.043273 1 Del Peak 1(1p36.23) 97 (20%) 393 0.033607 1 0.096179 1 0.12198 1 0.28439 1 0.10434 1 1 1 0.083589 1 0.15696 1 0.055428 1 Del Peak 2(1p31.1) 72 (15%) 418 0.22757 1 0.08128 1 0.015737 1 0.28439 1 0.053169 1 0.72276 1 0.37708 1 0.18289 1 0.1584 1 Del Peak 3(1q43) 38 (8%) 452 0.69279 1 0.35404 1 1 1 NA NA 0.066148 1 0.37406 1 1 1 0.75053 1 1 1 Del Peak 4(2q37.3) 48 (10%) 442 0.6611 1 0.65777 1 0.15218 1 NA NA 0.84898 1 1 1 0.40218 1 0.55231 1 1 1 Del Peak 5(3p25.3) 430 (88%) 60 0.70047 1 0.84787 1 0.66507 1 0.081656 1 0.0014542 0.339 1 1 0.70692 1 0.013554 1 0.48106 1 Del Peak 6(3p24.3) 431 (88%) 59 0.49354 1 0.87894 1 0.56042 1 0.081656 1 0.0015893 0.368 1 1 0.84785 1 0.01517 1 0.47497 1 Del Peak 7(3p12.2) 282 (58%) 208 0.56275 1 0.77017 1 0.0021144 0.484 0.74097 1 0.21114 1 0.62656 1 0.5287 1 0.22848 1 0.65481 1 Del Peak 8(3q11.2) 150 (31%) 340 0.65824 1 0.013687 1 1.183e-07 3.04e-05 0.74918 1 0.12985 1 0.78669 1 0.58994 1 0.45416 1 1 1 Del Peak 9(4q34.3) 76 (16%) 414 0.000608 0.145 0.60446 1 0.43229 1 0.026091 1 4.4928e-07 0.000115 1 1 0.008795 1 3.1293e-06 0.000792 0.57107 1 Del Peak 10(6q26) 142 (29%) 348 0.54019 1 0.32365 1 0.0090517 1 0.25573 1 0.66882 1 0.019781 1 0.4121 1 0.35255 1 0.6302 1 Del Peak 11(6q26) 142 (29%) 348 0.56304 1 0.25662 1 0.0047836 1 0.25573 1 0.66882 1 0.019781 1 0.4121 1 0.35255 1 1 1 Del Peak 12(8p23.2) 145 (30%) 345 0.027913 1 0.12083 1 0.25528 1 0.89335 1 0.1694 1 0.78648 1 0.054846 1 0.13467 1 1 1 Del Peak 13(9p23) 144 (29%) 346 0.00015683 0.0381 0.016874 1 0.003495 0.793 0.65618 1 1.8555e-05 0.00462 0.26246 1 0.00090766 0.215 7.6902e-06 0.00194 0.63357 1 Del Peak 14(9p21.3) 152 (31%) 338 2.4055e-06 0.000611 0.032123 1 0.0010244 0.241 0.65618 1 1.3864e-07 3.55e-05 0.059644 1 7.1943e-05 0.0176 4.7619e-08 1.23e-05 0.64791 1 Del Peak 15(10q23.31) 90 (18%) 400 0.22689 1 0.23158 1 0.027137 1 0.76445 1 0.00054496 0.131 1 1 0.33511 1 0.020712 1 0.58996 1 Del Peak 16(13q13.3) 76 (16%) 414 0.00092522 0.218 0.92317 1 0.79362 1 0.74811 1 1.5017e-05 0.00375 0.48955 1 0.038703 1 0.00037026 0.0892 1 1 Del Peak 17(14q31.1) 218 (44%) 272 0.0020526 0.472 0.069704 1 0.34196 1 0.087172 1 0.00017063 0.0413 0.00011871 0.029 0.0010644 0.249 3.9704e-05 0.00981 0.17679 1 Del Peak 18(Xq23) 55 (11%) 435 0.29584 1 0.70369 1 0.23212 1 NA NA 0.309 1 0.65784 1 0.16982 1 0.14069 1 0.099123 1