Clinical Features	Time to Death		AGE		GENDER		KARNOFSKY.PERFORMANCE.SCORE		PATHOLOGY.T		PATHOLOGY.N		PATHOLOGICSPREAD(M)		TUMOR.STAGE		NEOADJUVANT.THERAPY	
	nCNV (%)	nWild-Type	logrank test_P	logrank test_Q	t-test_P	t-test_Q	Fisher's exact test_P	Fisher's exact test_Q	t-test_P	t-test_Q	Fisher's exact test_P	Fisher's exact test_Q	Fisher's exact test_P	Fisher's exact test_Q	Fisher's exact test_P	Fisher's exact test_Q	Fisher's exact test_P	Fisher's exact test_Q	Fisher's exact test_P	Fisher's exact test_Q
1p gain	6 (1%)	484	0.16238	1	0.64095	1	0.42521	1	NA	NA	0.28886	1	0.20539	1	1	1	0.22179	1	1	1
1q gain	34 (7%)	456	0.97296	1	0.090428	1	0.57783	1	0.11501	1	0.093979	1	0.36061	1	1	1	0.10495	1	0.30309	1
2p gain	47 (10%)	443	0.71931	1	0.089473	1	0.14937	1	0.56341	1	0.70422	1	1	1	0.20522	1	0.27756	1	1	1
2q gain	48 (10%)	442	0.52201	1	0.14096	1	0.025437	1	0.15861	1	0.84262	1	1	1	0.20618	1	0.37275	1	1	1
3p gain	7 (1%)	483	0.94481	1	0.42126	1	0.24506	1	NA	NA	0.45636	1	0.26449	1	0.2975	1	0.12174	1	0.069694	1
3q gain	26 (5%)	464	0.76537	1	0.84639	1	1	1	0.026091	1	0.17837	1	0.33205	1	0.15723	1	0.21824	1	0.024553	1
4p gain	8 (2%)	482	0.23962	1	0.86016	1	0.71935	1	NA	NA	0.35744	1	0.37047	1	0.61617	1	0.090425	1	1	1
4q gain	8 (2%)	482	0.6607	1	0.37999	1	1	1	NA	NA	0.56214	1	0.37047	1	0.61617	1	0.21489	1	1	1
5p gain	141 (29%)	349	0.19874	1	0.00010533	0.0638	0.14344	1	0.56341	1	0.16867	1	1	1	0.78329	1	0.21522	1	0.62854	1
5q gain	155 (32%)	335	0.34128	1	0.00027258	0.165	0.15507	1	0.48237	1	0.20588	1	0.61608	1	0.59397	1	0.39356	1	0.65359	1
6p gain	6 (1%)	484	0.22867	1	0.23112	1	1	1	NA	NA	0.66405	1	1	1	1	1	0.75741	1	1	1
6q gain	5 (1%)	485	0.1869	1	0.43558	1	0.66222	1	NA	NA	0.40737	1	1	1	0.57107	1	0.37116	1	1	1
7p gain	126 (26%)	364	0.77274	1	0.27516	1	0.10358	1	0.89259	1	0.2527	1	0.60006	1	0.044789	1	0.16852	1	0.60693	1
7q gain	128 (26%)	362	0.44353	1	0.33841	1	0.067021	1	0.69945	1	0.10639	1	1	1	0.0065312	1	0.042928	1	0.11461	1
8p gain	14 (3%)	476	0.56935	1	0.74536	1	0.041812	1	0.75713	1	0.0070719	1	1	1	0.46437	1	0.0029611	1	1	1
8q gain	33 (7%)	457	0.64135	1	0.29339	1	0.25597	1	0.47135	1	0.0028287	1	0.6475	1	1	1	0.0014902	0.894	1	1
9p gain	8 (2%)	482	0.122	1	0.035604	1	0.02398	1	NA	NA	0.61502	1	1	1	0.61617	1	0.38094	1	1	1
9q gain	8 (2%)	482	0.77243	1	0.95871	1	0.45862	1	NA	NA	0.0078006	1	1	1	0.35924	1	0.11323	1	1	1
10p gain	5 (1%)	485	0.14305	1	0.13676	1	0.34829	1	NA	NA	0.34813	1	1	1	0.17353	1	0.18794	1	0.050191	1
10q gain	4 (1%)	486	0.51683	1	0.17121	1	0.12458	1	NA	NA	0.64874	1	1	1	0.49156	1	0.37988	1	0.040318	1
11p gain	17 (3%)	473	0.9684	1	0.81828	1	0.60947	1	0.11501	1	0.021904	1	1	1	0.16076	1	0.020886	1	0.16246	1
11q gain	15 (3%)	475	0.31402	1	0.79295	1	0.41019	1	NA	NA	0.073989	1	1	1	0.71394	1	0.046524	1	0.14453	1
12p gain	77 (16%)	413	0.075971	1	0.082653	1	0.36267	1	0.40443	1	0.035311	1	1	1	0.088089	1	0.025851	1	0.17737	1
12q gain	77 (16%)	413	0.099454	1	0.12493	1	0.36267	1	0.40443	1	0.035311	1	0.74705	1	0.088089	1	0.025851	1	0.17737	1
13q gain	14 (3%)	476	0.28923	1	0.83605	1	0.77913	1	NA	NA	0.323	1	1	1	1	1	0.25031	1	0.0072284	1
14q gain	5 (1%)	485	0.44422	1	0.51722	1	1	1	NA	NA	0.022066	1	1	1	0.57107	1	0.13287	1	1	1
15q gain	14 (3%)	476	0.85855	1	0.95745	1	0.77913	1	NA	NA	0.24177	1	0.46191	1	0.46437	1	0.4172	1	1	1
16p gain	65 (13%)	425	0.5952	1	0.072672	1	0.26367	1	0.39982	1	0.82506	1	0.083555	1	0.71461	1	0.74225	1	0.13293	1
16q gain	58 (12%)	432	0.47374	1	0.094616	1	0.10651	1	0.19078	1	0.67914	1	0.14295	1	1	1	0.73959	1	0.46882	1
17p gain	16 (3%)	474	0.46633	1	0.54856	1	0.79583	1	NA	NA	0.28107	1	0.50278	1	0.14978	1	0.14731	1	0.15353	1
17q gain	22 (4%)	468	0.14902	1	0.5582	1	0.64781	1	0.16133	1	0.32886	1	1	1	0.55316	1	0.43325	1	0.20598	1
18p gain	18 (4%)	472	0.086977	1	0.79992	1	0.022997	1	NA	NA	0.96303	1	1	1	0.33214	1	0.5146	1	1	1
18q gain	18 (4%)	472	0.086977	1	0.79992	1	0.022997	1	NA	NA	0.96303	1	1	1	0.33214	1	0.5146	1	1	1
19p gain	25 (5%)	465	0.92609	1	0.72401	1	1	1	0.16133	1	0.54053	1	0.30326	1	0.25285	1	0.22772	1	0.23122	1
19q gain	28 (6%)	462	0.87405	1	0.73123	1	0.68396	1	0.16133	1	0.48389	1	0.36061	1	0.17532	1	0.23776	1	0.028317	1
20p gain	65 (13%)	425	0.19579	1	0.1994	1	0.017132	1	0.3153	1	0.0035423	1	0.48299	1	0.04135	1	0.014701	1	0.51067	1
20q gain	67 (14%)	423	0.32764	1	0.16148	1	0.026643	1	0.3153	1	0.0061426	1	0.48299	1	0.10285	1	0.023835	1	0.52213	1
21q gain	32 (7%)	458	0.2088	1	0.22625	1	0.84814	1	0.16133	1	0.48837	1	1	1	1	1	0.90288	1	1	1
22q gain	25 (5%)	465	0.9526	1	0.85053	1	0.52448	1	NA	NA	0.20013	1	1	1	0.25285	1	0.45012	1	1	1
Xq gain	11 (2%)	479	0.44676	1	0.71072	1	0.055821	1	NA	NA	0.87075	1	1	1	0.074684	1	0.047399	1	0.10774	1
1p loss	31 (6%)	459	0.9848	1	0.16714	1	0.5622	1	0.11501	1	0.019175	1	0.60682	1	0.45027	1	0.092203	1	1	1
1q loss	21 (4%)	469	0.76903	1	0.6203	1	0.64368	1	NA	NA	0.085061	1	1	1	0.75632	1	0.25559	1	1	1
2p loss	10 (2%)	480	0.46637	1	0.94556	1	0.50559	1	NA	NA	0.092842	1	1	1	1	1	0.48302	1	1	1
2q loss	11 (2%)	479	0.84782	1	0.99811	1	0.34347	1	NA	NA	0.19433	1	1	1	1	1	0.74705	1	1	1
3p loss	303 (62%)	187	0.51219	1	0.36597	1	0.063984	1	0.90604	1	0.010628	1	0.46323	1	0.0067019	1	0.014582	1	0.37467	1
3q loss	73 (15%)	417	0.93825	1	0.026088	1	0.00079213	0.478	0.57273	1	0.35197	1	1	1	0.48647	1	0.52445	1	0.55523	1
4p loss	34 (7%)	456	0.091651	1	0.71264	1	0.71059	1	0.017614	1	0.016553	1	1	1	0.63168	1	0.082961	1	0.30309	1
4q loss	28 (6%)	462	0.018835	1	0.96726	1	0.84021	1	0.026091	1	0.0036219	1	1	1	0.17532	1	0.027128	1	0.2558	1
6p loss	57 (12%)	433	0.32936	1	0.19165	1	0.0029853	1	0.49947	1	0.87956	1	0.17145	1	0.4354	1	0.81692	1	0.46262	1
6q loss	82 (17%)	408	0.53157	1	0.7623	1	0.1	1	0.85135	1	0.96934	1	0.060116	1	0.86891	1	0.76088	1	1	1
8p loss	94 (19%)	396	0.52989	1	0.10784	1	0.27948	1	0.081656	1	0.62392	1	0.32162	1	0.43148	1	0.54449	1	1	1
8q loss	37 (8%)	453	0.27464	1	0.94436	1	0.046942	1	0.004195	1	0.98811	1	0.60761	1	0.24312	1	0.85378	1	1	1
9p loss	87 (18%)	403	0.011966	1	0.072132	1	0.012753	1	0.026091	1	0.19968	1	0.74535	1	0.021252	1	0.09859	1	0.21691	1
9q loss	92 (19%)	398	0.0059118	1	0.039976	1	0.015125	1	0.047262	1	0.019206	1	1	1	0.0036017	1	0.0050615	1	0.23734	1
10p loss	32 (7%)	458	0.51452	1	0.51248	1	0.44943	1	0.026091	1	0.014632	1	1	1	0.80252	1	0.87826	1	1	1
10q loss	48 (10%)	442	0.7554	1	0.27567	1	0.26652	1	0.053515	1	0.0089105	1	0.62156	1	0.67653	1	0.64397	1	1	1
11p loss	5 (1%)	485	4.2958e-05	0.0261	0.93574	1	0.66222	1	NA	NA	0.72842	1	0.14182	1	0.57107	1	0.90889	1	1	1
11q loss	7 (1%)	483	0.15266	1	0.64654	1	0.43025	1	NA	NA	0.79899	1	0.26449	1	1	1	1	1	1	1
13q loss	31 (6%)	459	0.0013064	0.786	0.055739	1	0.33277	1	0.004195	1	0.0014256	0.857	1	1	0.040548	1	0.012457	1	1	1
14q loss	158 (32%)	332	0.26761	1	0.23457	1	0.22509	1	0.50834	1	0.024243	1	0.068806	1	0.14454	1	0.030005	1	0.039315	1
15q loss	11 (2%)	479	0.52945	1	0.047958	1	0.75462	1	NA	NA	0.4055	1	0.37047	1	0.68262	1	0.38971	1	1	1
16q loss	5 (1%)	485	0.089754	1	0.072329	1	0.66222	1	NA	NA	0.0064549	1	1	1	0.57107	1	0.074215	1	1	1
17p loss	25 (5%)	465	0.040477	1	0.67815	1	0.28658	1	0.047262	1	0.13403	1	1	1	0.040162	1	0.22772	1	0.23122	1
17q loss	12 (2%)	478	0.69056	1	0.81655	1	0.23063	1	NA	NA	0.048539	1	1	1	1	1	0.47143	1	0.11705	1
18p loss	45 (9%)	445	0.20837	1	0.062174	1	0.62589	1	0.51805	1	0.086773	1	0.6801	1	0.19651	1	0.31881	1	0.38352	1
18q loss	47 (10%)	443	0.54006	1	0.14414	1	0.33491	1	0.51805	1	0.37947	1	0.69175	1	0.28713	1	0.62562	1	0.39731	1
19p loss	4 (1%)	486	0.00055729	0.337	0.90119	1	0.61374	1	NA	NA	0.014258	1	1	1	1	1	0.069689	1	1	1
20p loss	6 (1%)	484	0.76096	1	0.9567	1	1	1	NA	NA	0.88121	1	1	1	1	1	0.93124	1	1	1
21q loss	32 (7%)	458	0.76828	1	0.97402	1	1	1	NA	NA	0.0059406	1	0.36061	1	0.45035	1	0.17678	1	1	1
22q loss	11 (2%)	479	0.23218	1	0.046447	1	0.34347	1	NA	NA	0.27361	1	1	1	1	1	0.19298	1	1	1
Xq loss	7 (1%)	483	0.50412	1	0.73449	1	0.10207	1	NA	NA	0.63269	1	1	1	0.60241	1	0.57675	1	1	1