Clinical Features	Time to Death		AGE		HISTOLOGICAL.TYPE		RADIATIONS.RADIATION.REGIMENINDICATION		NEOADJUVANT.THERAPY	
	nCNV (%)	nWild-Type	logrank test_P	logrank test_Q	t-test_P	t-test_Q	Chi-square test_P	Chi-square test_Q	Fisher's exact test_P	Fisher's exact test_Q	Fisher's exact test_P	Fisher's exact test_Q
Amp Peak  1(1p35.2)	39 (9%)	383	0.60554	1	0.00020457	0.0732	7.1881e-11	3.08e-08	1	1	0.04943	1
Amp Peak  2(1p34.3)	42 (10%)	380	0.43177	1	0.0031379	1	8.7165e-15	3.94e-12	0.37949	1	0.038753	1
Amp Peak  3(1p22.3)	68 (16%)	354	0.93812	1	0.0036265	1	0.015767	1	0.88629	1	0.28438	1
Amp Peak  4(1q21.3)	182 (43%)	240	0.26519	1	4.1957e-05	0.0156	0.0039803	1	0.67101	1	0.20985	1
Amp Peak  5(1q22)	194 (46%)	228	0.053609	1	1.9196e-06	0.000751	0.00043484	0.148	0.52737	1	0.90991	1
Amp Peak  6(1q44)	172 (41%)	250	0.3062	1	0.011624	1	0.21929	1	0.66871	1	0.64602	1
Amp Peak  7(2p23.2)	92 (22%)	330	0.0048183	1	0.0035355	1	5.2341e-10	2.23e-07	0.030591	1	0.27358	1
Amp Peak  8(2q13)	86 (20%)	336	0.012918	1	0.00035198	0.121	1.7634e-13	7.86e-11	0.69697	1	0.067981	1
Amp Peak  9(3p25.1)	59 (14%)	363	0.34925	1	0.00029191	0.102	9.1791e-09	3.8e-06	0.12922	1	0.62757	1
Amp Peak 10(3q26.2)	123 (29%)	299	0.22356	1	2.4291e-09	1.02e-06	1.1087e-22	5.28e-20	0.16589	1	0.0011415	0.385
Amp Peak 11(4p16.3)	38 (9%)	384	0.90063	1	1.4412e-06	0.000566	8.1294e-16	3.72e-13	0.71377	1	0.03105	1
Amp Peak 12(5p15.33)	61 (14%)	361	0.044682	1	0.0015943	0.531	2.6827e-15	1.22e-12	0.65422	1	0.20251	1
Amp Peak 13(6p24.2)	79 (19%)	343	0.91604	1	7.0208e-06	0.0027	5.7295e-17	2.64e-14	0.28042	1	0.11328	1
Amp Peak 14(6q25.1)	59 (14%)	363	0.5354	1	0.042832	1	0.00035056	0.121	0.76278	1	0.41894	1
Amp Peak 15(7q32.2)	57 (14%)	365	3.9759e-05	0.0148	0.3133	1	0.15157	1	0.045071	1	0.86891	1
Amp Peak 16(8p11.21)	122 (29%)	300	4.3362e-05	0.016	0.35374	1	1.2954e-06	0.00051	0.048224	1	0.26196	1
Amp Peak 17(8q24.21)	148 (35%)	274	0.0020994	0.684	0.45499	1	4.1119e-11	1.78e-08	0.09797	1	0.0019937	0.66
Amp Peak 18(8q24.21)	157 (37%)	265	0.010526	1	0.24885	1	1.0356e-11	4.52e-09	0.022212	1	0.010063	1
Amp Peak 19(9p24.2)	46 (11%)	376	0.90843	1	0.012113	1	6.8018e-07	0.00027	0.17781	1	0.046758	1
Amp Peak 20(9q34.3)	31 (7%)	391	0.075761	1	0.00039399	0.134	1.8307e-06	0.000718	0.84303	1	0.19155	1
Amp Peak 21(10q22.2)	114 (27%)	308	0.24177	1	0.52748	1	0.23279	1	0.47765	1	0.097748	1
Amp Peak 22(11p11.2)	36 (9%)	386	0.032974	1	0.00017045	0.0612	8.6169e-08	3.47e-05	0.45768	1	0.41938	1
Amp Peak 23(11q13.2)	53 (13%)	369	0.2036	1	0.0034878	1	1.0124e-06	0.000401	1	1	0.059388	1
Amp Peak 24(11q13.3)	41 (10%)	381	0.095179	1	0.15195	1	0.11514	1	0.37866	1	0.70618	1
Amp Peak 25(12p12.1)	65 (15%)	357	0.70583	1	0.57892	1	3.9305e-06	0.00152	0.38533	1	1	1
Amp Peak 26(12q13.11)	65 (15%)	357	0.82733	1	0.80321	1	2.9355e-06	0.00114	0.14653	1	0.63912	1
Amp Peak 27(12q13.2)	68 (16%)	354	0.81447	1	0.1637	1	1.0549e-05	0.00402	0.087157	1	0.75878	1
Amp Peak 28(13q34)	40 (9%)	382	0.677	1	4.5372e-07	0.000181	7.0748e-11	3.04e-08	1	1	0.24784	1
Amp Peak 29(14q24.3)	46 (11%)	376	0.4774	1	1.542e-05	0.00584	5.6024e-10	2.38e-07	0.17781	1	0.010115	1
Amp Peak 30(14q32.33)	56 (13%)	366	0.16742	1	0.0002385	0.0842	2.181e-08	9.01e-06	0.12037	1	0.020103	1
Amp Peak 31(15q26.3)	26 (6%)	396	0.83716	1	0.20178	1	0.011913	1	0.082803	1	0.10201	1
Amp Peak 32(16p11.2)	44 (10%)	378	0.19263	1	0.00038954	0.133	7.5031e-14	3.38e-11	1	1	0.0001341	0.0484
Amp Peak 33(17p13.3)	31 (7%)	391	0.46745	1	0.021312	1	2.2989e-09	9.66e-07	0.84303	1	0.009045	1
Amp Peak 34(17q11.2)	52 (12%)	370	0.052681	1	0.00023089	0.0817	2.6056e-14	1.18e-11	0.527	1	0.039566	1
Amp Peak 35(17q12)	51 (12%)	371	0.060221	1	0.00012777	0.0464	8.7774e-18	4.06e-15	0.74746	1	0.0053154	1
Amp Peak 36(17q21.32)	46 (11%)	376	0.052099	1	3.6275e-06	0.0014	1.0567e-09	4.47e-07	0.86618	1	0.046758	1
Amp Peak 37(17q25.3)	62 (15%)	360	0.11572	1	0.00031552	0.109	5.5915e-13	2.49e-10	0.65608	1	0.0012315	0.413
Amp Peak 38(18q11.2)	47 (11%)	375	0.11099	1	0.017978	1	1.9764e-11	8.58e-09	0.73824	1	1	1
Amp Peak 39(19p13.2)	66 (16%)	356	0.93554	1	4.3164e-11	1.86e-08	2.0164e-18	9.38e-16	0.24631	1	0.64103	1
Amp Peak 40(19p13.11)	64 (15%)	358	0.54706	1	1.3783e-09	5.82e-07	6.9065e-20	3.25e-17	0.30529	1	0.1152	1
Amp Peak 41(19q12)	77 (18%)	345	0.005046	1	1.6989e-09	7.15e-07	4.1032e-36	1.99e-33	0.68343	1	0.00036774	0.126
Amp Peak 42(20p13)	81 (19%)	341	0.1562	1	3.181e-05	0.0119	4.7415e-12	2.08e-09	0.18371	1	0.0061072	1
Amp Peak 43(20q11.21)	99 (23%)	323	0.073635	1	1.3032e-07	5.24e-05	2.5025e-24	1.2e-21	0.062588	1	0.015936	1
Amp Peak 44(20q13.33)	107 (25%)	315	0.36868	1	3.7452e-08	1.53e-05	7.4787e-20	3.51e-17	0.0035538	1	0.027824	1
Amp Peak 45(22q12.2)	41 (10%)	381	0.59283	1	0.002987	0.962	4.2728e-19	2e-16	0.21627	1	0.25925	1
Amp Peak 46(Xp11.22)	67 (16%)	355	0.27167	1	0.39823	1	0.12198	1	0.11329	1	0.28246	1
Amp Peak 47(Xq28)	71 (17%)	351	0.0084168	1	0.18668	1	0.027681	1	1	1	0.6523	1
Del Peak  1(1p36.21)	51 (12%)	371	0.3929	1	0.00014157	0.051	4.7056e-08	1.91e-05	0.51952	1	0.036362	1
Del Peak  2(1p36.11)	55 (13%)	367	0.29987	1	0.00025424	0.0892	6.9884e-11	3.01e-08	0.87594	1	0.091946	1
Del Peak  3(1q43)	7 (2%)	415	0.026211	1	0.020393	1	0.7451	1	0.10469	1	1	1
Del Peak  4(2p25.3)	21 (5%)	401	0.026756	1	0.13603	1	0.024032	1	0.096439	1	0.311	1
Del Peak  5(2q22.1)	33 (8%)	389	2.2092e-07	8.86e-05	0.012865	1	4.0712e-05	0.0151	0.017243	1	1	1
Del Peak  6(2q37.3)	34 (8%)	388	0.8737	1	0.00022674	0.0805	0.02703	1	0.69949	1	0.3003	1
Del Peak  7(3p14.2)	55 (13%)	367	0.77593	1	1.0886e-05	0.00414	9.0297e-14	4.05e-11	0.4346	1	0.17833	1
Del Peak  8(4p16.3)	59 (14%)	363	0.25558	1	0.00061783	0.209	4.4961e-12	1.98e-09	0.54579	1	0.021751	1
Del Peak  9(4q22.1)	71 (17%)	351	0.01787	1	7.0402e-05	0.0258	3.3755e-24	1.61e-21	0.20515	1	0.0023909	0.777
Del Peak 10(4q34.3)	86 (20%)	336	0.050942	1	0.00012781	0.0464	1.3231e-24	6.35e-22	0.36295	1	7.213e-05	0.0264
Del Peak 11(5q11.2)	69 (16%)	353	0.12244	1	2.2584e-05	0.00849	1.5048e-22	7.15e-20	0.77651	1	0.046057	1
Del Peak 12(6q26)	33 (8%)	389	0.21371	1	0.016233	1	3.8688e-08	1.58e-05	0.84489	1	0.40801	1
Del Peak 13(7p22.3)	53 (13%)	369	0.034317	1	1.9811e-05	0.00747	1.6414e-12	7.27e-10	0.75142	1	0.025721	1
Del Peak 14(7q31.1)	38 (9%)	384	0.70623	1	3.406e-06	0.00132	5.9315e-17	2.72e-14	0.71377	1	0.0013572	0.453
Del Peak 15(7q36.3)	48 (11%)	374	0.56588	1	4.2614e-08	1.73e-05	1.2192e-16	5.58e-14	1	1	0.019397	1
Del Peak 16(8p23.2)	77 (18%)	345	0.29457	1	0.002038	0.668	2.6788e-25	1.29e-22	0.68343	1	0.002007	0.662
Del Peak 17(8p21.2)	77 (18%)	345	0.62466	1	4.2327e-05	0.0157	1.4313e-32	6.91e-30	0.68343	1	0.00011043	0.0403
Del Peak 18(9p23)	46 (11%)	376	0.37175	1	0.00026679	0.0931	1.4819e-10	6.33e-08	0.3135	1	0.20486	1
Del Peak 19(9q21.2)	88 (21%)	334	0.076496	1	7.0081e-12	3.07e-09	1.6978e-19	7.95e-17	0.30111	1	0.025909	1
Del Peak 20(9q34.11)	95 (23%)	327	0.48587	1	7.6997e-10	3.26e-07	4.0247e-18	1.86e-15	0.31359	1	0.014432	1
Del Peak 21(10p12.31)	27 (6%)	395	0.67175	1	0.16526	1	2.9406e-05	0.011	0.39205	1	0.062274	1
Del Peak 22(10q21.1)	27 (6%)	395	0.91252	1	0.064568	1	0.007045	1	1	1	0.82088	1
Del Peak 23(10q23.31)	50 (12%)	372	0.23894	1	0.030099	1	0.00022116	0.079	0.075529	1	0.38249	1
Del Peak 24(11p15.5)	72 (17%)	350	0.023448	1	6.9538e-08	2.81e-05	2.4231e-21	1.15e-18	0.16199	1	0.016334	1
Del Peak 25(11q14.1)	48 (11%)	374	0.048467	1	9.6024e-06	0.00368	3.2033e-12	1.42e-09	0.62033	1	0.019397	1
Del Peak 26(11q25)	67 (16%)	355	0.0028703	0.927	0.00012411	0.0452	1.0576e-13	4.74e-11	0.030174	1	0.06251	1
Del Peak 27(12q23.1)	31 (7%)	391	0.0455	1	0.0045125	1	2.2989e-09	9.66e-07	0.68699	1	0.009045	1
Del Peak 28(12q24.33)	40 (9%)	382	0.074096	1	0.00022117	0.079	1.5492e-11	6.74e-09	0.1499	1	0.03196	1
Del Peak 29(13q14.2)	64 (15%)	358	0.075669	1	0.0020698	0.677	0.00025256	0.0889	0.18689	1	0.75296	1
Del Peak 30(14q13.1)	51 (12%)	371	0.0038641	1	0.0050503	1	3.6561e-12	1.61e-09	0.63001	1	0.081556	1
Del Peak 31(15q15.1)	95 (23%)	327	0.061342	1	3.8425e-09	1.6e-06	8.2957e-20	3.89e-17	0.060257	1	0.014432	1
Del Peak 32(15q23)	76 (18%)	346	0.048439	1	1.2785e-06	0.000505	5.2909e-19	2.47e-16	0.22128	1	0.039453	1
Del Peak 33(16p13.3)	59 (14%)	363	0.02858	1	2.8562e-08	1.17e-05	2.3039e-15	1.05e-12	0.36432	1	0.41894	1
Del Peak 34(16q21)	108 (26%)	314	0.086491	1	2.9232e-09	1.22e-06	7.2109e-21	3.4e-18	0.33479	1	0.0043164	1
Del Peak 35(16q22.3)	113 (27%)	309	0.14002	1	6.4984e-09	2.7e-06	1.532e-21	7.26e-19	0.47904	1	0.010999	1
Del Peak 36(16q23.1)	118 (28%)	304	0.10149	1	3.2962e-08	1.35e-05	2.2279e-24	1.07e-21	0.41437	1	0.00025547	0.0894
Del Peak 37(17p13.3)	77 (18%)	345	0.20858	1	3.3725e-06	0.00131	2.1325e-18	9.89e-16	0.3408	1	0.002007	0.662
Del Peak 38(17p11.2)	83 (20%)	339	0.086211	1	2.5636e-08	1.06e-05	4.3644e-26	2.1e-23	0.35581	1	0.001659	0.551
Del Peak 39(17q11.2)	70 (17%)	352	0.83493	1	6.4338e-07	0.000256	9.6483e-12	4.22e-09	0.20453	1	0.17154	1
Del Peak 40(17q21.31)	67 (16%)	355	0.60329	1	5.1665e-06	0.00199	7.5202e-11	3.22e-08	0.31504	1	0.06251	1
Del Peak 41(18q23)	68 (16%)	354	0.02839	1	0.00031214	0.108	7.3718e-15	3.34e-12	0.0039324	1	0.53902	1
Del Peak 42(19p13.3)	106 (25%)	316	0.0077973	1	1.2676e-13	5.67e-11	1.6424e-41	7.97e-39	0.27514	1	0.00063264	0.214
Del Peak 43(19p12)	34 (8%)	388	0.090704	1	0.0027147	0.88	2.4012e-07	9.6e-05	0.24516	1	0.3003	1
Del Peak 44(19q13.43)	44 (10%)	378	0.0011883	0.399	1.8861e-05	0.00713	4.8597e-15	2.21e-12	0.86533	1	0.01493	1
Del Peak 45(20p12.1)	23 (5%)	399	0.2332	1	0.056197	1	0.029482	1	0.65125	1	0.80791	1
Del Peak 46(20q13.12)	10 (2%)	412	0.95578	1	0.53277	1	0.074172	1	0.076452	1	0.71326	1
Del Peak 47(22q11.21)	54 (13%)	368	0.75006	1	0.0090244	1	0.022556	1	0.039872	1	0.3981	1
Del Peak 48(22q12.1)	65 (15%)	357	0.37442	1	0.0030496	0.979	1.0531e-05	0.00402	0.080767	1	0.12075	1
Del Peak 49(22q13.31)	92 (22%)	330	0.032912	1	5.4567e-08	2.21e-05	4.2358e-17	1.95e-14	0.30792	1	0.028363	1
Del Peak 50(Xp21.1)	60 (14%)	362	0.0032003	1	5.6446e-05	0.0208	6.5537e-13	2.91e-10	0.45611	1	0.51788	1