Broad GDAC analyses__2012_09_13__ov

Tumor	BCR	Clinical	CN	LowP	Methylation	mRNA	mRNAseq	miR	miRseq	RPPA	MAF
OV	592	580	566	0	557	574	297	570	454	412	316

Note that the links below require Broad internal Firehose login credentials.

	Pipeline	Successful
1	Aggregate_Clusters	1
2	Aggregate_Gene_Status	1
3	CoMut2.0	1
4	CopyNumber_Clustering_CNMF	1
5	CopyNumber_GeneBySample	1
6	CopyNumber_Gistic2	1
7	CopyNumber_Gistic2_Postprocess_Focal	1
8	Correlate_Clinical_vs_CopyNumber_Arm	1
9	Correlate_Clinical_vs_CopyNumber_Focal	1
10	Correlate_Clinical_vs_Methylation	1
11	Correlate_Clinical_vs_miR	1
12	Correlate_Clinical_vs_miRseq	1
13	Correlate_Clinical_vs_Molecular_Signatures	1
14	Correlate_Clinical_vs_mRNA	1
15	Correlate_Clinical_vs_mRNAseq	1
16	Correlate_Clinical_vs_Mutation	1
17	Correlate_Clinical_vs_RPPA	1
18	Correlate_CopyNumber_vs_miR	1
19	Correlate_CopyNumber_vs_mRNA	1
20	Correlate_CopyNumber_vs_mRNAseq	1
21	Correlate_Methylation_vs_mRNA	1
22	GenerateStickFigures2.0	1
23	GenerateStickFiguresS2N	1
24	Methylation_Clustering_CNMF	1
25	Methylation_Preprocess	1
26	miR_Clustering_CNMF	1
27	miR_Clustering_Consensus	1
28	miR_FindDirectTargets	1
29	miR_Preprocess	1
30	miRseq_Clustering_CNMF	1
31	miRseq_Clustering_Consensus	1
32	miRseq_Preprocess	1
33	mRNA_Clustering_CNMF	1
34	mRNA_Clustering_Consensus	1
35	mRNA_Preprocess_Median	1
36	mRNAseq_Clustering_CNMF	1
37	mRNAseq_Clustering_Consensus	1
38	mRNAseq_Preprocess	1
39	Mutation_Assessor	1
40	MutSigNozzleReport2.0	1
41	MutSigNozzleReportS2N	1
42	MutSigPreprocess2.0	1
43	MutSigRun2.0	1
44	MutSigRunS2N	1
45	Pathway_FindEnrichedGenes	1
46	Pathway_Paradigm_Expression	1
47	Pathway_Paradigm_Expression_CopyNumber	1
48	ProcessCoverageForMutSig2.0	1
49	RPPA_Clustering_CNMF	1
50	RPPA_Clustering_Consensus	1
	Total	50

This table generated on Mon Oct 29 22:04:46 2012

Broad GDAC Analyses Status analyses__2012_09_13__ov_00 Run for Tumor Type: OV

Broad GDAC Analyses Status
analyses__2012_09_13__ov_00 Run for Tumor Type: OV