
R version 2.10.1 (2009-12-14)
Copyright (C) 2009 The R Foundation for Statistical Computing
ISBN 3-900051-07-0

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> source("/xchip/tcga/gdac_prod/applications/tcga-gdac-genepattern/gp-3.2.4-9272/Tomcat/../../taskLib/Correlate_Clinical_Cnvs_onlysig.41.3771/CNV2ClinicalAnalysis_nozzle_onlysig.R")
> result <- main("/xchip/tcga/gdac_prod/applications/tcga-gdac-genepattern/gp-3.2.4-9272/Tomcat/../../taskLib/Correlate_Clinical_Cnvs_onlysig.41.3771/", "-nF=/xchip/tcga/Tools/Nozzle/v1.current", "-iD=/xchip/cga/gdac-prod/tcga-gdac-genepattern/jobResults/181516/all_lesions.conf_99.cnv.cluster.txt", "-iC=/xchip/cga/gdac-prod/tcga-gdac/jobResults/GDAC_clinicalDataPickerPipeline/LGG/1709121/1.GDAC_clinicalDataPicker.Finished/LGG.clin.merged.picked.txt", "-fF=ALL", "-fC=3", "-fH=5", "-fW=9", "-fP=OUT", "-cP=1", "-cQ=0.25", "-MF=ONLYSIG", "-oT=LGG", "-nV=Nozzle.R1", "-OP=MUTSIG", "-iT=", "-iX=")
[1] "nver"          "-nV=Nozzle.R1"
[1] "nfn"                                 "/xchip/tcga/Tools/Nozzle/v1.current"
[1] "Nozzle.R1"
[1] "successfully load Nozzle.R1"
[1] "ofn"     "-oT=LGG"
[1] "opt"        "-OP=MUTSIG"
[1] "tl"   "-iT="
[1] "dx"   "-iX="
[1] "opt"    "MUTSIG"
[1] "dx" ""  

nPatients in clinical file=161, in cluster file=146, common to both=145
[1]  36 145
[1] "Amp Peak  1(1q32.1) mutation analysis"
[1] 3
  AMP PEAK  1(1Q32.1) MUTATED AMP PEAK  1(1Q32.1) WILD-TYPE 
                           18                           127 
  AMP PEAK  1(1Q32.1) MUTATED AMP PEAK  1(1Q32.1) WILD-TYPE 
                           18                           127 
[1] "Amp Peak  2(4q12) mutation analysis"
[1] 3
  AMP PEAK  2(4Q12) MUTATED AMP PEAK  2(4Q12) WILD-TYPE 
                          8                         137 
  AMP PEAK  2(4Q12) MUTATED AMP PEAK  2(4Q12) WILD-TYPE 
                          8                         137 
[1] "Amp Peak  3(7p11.2) mutation analysis"
[1] 3
  AMP PEAK  3(7P11.2) MUTATED AMP PEAK  3(7P11.2) WILD-TYPE 
                           40                           105 
  AMP PEAK  3(7P11.2) MUTATED AMP PEAK  3(7P11.2) WILD-TYPE 
                           40                           105 
[1] "Amp Peak  4(7q32.3) mutation analysis"
[1] 3
  AMP PEAK  4(7Q32.3) MUTATED AMP PEAK  4(7Q32.3) WILD-TYPE 
                           56                            89 
  AMP PEAK  4(7Q32.3) MUTATED AMP PEAK  4(7Q32.3) WILD-TYPE 
                           56                            89 
[1] "Amp Peak  5(8q24.21) mutation analysis"
[1] 3
  AMP PEAK  5(8Q24.21) MUTATED AMP PEAK  5(8Q24.21) WILD-TYPE 
                            31                            114 
  AMP PEAK  5(8Q24.21) MUTATED AMP PEAK  5(8Q24.21) WILD-TYPE 
                            31                            114 
[1] "Amp Peak  6(10p15.3) mutation analysis"
[1] 3
  AMP PEAK  6(10P15.3) MUTATED AMP PEAK  6(10P15.3) WILD-TYPE 
                            26                            119 
  AMP PEAK  6(10P15.3) MUTATED AMP PEAK  6(10P15.3) WILD-TYPE 
                            26                            119 
[1] "Amp Peak  7(11q23.3) mutation analysis"
[1] 3
  AMP PEAK  7(11Q23.3) MUTATED AMP PEAK  7(11Q23.3) WILD-TYPE 
                            30                            115 
  AMP PEAK  7(11Q23.3) MUTATED AMP PEAK  7(11Q23.3) WILD-TYPE 
                            30                            115 
[1] "Amp Peak  8(12p13.32) mutation analysis"
[1] 3
  AMP PEAK  8(12P13.32) MUTATED AMP PEAK  8(12P13.32) WILD-TYPE 
                             24                             121 
  AMP PEAK  8(12P13.32) MUTATED AMP PEAK  8(12P13.32) WILD-TYPE 
                             24                             121 
[1] "Amp Peak  9(12q14.1) mutation analysis"
[1] 3
  AMP PEAK  9(12Q14.1) MUTATED AMP PEAK  9(12Q14.1) WILD-TYPE 
                            12                            133 
  AMP PEAK  9(12Q14.1) MUTATED AMP PEAK  9(12Q14.1) WILD-TYPE 
                            12                            133 
[1] "Amp Peak 10(17q24.3) mutation analysis"
[1] 3
  AMP PEAK 10(17Q24.3) MUTATED AMP PEAK 10(17Q24.3) WILD-TYPE 
                            11                            134 
  AMP PEAK 10(17Q24.3) MUTATED AMP PEAK 10(17Q24.3) WILD-TYPE 
                            11                            134 
[1] "Amp Peak 11(19q13.2) mutation analysis"
[1] 3
  AMP PEAK 11(19Q13.2) MUTATED AMP PEAK 11(19Q13.2) WILD-TYPE 
                            11                            134 
  AMP PEAK 11(19Q13.2) MUTATED AMP PEAK 11(19Q13.2) WILD-TYPE 
                            11                            134 
[1] "Amp Peak 12(Xp22.33) mutation analysis"
[1] 3
  AMP PEAK 12(XP22.33) MUTATED AMP PEAK 12(XP22.33) WILD-TYPE 
                            12                            133 
  AMP PEAK 12(XP22.33) MUTATED AMP PEAK 12(XP22.33) WILD-TYPE 
                            12                            133 
[1] "Amp Peak 13(Xp11.22) mutation analysis"
[1] 3
  AMP PEAK 13(XP11.22) MUTATED AMP PEAK 13(XP11.22) WILD-TYPE 
                            14                            131 
  AMP PEAK 13(XP11.22) MUTATED AMP PEAK 13(XP11.22) WILD-TYPE 
                            14                            131 
[1] "Amp Peak 14(Xq11.2) mutation analysis"
[1] 3
  AMP PEAK 14(XQ11.2) MUTATED AMP PEAK 14(XQ11.2) WILD-TYPE 
                           19                           126 
  AMP PEAK 14(XQ11.2) MUTATED AMP PEAK 14(XQ11.2) WILD-TYPE 
                           19                           126 
[1] "Del Peak  1(1p36.31) mutation analysis"
[1] 3
  DEL PEAK  1(1P36.31) MUTATED DEL PEAK  1(1P36.31) WILD-TYPE 
                            53                             92 
  DEL PEAK  1(1P36.31) MUTATED DEL PEAK  1(1P36.31) WILD-TYPE 
                            53                             92 
[1] "Del Peak  2(1q44) mutation analysis"
[1] 3
  DEL PEAK  2(1Q44) MUTATED DEL PEAK  2(1Q44) WILD-TYPE 
                         10                         135 
  DEL PEAK  2(1Q44) MUTATED DEL PEAK  2(1Q44) WILD-TYPE 
                         10                         135 
[1] "Del Peak  3(2q37.3) mutation analysis"
[1] 3
  DEL PEAK  3(2Q37.3) MUTATED DEL PEAK  3(2Q37.3) WILD-TYPE 
                           25                           120 
  DEL PEAK  3(2Q37.3) MUTATED DEL PEAK  3(2Q37.3) WILD-TYPE 
                           25                           120 
[1] "Del Peak  4(3p21.1) mutation analysis"
[1] 3
  DEL PEAK  4(3P21.1) MUTATED DEL PEAK  4(3P21.1) WILD-TYPE 
                           15                           130 
  DEL PEAK  4(3P21.1) MUTATED DEL PEAK  4(3P21.1) WILD-TYPE 
                           15                           130 
[1] "Del Peak  5(3q29) mutation analysis"
[1] 3
  DEL PEAK  5(3Q29) MUTATED DEL PEAK  5(3Q29) WILD-TYPE 
                         17                         128 
  DEL PEAK  5(3Q29) MUTATED DEL PEAK  5(3Q29) WILD-TYPE 
                         17                         128 
[1] "Del Peak  6(4q34.1) mutation analysis"
[1] 3
  DEL PEAK  6(4Q34.1) MUTATED DEL PEAK  6(4Q34.1) WILD-TYPE 
                           48                            97 
  DEL PEAK  6(4Q34.1) MUTATED DEL PEAK  6(4Q34.1) WILD-TYPE 
                           48                            97 
[1] "Del Peak  7(4q35.1) mutation analysis"
[1] 3
  DEL PEAK  7(4Q35.1) MUTATED DEL PEAK  7(4Q35.1) WILD-TYPE 
                           50                            95 
  DEL PEAK  7(4Q35.1) MUTATED DEL PEAK  7(4Q35.1) WILD-TYPE 
                           50                            95 
[1] "Del Peak  8(5q35.2) mutation analysis"
[1] 3
  DEL PEAK  8(5Q35.2) MUTATED DEL PEAK  8(5Q35.2) WILD-TYPE 
                           22                           123 
  DEL PEAK  8(5Q35.2) MUTATED DEL PEAK  8(5Q35.2) WILD-TYPE 
                           22                           123 
[1] "Del Peak  9(6p24.1) mutation analysis"
[1] 3
  DEL PEAK  9(6P24.1) MUTATED DEL PEAK  9(6P24.1) WILD-TYPE 
                           14                           131 
  DEL PEAK  9(6P24.1) MUTATED DEL PEAK  9(6P24.1) WILD-TYPE 
                           14                           131 
[1] "Del Peak 10(6q25.1) mutation analysis"
[1] 3
  DEL PEAK 10(6Q25.1) MUTATED DEL PEAK 10(6Q25.1) WILD-TYPE 
                           23                           122 
  DEL PEAK 10(6Q25.1) MUTATED DEL PEAK 10(6Q25.1) WILD-TYPE 
                           23                           122 
[1] "Del Peak 11(9p21.3) mutation analysis"
[1] 3
  DEL PEAK 11(9P21.3) MUTATED DEL PEAK 11(9P21.3) WILD-TYPE 
                           56                            89 
  DEL PEAK 11(9P21.3) MUTATED DEL PEAK 11(9P21.3) WILD-TYPE 
                           56                            89 
[1] "Del Peak 12(10q26.13) mutation analysis"
[1] 3
  DEL PEAK 12(10Q26.13) MUTATED DEL PEAK 12(10Q26.13) WILD-TYPE 
                             45                             100 
  DEL PEAK 12(10Q26.13) MUTATED DEL PEAK 12(10Q26.13) WILD-TYPE 
                             45                             100 
[1] "Del Peak 13(11p15.5) mutation analysis"
[1] 3
  DEL PEAK 13(11P15.5) MUTATED DEL PEAK 13(11P15.5) WILD-TYPE 
                            30                            115 
  DEL PEAK 13(11P15.5) MUTATED DEL PEAK 13(11P15.5) WILD-TYPE 
                            30                            115 
[1] "Del Peak 14(13q14.13) mutation analysis"
[1] 3
  DEL PEAK 14(13Q14.13) MUTATED DEL PEAK 14(13Q14.13) WILD-TYPE 
                             44                             101 
  DEL PEAK 14(13Q14.13) MUTATED DEL PEAK 14(13Q14.13) WILD-TYPE 
                             44                             101 
[1] "Del Peak 15(13q34) mutation analysis"
[1] 3
  DEL PEAK 15(13Q34) MUTATED DEL PEAK 15(13Q34) WILD-TYPE 
                          31                          114 
  DEL PEAK 15(13Q34) MUTATED DEL PEAK 15(13Q34) WILD-TYPE 
                          31                          114 
[1] "Del Peak 16(14q24.3) mutation analysis"
[1] 3
  DEL PEAK 16(14Q24.3) MUTATED DEL PEAK 16(14Q24.3) WILD-TYPE 
                            38                            107 
  DEL PEAK 16(14Q24.3) MUTATED DEL PEAK 16(14Q24.3) WILD-TYPE 
                            38                            107 
[1] "Del Peak 17(17q25.3) mutation analysis"
[1] 3
  DEL PEAK 17(17Q25.3) MUTATED DEL PEAK 17(17Q25.3) WILD-TYPE 
                             7                            138 
  DEL PEAK 17(17Q25.3) MUTATED DEL PEAK 17(17Q25.3) WILD-TYPE 
                             7                            138 
[1] "Del Peak 18(18q23) mutation analysis"
[1] 3
  DEL PEAK 18(18Q23) MUTATED DEL PEAK 18(18Q23) WILD-TYPE 
                          24                          121 
  DEL PEAK 18(18Q23) MUTATED DEL PEAK 18(18Q23) WILD-TYPE 
                          24                          121 
[1] "Del Peak 19(19q13.43) mutation analysis"
[1] 3
  DEL PEAK 19(19Q13.43) MUTATED DEL PEAK 19(19Q13.43) WILD-TYPE 
                             83                              62 
  DEL PEAK 19(19Q13.43) MUTATED DEL PEAK 19(19Q13.43) WILD-TYPE 
                             83                              62 
[1] "Del Peak 20(22q13.31) mutation analysis"
[1] 3
  DEL PEAK 20(22Q13.31) MUTATED DEL PEAK 20(22Q13.31) WILD-TYPE 
                             21                             124 
  DEL PEAK 20(22Q13.31) MUTATED DEL PEAK 20(22Q13.31) WILD-TYPE 
                             21                             124 
[1] "Del Peak 21(Xp22.31) mutation analysis"
[1] 3
  DEL PEAK 21(XP22.31) MUTATED DEL PEAK 21(XP22.31) WILD-TYPE 
                            36                            109 
  DEL PEAK 21(XP22.31) MUTATED DEL PEAK 21(XP22.31) WILD-TYPE 
                            36                            109 
[1] "Del Peak 22(Xq21.1) mutation analysis"
[1] 3
  DEL PEAK 22(XQ21.1) MUTATED DEL PEAK 22(XQ21.1) WILD-TYPE 
                           21                           124 
  DEL PEAK 22(XQ21.1) MUTATED DEL PEAK 22(XQ21.1) WILD-TYPE 
                           21                           124 
[1] "data2feature, selection=ALL"
 [1] "YEARSTOBIRTH"                          
 [2] "DAYSTODEATH"                           
 [3] "DAYSTOLASTFOLLOWUP"                    
 [4] "VITALSTATUS"                           
 [5] "DCCUPLOADDATE"                         
 [6] "PRIMARYSITEOFDESEASE"                  
 [7] "GENDER"                                
 [8] "DATEOFINITIALPATHOLOGICDIAGNOSIS"      
 [9] "DAYSTOLASTKNOWNALIVE"                  
[10] "KARNOFSKYPERFORMANCESCORE"             
[11] "HISTOLOGICALTYPE"                      
[12] "RADIATIONS.RADIATION.REGIMENINDICATION"
[13] "NEOADJUVANTTHERAPY"                    
[14] "BATCHNUMBER"                           

Input Data has 14 rows and 145 columns.

[1] "Batch" "14"   
[1] "Last Follow UP"
TCGA-CS-4938 TCGA-CS-4941 TCGA-CS-4942 TCGA-CS-4943 TCGA-CS-4944 TCGA-CS-5390 
         143          234         1335          481          323         1965 
TCGA-CS-5393 TCGA-CS-5394 TCGA-CS-5395 TCGA-CS-5396 TCGA-CS-5397 TCGA-CS-6186 
         857            3          638          289          194          538 
TCGA-CS-6188 TCGA-CS-6290 TCGA-CS-6665 TCGA-CS-6666 TCGA-CS-6667 TCGA-CS-6668 
         725          546          378          257          229          243 
TCGA-CS-6669 TCGA-CS-6670 TCGA-DB-5270 TCGA-DB-5273 TCGA-DB-5274 TCGA-DB-5275 
         224          200         2977         1786         1726         1458 
TCGA-DB-5276 TCGA-DB-5277 TCGA-DB-5278 TCGA-DB-5279 TCGA-DB-5280 TCGA-DB-5281 
        1594         1419         1526         1354          404         1614 
TCGA-DH-5140 TCGA-DH-5141 TCGA-DH-5142 TCGA-DH-5143 TCGA-DH-5144 TCGA-DU-5847 
         607          968          921          438          244          547 
TCGA-DU-5849 TCGA-DU-5851 TCGA-DU-5852 TCGA-DU-5853 TCGA-DU-5854 TCGA-DU-5855 
         442          530           NA          407          257          207 
TCGA-DU-5870 TCGA-DU-5871 TCGA-DU-5872 TCGA-DU-5874 TCGA-DU-6392 TCGA-DU-6393 
        5546          576          531          460         6423         1219 
TCGA-DU-6394 TCGA-DU-6395 TCGA-DU-6396 TCGA-DU-6397 TCGA-DU-6399 TCGA-DU-6400 
         682         1491         2286         1401           NA           37 
TCGA-DU-6401 TCGA-DU-6402 TCGA-DU-6403 TCGA-DU-6404 TCGA-DU-6405 TCGA-DU-6406 
        2660          213          354           NA          605          511 
TCGA-DU-6407 TCGA-DU-6408 TCGA-DU-6410 TCGA-DU-6542 TCGA-DU-7006 TCGA-DU-7007 
        2875         3469          242          234           NA           NA 
TCGA-DU-7008 TCGA-DU-7009 TCGA-DU-7010 TCGA-DU-7011 TCGA-DU-7012 TCGA-DU-7013 
        4752         4205           NA           NA           NA           NA 
TCGA-DU-7014 TCGA-DU-7015 TCGA-DU-7018 TCGA-DU-7019 TCGA-DU-7290 TCGA-DU-7292 
          NA         2761           NA          800           NA           NA 
TCGA-DU-7294 TCGA-DU-7298 TCGA-DU-7299 TCGA-DU-7300 TCGA-DU-7301 TCGA-DU-7302 
        2868           NA           NA           NA           NA         1834 
TCGA-DU-7304 TCGA-DU-7306 TCGA-DU-7309 TCGA-E1-5302 TCGA-E1-5303 TCGA-E1-5304 
          NA         1277           84         1525         2051         1251 
TCGA-E1-5305 TCGA-E1-5307 TCGA-E1-5311 TCGA-E1-5318 TCGA-E1-5319 TCGA-E1-5322 
        2432         1762         4084         2378         2907         3978 
TCGA-EZ-7264 TCGA-FG-5962 TCGA-FG-5963 TCGA-FG-5964 TCGA-FG-5965 TCGA-FG-6688 
         160          787          407          377          979          220 
TCGA-FG-6689 TCGA-FG-6690 TCGA-FG-6691 TCGA-FG-6692 TCGA-FG-7634 TCGA-FG-7636 
         189          142          102          126          467          124 
TCGA-FG-7638 TCGA-FG-7643 TCGA-FN-7833 TCGA-HT-7467 TCGA-HT-7468 TCGA-HT-7470 
         233           27            4            3          146          268 
TCGA-HT-7472 TCGA-HT-7473 TCGA-HT-7474 TCGA-HT-7475 TCGA-HT-7476 TCGA-HT-7478 
           1          503          114          446          199          194 
TCGA-HT-7479 TCGA-HT-7480 TCGA-HT-7481 TCGA-HT-7482 TCGA-HT-7483 TCGA-HT-7485 
          13         2231         1800         1644         4687          121 
TCGA-HT-7601 TCGA-HT-7602 TCGA-HT-7603 TCGA-HT-7604 TCGA-HT-7605 TCGA-HT-7606 
          94          907          705         3283          139          526 
TCGA-HT-7607 TCGA-HT-7608 TCGA-HT-7609 TCGA-HT-7610 TCGA-HW-7486 TCGA-HW-7487 
          NA          671         1399         1706          608          409 
TCGA-HW-7489 TCGA-HW-7490 TCGA-HW-7491 TCGA-HW-7493 TCGA-HW-7495 TCGA-IK-7675 
         141          165          854          285           13           NA 
TCGA-IK-8125 
         909 
Variable 1:'AGE':	nDistinctValues=48,	numeric=TRUE,	binary=FALSE,	exclude=FALSE.
Variable 2:'DAYSTODEATH':	nDistinctValues=48,	numeric=TRUE,	binary=FALSE,	exclude=TRUE.
Variable 3:'DAYSTOLASTFOLLOWUP':	nDistinctValues=119,	numeric=TRUE,	binary=FALSE,	exclude=TRUE.
Variable 4:'VITALSTATUS':	nDistinctValues=2,	numeric=TRUE,	binary=TRUE,	exclude=FALSE.
Variable 5:'DCCUPLOADDAY':	nDistinctValues=2,	numeric=FALSE,	binary=FALSE,	exclude=TRUE.
Variable 6:'PRIMARY.SITE.OF.DISEASE':	nDistinctValues=1,	numeric=FALSE,	binary=FALSE,	exclude=TRUE.
Variable 7:'GENDER':	nDistinctValues=2,	numeric=FALSE,	binary=FALSE,	exclude=FALSE.
Variable 8:'DAYOFINITIALPATHOLOGICDIAGNOSIS':	nDistinctValues=19,	numeric=TRUE,	binary=FALSE,	exclude=TRUE.
Variable 9:'DAYSTOLASTKNOWNALIVE':	nDistinctValues=119,	numeric=TRUE,	binary=FALSE,	exclude=TRUE.
Variable 10:'KARNOFSKY.PERFORMANCE.SCORE':	nDistinctValues=5,	numeric=TRUE,	binary=FALSE,	exclude=FALSE.
Variable 11:'HISTOLOGICAL.TYPE':	nDistinctValues=3,	numeric=FALSE,	binary=FALSE,	exclude=FALSE.
Variable 12:'RADIATIONS.RADIATION.REGIMENINDICATION':	nDistinctValues=2,	numeric=FALSE,	binary=FALSE,	exclude=FALSE.
Variable 13:'NEOADJUVANT.THERAPY':	nDistinctValues=2,	numeric=FALSE,	binary=FALSE,	exclude=FALSE.
Variable 14:'BATCH.NUMBER':	nDistinctValues=6,	numeric=FALSE,	binary=FALSE,	exclude=TRUE.
[1] "rownames(nsurv.mat)"
[1] "AGE"                                   
[2] "GENDER"                                
[3] "KARNOFSKY.PERFORMANCE.SCORE"           
[4] "HISTOLOGICAL.TYPE"                     
[5] "RADIATIONS.RADIATION.REGIMENINDICATION"
[6] "NEOADJUVANT.THERAPY"                   
[1] "TUMOR.?STAGE"
[1] "TUMOR.?GRADE"
[1] "PATHOLOGY.T"
[1] "PATHOLOGY.N"
Output Data has 145 columns, 1 survival variables, and 6 non-survival variables.
AGE, nv=48, binary=FALSE, numeric=TRUE
GENDER, nv=2, binary=FALSE, numeric=FALSE
KARNOFSKY.PERFORMANCE.SCORE, nv=5, binary=FALSE, numeric=TRUE
HISTOLOGICAL.TYPE, nv=3, binary=FALSE, numeric=FALSE
RADIATIONS.RADIATION.REGIMENINDICATION, nv=2, binary=FALSE, numeric=FALSE
NEOADJUVANT.THERAPY, nv=2, binary=FALSE, numeric=FALSE

Clustering(1) Variable = Amp Peak  1(1q32.1) mutation analysis
D1V1, survival
                   TCGA-CS-4938                    TCGA-CS-4941 
"AMP PEAK  1(1Q32.1) WILD-TYPE"   "AMP PEAK  1(1Q32.1) MUTATED" 
                   TCGA-CS-4942                    TCGA-CS-4943 
"AMP PEAK  1(1Q32.1) WILD-TYPE" "AMP PEAK  1(1Q32.1) WILD-TYPE" 
                   TCGA-CS-4944                    TCGA-CS-5390 
"AMP PEAK  1(1Q32.1) WILD-TYPE" "AMP PEAK  1(1Q32.1) WILD-TYPE" 
                   TCGA-CS-5393                    TCGA-CS-5394 
"AMP PEAK  1(1Q32.1) WILD-TYPE" "AMP PEAK  1(1Q32.1) WILD-TYPE" 
                   TCGA-CS-5395                    TCGA-CS-5396 
  "AMP PEAK  1(1Q32.1) MUTATED" "AMP PEAK  1(1Q32.1) WILD-TYPE" 
                   TCGA-CS-5397                    TCGA-CS-6186 
  "AMP PEAK  1(1Q32.1) MUTATED" "AMP PEAK  1(1Q32.1) WILD-TYPE" 
                   TCGA-CS-6188                    TCGA-CS-6290 
"AMP PEAK  1(1Q32.1) WILD-TYPE" "AMP PEAK  1(1Q32.1) WILD-TYPE" 
                   TCGA-CS-6665                    TCGA-CS-6666 
  "AMP PEAK  1(1Q32.1) MUTATED" "AMP PEAK  1(1Q32.1) WILD-TYPE" 
                   TCGA-CS-6667                    TCGA-CS-6668 
"AMP PEAK  1(1Q32.1) WILD-TYPE" "AMP PEAK  1(1Q32.1) WILD-TYPE" 
                   TCGA-CS-6669                    TCGA-CS-6670 
"AMP PEAK  1(1Q32.1) WILD-TYPE" "AMP PEAK  1(1Q32.1) WILD-TYPE" 
                   TCGA-DB-5270                    TCGA-DB-5273 
"AMP PEAK  1(1Q32.1) WILD-TYPE" "AMP PEAK  1(1Q32.1) WILD-TYPE" 
                   TCGA-DB-5274                    TCGA-DB-5275 
"AMP PEAK  1(1Q32.1) WILD-TYPE" "AMP PEAK  1(1Q32.1) WILD-TYPE" 
                   TCGA-DB-5276                    TCGA-DB-5277 
"AMP PEAK  1(1Q32.1) WILD-TYPE"   "AMP PEAK  1(1Q32.1) MUTATED" 
                   TCGA-DB-5278                    TCGA-DB-5279 
"AMP PEAK  1(1Q32.1) WILD-TYPE" "AMP PEAK  1(1Q32.1) WILD-TYPE" 
                   TCGA-DB-5280                    TCGA-DB-5281 
"AMP PEAK  1(1Q32.1) WILD-TYPE" "AMP PEAK  1(1Q32.1) WILD-TYPE" 
                   TCGA-DH-5140                    TCGA-DH-5141 
"AMP PEAK  1(1Q32.1) WILD-TYPE" "AMP PEAK  1(1Q32.1) WILD-TYPE" 
                   TCGA-DH-5142                    TCGA-DH-5143 
"AMP PEAK  1(1Q32.1) WILD-TYPE" "AMP PEAK  1(1Q32.1) WILD-TYPE" 
                   TCGA-DH-5144                    TCGA-DU-5847 
"AMP PEAK  1(1Q32.1) WILD-TYPE" "AMP PEAK  1(1Q32.1) WILD-TYPE" 
                   TCGA-DU-5849                    TCGA-DU-5851 
"AMP PEAK  1(1Q32.1) WILD-TYPE" "AMP PEAK  1(1Q32.1) WILD-TYPE" 
                   TCGA-DU-5852                    TCGA-DU-5853 
"AMP PEAK  1(1Q32.1) WILD-TYPE" "AMP PEAK  1(1Q32.1) WILD-TYPE" 
                   TCGA-DU-5854                    TCGA-DU-5855 
"AMP PEAK  1(1Q32.1) WILD-TYPE" "AMP PEAK  1(1Q32.1) WILD-TYPE" 
                   TCGA-DU-5870                    TCGA-DU-5871 
"AMP PEAK  1(1Q32.1) WILD-TYPE" "AMP PEAK  1(1Q32.1) WILD-TYPE" 
                   TCGA-DU-5872                    TCGA-DU-5874 
"AMP PEAK  1(1Q32.1) WILD-TYPE" "AMP PEAK  1(1Q32.1) WILD-TYPE" 
                   TCGA-DU-6392                    TCGA-DU-6393 
  "AMP PEAK  1(1Q32.1) MUTATED" "AMP PEAK  1(1Q32.1) WILD-TYPE" 
                   TCGA-DU-6394                    TCGA-DU-6395 
"AMP PEAK  1(1Q32.1) WILD-TYPE" "AMP PEAK  1(1Q32.1) WILD-TYPE" 
                   TCGA-DU-6396                    TCGA-DU-6397 
"AMP PEAK  1(1Q32.1) WILD-TYPE" "AMP PEAK  1(1Q32.1) WILD-TYPE" 
                   TCGA-DU-6399                    TCGA-DU-6400 
"AMP PEAK  1(1Q32.1) WILD-TYPE"   "AMP PEAK  1(1Q32.1) MUTATED" 
                   TCGA-DU-6401                    TCGA-DU-6402 
"AMP PEAK  1(1Q32.1) WILD-TYPE" "AMP PEAK  1(1Q32.1) WILD-TYPE" 
                   TCGA-DU-6403                    TCGA-DU-6404 
  "AMP PEAK  1(1Q32.1) MUTATED" "AMP PEAK  1(1Q32.1) WILD-TYPE" 
                   TCGA-DU-6405                    TCGA-DU-6406 
"AMP PEAK  1(1Q32.1) WILD-TYPE" "AMP PEAK  1(1Q32.1) WILD-TYPE" 
                   TCGA-DU-6407                    TCGA-DU-6408 
"AMP PEAK  1(1Q32.1) WILD-TYPE" "AMP PEAK  1(1Q32.1) WILD-TYPE" 
                   TCGA-DU-6410                    TCGA-DU-6542 
"AMP PEAK  1(1Q32.1) WILD-TYPE" "AMP PEAK  1(1Q32.1) WILD-TYPE" 
                   TCGA-DU-7006                    TCGA-DU-7007 
"AMP PEAK  1(1Q32.1) WILD-TYPE" "AMP PEAK  1(1Q32.1) WILD-TYPE" 
                   TCGA-DU-7008                    TCGA-DU-7009 
"AMP PEAK  1(1Q32.1) WILD-TYPE" "AMP PEAK  1(1Q32.1) WILD-TYPE" 
                   TCGA-DU-7010                    TCGA-DU-7011 
  "AMP PEAK  1(1Q32.1) MUTATED" "AMP PEAK  1(1Q32.1) WILD-TYPE" 
                   TCGA-DU-7012                    TCGA-DU-7013 
"AMP PEAK  1(1Q32.1) WILD-TYPE" "AMP PEAK  1(1Q32.1) WILD-TYPE" 
                   TCGA-DU-7014                    TCGA-DU-7015 
"AMP PEAK  1(1Q32.1) WILD-TYPE"   "AMP PEAK  1(1Q32.1) MUTATED" 
                   TCGA-DU-7018                    TCGA-DU-7019 
"AMP PEAK  1(1Q32.1) WILD-TYPE" "AMP PEAK  1(1Q32.1) WILD-TYPE" 
                   TCGA-DU-7290                    TCGA-DU-7292 
  "AMP PEAK  1(1Q32.1) MUTATED"   "AMP PEAK  1(1Q32.1) MUTATED" 
                   TCGA-DU-7294                    TCGA-DU-7298 
"AMP PEAK  1(1Q32.1) WILD-TYPE" "AMP PEAK  1(1Q32.1) WILD-TYPE" 
                   TCGA-DU-7299                    TCGA-DU-7300 
"AMP PEAK  1(1Q32.1) WILD-TYPE" "AMP PEAK  1(1Q32.1) WILD-TYPE" 
                   TCGA-DU-7301                    TCGA-DU-7302 
"AMP PEAK  1(1Q32.1) WILD-TYPE" "AMP PEAK  1(1Q32.1) WILD-TYPE" 
                   TCGA-DU-7304                    TCGA-DU-7306 
  "AMP PEAK  1(1Q32.1) MUTATED" "AMP PEAK  1(1Q32.1) WILD-TYPE" 
                   TCGA-DU-7309                    TCGA-E1-5302 
"AMP PEAK  1(1Q32.1) WILD-TYPE" "AMP PEAK  1(1Q32.1) WILD-TYPE" 
                   TCGA-E1-5303                    TCGA-E1-5304 
"AMP PEAK  1(1Q32.1) WILD-TYPE" "AMP PEAK  1(1Q32.1) WILD-TYPE" 
                   TCGA-E1-5305                    TCGA-E1-5307 
"AMP PEAK  1(1Q32.1) WILD-TYPE" "AMP PEAK  1(1Q32.1) WILD-TYPE" 
                   TCGA-E1-5311                    TCGA-E1-5318 
"AMP PEAK  1(1Q32.1) WILD-TYPE" "AMP PEAK  1(1Q32.1) WILD-TYPE" 
                   TCGA-E1-5319                    TCGA-E1-5322 
"AMP PEAK  1(1Q32.1) WILD-TYPE" "AMP PEAK  1(1Q32.1) WILD-TYPE" 
                   TCGA-EZ-7264                    TCGA-FG-5962 
"AMP PEAK  1(1Q32.1) WILD-TYPE"   "AMP PEAK  1(1Q32.1) MUTATED" 
                   TCGA-FG-5963                    TCGA-FG-5964 
"AMP PEAK  1(1Q32.1) WILD-TYPE" "AMP PEAK  1(1Q32.1) WILD-TYPE" 
                   TCGA-FG-5965                    TCGA-FG-6688 
"AMP PEAK  1(1Q32.1) WILD-TYPE"   "AMP PEAK  1(1Q32.1) MUTATED" 
                   TCGA-FG-6689                    TCGA-FG-6690 
"AMP PEAK  1(1Q32.1) WILD-TYPE" "AMP PEAK  1(1Q32.1) WILD-TYPE" 
                   TCGA-FG-6691                    TCGA-FG-6692 
"AMP PEAK  1(1Q32.1) WILD-TYPE"   "AMP PEAK  1(1Q32.1) MUTATED" 
                   TCGA-FG-7634                    TCGA-FG-7636 
"AMP PEAK  1(1Q32.1) WILD-TYPE" "AMP PEAK  1(1Q32.1) WILD-TYPE" 
                   TCGA-FG-7638                    TCGA-FG-7643 
"AMP PEAK  1(1Q32.1) WILD-TYPE" "AMP PEAK  1(1Q32.1) WILD-TYPE" 
                   TCGA-FN-7833                    TCGA-HT-7467 
"AMP PEAK  1(1Q32.1) WILD-TYPE" "AMP PEAK  1(1Q32.1) WILD-TYPE" 
                   TCGA-HT-7468                    TCGA-HT-7470 
"AMP PEAK  1(1Q32.1) WILD-TYPE" "AMP PEAK  1(1Q32.1) WILD-TYPE" 
                   TCGA-HT-7472                    TCGA-HT-7473 
"AMP PEAK  1(1Q32.1) WILD-TYPE" "AMP PEAK  1(1Q32.1) WILD-TYPE" 
                   TCGA-HT-7474                    TCGA-HT-7475 
"AMP PEAK  1(1Q32.1) WILD-TYPE"   "AMP PEAK  1(1Q32.1) MUTATED" 
                   TCGA-HT-7476                    TCGA-HT-7478 
"AMP PEAK  1(1Q32.1) WILD-TYPE" "AMP PEAK  1(1Q32.1) WILD-TYPE" 
                   TCGA-HT-7479                    TCGA-HT-7480 
"AMP PEAK  1(1Q32.1) WILD-TYPE" "AMP PEAK  1(1Q32.1) WILD-TYPE" 
                   TCGA-HT-7481                    TCGA-HT-7482 
"AMP PEAK  1(1Q32.1) WILD-TYPE" "AMP PEAK  1(1Q32.1) WILD-TYPE" 
                   TCGA-HT-7483                    TCGA-HT-7485 
"AMP PEAK  1(1Q32.1) WILD-TYPE" "AMP PEAK  1(1Q32.1) WILD-TYPE" 
                   TCGA-HT-7601                    TCGA-HT-7602 
"AMP PEAK  1(1Q32.1) WILD-TYPE" "AMP PEAK  1(1Q32.1) WILD-TYPE" 
                   TCGA-HT-7603                    TCGA-HT-7604 
  "AMP PEAK  1(1Q32.1) MUTATED" "AMP PEAK  1(1Q32.1) WILD-TYPE" 
                   TCGA-HT-7605                    TCGA-HT-7606 
"AMP PEAK  1(1Q32.1) WILD-TYPE" "AMP PEAK  1(1Q32.1) WILD-TYPE" 
                   TCGA-HT-7607                    TCGA-HT-7608 
"AMP PEAK  1(1Q32.1) WILD-TYPE" "AMP PEAK  1(1Q32.1) WILD-TYPE" 
                   TCGA-HT-7609                    TCGA-HT-7610 
"AMP PEAK  1(1Q32.1) WILD-TYPE" "AMP PEAK  1(1Q32.1) WILD-TYPE" 
                   TCGA-HW-7486                    TCGA-HW-7487 
"AMP PEAK  1(1Q32.1) WILD-TYPE" "AMP PEAK  1(1Q32.1) WILD-TYPE" 
                   TCGA-HW-7489                    TCGA-HW-7490 
"AMP PEAK  1(1Q32.1) WILD-TYPE" "AMP PEAK  1(1Q32.1) WILD-TYPE" 
                   TCGA-HW-7491                    TCGA-HW-7493 
"AMP PEAK  1(1Q32.1) WILD-TYPE" "AMP PEAK  1(1Q32.1) WILD-TYPE" 
                   TCGA-HW-7495                    TCGA-IK-7675 
"AMP PEAK  1(1Q32.1) WILD-TYPE" "AMP PEAK  1(1Q32.1) WILD-TYPE" 
                   TCGA-IK-8125 
"AMP PEAK  1(1Q32.1) WILD-TYPE" 
                   TCGA-CS-4938                    TCGA-CS-4941 
"AMP PEAK  1(1Q32.1) WILD-TYPE"   "AMP PEAK  1(1Q32.1) MUTATED" 
                   TCGA-CS-4942                    TCGA-CS-4943 
"AMP PEAK  1(1Q32.1) WILD-TYPE" "AMP PEAK  1(1Q32.1) WILD-TYPE" 
                   TCGA-CS-4944                    TCGA-CS-5390 
"AMP PEAK  1(1Q32.1) WILD-TYPE" "AMP PEAK  1(1Q32.1) WILD-TYPE" 
                   TCGA-CS-5393                    TCGA-CS-5394 
"AMP PEAK  1(1Q32.1) WILD-TYPE" "AMP PEAK  1(1Q32.1) WILD-TYPE" 
                   TCGA-CS-5395                    TCGA-CS-5396 
  "AMP PEAK  1(1Q32.1) MUTATED" "AMP PEAK  1(1Q32.1) WILD-TYPE" 
                   TCGA-CS-5397                    TCGA-CS-6186 
  "AMP PEAK  1(1Q32.1) MUTATED" "AMP PEAK  1(1Q32.1) WILD-TYPE" 
                   TCGA-CS-6188                    TCGA-CS-6290 
"AMP PEAK  1(1Q32.1) WILD-TYPE" "AMP PEAK  1(1Q32.1) WILD-TYPE" 
                   TCGA-CS-6665                    TCGA-CS-6666 
  "AMP PEAK  1(1Q32.1) MUTATED" "AMP PEAK  1(1Q32.1) WILD-TYPE" 
                   TCGA-CS-6667                    TCGA-CS-6668 
"AMP PEAK  1(1Q32.1) WILD-TYPE" "AMP PEAK  1(1Q32.1) WILD-TYPE" 
                   TCGA-CS-6669                    TCGA-CS-6670 
"AMP PEAK  1(1Q32.1) WILD-TYPE" "AMP PEAK  1(1Q32.1) WILD-TYPE" 
                   TCGA-DB-5270                    TCGA-DB-5273 
"AMP PEAK  1(1Q32.1) WILD-TYPE" "AMP PEAK  1(1Q32.1) WILD-TYPE" 
                   TCGA-DB-5274                    TCGA-DB-5275 
"AMP PEAK  1(1Q32.1) WILD-TYPE" "AMP PEAK  1(1Q32.1) WILD-TYPE" 
                   TCGA-DB-5276                    TCGA-DB-5277 
"AMP PEAK  1(1Q32.1) WILD-TYPE"   "AMP PEAK  1(1Q32.1) MUTATED" 
                   TCGA-DB-5278                    TCGA-DB-5279 
"AMP PEAK  1(1Q32.1) WILD-TYPE" "AMP PEAK  1(1Q32.1) WILD-TYPE" 
                   TCGA-DB-5280                    TCGA-DB-5281 
"AMP PEAK  1(1Q32.1) WILD-TYPE" "AMP PEAK  1(1Q32.1) WILD-TYPE" 
                   TCGA-DH-5140                    TCGA-DH-5141 
"AMP PEAK  1(1Q32.1) WILD-TYPE" "AMP PEAK  1(1Q32.1) WILD-TYPE" 
                   TCGA-DH-5142                    TCGA-DH-5143 
"AMP PEAK  1(1Q32.1) WILD-TYPE" "AMP PEAK  1(1Q32.1) WILD-TYPE" 
                   TCGA-DH-5144                    TCGA-DU-5847 
"AMP PEAK  1(1Q32.1) WILD-TYPE" "AMP PEAK  1(1Q32.1) WILD-TYPE" 
                   TCGA-DU-5849                    TCGA-DU-5851 
"AMP PEAK  1(1Q32.1) WILD-TYPE" "AMP PEAK  1(1Q32.1) WILD-TYPE" 
                   TCGA-DU-5852                    TCGA-DU-5853 
"AMP PEAK  1(1Q32.1) WILD-TYPE" "AMP PEAK  1(1Q32.1) WILD-TYPE" 
                   TCGA-DU-5854                    TCGA-DU-5855 
"AMP PEAK  1(1Q32.1) WILD-TYPE" "AMP PEAK  1(1Q32.1) WILD-TYPE" 
                   TCGA-DU-5870                    TCGA-DU-5871 
"AMP PEAK  1(1Q32.1) WILD-TYPE" "AMP PEAK  1(1Q32.1) WILD-TYPE" 
                   TCGA-DU-5872                    TCGA-DU-5874 
"AMP PEAK  1(1Q32.1) WILD-TYPE" "AMP PEAK  1(1Q32.1) WILD-TYPE" 
                   TCGA-DU-6392                    TCGA-DU-6393 
  "AMP PEAK  1(1Q32.1) MUTATED" "AMP PEAK  1(1Q32.1) WILD-TYPE" 
                   TCGA-DU-6394                    TCGA-DU-6395 
"AMP PEAK  1(1Q32.1) WILD-TYPE" "AMP PEAK  1(1Q32.1) WILD-TYPE" 
                   TCGA-DU-6396                    TCGA-DU-6397 
"AMP PEAK  1(1Q32.1) WILD-TYPE" "AMP PEAK  1(1Q32.1) WILD-TYPE" 
                   TCGA-DU-6399                    TCGA-DU-6400 
"AMP PEAK  1(1Q32.1) WILD-TYPE"   "AMP PEAK  1(1Q32.1) MUTATED" 
                   TCGA-DU-6401                    TCGA-DU-6402 
"AMP PEAK  1(1Q32.1) WILD-TYPE" "AMP PEAK  1(1Q32.1) WILD-TYPE" 
                   TCGA-DU-6403                    TCGA-DU-6404 
  "AMP PEAK  1(1Q32.1) MUTATED" "AMP PEAK  1(1Q32.1) WILD-TYPE" 
                   TCGA-DU-6405                    TCGA-DU-6406 
"AMP PEAK  1(1Q32.1) WILD-TYPE" "AMP PEAK  1(1Q32.1) WILD-TYPE" 
                   TCGA-DU-6407                    TCGA-DU-6408 
"AMP PEAK  1(1Q32.1) WILD-TYPE" "AMP PEAK  1(1Q32.1) WILD-TYPE" 
                   TCGA-DU-6410                    TCGA-DU-6542 
"AMP PEAK  1(1Q32.1) WILD-TYPE" "AMP PEAK  1(1Q32.1) WILD-TYPE" 
                   TCGA-DU-7006                    TCGA-DU-7007 
"AMP PEAK  1(1Q32.1) WILD-TYPE" "AMP PEAK  1(1Q32.1) WILD-TYPE" 
                   TCGA-DU-7008                    TCGA-DU-7009 
"AMP PEAK  1(1Q32.1) WILD-TYPE" "AMP PEAK  1(1Q32.1) WILD-TYPE" 
                   TCGA-DU-7010                    TCGA-DU-7011 
  "AMP PEAK  1(1Q32.1) MUTATED" "AMP PEAK  1(1Q32.1) WILD-TYPE" 
                   TCGA-DU-7012                    TCGA-DU-7013 
"AMP PEAK  1(1Q32.1) WILD-TYPE" "AMP PEAK  1(1Q32.1) WILD-TYPE" 
                   TCGA-DU-7014                    TCGA-DU-7015 
"AMP PEAK  1(1Q32.1) WILD-TYPE"   "AMP PEAK  1(1Q32.1) MUTATED" 
                   TCGA-DU-7018                    TCGA-DU-7019 
"AMP PEAK  1(1Q32.1) WILD-TYPE" "AMP PEAK  1(1Q32.1) WILD-TYPE" 
                   TCGA-DU-7290                    TCGA-DU-7292 
  "AMP PEAK  1(1Q32.1) MUTATED"   "AMP PEAK  1(1Q32.1) MUTATED" 
                   TCGA-DU-7294                    TCGA-DU-7298 
"AMP PEAK  1(1Q32.1) WILD-TYPE" "AMP PEAK  1(1Q32.1) WILD-TYPE" 
                   TCGA-DU-7299                    TCGA-DU-7300 
"AMP PEAK  1(1Q32.1) WILD-TYPE" "AMP PEAK  1(1Q32.1) WILD-TYPE" 
                   TCGA-DU-7301                    TCGA-DU-7302 
"AMP PEAK  1(1Q32.1) WILD-TYPE" "AMP PEAK  1(1Q32.1) WILD-TYPE" 
                   TCGA-DU-7304                    TCGA-DU-7306 
  "AMP PEAK  1(1Q32.1) MUTATED" "AMP PEAK  1(1Q32.1) WILD-TYPE" 
                   TCGA-DU-7309                    TCGA-E1-5302 
"AMP PEAK  1(1Q32.1) WILD-TYPE" "AMP PEAK  1(1Q32.1) WILD-TYPE" 
                   TCGA-E1-5303                    TCGA-E1-5304 
"AMP PEAK  1(1Q32.1) WILD-TYPE" "AMP PEAK  1(1Q32.1) WILD-TYPE" 
                   TCGA-E1-5305                    TCGA-E1-5307 
"AMP PEAK  1(1Q32.1) WILD-TYPE" "AMP PEAK  1(1Q32.1) WILD-TYPE" 
                   TCGA-E1-5311                    TCGA-E1-5318 
"AMP PEAK  1(1Q32.1) WILD-TYPE" "AMP PEAK  1(1Q32.1) WILD-TYPE" 
                   TCGA-E1-5319                    TCGA-E1-5322 
"AMP PEAK  1(1Q32.1) WILD-TYPE" "AMP PEAK  1(1Q32.1) WILD-TYPE" 
                   TCGA-EZ-7264                    TCGA-FG-5962 
"AMP PEAK  1(1Q32.1) WILD-TYPE"   "AMP PEAK  1(1Q32.1) MUTATED" 
                   TCGA-FG-5963                    TCGA-FG-5964 
"AMP PEAK  1(1Q32.1) WILD-TYPE" "AMP PEAK  1(1Q32.1) WILD-TYPE" 
                   TCGA-FG-5965                    TCGA-FG-6688 
"AMP PEAK  1(1Q32.1) WILD-TYPE"   "AMP PEAK  1(1Q32.1) MUTATED" 
                   TCGA-FG-6689                    TCGA-FG-6690 
"AMP PEAK  1(1Q32.1) WILD-TYPE" "AMP PEAK  1(1Q32.1) WILD-TYPE" 
                   TCGA-FG-6691                    TCGA-FG-6692 
"AMP PEAK  1(1Q32.1) WILD-TYPE"   "AMP PEAK  1(1Q32.1) MUTATED" 
                   TCGA-FG-7634                    TCGA-FG-7636 
"AMP PEAK  1(1Q32.1) WILD-TYPE" "AMP PEAK  1(1Q32.1) WILD-TYPE" 
                   TCGA-FG-7638                    TCGA-FG-7643 
"AMP PEAK  1(1Q32.1) WILD-TYPE" "AMP PEAK  1(1Q32.1) WILD-TYPE" 
                   TCGA-FN-7833                    TCGA-HT-7467 
"AMP PEAK  1(1Q32.1) WILD-TYPE" "AMP PEAK  1(1Q32.1) WILD-TYPE" 
                   TCGA-HT-7468                    TCGA-HT-7470 
"AMP PEAK  1(1Q32.1) WILD-TYPE" "AMP PEAK  1(1Q32.1) WILD-TYPE" 
                   TCGA-HT-7472                    TCGA-HT-7473 
"AMP PEAK  1(1Q32.1) WILD-TYPE" "AMP PEAK  1(1Q32.1) WILD-TYPE" 
                   TCGA-HT-7474                    TCGA-HT-7475 
"AMP PEAK  1(1Q32.1) WILD-TYPE"   "AMP PEAK  1(1Q32.1) MUTATED" 
                   TCGA-HT-7476                    TCGA-HT-7478 
"AMP PEAK  1(1Q32.1) WILD-TYPE" "AMP PEAK  1(1Q32.1) WILD-TYPE" 
                   TCGA-HT-7479                    TCGA-HT-7480 
"AMP PEAK  1(1Q32.1) WILD-TYPE" "AMP PEAK  1(1Q32.1) WILD-TYPE" 
                   TCGA-HT-7481                    TCGA-HT-7482 
"AMP PEAK  1(1Q32.1) WILD-TYPE" "AMP PEAK  1(1Q32.1) WILD-TYPE" 
                   TCGA-HT-7483                    TCGA-HT-7485 
"AMP PEAK  1(1Q32.1) WILD-TYPE" "AMP PEAK  1(1Q32.1) WILD-TYPE" 
                   TCGA-HT-7601                    TCGA-HT-7602 
"AMP PEAK  1(1Q32.1) WILD-TYPE" "AMP PEAK  1(1Q32.1) WILD-TYPE" 
                   TCGA-HT-7603                    TCGA-HT-7604 
  "AMP PEAK  1(1Q32.1) MUTATED" "AMP PEAK  1(1Q32.1) WILD-TYPE" 
                   TCGA-HT-7605                    TCGA-HT-7606 
"AMP PEAK  1(1Q32.1) WILD-TYPE" "AMP PEAK  1(1Q32.1) WILD-TYPE" 
                   TCGA-HT-7607                    TCGA-HT-7608 
"AMP PEAK  1(1Q32.1) WILD-TYPE" "AMP PEAK  1(1Q32.1) WILD-TYPE" 
                   TCGA-HT-7609                    TCGA-HT-7610 
"AMP PEAK  1(1Q32.1) WILD-TYPE" "AMP PEAK  1(1Q32.1) WILD-TYPE" 
                   TCGA-HW-7486                    TCGA-HW-7487 
"AMP PEAK  1(1Q32.1) WILD-TYPE" "AMP PEAK  1(1Q32.1) WILD-TYPE" 
                   TCGA-HW-7489                    TCGA-HW-7490 
"AMP PEAK  1(1Q32.1) WILD-TYPE" "AMP PEAK  1(1Q32.1) WILD-TYPE" 
                   TCGA-HW-7491                    TCGA-HW-7493 
"AMP PEAK  1(1Q32.1) WILD-TYPE" "AMP PEAK  1(1Q32.1) WILD-TYPE" 
                   TCGA-HW-7495                    TCGA-IK-7675 
"AMP PEAK  1(1Q32.1) WILD-TYPE" "AMP PEAK  1(1Q32.1) WILD-TYPE" 
                   TCGA-IK-8125 
"AMP PEAK  1(1Q32.1) WILD-TYPE" 
                   TCGA-CS-4938                    TCGA-CS-4941 
"AMP PEAK  1(1Q32.1) WILD-TYPE"   "AMP PEAK  1(1Q32.1) MUTATED" 
                   TCGA-CS-4942                    TCGA-CS-4943 
"AMP PEAK  1(1Q32.1) WILD-TYPE" "AMP PEAK  1(1Q32.1) WILD-TYPE" 
                   TCGA-CS-4944                    TCGA-CS-5390 
"AMP PEAK  1(1Q32.1) WILD-TYPE" "AMP PEAK  1(1Q32.1) WILD-TYPE" 
                   TCGA-CS-5393                    TCGA-CS-5394 
"AMP PEAK  1(1Q32.1) WILD-TYPE" "AMP PEAK  1(1Q32.1) WILD-TYPE" 
                   TCGA-CS-5395                    TCGA-CS-5396 
  "AMP PEAK  1(1Q32.1) MUTATED" "AMP PEAK  1(1Q32.1) WILD-TYPE" 
                   TCGA-CS-5397                    TCGA-CS-6186 
  "AMP PEAK  1(1Q32.1) MUTATED" "AMP PEAK  1(1Q32.1) WILD-TYPE" 
                   TCGA-CS-6188                    TCGA-CS-6290 
"AMP PEAK  1(1Q32.1) WILD-TYPE" "AMP PEAK  1(1Q32.1) WILD-TYPE" 
                   TCGA-CS-6665                    TCGA-CS-6666 
  "AMP PEAK  1(1Q32.1) MUTATED" "AMP PEAK  1(1Q32.1) WILD-TYPE" 
                   TCGA-CS-6667                    TCGA-CS-6668 
"AMP PEAK  1(1Q32.1) WILD-TYPE" "AMP PEAK  1(1Q32.1) WILD-TYPE" 
                   TCGA-CS-6669                    TCGA-CS-6670 
"AMP PEAK  1(1Q32.1) WILD-TYPE" "AMP PEAK  1(1Q32.1) WILD-TYPE" 
                   TCGA-DB-5270                    TCGA-DB-5273 
"AMP PEAK  1(1Q32.1) WILD-TYPE" "AMP PEAK  1(1Q32.1) WILD-TYPE" 
                   TCGA-DB-5274                    TCGA-DB-5275 
"AMP PEAK  1(1Q32.1) WILD-TYPE" "AMP PEAK  1(1Q32.1) WILD-TYPE" 
                   TCGA-DB-5276                    TCGA-DB-5277 
"AMP PEAK  1(1Q32.1) WILD-TYPE"   "AMP PEAK  1(1Q32.1) MUTATED" 
                   TCGA-DB-5278                    TCGA-DB-5279 
"AMP PEAK  1(1Q32.1) WILD-TYPE" "AMP PEAK  1(1Q32.1) WILD-TYPE" 
                   TCGA-DB-5280                    TCGA-DB-5281 
"AMP PEAK  1(1Q32.1) WILD-TYPE" "AMP PEAK  1(1Q32.1) WILD-TYPE" 
                   TCGA-DH-5140                    TCGA-DH-5141 
"AMP PEAK  1(1Q32.1) WILD-TYPE" "AMP PEAK  1(1Q32.1) WILD-TYPE" 
                   TCGA-DH-5142                    TCGA-DH-5143 
"AMP PEAK  1(1Q32.1) WILD-TYPE" "AMP PEAK  1(1Q32.1) WILD-TYPE" 
                   TCGA-DH-5144                    TCGA-DU-5847 
"AMP PEAK  1(1Q32.1) WILD-TYPE" "AMP PEAK  1(1Q32.1) WILD-TYPE" 
                   TCGA-DU-5849                    TCGA-DU-5851 
"AMP PEAK  1(1Q32.1) WILD-TYPE" "AMP PEAK  1(1Q32.1) WILD-TYPE" 
                   TCGA-DU-5852                    TCGA-DU-5853 
"AMP PEAK  1(1Q32.1) WILD-TYPE" "AMP PEAK  1(1Q32.1) WILD-TYPE" 
                   TCGA-DU-5854                    TCGA-DU-5855 
"AMP PEAK  1(1Q32.1) WILD-TYPE" "AMP PEAK  1(1Q32.1) WILD-TYPE" 
                   TCGA-DU-5870                    TCGA-DU-5871 
"AMP PEAK  1(1Q32.1) WILD-TYPE" "AMP PEAK  1(1Q32.1) WILD-TYPE" 
                   TCGA-DU-5872                    TCGA-DU-5874 
"AMP PEAK  1(1Q32.1) WILD-TYPE" "AMP PEAK  1(1Q32.1) WILD-TYPE" 
                   TCGA-DU-6392                    TCGA-DU-6393 
  "AMP PEAK  1(1Q32.1) MUTATED" "AMP PEAK  1(1Q32.1) WILD-TYPE" 
                   TCGA-DU-6394                    TCGA-DU-6395 
"AMP PEAK  1(1Q32.1) WILD-TYPE" "AMP PEAK  1(1Q32.1) WILD-TYPE" 
                   TCGA-DU-6396                    TCGA-DU-6397 
"AMP PEAK  1(1Q32.1) WILD-TYPE" "AMP PEAK  1(1Q32.1) WILD-TYPE" 
                   TCGA-DU-6399                    TCGA-DU-6400 
"AMP PEAK  1(1Q32.1) WILD-TYPE"   "AMP PEAK  1(1Q32.1) MUTATED" 
                   TCGA-DU-6401                    TCGA-DU-6402 
"AMP PEAK  1(1Q32.1) WILD-TYPE" "AMP PEAK  1(1Q32.1) WILD-TYPE" 
                   TCGA-DU-6403                    TCGA-DU-6404 
  "AMP PEAK  1(1Q32.1) MUTATED" "AMP PEAK  1(1Q32.1) WILD-TYPE" 
                   TCGA-DU-6405                    TCGA-DU-6406 
"AMP PEAK  1(1Q32.1) WILD-TYPE" "AMP PEAK  1(1Q32.1) WILD-TYPE" 
                   TCGA-DU-6407                    TCGA-DU-6408 
"AMP PEAK  1(1Q32.1) WILD-TYPE" "AMP PEAK  1(1Q32.1) WILD-TYPE" 
                   TCGA-DU-6410                    TCGA-DU-6542 
"AMP PEAK  1(1Q32.1) WILD-TYPE" "AMP PEAK  1(1Q32.1) WILD-TYPE" 
                   TCGA-DU-7006                    TCGA-DU-7007 
"AMP PEAK  1(1Q32.1) WILD-TYPE" "AMP PEAK  1(1Q32.1) WILD-TYPE" 
                   TCGA-DU-7008                    TCGA-DU-7009 
"AMP PEAK  1(1Q32.1) WILD-TYPE" "AMP PEAK  1(1Q32.1) WILD-TYPE" 
                   TCGA-DU-7010                    TCGA-DU-7011 
  "AMP PEAK  1(1Q32.1) MUTATED" "AMP PEAK  1(1Q32.1) WILD-TYPE" 
                   TCGA-DU-7012                    TCGA-DU-7013 
"AMP PEAK  1(1Q32.1) WILD-TYPE" "AMP PEAK  1(1Q32.1) WILD-TYPE" 
                   TCGA-DU-7014                    TCGA-DU-7015 
"AMP PEAK  1(1Q32.1) WILD-TYPE"   "AMP PEAK  1(1Q32.1) MUTATED" 
                   TCGA-DU-7018                    TCGA-DU-7019 
"AMP PEAK  1(1Q32.1) WILD-TYPE" "AMP PEAK  1(1Q32.1) WILD-TYPE" 
                   TCGA-DU-7290                    TCGA-DU-7292 
  "AMP PEAK  1(1Q32.1) MUTATED"   "AMP PEAK  1(1Q32.1) MUTATED" 
                   TCGA-DU-7294                    TCGA-DU-7298 
"AMP PEAK  1(1Q32.1) WILD-TYPE" "AMP PEAK  1(1Q32.1) WILD-TYPE" 
                   TCGA-DU-7299                    TCGA-DU-7300 
"AMP PEAK  1(1Q32.1) WILD-TYPE" "AMP PEAK  1(1Q32.1) WILD-TYPE" 
                   TCGA-DU-7301                    TCGA-DU-7302 
"AMP PEAK  1(1Q32.1) WILD-TYPE" "AMP PEAK  1(1Q32.1) WILD-TYPE" 
                   TCGA-DU-7304                    TCGA-DU-7306 
  "AMP PEAK  1(1Q32.1) MUTATED" "AMP PEAK  1(1Q32.1) WILD-TYPE" 
                   TCGA-DU-7309                    TCGA-E1-5302 
"AMP PEAK  1(1Q32.1) WILD-TYPE" "AMP PEAK  1(1Q32.1) WILD-TYPE" 
                   TCGA-E1-5303                    TCGA-E1-5304 
"AMP PEAK  1(1Q32.1) WILD-TYPE" "AMP PEAK  1(1Q32.1) WILD-TYPE" 
                   TCGA-E1-5305                    TCGA-E1-5307 
"AMP PEAK  1(1Q32.1) WILD-TYPE" "AMP PEAK  1(1Q32.1) WILD-TYPE" 
                   TCGA-E1-5311                    TCGA-E1-5318 
"AMP PEAK  1(1Q32.1) WILD-TYPE" "AMP PEAK  1(1Q32.1) WILD-TYPE" 
                   TCGA-E1-5319                    TCGA-E1-5322 
"AMP PEAK  1(1Q32.1) WILD-TYPE" "AMP PEAK  1(1Q32.1) WILD-TYPE" 
                   TCGA-EZ-7264                    TCGA-FG-5962 
"AMP PEAK  1(1Q32.1) WILD-TYPE"   "AMP PEAK  1(1Q32.1) MUTATED" 
                   TCGA-FG-5963                    TCGA-FG-5964 
"AMP PEAK  1(1Q32.1) WILD-TYPE" "AMP PEAK  1(1Q32.1) WILD-TYPE" 
                   TCGA-FG-5965                    TCGA-FG-6688 
"AMP PEAK  1(1Q32.1) WILD-TYPE"   "AMP PEAK  1(1Q32.1) MUTATED" 
                   TCGA-FG-6689                    TCGA-FG-6690 
"AMP PEAK  1(1Q32.1) WILD-TYPE" "AMP PEAK  1(1Q32.1) WILD-TYPE" 
                   TCGA-FG-6691                    TCGA-FG-6692 
"AMP PEAK  1(1Q32.1) WILD-TYPE"   "AMP PEAK  1(1Q32.1) MUTATED" 
                   TCGA-FG-7634                    TCGA-FG-7636 
"AMP PEAK  1(1Q32.1) WILD-TYPE" "AMP PEAK  1(1Q32.1) WILD-TYPE" 
                   TCGA-FG-7638                    TCGA-FG-7643 
"AMP PEAK  1(1Q32.1) WILD-TYPE" "AMP PEAK  1(1Q32.1) WILD-TYPE" 
                   TCGA-FN-7833                    TCGA-HT-7467 
"AMP PEAK  1(1Q32.1) WILD-TYPE" "AMP PEAK  1(1Q32.1) WILD-TYPE" 
                   TCGA-HT-7468                    TCGA-HT-7470 
"AMP PEAK  1(1Q32.1) WILD-TYPE" "AMP PEAK  1(1Q32.1) WILD-TYPE" 
                   TCGA-HT-7472                    TCGA-HT-7473 
"AMP PEAK  1(1Q32.1) WILD-TYPE" "AMP PEAK  1(1Q32.1) WILD-TYPE" 
                   TCGA-HT-7474                    TCGA-HT-7475 
"AMP PEAK  1(1Q32.1) WILD-TYPE"   "AMP PEAK  1(1Q32.1) MUTATED" 
                   TCGA-HT-7476                    TCGA-HT-7478 
"AMP PEAK  1(1Q32.1) WILD-TYPE" "AMP PEAK  1(1Q32.1) WILD-TYPE" 
                   TCGA-HT-7479                    TCGA-HT-7480 
"AMP PEAK  1(1Q32.1) WILD-TYPE" "AMP PEAK  1(1Q32.1) WILD-TYPE" 
                   TCGA-HT-7481                    TCGA-HT-7482 
"AMP PEAK  1(1Q32.1) WILD-TYPE" "AMP PEAK  1(1Q32.1) WILD-TYPE" 
                   TCGA-HT-7483                    TCGA-HT-7485 
"AMP PEAK  1(1Q32.1) WILD-TYPE" "AMP PEAK  1(1Q32.1) WILD-TYPE" 
                   TCGA-HT-7601                    TCGA-HT-7602 
"AMP PEAK  1(1Q32.1) WILD-TYPE" "AMP PEAK  1(1Q32.1) WILD-TYPE" 
                   TCGA-HT-7603                    TCGA-HT-7604 
  "AMP PEAK  1(1Q32.1) MUTATED" "AMP PEAK  1(1Q32.1) WILD-TYPE" 
                   TCGA-HT-7605                    TCGA-HT-7606 
"AMP PEAK  1(1Q32.1) WILD-TYPE" "AMP PEAK  1(1Q32.1) WILD-TYPE" 
                   TCGA-HT-7607                    TCGA-HT-7608 
"AMP PEAK  1(1Q32.1) WILD-TYPE" "AMP PEAK  1(1Q32.1) WILD-TYPE" 
                   TCGA-HT-7609                    TCGA-HT-7610 
"AMP PEAK  1(1Q32.1) WILD-TYPE" "AMP PEAK  1(1Q32.1) WILD-TYPE" 
                   TCGA-HW-7486                    TCGA-HW-7487 
"AMP PEAK  1(1Q32.1) WILD-TYPE" "AMP PEAK  1(1Q32.1) WILD-TYPE" 
                   TCGA-HW-7489                    TCGA-HW-7490 
"AMP PEAK  1(1Q32.1) WILD-TYPE" "AMP PEAK  1(1Q32.1) WILD-TYPE" 
                   TCGA-HW-7491                    TCGA-HW-7493 
"AMP PEAK  1(1Q32.1) WILD-TYPE" "AMP PEAK  1(1Q32.1) WILD-TYPE" 
                   TCGA-HW-7495                    TCGA-IK-7675 
"AMP PEAK  1(1Q32.1) WILD-TYPE" "AMP PEAK  1(1Q32.1) WILD-TYPE" 
                   TCGA-IK-8125 
"AMP PEAK  1(1Q32.1) WILD-TYPE" 
[1] "hr=" "2.2"
D1V2, continuous
D1V3, binary
[1] "tbl2"
                               cls
clus                            [,1] [,2]
  AMP PEAK  1(1Q32.1) MUTATED      9    9
  AMP PEAK  1(1Q32.1) WILD-TYPE   53   74
        clus
vv       AMP PEAK  1(1Q32.1) MUTATED AMP PEAK  1(1Q32.1) WILD-TYPE
  FEMALE                           9                            53
  MALE                             9                            74
D1V4, continuous
D1V5, multiclass
                   clus
vv                  AMP PEAK  1(1Q32.1) MUTATED AMP PEAK  1(1Q32.1) WILD-TYPE
  ASTROCYTOMA                                 9                            41
  OLIGOASTROCYTOMA                            3                            33
  OLIGODENDROGLIOMA                           6                            52
D1V6, binary
[1] "tbl2"
                               cls
clus                            [,1] [,2]
  AMP PEAK  1(1Q32.1) MUTATED      5   13
  AMP PEAK  1(1Q32.1) WILD-TYPE   54   73
     clus
vv    AMP PEAK  1(1Q32.1) MUTATED AMP PEAK  1(1Q32.1) WILD-TYPE
  NO                           13                            73
  YES                           5                            54
D1V7, binary
[1] "tbl2"
                               cls
clus                            [,1] [,2]
  AMP PEAK  1(1Q32.1) MUTATED      7   11
  AMP PEAK  1(1Q32.1) WILD-TYPE   67   60
     clus
vv    AMP PEAK  1(1Q32.1) MUTATED AMP PEAK  1(1Q32.1) WILD-TYPE
  NO                           11                            60
  YES                           7                            67

Clustering(2) Variable = Amp Peak  2(4q12) mutation analysis
D2V1, survival
                 TCGA-CS-4938                  TCGA-CS-4941 
"AMP PEAK  2(4Q12) WILD-TYPE" "AMP PEAK  2(4Q12) WILD-TYPE" 
                 TCGA-CS-4942                  TCGA-CS-4943 
"AMP PEAK  2(4Q12) WILD-TYPE"   "AMP PEAK  2(4Q12) MUTATED" 
                 TCGA-CS-4944                  TCGA-CS-5390 
"AMP PEAK  2(4Q12) WILD-TYPE" "AMP PEAK  2(4Q12) WILD-TYPE" 
                 TCGA-CS-5393                  TCGA-CS-5394 
"AMP PEAK  2(4Q12) WILD-TYPE" "AMP PEAK  2(4Q12) WILD-TYPE" 
                 TCGA-CS-5395                  TCGA-CS-5396 
"AMP PEAK  2(4Q12) WILD-TYPE" "AMP PEAK  2(4Q12) WILD-TYPE" 
                 TCGA-CS-5397                  TCGA-CS-6186 
"AMP PEAK  2(4Q12) WILD-TYPE" "AMP PEAK  2(4Q12) WILD-TYPE" 
                 TCGA-CS-6188                  TCGA-CS-6290 
"AMP PEAK  2(4Q12) WILD-TYPE" "AMP PEAK  2(4Q12) WILD-TYPE" 
                 TCGA-CS-6665                  TCGA-CS-6666 
  "AMP PEAK  2(4Q12) MUTATED"   "AMP PEAK  2(4Q12) MUTATED" 
                 TCGA-CS-6667                  TCGA-CS-6668 
"AMP PEAK  2(4Q12) WILD-TYPE" "AMP PEAK  2(4Q12) WILD-TYPE" 
                 TCGA-CS-6669                  TCGA-CS-6670 
"AMP PEAK  2(4Q12) WILD-TYPE" "AMP PEAK  2(4Q12) WILD-TYPE" 
                 TCGA-DB-5270                  TCGA-DB-5273 
"AMP PEAK  2(4Q12) WILD-TYPE" "AMP PEAK  2(4Q12) WILD-TYPE" 
                 TCGA-DB-5274                  TCGA-DB-5275 
"AMP PEAK  2(4Q12) WILD-TYPE" "AMP PEAK  2(4Q12) WILD-TYPE" 
                 TCGA-DB-5276                  TCGA-DB-5277 
"AMP PEAK  2(4Q12) WILD-TYPE"   "AMP PEAK  2(4Q12) MUTATED" 
                 TCGA-DB-5278                  TCGA-DB-5279 
"AMP PEAK  2(4Q12) WILD-TYPE" "AMP PEAK  2(4Q12) WILD-TYPE" 
                 TCGA-DB-5280                  TCGA-DB-5281 
"AMP PEAK  2(4Q12) WILD-TYPE" "AMP PEAK  2(4Q12) WILD-TYPE" 
                 TCGA-DH-5140                  TCGA-DH-5141 
"AMP PEAK  2(4Q12) WILD-TYPE" "AMP PEAK  2(4Q12) WILD-TYPE" 
                 TCGA-DH-5142                  TCGA-DH-5143 
"AMP PEAK  2(4Q12) WILD-TYPE" "AMP PEAK  2(4Q12) WILD-TYPE" 
                 TCGA-DH-5144                  TCGA-DU-5847 
"AMP PEAK  2(4Q12) WILD-TYPE" "AMP PEAK  2(4Q12) WILD-TYPE" 
                 TCGA-DU-5849                  TCGA-DU-5851 
"AMP PEAK  2(4Q12) WILD-TYPE" "AMP PEAK  2(4Q12) WILD-TYPE" 
                 TCGA-DU-5852                  TCGA-DU-5853 
"AMP PEAK  2(4Q12) WILD-TYPE" "AMP PEAK  2(4Q12) WILD-TYPE" 
                 TCGA-DU-5854                  TCGA-DU-5855 
"AMP PEAK  2(4Q12) WILD-TYPE" "AMP PEAK  2(4Q12) WILD-TYPE" 
                 TCGA-DU-5870                  TCGA-DU-5871 
"AMP PEAK  2(4Q12) WILD-TYPE" "AMP PEAK  2(4Q12) WILD-TYPE" 
                 TCGA-DU-5872                  TCGA-DU-5874 
"AMP PEAK  2(4Q12) WILD-TYPE" "AMP PEAK  2(4Q12) WILD-TYPE" 
                 TCGA-DU-6392                  TCGA-DU-6393 
"AMP PEAK  2(4Q12) WILD-TYPE" "AMP PEAK  2(4Q12) WILD-TYPE" 
                 TCGA-DU-6394                  TCGA-DU-6395 
"AMP PEAK  2(4Q12) WILD-TYPE" "AMP PEAK  2(4Q12) WILD-TYPE" 
                 TCGA-DU-6396                  TCGA-DU-6397 
"AMP PEAK  2(4Q12) WILD-TYPE" "AMP PEAK  2(4Q12) WILD-TYPE" 
                 TCGA-DU-6399                  TCGA-DU-6400 
"AMP PEAK  2(4Q12) WILD-TYPE" "AMP PEAK  2(4Q12) WILD-TYPE" 
                 TCGA-DU-6401                  TCGA-DU-6402 
"AMP PEAK  2(4Q12) WILD-TYPE" "AMP PEAK  2(4Q12) WILD-TYPE" 
                 TCGA-DU-6403                  TCGA-DU-6404 
"AMP PEAK  2(4Q12) WILD-TYPE" "AMP PEAK  2(4Q12) WILD-TYPE" 
                 TCGA-DU-6405                  TCGA-DU-6406 
"AMP PEAK  2(4Q12) WILD-TYPE" "AMP PEAK  2(4Q12) WILD-TYPE" 
                 TCGA-DU-6407                  TCGA-DU-6408 
"AMP PEAK  2(4Q12) WILD-TYPE" "AMP PEAK  2(4Q12) WILD-TYPE" 
                 TCGA-DU-6410                  TCGA-DU-6542 
"AMP PEAK  2(4Q12) WILD-TYPE" "AMP PEAK  2(4Q12) WILD-TYPE" 
                 TCGA-DU-7006                  TCGA-DU-7007 
"AMP PEAK  2(4Q12) WILD-TYPE" "AMP PEAK  2(4Q12) WILD-TYPE" 
                 TCGA-DU-7008                  TCGA-DU-7009 
"AMP PEAK  2(4Q12) WILD-TYPE" "AMP PEAK  2(4Q12) WILD-TYPE" 
                 TCGA-DU-7010                  TCGA-DU-7011 
  "AMP PEAK  2(4Q12) MUTATED" "AMP PEAK  2(4Q12) WILD-TYPE" 
                 TCGA-DU-7012                  TCGA-DU-7013 
"AMP PEAK  2(4Q12) WILD-TYPE" "AMP PEAK  2(4Q12) WILD-TYPE" 
                 TCGA-DU-7014                  TCGA-DU-7015 
"AMP PEAK  2(4Q12) WILD-TYPE" "AMP PEAK  2(4Q12) WILD-TYPE" 
                 TCGA-DU-7018                  TCGA-DU-7019 
"AMP PEAK  2(4Q12) WILD-TYPE" "AMP PEAK  2(4Q12) WILD-TYPE" 
                 TCGA-DU-7290                  TCGA-DU-7292 
"AMP PEAK  2(4Q12) WILD-TYPE" "AMP PEAK  2(4Q12) WILD-TYPE" 
                 TCGA-DU-7294                  TCGA-DU-7298 
"AMP PEAK  2(4Q12) WILD-TYPE" "AMP PEAK  2(4Q12) WILD-TYPE" 
                 TCGA-DU-7299                  TCGA-DU-7300 
"AMP PEAK  2(4Q12) WILD-TYPE" "AMP PEAK  2(4Q12) WILD-TYPE" 
                 TCGA-DU-7301                  TCGA-DU-7302 
"AMP PEAK  2(4Q12) WILD-TYPE"   "AMP PEAK  2(4Q12) MUTATED" 
                 TCGA-DU-7304                  TCGA-DU-7306 
"AMP PEAK  2(4Q12) WILD-TYPE" "AMP PEAK  2(4Q12) WILD-TYPE" 
                 TCGA-DU-7309                  TCGA-E1-5302 
  "AMP PEAK  2(4Q12) MUTATED" "AMP PEAK  2(4Q12) WILD-TYPE" 
                 TCGA-E1-5303                  TCGA-E1-5304 
"AMP PEAK  2(4Q12) WILD-TYPE" "AMP PEAK  2(4Q12) WILD-TYPE" 
                 TCGA-E1-5305                  TCGA-E1-5307 
"AMP PEAK  2(4Q12) WILD-TYPE"   "AMP PEAK  2(4Q12) MUTATED" 
                 TCGA-E1-5311                  TCGA-E1-5318 
"AMP PEAK  2(4Q12) WILD-TYPE" "AMP PEAK  2(4Q12) WILD-TYPE" 
                 TCGA-E1-5319                  TCGA-E1-5322 
"AMP PEAK  2(4Q12) WILD-TYPE" "AMP PEAK  2(4Q12) WILD-TYPE" 
                 TCGA-EZ-7264                  TCGA-FG-5962 
"AMP PEAK  2(4Q12) WILD-TYPE" "AMP PEAK  2(4Q12) WILD-TYPE" 
                 TCGA-FG-5963                  TCGA-FG-5964 
"AMP PEAK  2(4Q12) WILD-TYPE" "AMP PEAK  2(4Q12) WILD-TYPE" 
                 TCGA-FG-5965                  TCGA-FG-6688 
"AMP PEAK  2(4Q12) WILD-TYPE" "AMP PEAK  2(4Q12) WILD-TYPE" 
                 TCGA-FG-6689                  TCGA-FG-6690 
"AMP PEAK  2(4Q12) WILD-TYPE" "AMP PEAK  2(4Q12) WILD-TYPE" 
                 TCGA-FG-6691                  TCGA-FG-6692 
"AMP PEAK  2(4Q12) WILD-TYPE" "AMP PEAK  2(4Q12) WILD-TYPE" 
                 TCGA-FG-7634                  TCGA-FG-7636 
"AMP PEAK  2(4Q12) WILD-TYPE" "AMP PEAK  2(4Q12) WILD-TYPE" 
                 TCGA-FG-7638                  TCGA-FG-7643 
"AMP PEAK  2(4Q12) WILD-TYPE" "AMP PEAK  2(4Q12) WILD-TYPE" 
                 TCGA-FN-7833                  TCGA-HT-7467 
"AMP PEAK  2(4Q12) WILD-TYPE" "AMP PEAK  2(4Q12) WILD-TYPE" 
                 TCGA-HT-7468                  TCGA-HT-7470 
"AMP PEAK  2(4Q12) WILD-TYPE" "AMP PEAK  2(4Q12) WILD-TYPE" 
                 TCGA-HT-7472                  TCGA-HT-7473 
"AMP PEAK  2(4Q12) WILD-TYPE" "AMP PEAK  2(4Q12) WILD-TYPE" 
                 TCGA-HT-7474                  TCGA-HT-7475 
"AMP PEAK  2(4Q12) WILD-TYPE" "AMP PEAK  2(4Q12) WILD-TYPE" 
                 TCGA-HT-7476                  TCGA-HT-7478 
"AMP PEAK  2(4Q12) WILD-TYPE" "AMP PEAK  2(4Q12) WILD-TYPE" 
                 TCGA-HT-7479                  TCGA-HT-7480 
"AMP PEAK  2(4Q12) WILD-TYPE" "AMP PEAK  2(4Q12) WILD-TYPE" 
                 TCGA-HT-7481                  TCGA-HT-7482 
"AMP PEAK  2(4Q12) WILD-TYPE" "AMP PEAK  2(4Q12) WILD-TYPE" 
                 TCGA-HT-7483                  TCGA-HT-7485 
"AMP PEAK  2(4Q12) WILD-TYPE" "AMP PEAK  2(4Q12) WILD-TYPE" 
                 TCGA-HT-7601                  TCGA-HT-7602 
"AMP PEAK  2(4Q12) WILD-TYPE" "AMP PEAK  2(4Q12) WILD-TYPE" 
                 TCGA-HT-7603                  TCGA-HT-7604 
"AMP PEAK  2(4Q12) WILD-TYPE" "AMP PEAK  2(4Q12) WILD-TYPE" 
                 TCGA-HT-7605                  TCGA-HT-7606 
"AMP PEAK  2(4Q12) WILD-TYPE" "AMP PEAK  2(4Q12) WILD-TYPE" 
                 TCGA-HT-7607                  TCGA-HT-7608 
"AMP PEAK  2(4Q12) WILD-TYPE" "AMP PEAK  2(4Q12) WILD-TYPE" 
                 TCGA-HT-7609                  TCGA-HT-7610 
"AMP PEAK  2(4Q12) WILD-TYPE" "AMP PEAK  2(4Q12) WILD-TYPE" 
                 TCGA-HW-7486                  TCGA-HW-7487 
"AMP PEAK  2(4Q12) WILD-TYPE" "AMP PEAK  2(4Q12) WILD-TYPE" 
                 TCGA-HW-7489                  TCGA-HW-7490 
"AMP PEAK  2(4Q12) WILD-TYPE" "AMP PEAK  2(4Q12) WILD-TYPE" 
                 TCGA-HW-7491                  TCGA-HW-7493 
"AMP PEAK  2(4Q12) WILD-TYPE" "AMP PEAK  2(4Q12) WILD-TYPE" 
                 TCGA-HW-7495                  TCGA-IK-7675 
"AMP PEAK  2(4Q12) WILD-TYPE" "AMP PEAK  2(4Q12) WILD-TYPE" 
                 TCGA-IK-8125 
"AMP PEAK  2(4Q12) WILD-TYPE" 
                 TCGA-CS-4938                  TCGA-CS-4941 
"AMP PEAK  2(4Q12) WILD-TYPE" "AMP PEAK  2(4Q12) WILD-TYPE" 
                 TCGA-CS-4942                  TCGA-CS-4943 
"AMP PEAK  2(4Q12) WILD-TYPE"   "AMP PEAK  2(4Q12) MUTATED" 
                 TCGA-CS-4944                  TCGA-CS-5390 
"AMP PEAK  2(4Q12) WILD-TYPE" "AMP PEAK  2(4Q12) WILD-TYPE" 
                 TCGA-CS-5393                  TCGA-CS-5394 
"AMP PEAK  2(4Q12) WILD-TYPE" "AMP PEAK  2(4Q12) WILD-TYPE" 
                 TCGA-CS-5395                  TCGA-CS-5396 
"AMP PEAK  2(4Q12) WILD-TYPE" "AMP PEAK  2(4Q12) WILD-TYPE" 
                 TCGA-CS-5397                  TCGA-CS-6186 
"AMP PEAK  2(4Q12) WILD-TYPE" "AMP PEAK  2(4Q12) WILD-TYPE" 
                 TCGA-CS-6188                  TCGA-CS-6290 
"AMP PEAK  2(4Q12) WILD-TYPE" "AMP PEAK  2(4Q12) WILD-TYPE" 
                 TCGA-CS-6665                  TCGA-CS-6666 
  "AMP PEAK  2(4Q12) MUTATED"   "AMP PEAK  2(4Q12) MUTATED" 
                 TCGA-CS-6667                  TCGA-CS-6668 
"AMP PEAK  2(4Q12) WILD-TYPE" "AMP PEAK  2(4Q12) WILD-TYPE" 
                 TCGA-CS-6669                  TCGA-CS-6670 
"AMP PEAK  2(4Q12) WILD-TYPE" "AMP PEAK  2(4Q12) WILD-TYPE" 
                 TCGA-DB-5270                  TCGA-DB-5273 
"AMP PEAK  2(4Q12) WILD-TYPE" "AMP PEAK  2(4Q12) WILD-TYPE" 
                 TCGA-DB-5274                  TCGA-DB-5275 
"AMP PEAK  2(4Q12) WILD-TYPE" "AMP PEAK  2(4Q12) WILD-TYPE" 
                 TCGA-DB-5276                  TCGA-DB-5277 
"AMP PEAK  2(4Q12) WILD-TYPE"   "AMP PEAK  2(4Q12) MUTATED" 
                 TCGA-DB-5278                  TCGA-DB-5279 
"AMP PEAK  2(4Q12) WILD-TYPE" "AMP PEAK  2(4Q12) WILD-TYPE" 
                 TCGA-DB-5280                  TCGA-DB-5281 
"AMP PEAK  2(4Q12) WILD-TYPE" "AMP PEAK  2(4Q12) WILD-TYPE" 
                 TCGA-DH-5140                  TCGA-DH-5141 
"AMP PEAK  2(4Q12) WILD-TYPE" "AMP PEAK  2(4Q12) WILD-TYPE" 
                 TCGA-DH-5142                  TCGA-DH-5143 
"AMP PEAK  2(4Q12) WILD-TYPE" "AMP PEAK  2(4Q12) WILD-TYPE" 
                 TCGA-DH-5144                  TCGA-DU-5847 
"AMP PEAK  2(4Q12) WILD-TYPE" "AMP PEAK  2(4Q12) WILD-TYPE" 
                 TCGA-DU-5849                  TCGA-DU-5851 
"AMP PEAK  2(4Q12) WILD-TYPE" "AMP PEAK  2(4Q12) WILD-TYPE" 
                 TCGA-DU-5852                  TCGA-DU-5853 
"AMP PEAK  2(4Q12) WILD-TYPE" "AMP PEAK  2(4Q12) WILD-TYPE" 
                 TCGA-DU-5854                  TCGA-DU-5855 
"AMP PEAK  2(4Q12) WILD-TYPE" "AMP PEAK  2(4Q12) WILD-TYPE" 
                 TCGA-DU-5870                  TCGA-DU-5871 
"AMP PEAK  2(4Q12) WILD-TYPE" "AMP PEAK  2(4Q12) WILD-TYPE" 
                 TCGA-DU-5872                  TCGA-DU-5874 
"AMP PEAK  2(4Q12) WILD-TYPE" "AMP PEAK  2(4Q12) WILD-TYPE" 
                 TCGA-DU-6392                  TCGA-DU-6393 
"AMP PEAK  2(4Q12) WILD-TYPE" "AMP PEAK  2(4Q12) WILD-TYPE" 
                 TCGA-DU-6394                  TCGA-DU-6395 
"AMP PEAK  2(4Q12) WILD-TYPE" "AMP PEAK  2(4Q12) WILD-TYPE" 
                 TCGA-DU-6396                  TCGA-DU-6397 
"AMP PEAK  2(4Q12) WILD-TYPE" "AMP PEAK  2(4Q12) WILD-TYPE" 
                 TCGA-DU-6399                  TCGA-DU-6400 
"AMP PEAK  2(4Q12) WILD-TYPE" "AMP PEAK  2(4Q12) WILD-TYPE" 
                 TCGA-DU-6401                  TCGA-DU-6402 
"AMP PEAK  2(4Q12) WILD-TYPE" "AMP PEAK  2(4Q12) WILD-TYPE" 
                 TCGA-DU-6403                  TCGA-DU-6404 
"AMP PEAK  2(4Q12) WILD-TYPE" "AMP PEAK  2(4Q12) WILD-TYPE" 
                 TCGA-DU-6405                  TCGA-DU-6406 
"AMP PEAK  2(4Q12) WILD-TYPE" "AMP PEAK  2(4Q12) WILD-TYPE" 
                 TCGA-DU-6407                  TCGA-DU-6408 
"AMP PEAK  2(4Q12) WILD-TYPE" "AMP PEAK  2(4Q12) WILD-TYPE" 
                 TCGA-DU-6410                  TCGA-DU-6542 
"AMP PEAK  2(4Q12) WILD-TYPE" "AMP PEAK  2(4Q12) WILD-TYPE" 
                 TCGA-DU-7006                  TCGA-DU-7007 
"AMP PEAK  2(4Q12) WILD-TYPE" "AMP PEAK  2(4Q12) WILD-TYPE" 
                 TCGA-DU-7008                  TCGA-DU-7009 
"AMP PEAK  2(4Q12) WILD-TYPE" "AMP PEAK  2(4Q12) WILD-TYPE" 
                 TCGA-DU-7010                  TCGA-DU-7011 
  "AMP PEAK  2(4Q12) MUTATED" "AMP PEAK  2(4Q12) WILD-TYPE" 
                 TCGA-DU-7012                  TCGA-DU-7013 
"AMP PEAK  2(4Q12) WILD-TYPE" "AMP PEAK  2(4Q12) WILD-TYPE" 
                 TCGA-DU-7014                  TCGA-DU-7015 
"AMP PEAK  2(4Q12) WILD-TYPE" "AMP PEAK  2(4Q12) WILD-TYPE" 
                 TCGA-DU-7018                  TCGA-DU-7019 
"AMP PEAK  2(4Q12) WILD-TYPE" "AMP PEAK  2(4Q12) WILD-TYPE" 
                 TCGA-DU-7290                  TCGA-DU-7292 
"AMP PEAK  2(4Q12) WILD-TYPE" "AMP PEAK  2(4Q12) WILD-TYPE" 
                 TCGA-DU-7294                  TCGA-DU-7298 
"AMP PEAK  2(4Q12) WILD-TYPE" "AMP PEAK  2(4Q12) WILD-TYPE" 
                 TCGA-DU-7299                  TCGA-DU-7300 
"AMP PEAK  2(4Q12) WILD-TYPE" "AMP PEAK  2(4Q12) WILD-TYPE" 
                 TCGA-DU-7301                  TCGA-DU-7302 
"AMP PEAK  2(4Q12) WILD-TYPE"   "AMP PEAK  2(4Q12) MUTATED" 
                 TCGA-DU-7304                  TCGA-DU-7306 
"AMP PEAK  2(4Q12) WILD-TYPE" "AMP PEAK  2(4Q12) WILD-TYPE" 
                 TCGA-DU-7309                  TCGA-E1-5302 
  "AMP PEAK  2(4Q12) MUTATED" "AMP PEAK  2(4Q12) WILD-TYPE" 
                 TCGA-E1-5303                  TCGA-E1-5304 
"AMP PEAK  2(4Q12) WILD-TYPE" "AMP PEAK  2(4Q12) WILD-TYPE" 
                 TCGA-E1-5305                  TCGA-E1-5307 
"AMP PEAK  2(4Q12) WILD-TYPE"   "AMP PEAK  2(4Q12) MUTATED" 
                 TCGA-E1-5311                  TCGA-E1-5318 
"AMP PEAK  2(4Q12) WILD-TYPE" "AMP PEAK  2(4Q12) WILD-TYPE" 
                 TCGA-E1-5319                  TCGA-E1-5322 
"AMP PEAK  2(4Q12) WILD-TYPE" "AMP PEAK  2(4Q12) WILD-TYPE" 
                 TCGA-EZ-7264                  TCGA-FG-5962 
"AMP PEAK  2(4Q12) WILD-TYPE" "AMP PEAK  2(4Q12) WILD-TYPE" 
                 TCGA-FG-5963                  TCGA-FG-5964 
"AMP PEAK  2(4Q12) WILD-TYPE" "AMP PEAK  2(4Q12) WILD-TYPE" 
                 TCGA-FG-5965                  TCGA-FG-6688 
"AMP PEAK  2(4Q12) WILD-TYPE" "AMP PEAK  2(4Q12) WILD-TYPE" 
                 TCGA-FG-6689                  TCGA-FG-6690 
"AMP PEAK  2(4Q12) WILD-TYPE" "AMP PEAK  2(4Q12) WILD-TYPE" 
                 TCGA-FG-6691                  TCGA-FG-6692 
"AMP PEAK  2(4Q12) WILD-TYPE" "AMP PEAK  2(4Q12) WILD-TYPE" 
                 TCGA-FG-7634                  TCGA-FG-7636 
"AMP PEAK  2(4Q12) WILD-TYPE" "AMP PEAK  2(4Q12) WILD-TYPE" 
                 TCGA-FG-7638                  TCGA-FG-7643 
"AMP PEAK  2(4Q12) WILD-TYPE" "AMP PEAK  2(4Q12) WILD-TYPE" 
                 TCGA-FN-7833                  TCGA-HT-7467 
"AMP PEAK  2(4Q12) WILD-TYPE" "AMP PEAK  2(4Q12) WILD-TYPE" 
                 TCGA-HT-7468                  TCGA-HT-7470 
"AMP PEAK  2(4Q12) WILD-TYPE" "AMP PEAK  2(4Q12) WILD-TYPE" 
                 TCGA-HT-7472                  TCGA-HT-7473 
"AMP PEAK  2(4Q12) WILD-TYPE" "AMP PEAK  2(4Q12) WILD-TYPE" 
                 TCGA-HT-7474                  TCGA-HT-7475 
"AMP PEAK  2(4Q12) WILD-TYPE" "AMP PEAK  2(4Q12) WILD-TYPE" 
                 TCGA-HT-7476                  TCGA-HT-7478 
"AMP PEAK  2(4Q12) WILD-TYPE" "AMP PEAK  2(4Q12) WILD-TYPE" 
                 TCGA-HT-7479                  TCGA-HT-7480 
"AMP PEAK  2(4Q12) WILD-TYPE" "AMP PEAK  2(4Q12) WILD-TYPE" 
                 TCGA-HT-7481                  TCGA-HT-7482 
"AMP PEAK  2(4Q12) WILD-TYPE" "AMP PEAK  2(4Q12) WILD-TYPE" 
                 TCGA-HT-7483                  TCGA-HT-7485 
"AMP PEAK  2(4Q12) WILD-TYPE" "AMP PEAK  2(4Q12) WILD-TYPE" 
                 TCGA-HT-7601                  TCGA-HT-7602 
"AMP PEAK  2(4Q12) WILD-TYPE" "AMP PEAK  2(4Q12) WILD-TYPE" 
                 TCGA-HT-7603                  TCGA-HT-7604 
"AMP PEAK  2(4Q12) WILD-TYPE" "AMP PEAK  2(4Q12) WILD-TYPE" 
                 TCGA-HT-7605                  TCGA-HT-7606 
"AMP PEAK  2(4Q12) WILD-TYPE" "AMP PEAK  2(4Q12) WILD-TYPE" 
                 TCGA-HT-7607                  TCGA-HT-7608 
"AMP PEAK  2(4Q12) WILD-TYPE" "AMP PEAK  2(4Q12) WILD-TYPE" 
                 TCGA-HT-7609                  TCGA-HT-7610 
"AMP PEAK  2(4Q12) WILD-TYPE" "AMP PEAK  2(4Q12) WILD-TYPE" 
                 TCGA-HW-7486                  TCGA-HW-7487 
"AMP PEAK  2(4Q12) WILD-TYPE" "AMP PEAK  2(4Q12) WILD-TYPE" 
                 TCGA-HW-7489                  TCGA-HW-7490 
"AMP PEAK  2(4Q12) WILD-TYPE" "AMP PEAK  2(4Q12) WILD-TYPE" 
                 TCGA-HW-7491                  TCGA-HW-7493 
"AMP PEAK  2(4Q12) WILD-TYPE" "AMP PEAK  2(4Q12) WILD-TYPE" 
                 TCGA-HW-7495                  TCGA-IK-7675 
"AMP PEAK  2(4Q12) WILD-TYPE" "AMP PEAK  2(4Q12) WILD-TYPE" 
                 TCGA-IK-8125 
"AMP PEAK  2(4Q12) WILD-TYPE" 
                 TCGA-CS-4938                  TCGA-CS-4941 
"AMP PEAK  2(4Q12) WILD-TYPE" "AMP PEAK  2(4Q12) WILD-TYPE" 
                 TCGA-CS-4942                  TCGA-CS-4943 
"AMP PEAK  2(4Q12) WILD-TYPE"   "AMP PEAK  2(4Q12) MUTATED" 
                 TCGA-CS-4944                  TCGA-CS-5390 
"AMP PEAK  2(4Q12) WILD-TYPE" "AMP PEAK  2(4Q12) WILD-TYPE" 
                 TCGA-CS-5393                  TCGA-CS-5394 
"AMP PEAK  2(4Q12) WILD-TYPE" "AMP PEAK  2(4Q12) WILD-TYPE" 
                 TCGA-CS-5395                  TCGA-CS-5396 
"AMP PEAK  2(4Q12) WILD-TYPE" "AMP PEAK  2(4Q12) WILD-TYPE" 
                 TCGA-CS-5397                  TCGA-CS-6186 
"AMP PEAK  2(4Q12) WILD-TYPE" "AMP PEAK  2(4Q12) WILD-TYPE" 
                 TCGA-CS-6188                  TCGA-CS-6290 
"AMP PEAK  2(4Q12) WILD-TYPE" "AMP PEAK  2(4Q12) WILD-TYPE" 
                 TCGA-CS-6665                  TCGA-CS-6666 
  "AMP PEAK  2(4Q12) MUTATED"   "AMP PEAK  2(4Q12) MUTATED" 
                 TCGA-CS-6667                  TCGA-CS-6668 
"AMP PEAK  2(4Q12) WILD-TYPE" "AMP PEAK  2(4Q12) WILD-TYPE" 
                 TCGA-CS-6669                  TCGA-CS-6670 
"AMP PEAK  2(4Q12) WILD-TYPE" "AMP PEAK  2(4Q12) WILD-TYPE" 
                 TCGA-DB-5270                  TCGA-DB-5273 
"AMP PEAK  2(4Q12) WILD-TYPE" "AMP PEAK  2(4Q12) WILD-TYPE" 
                 TCGA-DB-5274                  TCGA-DB-5275 
"AMP PEAK  2(4Q12) WILD-TYPE" "AMP PEAK  2(4Q12) WILD-TYPE" 
                 TCGA-DB-5276                  TCGA-DB-5277 
"AMP PEAK  2(4Q12) WILD-TYPE"   "AMP PEAK  2(4Q12) MUTATED" 
                 TCGA-DB-5278                  TCGA-DB-5279 
"AMP PEAK  2(4Q12) WILD-TYPE" "AMP PEAK  2(4Q12) WILD-TYPE" 
                 TCGA-DB-5280                  TCGA-DB-5281 
"AMP PEAK  2(4Q12) WILD-TYPE" "AMP PEAK  2(4Q12) WILD-TYPE" 
                 TCGA-DH-5140                  TCGA-DH-5141 
"AMP PEAK  2(4Q12) WILD-TYPE" "AMP PEAK  2(4Q12) WILD-TYPE" 
                 TCGA-DH-5142                  TCGA-DH-5143 
"AMP PEAK  2(4Q12) WILD-TYPE" "AMP PEAK  2(4Q12) WILD-TYPE" 
                 TCGA-DH-5144                  TCGA-DU-5847 
"AMP PEAK  2(4Q12) WILD-TYPE" "AMP PEAK  2(4Q12) WILD-TYPE" 
                 TCGA-DU-5849                  TCGA-DU-5851 
"AMP PEAK  2(4Q12) WILD-TYPE" "AMP PEAK  2(4Q12) WILD-TYPE" 
                 TCGA-DU-5852                  TCGA-DU-5853 
"AMP PEAK  2(4Q12) WILD-TYPE" "AMP PEAK  2(4Q12) WILD-TYPE" 
                 TCGA-DU-5854                  TCGA-DU-5855 
"AMP PEAK  2(4Q12) WILD-TYPE" "AMP PEAK  2(4Q12) WILD-TYPE" 
                 TCGA-DU-5870                  TCGA-DU-5871 
"AMP PEAK  2(4Q12) WILD-TYPE" "AMP PEAK  2(4Q12) WILD-TYPE" 
                 TCGA-DU-5872                  TCGA-DU-5874 
"AMP PEAK  2(4Q12) WILD-TYPE" "AMP PEAK  2(4Q12) WILD-TYPE" 
                 TCGA-DU-6392                  TCGA-DU-6393 
"AMP PEAK  2(4Q12) WILD-TYPE" "AMP PEAK  2(4Q12) WILD-TYPE" 
                 TCGA-DU-6394                  TCGA-DU-6395 
"AMP PEAK  2(4Q12) WILD-TYPE" "AMP PEAK  2(4Q12) WILD-TYPE" 
                 TCGA-DU-6396                  TCGA-DU-6397 
"AMP PEAK  2(4Q12) WILD-TYPE" "AMP PEAK  2(4Q12) WILD-TYPE" 
                 TCGA-DU-6399                  TCGA-DU-6400 
"AMP PEAK  2(4Q12) WILD-TYPE" "AMP PEAK  2(4Q12) WILD-TYPE" 
                 TCGA-DU-6401                  TCGA-DU-6402 
"AMP PEAK  2(4Q12) WILD-TYPE" "AMP PEAK  2(4Q12) WILD-TYPE" 
                 TCGA-DU-6403                  TCGA-DU-6404 
"AMP PEAK  2(4Q12) WILD-TYPE" "AMP PEAK  2(4Q12) WILD-TYPE" 
                 TCGA-DU-6405                  TCGA-DU-6406 
"AMP PEAK  2(4Q12) WILD-TYPE" "AMP PEAK  2(4Q12) WILD-TYPE" 
                 TCGA-DU-6407                  TCGA-DU-6408 
"AMP PEAK  2(4Q12) WILD-TYPE" "AMP PEAK  2(4Q12) WILD-TYPE" 
                 TCGA-DU-6410                  TCGA-DU-6542 
"AMP PEAK  2(4Q12) WILD-TYPE" "AMP PEAK  2(4Q12) WILD-TYPE" 
                 TCGA-DU-7006                  TCGA-DU-7007 
"AMP PEAK  2(4Q12) WILD-TYPE" "AMP PEAK  2(4Q12) WILD-TYPE" 
                 TCGA-DU-7008                  TCGA-DU-7009 
"AMP PEAK  2(4Q12) WILD-TYPE" "AMP PEAK  2(4Q12) WILD-TYPE" 
                 TCGA-DU-7010                  TCGA-DU-7011 
  "AMP PEAK  2(4Q12) MUTATED" "AMP PEAK  2(4Q12) WILD-TYPE" 
                 TCGA-DU-7012                  TCGA-DU-7013 
"AMP PEAK  2(4Q12) WILD-TYPE" "AMP PEAK  2(4Q12) WILD-TYPE" 
                 TCGA-DU-7014                  TCGA-DU-7015 
"AMP PEAK  2(4Q12) WILD-TYPE" "AMP PEAK  2(4Q12) WILD-TYPE" 
                 TCGA-DU-7018                  TCGA-DU-7019 
"AMP PEAK  2(4Q12) WILD-TYPE" "AMP PEAK  2(4Q12) WILD-TYPE" 
                 TCGA-DU-7290                  TCGA-DU-7292 
"AMP PEAK  2(4Q12) WILD-TYPE" "AMP PEAK  2(4Q12) WILD-TYPE" 
                 TCGA-DU-7294                  TCGA-DU-7298 
"AMP PEAK  2(4Q12) WILD-TYPE" "AMP PEAK  2(4Q12) WILD-TYPE" 
                 TCGA-DU-7299                  TCGA-DU-7300 
"AMP PEAK  2(4Q12) WILD-TYPE" "AMP PEAK  2(4Q12) WILD-TYPE" 
                 TCGA-DU-7301                  TCGA-DU-7302 
"AMP PEAK  2(4Q12) WILD-TYPE"   "AMP PEAK  2(4Q12) MUTATED" 
                 TCGA-DU-7304                  TCGA-DU-7306 
"AMP PEAK  2(4Q12) WILD-TYPE" "AMP PEAK  2(4Q12) WILD-TYPE" 
                 TCGA-DU-7309                  TCGA-E1-5302 
  "AMP PEAK  2(4Q12) MUTATED" "AMP PEAK  2(4Q12) WILD-TYPE" 
                 TCGA-E1-5303                  TCGA-E1-5304 
"AMP PEAK  2(4Q12) WILD-TYPE" "AMP PEAK  2(4Q12) WILD-TYPE" 
                 TCGA-E1-5305                  TCGA-E1-5307 
"AMP PEAK  2(4Q12) WILD-TYPE"   "AMP PEAK  2(4Q12) MUTATED" 
                 TCGA-E1-5311                  TCGA-E1-5318 
"AMP PEAK  2(4Q12) WILD-TYPE" "AMP PEAK  2(4Q12) WILD-TYPE" 
                 TCGA-E1-5319                  TCGA-E1-5322 
"AMP PEAK  2(4Q12) WILD-TYPE" "AMP PEAK  2(4Q12) WILD-TYPE" 
                 TCGA-EZ-7264                  TCGA-FG-5962 
"AMP PEAK  2(4Q12) WILD-TYPE" "AMP PEAK  2(4Q12) WILD-TYPE" 
                 TCGA-FG-5963                  TCGA-FG-5964 
"AMP PEAK  2(4Q12) WILD-TYPE" "AMP PEAK  2(4Q12) WILD-TYPE" 
                 TCGA-FG-5965                  TCGA-FG-6688 
"AMP PEAK  2(4Q12) WILD-TYPE" "AMP PEAK  2(4Q12) WILD-TYPE" 
                 TCGA-FG-6689                  TCGA-FG-6690 
"AMP PEAK  2(4Q12) WILD-TYPE" "AMP PEAK  2(4Q12) WILD-TYPE" 
                 TCGA-FG-6691                  TCGA-FG-6692 
"AMP PEAK  2(4Q12) WILD-TYPE" "AMP PEAK  2(4Q12) WILD-TYPE" 
                 TCGA-FG-7634                  TCGA-FG-7636 
"AMP PEAK  2(4Q12) WILD-TYPE" "AMP PEAK  2(4Q12) WILD-TYPE" 
                 TCGA-FG-7638                  TCGA-FG-7643 
"AMP PEAK  2(4Q12) WILD-TYPE" "AMP PEAK  2(4Q12) WILD-TYPE" 
                 TCGA-FN-7833                  TCGA-HT-7467 
"AMP PEAK  2(4Q12) WILD-TYPE" "AMP PEAK  2(4Q12) WILD-TYPE" 
                 TCGA-HT-7468                  TCGA-HT-7470 
"AMP PEAK  2(4Q12) WILD-TYPE" "AMP PEAK  2(4Q12) WILD-TYPE" 
                 TCGA-HT-7472                  TCGA-HT-7473 
"AMP PEAK  2(4Q12) WILD-TYPE" "AMP PEAK  2(4Q12) WILD-TYPE" 
                 TCGA-HT-7474                  TCGA-HT-7475 
"AMP PEAK  2(4Q12) WILD-TYPE" "AMP PEAK  2(4Q12) WILD-TYPE" 
                 TCGA-HT-7476                  TCGA-HT-7478 
"AMP PEAK  2(4Q12) WILD-TYPE" "AMP PEAK  2(4Q12) WILD-TYPE" 
                 TCGA-HT-7479                  TCGA-HT-7480 
"AMP PEAK  2(4Q12) WILD-TYPE" "AMP PEAK  2(4Q12) WILD-TYPE" 
                 TCGA-HT-7481                  TCGA-HT-7482 
"AMP PEAK  2(4Q12) WILD-TYPE" "AMP PEAK  2(4Q12) WILD-TYPE" 
                 TCGA-HT-7483                  TCGA-HT-7485 
"AMP PEAK  2(4Q12) WILD-TYPE" "AMP PEAK  2(4Q12) WILD-TYPE" 
                 TCGA-HT-7601                  TCGA-HT-7602 
"AMP PEAK  2(4Q12) WILD-TYPE" "AMP PEAK  2(4Q12) WILD-TYPE" 
                 TCGA-HT-7603                  TCGA-HT-7604 
"AMP PEAK  2(4Q12) WILD-TYPE" "AMP PEAK  2(4Q12) WILD-TYPE" 
                 TCGA-HT-7605                  TCGA-HT-7606 
"AMP PEAK  2(4Q12) WILD-TYPE" "AMP PEAK  2(4Q12) WILD-TYPE" 
                 TCGA-HT-7607                  TCGA-HT-7608 
"AMP PEAK  2(4Q12) WILD-TYPE" "AMP PEAK  2(4Q12) WILD-TYPE" 
                 TCGA-HT-7609                  TCGA-HT-7610 
"AMP PEAK  2(4Q12) WILD-TYPE" "AMP PEAK  2(4Q12) WILD-TYPE" 
                 TCGA-HW-7486                  TCGA-HW-7487 
"AMP PEAK  2(4Q12) WILD-TYPE" "AMP PEAK  2(4Q12) WILD-TYPE" 
                 TCGA-HW-7489                  TCGA-HW-7490 
"AMP PEAK  2(4Q12) WILD-TYPE" "AMP PEAK  2(4Q12) WILD-TYPE" 
                 TCGA-HW-7491                  TCGA-HW-7493 
"AMP PEAK  2(4Q12) WILD-TYPE" "AMP PEAK  2(4Q12) WILD-TYPE" 
                 TCGA-HW-7495                  TCGA-IK-7675 
"AMP PEAK  2(4Q12) WILD-TYPE" "AMP PEAK  2(4Q12) WILD-TYPE" 
                 TCGA-IK-8125 
"AMP PEAK  2(4Q12) WILD-TYPE" 
[1] "hr=" "1.1"
D2V2, continuous
D2V3, binary
[1] "tbl2"
                             cls
clus                          [,1] [,2]
  AMP PEAK  2(4Q12) MUTATED      5    3
  AMP PEAK  2(4Q12) WILD-TYPE   57   80
        clus
vv       AMP PEAK  2(4Q12) MUTATED AMP PEAK  2(4Q12) WILD-TYPE
  FEMALE                         5                          57
  MALE                           3                          80
D2V4, continuous
D2V5, multiclass
                   clus
vv                  AMP PEAK  2(4Q12) MUTATED AMP PEAK  2(4Q12) WILD-TYPE
  ASTROCYTOMA                               6                          44
  OLIGOASTROCYTOMA                          0                          36
  OLIGODENDROGLIOMA                         2                          56
D2V6, binary
[1] "tbl2"
                             cls
clus                          [,1] [,2]
  AMP PEAK  2(4Q12) MUTATED      3    5
  AMP PEAK  2(4Q12) WILD-TYPE   56   81
     clus
vv    AMP PEAK  2(4Q12) MUTATED AMP PEAK  2(4Q12) WILD-TYPE
  NO                          5                          81
  YES                         3                          56
D2V7, binary
[1] "tbl2"
                             cls
clus                          [,1] [,2]
  AMP PEAK  2(4Q12) MUTATED      0    8
  AMP PEAK  2(4Q12) WILD-TYPE   74   63
     clus
vv    AMP PEAK  2(4Q12) MUTATED AMP PEAK  2(4Q12) WILD-TYPE
  NO                          8                          63
  YES                         0                          74

Clustering(3) Variable = Amp Peak  3(7p11.2) mutation analysis
D3V1, survival
                   TCGA-CS-4938                    TCGA-CS-4941 
"AMP PEAK  3(7P11.2) WILD-TYPE"   "AMP PEAK  3(7P11.2) MUTATED" 
                   TCGA-CS-4942                    TCGA-CS-4943 
  "AMP PEAK  3(7P11.2) MUTATED" "AMP PEAK  3(7P11.2) WILD-TYPE" 
                   TCGA-CS-4944                    TCGA-CS-5390 
"AMP PEAK  3(7P11.2) WILD-TYPE" "AMP PEAK  3(7P11.2) WILD-TYPE" 
                   TCGA-CS-5393                    TCGA-CS-5394 
  "AMP PEAK  3(7P11.2) MUTATED" "AMP PEAK  3(7P11.2) WILD-TYPE" 
                   TCGA-CS-5395                    TCGA-CS-5396 
  "AMP PEAK  3(7P11.2) MUTATED"   "AMP PEAK  3(7P11.2) MUTATED" 
                   TCGA-CS-5397                    TCGA-CS-6186 
  "AMP PEAK  3(7P11.2) MUTATED"   "AMP PEAK  3(7P11.2) MUTATED" 
                   TCGA-CS-6188                    TCGA-CS-6290 
  "AMP PEAK  3(7P11.2) MUTATED" "AMP PEAK  3(7P11.2) WILD-TYPE" 
                   TCGA-CS-6665                    TCGA-CS-6666 
  "AMP PEAK  3(7P11.2) MUTATED" "AMP PEAK  3(7P11.2) WILD-TYPE" 
                   TCGA-CS-6667                    TCGA-CS-6668 
"AMP PEAK  3(7P11.2) WILD-TYPE" "AMP PEAK  3(7P11.2) WILD-TYPE" 
                   TCGA-CS-6669                    TCGA-CS-6670 
"AMP PEAK  3(7P11.2) WILD-TYPE"   "AMP PEAK  3(7P11.2) MUTATED" 
                   TCGA-DB-5270                    TCGA-DB-5273 
  "AMP PEAK  3(7P11.2) MUTATED" "AMP PEAK  3(7P11.2) WILD-TYPE" 
                   TCGA-DB-5274                    TCGA-DB-5275 
"AMP PEAK  3(7P11.2) WILD-TYPE" "AMP PEAK  3(7P11.2) WILD-TYPE" 
                   TCGA-DB-5276                    TCGA-DB-5277 
"AMP PEAK  3(7P11.2) WILD-TYPE" "AMP PEAK  3(7P11.2) WILD-TYPE" 
                   TCGA-DB-5278                    TCGA-DB-5279 
"AMP PEAK  3(7P11.2) WILD-TYPE" "AMP PEAK  3(7P11.2) WILD-TYPE" 
                   TCGA-DB-5280                    TCGA-DB-5281 
"AMP PEAK  3(7P11.2) WILD-TYPE" "AMP PEAK  3(7P11.2) WILD-TYPE" 
                   TCGA-DH-5140                    TCGA-DH-5141 
"AMP PEAK  3(7P11.2) WILD-TYPE" "AMP PEAK  3(7P11.2) WILD-TYPE" 
                   TCGA-DH-5142                    TCGA-DH-5143 
  "AMP PEAK  3(7P11.2) MUTATED" "AMP PEAK  3(7P11.2) WILD-TYPE" 
                   TCGA-DH-5144                    TCGA-DU-5847 
"AMP PEAK  3(7P11.2) WILD-TYPE" "AMP PEAK  3(7P11.2) WILD-TYPE" 
                   TCGA-DU-5849                    TCGA-DU-5851 
"AMP PEAK  3(7P11.2) WILD-TYPE" "AMP PEAK  3(7P11.2) WILD-TYPE" 
                   TCGA-DU-5852                    TCGA-DU-5853 
  "AMP PEAK  3(7P11.2) MUTATED" "AMP PEAK  3(7P11.2) WILD-TYPE" 
                   TCGA-DU-5854                    TCGA-DU-5855 
  "AMP PEAK  3(7P11.2) MUTATED" "AMP PEAK  3(7P11.2) WILD-TYPE" 
                   TCGA-DU-5870                    TCGA-DU-5871 
"AMP PEAK  3(7P11.2) WILD-TYPE" "AMP PEAK  3(7P11.2) WILD-TYPE" 
                   TCGA-DU-5872                    TCGA-DU-5874 
"AMP PEAK  3(7P11.2) WILD-TYPE" "AMP PEAK  3(7P11.2) WILD-TYPE" 
                   TCGA-DU-6392                    TCGA-DU-6393 
  "AMP PEAK  3(7P11.2) MUTATED" "AMP PEAK  3(7P11.2) WILD-TYPE" 
                   TCGA-DU-6394                    TCGA-DU-6395 
"AMP PEAK  3(7P11.2) WILD-TYPE"   "AMP PEAK  3(7P11.2) MUTATED" 
                   TCGA-DU-6396                    TCGA-DU-6397 
"AMP PEAK  3(7P11.2) WILD-TYPE" "AMP PEAK  3(7P11.2) WILD-TYPE" 
                   TCGA-DU-6399                    TCGA-DU-6400 
"AMP PEAK  3(7P11.2) WILD-TYPE"   "AMP PEAK  3(7P11.2) MUTATED" 
                   TCGA-DU-6401                    TCGA-DU-6402 
"AMP PEAK  3(7P11.2) WILD-TYPE"   "AMP PEAK  3(7P11.2) MUTATED" 
                   TCGA-DU-6403                    TCGA-DU-6404 
  "AMP PEAK  3(7P11.2) MUTATED"   "AMP PEAK  3(7P11.2) MUTATED" 
                   TCGA-DU-6405                    TCGA-DU-6406 
  "AMP PEAK  3(7P11.2) MUTATED"   "AMP PEAK  3(7P11.2) MUTATED" 
                   TCGA-DU-6407                    TCGA-DU-6408 
  "AMP PEAK  3(7P11.2) MUTATED" "AMP PEAK  3(7P11.2) WILD-TYPE" 
                   TCGA-DU-6410                    TCGA-DU-6542 
  "AMP PEAK  3(7P11.2) MUTATED" "AMP PEAK  3(7P11.2) WILD-TYPE" 
                   TCGA-DU-7006                    TCGA-DU-7007 
  "AMP PEAK  3(7P11.2) MUTATED" "AMP PEAK  3(7P11.2) WILD-TYPE" 
                   TCGA-DU-7008                    TCGA-DU-7009 
"AMP PEAK  3(7P11.2) WILD-TYPE" "AMP PEAK  3(7P11.2) WILD-TYPE" 
                   TCGA-DU-7010                    TCGA-DU-7011 
"AMP PEAK  3(7P11.2) WILD-TYPE"   "AMP PEAK  3(7P11.2) MUTATED" 
                   TCGA-DU-7012                    TCGA-DU-7013 
  "AMP PEAK  3(7P11.2) MUTATED"   "AMP PEAK  3(7P11.2) MUTATED" 
                   TCGA-DU-7014                    TCGA-DU-7015 
  "AMP PEAK  3(7P11.2) MUTATED"   "AMP PEAK  3(7P11.2) MUTATED" 
                   TCGA-DU-7018                    TCGA-DU-7019 
"AMP PEAK  3(7P11.2) WILD-TYPE" "AMP PEAK  3(7P11.2) WILD-TYPE" 
                   TCGA-DU-7290                    TCGA-DU-7292 
"AMP PEAK  3(7P11.2) WILD-TYPE"   "AMP PEAK  3(7P11.2) MUTATED" 
                   TCGA-DU-7294                    TCGA-DU-7298 
"AMP PEAK  3(7P11.2) WILD-TYPE" "AMP PEAK  3(7P11.2) WILD-TYPE" 
                   TCGA-DU-7299                    TCGA-DU-7300 
"AMP PEAK  3(7P11.2) WILD-TYPE" "AMP PEAK  3(7P11.2) WILD-TYPE" 
                   TCGA-DU-7301                    TCGA-DU-7302 
"AMP PEAK  3(7P11.2) WILD-TYPE" "AMP PEAK  3(7P11.2) WILD-TYPE" 
                   TCGA-DU-7304                    TCGA-DU-7306 
"AMP PEAK  3(7P11.2) WILD-TYPE" "AMP PEAK  3(7P11.2) WILD-TYPE" 
                   TCGA-DU-7309                    TCGA-E1-5302 
"AMP PEAK  3(7P11.2) WILD-TYPE" "AMP PEAK  3(7P11.2) WILD-TYPE" 
                   TCGA-E1-5303                    TCGA-E1-5304 
"AMP PEAK  3(7P11.2) WILD-TYPE"   "AMP PEAK  3(7P11.2) MUTATED" 
                   TCGA-E1-5305                    TCGA-E1-5307 
"AMP PEAK  3(7P11.2) WILD-TYPE" "AMP PEAK  3(7P11.2) WILD-TYPE" 
                   TCGA-E1-5311                    TCGA-E1-5318 
"AMP PEAK  3(7P11.2) WILD-TYPE" "AMP PEAK  3(7P11.2) WILD-TYPE" 
                   TCGA-E1-5319                    TCGA-E1-5322 
"AMP PEAK  3(7P11.2) WILD-TYPE"   "AMP PEAK  3(7P11.2) MUTATED" 
                   TCGA-EZ-7264                    TCGA-FG-5962 
"AMP PEAK  3(7P11.2) WILD-TYPE"   "AMP PEAK  3(7P11.2) MUTATED" 
                   TCGA-FG-5963                    TCGA-FG-5964 
"AMP PEAK  3(7P11.2) WILD-TYPE" "AMP PEAK  3(7P11.2) WILD-TYPE" 
                   TCGA-FG-5965                    TCGA-FG-6688 
"AMP PEAK  3(7P11.2) WILD-TYPE"   "AMP PEAK  3(7P11.2) MUTATED" 
                   TCGA-FG-6689                    TCGA-FG-6690 
"AMP PEAK  3(7P11.2) WILD-TYPE" "AMP PEAK  3(7P11.2) WILD-TYPE" 
                   TCGA-FG-6691                    TCGA-FG-6692 
  "AMP PEAK  3(7P11.2) MUTATED"   "AMP PEAK  3(7P11.2) MUTATED" 
                   TCGA-FG-7634                    TCGA-FG-7636 
  "AMP PEAK  3(7P11.2) MUTATED" "AMP PEAK  3(7P11.2) WILD-TYPE" 
                   TCGA-FG-7638                    TCGA-FG-7643 
"AMP PEAK  3(7P11.2) WILD-TYPE"   "AMP PEAK  3(7P11.2) MUTATED" 
                   TCGA-FN-7833                    TCGA-HT-7467 
"AMP PEAK  3(7P11.2) WILD-TYPE" "AMP PEAK  3(7P11.2) WILD-TYPE" 
                   TCGA-HT-7468                    TCGA-HT-7470 
"AMP PEAK  3(7P11.2) WILD-TYPE" "AMP PEAK  3(7P11.2) WILD-TYPE" 
                   TCGA-HT-7472                    TCGA-HT-7473 
"AMP PEAK  3(7P11.2) WILD-TYPE"   "AMP PEAK  3(7P11.2) MUTATED" 
                   TCGA-HT-7474                    TCGA-HT-7475 
"AMP PEAK  3(7P11.2) WILD-TYPE" "AMP PEAK  3(7P11.2) WILD-TYPE" 
                   TCGA-HT-7476                    TCGA-HT-7478 
"AMP PEAK  3(7P11.2) WILD-TYPE" "AMP PEAK  3(7P11.2) WILD-TYPE" 
                   TCGA-HT-7479                    TCGA-HT-7480 
"AMP PEAK  3(7P11.2) WILD-TYPE" "AMP PEAK  3(7P11.2) WILD-TYPE" 
                   TCGA-HT-7481                    TCGA-HT-7482 
"AMP PEAK  3(7P11.2) WILD-TYPE" "AMP PEAK  3(7P11.2) WILD-TYPE" 
                   TCGA-HT-7483                    TCGA-HT-7485 
"AMP PEAK  3(7P11.2) WILD-TYPE" "AMP PEAK  3(7P11.2) WILD-TYPE" 
                   TCGA-HT-7601                    TCGA-HT-7602 
"AMP PEAK  3(7P11.2) WILD-TYPE" "AMP PEAK  3(7P11.2) WILD-TYPE" 
                   TCGA-HT-7603                    TCGA-HT-7604 
"AMP PEAK  3(7P11.2) WILD-TYPE" "AMP PEAK  3(7P11.2) WILD-TYPE" 
                   TCGA-HT-7605                    TCGA-HT-7606 
"AMP PEAK  3(7P11.2) WILD-TYPE" "AMP PEAK  3(7P11.2) WILD-TYPE" 
                   TCGA-HT-7607                    TCGA-HT-7608 
"AMP PEAK  3(7P11.2) WILD-TYPE" "AMP PEAK  3(7P11.2) WILD-TYPE" 
                   TCGA-HT-7609                    TCGA-HT-7610 
"AMP PEAK  3(7P11.2) WILD-TYPE" "AMP PEAK  3(7P11.2) WILD-TYPE" 
                   TCGA-HW-7486                    TCGA-HW-7487 
"AMP PEAK  3(7P11.2) WILD-TYPE" "AMP PEAK  3(7P11.2) WILD-TYPE" 
                   TCGA-HW-7489                    TCGA-HW-7490 
"AMP PEAK  3(7P11.2) WILD-TYPE" "AMP PEAK  3(7P11.2) WILD-TYPE" 
                   TCGA-HW-7491                    TCGA-HW-7493 
"AMP PEAK  3(7P11.2) WILD-TYPE" "AMP PEAK  3(7P11.2) WILD-TYPE" 
                   TCGA-HW-7495                    TCGA-IK-7675 
"AMP PEAK  3(7P11.2) WILD-TYPE" "AMP PEAK  3(7P11.2) WILD-TYPE" 
                   TCGA-IK-8125 
"AMP PEAK  3(7P11.2) WILD-TYPE" 
                   TCGA-CS-4938                    TCGA-CS-4941 
"AMP PEAK  3(7P11.2) WILD-TYPE"   "AMP PEAK  3(7P11.2) MUTATED" 
                   TCGA-CS-4942                    TCGA-CS-4943 
  "AMP PEAK  3(7P11.2) MUTATED" "AMP PEAK  3(7P11.2) WILD-TYPE" 
                   TCGA-CS-4944                    TCGA-CS-5390 
"AMP PEAK  3(7P11.2) WILD-TYPE" "AMP PEAK  3(7P11.2) WILD-TYPE" 
                   TCGA-CS-5393                    TCGA-CS-5394 
  "AMP PEAK  3(7P11.2) MUTATED" "AMP PEAK  3(7P11.2) WILD-TYPE" 
                   TCGA-CS-5395                    TCGA-CS-5396 
  "AMP PEAK  3(7P11.2) MUTATED"   "AMP PEAK  3(7P11.2) MUTATED" 
                   TCGA-CS-5397                    TCGA-CS-6186 
  "AMP PEAK  3(7P11.2) MUTATED"   "AMP PEAK  3(7P11.2) MUTATED" 
                   TCGA-CS-6188                    TCGA-CS-6290 
  "AMP PEAK  3(7P11.2) MUTATED" "AMP PEAK  3(7P11.2) WILD-TYPE" 
                   TCGA-CS-6665                    TCGA-CS-6666 
  "AMP PEAK  3(7P11.2) MUTATED" "AMP PEAK  3(7P11.2) WILD-TYPE" 
                   TCGA-CS-6667                    TCGA-CS-6668 
"AMP PEAK  3(7P11.2) WILD-TYPE" "AMP PEAK  3(7P11.2) WILD-TYPE" 
                   TCGA-CS-6669                    TCGA-CS-6670 
"AMP PEAK  3(7P11.2) WILD-TYPE"   "AMP PEAK  3(7P11.2) MUTATED" 
                   TCGA-DB-5270                    TCGA-DB-5273 
  "AMP PEAK  3(7P11.2) MUTATED" "AMP PEAK  3(7P11.2) WILD-TYPE" 
                   TCGA-DB-5274                    TCGA-DB-5275 
"AMP PEAK  3(7P11.2) WILD-TYPE" "AMP PEAK  3(7P11.2) WILD-TYPE" 
                   TCGA-DB-5276                    TCGA-DB-5277 
"AMP PEAK  3(7P11.2) WILD-TYPE" "AMP PEAK  3(7P11.2) WILD-TYPE" 
                   TCGA-DB-5278                    TCGA-DB-5279 
"AMP PEAK  3(7P11.2) WILD-TYPE" "AMP PEAK  3(7P11.2) WILD-TYPE" 
                   TCGA-DB-5280                    TCGA-DB-5281 
"AMP PEAK  3(7P11.2) WILD-TYPE" "AMP PEAK  3(7P11.2) WILD-TYPE" 
                   TCGA-DH-5140                    TCGA-DH-5141 
"AMP PEAK  3(7P11.2) WILD-TYPE" "AMP PEAK  3(7P11.2) WILD-TYPE" 
                   TCGA-DH-5142                    TCGA-DH-5143 
  "AMP PEAK  3(7P11.2) MUTATED" "AMP PEAK  3(7P11.2) WILD-TYPE" 
                   TCGA-DH-5144                    TCGA-DU-5847 
"AMP PEAK  3(7P11.2) WILD-TYPE" "AMP PEAK  3(7P11.2) WILD-TYPE" 
                   TCGA-DU-5849                    TCGA-DU-5851 
"AMP PEAK  3(7P11.2) WILD-TYPE" "AMP PEAK  3(7P11.2) WILD-TYPE" 
                   TCGA-DU-5852                    TCGA-DU-5853 
  "AMP PEAK  3(7P11.2) MUTATED" "AMP PEAK  3(7P11.2) WILD-TYPE" 
                   TCGA-DU-5854                    TCGA-DU-5855 
  "AMP PEAK  3(7P11.2) MUTATED" "AMP PEAK  3(7P11.2) WILD-TYPE" 
                   TCGA-DU-5870                    TCGA-DU-5871 
"AMP PEAK  3(7P11.2) WILD-TYPE" "AMP PEAK  3(7P11.2) WILD-TYPE" 
                   TCGA-DU-5872                    TCGA-DU-5874 
"AMP PEAK  3(7P11.2) WILD-TYPE" "AMP PEAK  3(7P11.2) WILD-TYPE" 
                   TCGA-DU-6392                    TCGA-DU-6393 
  "AMP PEAK  3(7P11.2) MUTATED" "AMP PEAK  3(7P11.2) WILD-TYPE" 
                   TCGA-DU-6394                    TCGA-DU-6395 
"AMP PEAK  3(7P11.2) WILD-TYPE"   "AMP PEAK  3(7P11.2) MUTATED" 
                   TCGA-DU-6396                    TCGA-DU-6397 
"AMP PEAK  3(7P11.2) WILD-TYPE" "AMP PEAK  3(7P11.2) WILD-TYPE" 
                   TCGA-DU-6399                    TCGA-DU-6400 
"AMP PEAK  3(7P11.2) WILD-TYPE"   "AMP PEAK  3(7P11.2) MUTATED" 
                   TCGA-DU-6401                    TCGA-DU-6402 
"AMP PEAK  3(7P11.2) WILD-TYPE"   "AMP PEAK  3(7P11.2) MUTATED" 
                   TCGA-DU-6403                    TCGA-DU-6404 
  "AMP PEAK  3(7P11.2) MUTATED"   "AMP PEAK  3(7P11.2) MUTATED" 
                   TCGA-DU-6405                    TCGA-DU-6406 
  "AMP PEAK  3(7P11.2) MUTATED"   "AMP PEAK  3(7P11.2) MUTATED" 
                   TCGA-DU-6407                    TCGA-DU-6408 
  "AMP PEAK  3(7P11.2) MUTATED" "AMP PEAK  3(7P11.2) WILD-TYPE" 
                   TCGA-DU-6410                    TCGA-DU-6542 
  "AMP PEAK  3(7P11.2) MUTATED" "AMP PEAK  3(7P11.2) WILD-TYPE" 
                   TCGA-DU-7006                    TCGA-DU-7007 
  "AMP PEAK  3(7P11.2) MUTATED" "AMP PEAK  3(7P11.2) WILD-TYPE" 
                   TCGA-DU-7008                    TCGA-DU-7009 
"AMP PEAK  3(7P11.2) WILD-TYPE" "AMP PEAK  3(7P11.2) WILD-TYPE" 
                   TCGA-DU-7010                    TCGA-DU-7011 
"AMP PEAK  3(7P11.2) WILD-TYPE"   "AMP PEAK  3(7P11.2) MUTATED" 
                   TCGA-DU-7012                    TCGA-DU-7013 
  "AMP PEAK  3(7P11.2) MUTATED"   "AMP PEAK  3(7P11.2) MUTATED" 
                   TCGA-DU-7014                    TCGA-DU-7015 
  "AMP PEAK  3(7P11.2) MUTATED"   "AMP PEAK  3(7P11.2) MUTATED" 
                   TCGA-DU-7018                    TCGA-DU-7019 
"AMP PEAK  3(7P11.2) WILD-TYPE" "AMP PEAK  3(7P11.2) WILD-TYPE" 
                   TCGA-DU-7290                    TCGA-DU-7292 
"AMP PEAK  3(7P11.2) WILD-TYPE"   "AMP PEAK  3(7P11.2) MUTATED" 
                   TCGA-DU-7294                    TCGA-DU-7298 
"AMP PEAK  3(7P11.2) WILD-TYPE" "AMP PEAK  3(7P11.2) WILD-TYPE" 
                   TCGA-DU-7299                    TCGA-DU-7300 
"AMP PEAK  3(7P11.2) WILD-TYPE" "AMP PEAK  3(7P11.2) WILD-TYPE" 
                   TCGA-DU-7301                    TCGA-DU-7302 
"AMP PEAK  3(7P11.2) WILD-TYPE" "AMP PEAK  3(7P11.2) WILD-TYPE" 
                   TCGA-DU-7304                    TCGA-DU-7306 
"AMP PEAK  3(7P11.2) WILD-TYPE" "AMP PEAK  3(7P11.2) WILD-TYPE" 
                   TCGA-DU-7309                    TCGA-E1-5302 
"AMP PEAK  3(7P11.2) WILD-TYPE" "AMP PEAK  3(7P11.2) WILD-TYPE" 
                   TCGA-E1-5303                    TCGA-E1-5304 
"AMP PEAK  3(7P11.2) WILD-TYPE"   "AMP PEAK  3(7P11.2) MUTATED" 
                   TCGA-E1-5305                    TCGA-E1-5307 
"AMP PEAK  3(7P11.2) WILD-TYPE" "AMP PEAK  3(7P11.2) WILD-TYPE" 
                   TCGA-E1-5311                    TCGA-E1-5318 
"AMP PEAK  3(7P11.2) WILD-TYPE" "AMP PEAK  3(7P11.2) WILD-TYPE" 
                   TCGA-E1-5319                    TCGA-E1-5322 
"AMP PEAK  3(7P11.2) WILD-TYPE"   "AMP PEAK  3(7P11.2) MUTATED" 
                   TCGA-EZ-7264                    TCGA-FG-5962 
"AMP PEAK  3(7P11.2) WILD-TYPE"   "AMP PEAK  3(7P11.2) MUTATED" 
                   TCGA-FG-5963                    TCGA-FG-5964 
"AMP PEAK  3(7P11.2) WILD-TYPE" "AMP PEAK  3(7P11.2) WILD-TYPE" 
                   TCGA-FG-5965                    TCGA-FG-6688 
"AMP PEAK  3(7P11.2) WILD-TYPE"   "AMP PEAK  3(7P11.2) MUTATED" 
                   TCGA-FG-6689                    TCGA-FG-6690 
"AMP PEAK  3(7P11.2) WILD-TYPE" "AMP PEAK  3(7P11.2) WILD-TYPE" 
                   TCGA-FG-6691                    TCGA-FG-6692 
  "AMP PEAK  3(7P11.2) MUTATED"   "AMP PEAK  3(7P11.2) MUTATED" 
                   TCGA-FG-7634                    TCGA-FG-7636 
  "AMP PEAK  3(7P11.2) MUTATED" "AMP PEAK  3(7P11.2) WILD-TYPE" 
                   TCGA-FG-7638                    TCGA-FG-7643 
"AMP PEAK  3(7P11.2) WILD-TYPE"   "AMP PEAK  3(7P11.2) MUTATED" 
                   TCGA-FN-7833                    TCGA-HT-7467 
"AMP PEAK  3(7P11.2) WILD-TYPE" "AMP PEAK  3(7P11.2) WILD-TYPE" 
                   TCGA-HT-7468                    TCGA-HT-7470 
"AMP PEAK  3(7P11.2) WILD-TYPE" "AMP PEAK  3(7P11.2) WILD-TYPE" 
                   TCGA-HT-7472                    TCGA-HT-7473 
"AMP PEAK  3(7P11.2) WILD-TYPE"   "AMP PEAK  3(7P11.2) MUTATED" 
                   TCGA-HT-7474                    TCGA-HT-7475 
"AMP PEAK  3(7P11.2) WILD-TYPE" "AMP PEAK  3(7P11.2) WILD-TYPE" 
                   TCGA-HT-7476                    TCGA-HT-7478 
"AMP PEAK  3(7P11.2) WILD-TYPE" "AMP PEAK  3(7P11.2) WILD-TYPE" 
                   TCGA-HT-7479                    TCGA-HT-7480 
"AMP PEAK  3(7P11.2) WILD-TYPE" "AMP PEAK  3(7P11.2) WILD-TYPE" 
                   TCGA-HT-7481                    TCGA-HT-7482 
"AMP PEAK  3(7P11.2) WILD-TYPE" "AMP PEAK  3(7P11.2) WILD-TYPE" 
                   TCGA-HT-7483                    TCGA-HT-7485 
"AMP PEAK  3(7P11.2) WILD-TYPE" "AMP PEAK  3(7P11.2) WILD-TYPE" 
                   TCGA-HT-7601                    TCGA-HT-7602 
"AMP PEAK  3(7P11.2) WILD-TYPE" "AMP PEAK  3(7P11.2) WILD-TYPE" 
                   TCGA-HT-7603                    TCGA-HT-7604 
"AMP PEAK  3(7P11.2) WILD-TYPE" "AMP PEAK  3(7P11.2) WILD-TYPE" 
                   TCGA-HT-7605                    TCGA-HT-7606 
"AMP PEAK  3(7P11.2) WILD-TYPE" "AMP PEAK  3(7P11.2) WILD-TYPE" 
                   TCGA-HT-7607                    TCGA-HT-7608 
"AMP PEAK  3(7P11.2) WILD-TYPE" "AMP PEAK  3(7P11.2) WILD-TYPE" 
                   TCGA-HT-7609                    TCGA-HT-7610 
"AMP PEAK  3(7P11.2) WILD-TYPE" "AMP PEAK  3(7P11.2) WILD-TYPE" 
                   TCGA-HW-7486                    TCGA-HW-7487 
"AMP PEAK  3(7P11.2) WILD-TYPE" "AMP PEAK  3(7P11.2) WILD-TYPE" 
                   TCGA-HW-7489                    TCGA-HW-7490 
"AMP PEAK  3(7P11.2) WILD-TYPE" "AMP PEAK  3(7P11.2) WILD-TYPE" 
                   TCGA-HW-7491                    TCGA-HW-7493 
"AMP PEAK  3(7P11.2) WILD-TYPE" "AMP PEAK  3(7P11.2) WILD-TYPE" 
                   TCGA-HW-7495                    TCGA-IK-7675 
"AMP PEAK  3(7P11.2) WILD-TYPE" "AMP PEAK  3(7P11.2) WILD-TYPE" 
                   TCGA-IK-8125 
"AMP PEAK  3(7P11.2) WILD-TYPE" 
                   TCGA-CS-4938                    TCGA-CS-4941 
"AMP PEAK  3(7P11.2) WILD-TYPE"   "AMP PEAK  3(7P11.2) MUTATED" 
                   TCGA-CS-4942                    TCGA-CS-4943 
  "AMP PEAK  3(7P11.2) MUTATED" "AMP PEAK  3(7P11.2) WILD-TYPE" 
                   TCGA-CS-4944                    TCGA-CS-5390 
"AMP PEAK  3(7P11.2) WILD-TYPE" "AMP PEAK  3(7P11.2) WILD-TYPE" 
                   TCGA-CS-5393                    TCGA-CS-5394 
  "AMP PEAK  3(7P11.2) MUTATED" "AMP PEAK  3(7P11.2) WILD-TYPE" 
                   TCGA-CS-5395                    TCGA-CS-5396 
  "AMP PEAK  3(7P11.2) MUTATED"   "AMP PEAK  3(7P11.2) MUTATED" 
                   TCGA-CS-5397                    TCGA-CS-6186 
  "AMP PEAK  3(7P11.2) MUTATED"   "AMP PEAK  3(7P11.2) MUTATED" 
                   TCGA-CS-6188                    TCGA-CS-6290 
  "AMP PEAK  3(7P11.2) MUTATED" "AMP PEAK  3(7P11.2) WILD-TYPE" 
                   TCGA-CS-6665                    TCGA-CS-6666 
  "AMP PEAK  3(7P11.2) MUTATED" "AMP PEAK  3(7P11.2) WILD-TYPE" 
                   TCGA-CS-6667                    TCGA-CS-6668 
"AMP PEAK  3(7P11.2) WILD-TYPE" "AMP PEAK  3(7P11.2) WILD-TYPE" 
                   TCGA-CS-6669                    TCGA-CS-6670 
"AMP PEAK  3(7P11.2) WILD-TYPE"   "AMP PEAK  3(7P11.2) MUTATED" 
                   TCGA-DB-5270                    TCGA-DB-5273 
  "AMP PEAK  3(7P11.2) MUTATED" "AMP PEAK  3(7P11.2) WILD-TYPE" 
                   TCGA-DB-5274                    TCGA-DB-5275 
"AMP PEAK  3(7P11.2) WILD-TYPE" "AMP PEAK  3(7P11.2) WILD-TYPE" 
                   TCGA-DB-5276                    TCGA-DB-5277 
"AMP PEAK  3(7P11.2) WILD-TYPE" "AMP PEAK  3(7P11.2) WILD-TYPE" 
                   TCGA-DB-5278                    TCGA-DB-5279 
"AMP PEAK  3(7P11.2) WILD-TYPE" "AMP PEAK  3(7P11.2) WILD-TYPE" 
                   TCGA-DB-5280                    TCGA-DB-5281 
"AMP PEAK  3(7P11.2) WILD-TYPE" "AMP PEAK  3(7P11.2) WILD-TYPE" 
                   TCGA-DH-5140                    TCGA-DH-5141 
"AMP PEAK  3(7P11.2) WILD-TYPE" "AMP PEAK  3(7P11.2) WILD-TYPE" 
                   TCGA-DH-5142                    TCGA-DH-5143 
  "AMP PEAK  3(7P11.2) MUTATED" "AMP PEAK  3(7P11.2) WILD-TYPE" 
                   TCGA-DH-5144                    TCGA-DU-5847 
"AMP PEAK  3(7P11.2) WILD-TYPE" "AMP PEAK  3(7P11.2) WILD-TYPE" 
                   TCGA-DU-5849                    TCGA-DU-5851 
"AMP PEAK  3(7P11.2) WILD-TYPE" "AMP PEAK  3(7P11.2) WILD-TYPE" 
                   TCGA-DU-5852                    TCGA-DU-5853 
  "AMP PEAK  3(7P11.2) MUTATED" "AMP PEAK  3(7P11.2) WILD-TYPE" 
                   TCGA-DU-5854                    TCGA-DU-5855 
  "AMP PEAK  3(7P11.2) MUTATED" "AMP PEAK  3(7P11.2) WILD-TYPE" 
                   TCGA-DU-5870                    TCGA-DU-5871 
"AMP PEAK  3(7P11.2) WILD-TYPE" "AMP PEAK  3(7P11.2) WILD-TYPE" 
                   TCGA-DU-5872                    TCGA-DU-5874 
"AMP PEAK  3(7P11.2) WILD-TYPE" "AMP PEAK  3(7P11.2) WILD-TYPE" 
                   TCGA-DU-6392                    TCGA-DU-6393 
  "AMP PEAK  3(7P11.2) MUTATED" "AMP PEAK  3(7P11.2) WILD-TYPE" 
                   TCGA-DU-6394                    TCGA-DU-6395 
"AMP PEAK  3(7P11.2) WILD-TYPE"   "AMP PEAK  3(7P11.2) MUTATED" 
                   TCGA-DU-6396                    TCGA-DU-6397 
"AMP PEAK  3(7P11.2) WILD-TYPE" "AMP PEAK  3(7P11.2) WILD-TYPE" 
                   TCGA-DU-6399                    TCGA-DU-6400 
"AMP PEAK  3(7P11.2) WILD-TYPE"   "AMP PEAK  3(7P11.2) MUTATED" 
                   TCGA-DU-6401                    TCGA-DU-6402 
"AMP PEAK  3(7P11.2) WILD-TYPE"   "AMP PEAK  3(7P11.2) MUTATED" 
                   TCGA-DU-6403                    TCGA-DU-6404 
  "AMP PEAK  3(7P11.2) MUTATED"   "AMP PEAK  3(7P11.2) MUTATED" 
                   TCGA-DU-6405                    TCGA-DU-6406 
  "AMP PEAK  3(7P11.2) MUTATED"   "AMP PEAK  3(7P11.2) MUTATED" 
                   TCGA-DU-6407                    TCGA-DU-6408 
  "AMP PEAK  3(7P11.2) MUTATED" "AMP PEAK  3(7P11.2) WILD-TYPE" 
                   TCGA-DU-6410                    TCGA-DU-6542 
  "AMP PEAK  3(7P11.2) MUTATED" "AMP PEAK  3(7P11.2) WILD-TYPE" 
                   TCGA-DU-7006                    TCGA-DU-7007 
  "AMP PEAK  3(7P11.2) MUTATED" "AMP PEAK  3(7P11.2) WILD-TYPE" 
                   TCGA-DU-7008                    TCGA-DU-7009 
"AMP PEAK  3(7P11.2) WILD-TYPE" "AMP PEAK  3(7P11.2) WILD-TYPE" 
                   TCGA-DU-7010                    TCGA-DU-7011 
"AMP PEAK  3(7P11.2) WILD-TYPE"   "AMP PEAK  3(7P11.2) MUTATED" 
                   TCGA-DU-7012                    TCGA-DU-7013 
  "AMP PEAK  3(7P11.2) MUTATED"   "AMP PEAK  3(7P11.2) MUTATED" 
                   TCGA-DU-7014                    TCGA-DU-7015 
  "AMP PEAK  3(7P11.2) MUTATED"   "AMP PEAK  3(7P11.2) MUTATED" 
                   TCGA-DU-7018                    TCGA-DU-7019 
"AMP PEAK  3(7P11.2) WILD-TYPE" "AMP PEAK  3(7P11.2) WILD-TYPE" 
                   TCGA-DU-7290                    TCGA-DU-7292 
"AMP PEAK  3(7P11.2) WILD-TYPE"   "AMP PEAK  3(7P11.2) MUTATED" 
                   TCGA-DU-7294                    TCGA-DU-7298 
"AMP PEAK  3(7P11.2) WILD-TYPE" "AMP PEAK  3(7P11.2) WILD-TYPE" 
                   TCGA-DU-7299                    TCGA-DU-7300 
"AMP PEAK  3(7P11.2) WILD-TYPE" "AMP PEAK  3(7P11.2) WILD-TYPE" 
                   TCGA-DU-7301                    TCGA-DU-7302 
"AMP PEAK  3(7P11.2) WILD-TYPE" "AMP PEAK  3(7P11.2) WILD-TYPE" 
                   TCGA-DU-7304                    TCGA-DU-7306 
"AMP PEAK  3(7P11.2) WILD-TYPE" "AMP PEAK  3(7P11.2) WILD-TYPE" 
                   TCGA-DU-7309                    TCGA-E1-5302 
"AMP PEAK  3(7P11.2) WILD-TYPE" "AMP PEAK  3(7P11.2) WILD-TYPE" 
                   TCGA-E1-5303                    TCGA-E1-5304 
"AMP PEAK  3(7P11.2) WILD-TYPE"   "AMP PEAK  3(7P11.2) MUTATED" 
                   TCGA-E1-5305                    TCGA-E1-5307 
"AMP PEAK  3(7P11.2) WILD-TYPE" "AMP PEAK  3(7P11.2) WILD-TYPE" 
                   TCGA-E1-5311                    TCGA-E1-5318 
"AMP PEAK  3(7P11.2) WILD-TYPE" "AMP PEAK  3(7P11.2) WILD-TYPE" 
                   TCGA-E1-5319                    TCGA-E1-5322 
"AMP PEAK  3(7P11.2) WILD-TYPE"   "AMP PEAK  3(7P11.2) MUTATED" 
                   TCGA-EZ-7264                    TCGA-FG-5962 
"AMP PEAK  3(7P11.2) WILD-TYPE"   "AMP PEAK  3(7P11.2) MUTATED" 
                   TCGA-FG-5963                    TCGA-FG-5964 
"AMP PEAK  3(7P11.2) WILD-TYPE" "AMP PEAK  3(7P11.2) WILD-TYPE" 
                   TCGA-FG-5965                    TCGA-FG-6688 
"AMP PEAK  3(7P11.2) WILD-TYPE"   "AMP PEAK  3(7P11.2) MUTATED" 
                   TCGA-FG-6689                    TCGA-FG-6690 
"AMP PEAK  3(7P11.2) WILD-TYPE" "AMP PEAK  3(7P11.2) WILD-TYPE" 
                   TCGA-FG-6691                    TCGA-FG-6692 
  "AMP PEAK  3(7P11.2) MUTATED"   "AMP PEAK  3(7P11.2) MUTATED" 
                   TCGA-FG-7634                    TCGA-FG-7636 
  "AMP PEAK  3(7P11.2) MUTATED" "AMP PEAK  3(7P11.2) WILD-TYPE" 
                   TCGA-FG-7638                    TCGA-FG-7643 
"AMP PEAK  3(7P11.2) WILD-TYPE"   "AMP PEAK  3(7P11.2) MUTATED" 
                   TCGA-FN-7833                    TCGA-HT-7467 
"AMP PEAK  3(7P11.2) WILD-TYPE" "AMP PEAK  3(7P11.2) WILD-TYPE" 
                   TCGA-HT-7468                    TCGA-HT-7470 
"AMP PEAK  3(7P11.2) WILD-TYPE" "AMP PEAK  3(7P11.2) WILD-TYPE" 
                   TCGA-HT-7472                    TCGA-HT-7473 
"AMP PEAK  3(7P11.2) WILD-TYPE"   "AMP PEAK  3(7P11.2) MUTATED" 
                   TCGA-HT-7474                    TCGA-HT-7475 
"AMP PEAK  3(7P11.2) WILD-TYPE" "AMP PEAK  3(7P11.2) WILD-TYPE" 
                   TCGA-HT-7476                    TCGA-HT-7478 
"AMP PEAK  3(7P11.2) WILD-TYPE" "AMP PEAK  3(7P11.2) WILD-TYPE" 
                   TCGA-HT-7479                    TCGA-HT-7480 
"AMP PEAK  3(7P11.2) WILD-TYPE" "AMP PEAK  3(7P11.2) WILD-TYPE" 
                   TCGA-HT-7481                    TCGA-HT-7482 
"AMP PEAK  3(7P11.2) WILD-TYPE" "AMP PEAK  3(7P11.2) WILD-TYPE" 
                   TCGA-HT-7483                    TCGA-HT-7485 
"AMP PEAK  3(7P11.2) WILD-TYPE" "AMP PEAK  3(7P11.2) WILD-TYPE" 
                   TCGA-HT-7601                    TCGA-HT-7602 
"AMP PEAK  3(7P11.2) WILD-TYPE" "AMP PEAK  3(7P11.2) WILD-TYPE" 
                   TCGA-HT-7603                    TCGA-HT-7604 
"AMP PEAK  3(7P11.2) WILD-TYPE" "AMP PEAK  3(7P11.2) WILD-TYPE" 
                   TCGA-HT-7605                    TCGA-HT-7606 
"AMP PEAK  3(7P11.2) WILD-TYPE" "AMP PEAK  3(7P11.2) WILD-TYPE" 
                   TCGA-HT-7607                    TCGA-HT-7608 
"AMP PEAK  3(7P11.2) WILD-TYPE" "AMP PEAK  3(7P11.2) WILD-TYPE" 
                   TCGA-HT-7609                    TCGA-HT-7610 
"AMP PEAK  3(7P11.2) WILD-TYPE" "AMP PEAK  3(7P11.2) WILD-TYPE" 
                   TCGA-HW-7486                    TCGA-HW-7487 
"AMP PEAK  3(7P11.2) WILD-TYPE" "AMP PEAK  3(7P11.2) WILD-TYPE" 
                   TCGA-HW-7489                    TCGA-HW-7490 
"AMP PEAK  3(7P11.2) WILD-TYPE" "AMP PEAK  3(7P11.2) WILD-TYPE" 
                   TCGA-HW-7491                    TCGA-HW-7493 
"AMP PEAK  3(7P11.2) WILD-TYPE" "AMP PEAK  3(7P11.2) WILD-TYPE" 
                   TCGA-HW-7495                    TCGA-IK-7675 
"AMP PEAK  3(7P11.2) WILD-TYPE" "AMP PEAK  3(7P11.2) WILD-TYPE" 
                   TCGA-IK-8125 
"AMP PEAK  3(7P11.2) WILD-TYPE" 
[1] "hr=" "2.1"
D3V2, continuous
D3V3, binary
[1] "tbl2"
                               cls
clus                            [,1] [,2]
  AMP PEAK  3(7P11.2) MUTATED     21   19
  AMP PEAK  3(7P11.2) WILD-TYPE   41   64
        clus
vv       AMP PEAK  3(7P11.2) MUTATED AMP PEAK  3(7P11.2) WILD-TYPE
  FEMALE                          21                            41
  MALE                            19                            64
D3V4, continuous
D3V5, multiclass
                   clus
vv                  AMP PEAK  3(7P11.2) MUTATED AMP PEAK  3(7P11.2) WILD-TYPE
  ASTROCYTOMA                                18                            32
  OLIGOASTROCYTOMA                            9                            27
  OLIGODENDROGLIOMA                          13                            45
D3V6, binary
[1] "tbl2"
                               cls
clus                            [,1] [,2]
  AMP PEAK  3(7P11.2) MUTATED     11   29
  AMP PEAK  3(7P11.2) WILD-TYPE   48   57
     clus
vv    AMP PEAK  3(7P11.2) MUTATED AMP PEAK  3(7P11.2) WILD-TYPE
  NO                           29                            57
  YES                          11                            48
D3V7, binary
[1] "tbl2"
                               cls
clus                            [,1] [,2]
  AMP PEAK  3(7P11.2) MUTATED     22   18
  AMP PEAK  3(7P11.2) WILD-TYPE   52   53
     clus
vv    AMP PEAK  3(7P11.2) MUTATED AMP PEAK  3(7P11.2) WILD-TYPE
  NO                           18                            53
  YES                          22                            52

Clustering(4) Variable = Amp Peak  4(7q32.3) mutation analysis
D4V1, survival
                   TCGA-CS-4938                    TCGA-CS-4941 
  "AMP PEAK  4(7Q32.3) MUTATED"   "AMP PEAK  4(7Q32.3) MUTATED" 
                   TCGA-CS-4942                    TCGA-CS-4943 
  "AMP PEAK  4(7Q32.3) MUTATED" "AMP PEAK  4(7Q32.3) WILD-TYPE" 
                   TCGA-CS-4944                    TCGA-CS-5390 
"AMP PEAK  4(7Q32.3) WILD-TYPE" "AMP PEAK  4(7Q32.3) WILD-TYPE" 
                   TCGA-CS-5393                    TCGA-CS-5394 
"AMP PEAK  4(7Q32.3) WILD-TYPE" "AMP PEAK  4(7Q32.3) WILD-TYPE" 
                   TCGA-CS-5395                    TCGA-CS-5396 
  "AMP PEAK  4(7Q32.3) MUTATED"   "AMP PEAK  4(7Q32.3) MUTATED" 
                   TCGA-CS-5397                    TCGA-CS-6186 
  "AMP PEAK  4(7Q32.3) MUTATED"   "AMP PEAK  4(7Q32.3) MUTATED" 
                   TCGA-CS-6188                    TCGA-CS-6290 
  "AMP PEAK  4(7Q32.3) MUTATED" "AMP PEAK  4(7Q32.3) WILD-TYPE" 
                   TCGA-CS-6665                    TCGA-CS-6666 
  "AMP PEAK  4(7Q32.3) MUTATED" "AMP PEAK  4(7Q32.3) WILD-TYPE" 
                   TCGA-CS-6667                    TCGA-CS-6668 
"AMP PEAK  4(7Q32.3) WILD-TYPE" "AMP PEAK  4(7Q32.3) WILD-TYPE" 
                   TCGA-CS-6669                    TCGA-CS-6670 
"AMP PEAK  4(7Q32.3) WILD-TYPE"   "AMP PEAK  4(7Q32.3) MUTATED" 
                   TCGA-DB-5270                    TCGA-DB-5273 
  "AMP PEAK  4(7Q32.3) MUTATED" "AMP PEAK  4(7Q32.3) WILD-TYPE" 
                   TCGA-DB-5274                    TCGA-DB-5275 
"AMP PEAK  4(7Q32.3) WILD-TYPE" "AMP PEAK  4(7Q32.3) WILD-TYPE" 
                   TCGA-DB-5276                    TCGA-DB-5277 
"AMP PEAK  4(7Q32.3) WILD-TYPE" "AMP PEAK  4(7Q32.3) WILD-TYPE" 
                   TCGA-DB-5278                    TCGA-DB-5279 
"AMP PEAK  4(7Q32.3) WILD-TYPE" "AMP PEAK  4(7Q32.3) WILD-TYPE" 
                   TCGA-DB-5280                    TCGA-DB-5281 
"AMP PEAK  4(7Q32.3) WILD-TYPE"   "AMP PEAK  4(7Q32.3) MUTATED" 
                   TCGA-DH-5140                    TCGA-DH-5141 
"AMP PEAK  4(7Q32.3) WILD-TYPE" "AMP PEAK  4(7Q32.3) WILD-TYPE" 
                   TCGA-DH-5142                    TCGA-DH-5143 
"AMP PEAK  4(7Q32.3) WILD-TYPE" "AMP PEAK  4(7Q32.3) WILD-TYPE" 
                   TCGA-DH-5144                    TCGA-DU-5847 
"AMP PEAK  4(7Q32.3) WILD-TYPE" "AMP PEAK  4(7Q32.3) WILD-TYPE" 
                   TCGA-DU-5849                    TCGA-DU-5851 
  "AMP PEAK  4(7Q32.3) MUTATED" "AMP PEAK  4(7Q32.3) WILD-TYPE" 
                   TCGA-DU-5852                    TCGA-DU-5853 
"AMP PEAK  4(7Q32.3) WILD-TYPE" "AMP PEAK  4(7Q32.3) WILD-TYPE" 
                   TCGA-DU-5854                    TCGA-DU-5855 
  "AMP PEAK  4(7Q32.3) MUTATED"   "AMP PEAK  4(7Q32.3) MUTATED" 
                   TCGA-DU-5870                    TCGA-DU-5871 
"AMP PEAK  4(7Q32.3) WILD-TYPE" "AMP PEAK  4(7Q32.3) WILD-TYPE" 
                   TCGA-DU-5872                    TCGA-DU-5874 
  "AMP PEAK  4(7Q32.3) MUTATED" "AMP PEAK  4(7Q32.3) WILD-TYPE" 
                   TCGA-DU-6392                    TCGA-DU-6393 
  "AMP PEAK  4(7Q32.3) MUTATED" "AMP PEAK  4(7Q32.3) WILD-TYPE" 
                   TCGA-DU-6394                    TCGA-DU-6395 
"AMP PEAK  4(7Q32.3) WILD-TYPE"   "AMP PEAK  4(7Q32.3) MUTATED" 
                   TCGA-DU-6396                    TCGA-DU-6397 
"AMP PEAK  4(7Q32.3) WILD-TYPE" "AMP PEAK  4(7Q32.3) WILD-TYPE" 
                   TCGA-DU-6399                    TCGA-DU-6400 
  "AMP PEAK  4(7Q32.3) MUTATED"   "AMP PEAK  4(7Q32.3) MUTATED" 
                   TCGA-DU-6401                    TCGA-DU-6402 
"AMP PEAK  4(7Q32.3) WILD-TYPE"   "AMP PEAK  4(7Q32.3) MUTATED" 
                   TCGA-DU-6403                    TCGA-DU-6404 
  "AMP PEAK  4(7Q32.3) MUTATED"   "AMP PEAK  4(7Q32.3) MUTATED" 
                   TCGA-DU-6405                    TCGA-DU-6406 
  "AMP PEAK  4(7Q32.3) MUTATED"   "AMP PEAK  4(7Q32.3) MUTATED" 
                   TCGA-DU-6407                    TCGA-DU-6408 
  "AMP PEAK  4(7Q32.3) MUTATED" "AMP PEAK  4(7Q32.3) WILD-TYPE" 
                   TCGA-DU-6410                    TCGA-DU-6542 
  "AMP PEAK  4(7Q32.3) MUTATED" "AMP PEAK  4(7Q32.3) WILD-TYPE" 
                   TCGA-DU-7006                    TCGA-DU-7007 
  "AMP PEAK  4(7Q32.3) MUTATED" "AMP PEAK  4(7Q32.3) WILD-TYPE" 
                   TCGA-DU-7008                    TCGA-DU-7009 
  "AMP PEAK  4(7Q32.3) MUTATED"   "AMP PEAK  4(7Q32.3) MUTATED" 
                   TCGA-DU-7010                    TCGA-DU-7011 
  "AMP PEAK  4(7Q32.3) MUTATED"   "AMP PEAK  4(7Q32.3) MUTATED" 
                   TCGA-DU-7012                    TCGA-DU-7013 
  "AMP PEAK  4(7Q32.3) MUTATED"   "AMP PEAK  4(7Q32.3) MUTATED" 
                   TCGA-DU-7014                    TCGA-DU-7015 
  "AMP PEAK  4(7Q32.3) MUTATED"   "AMP PEAK  4(7Q32.3) MUTATED" 
                   TCGA-DU-7018                    TCGA-DU-7019 
"AMP PEAK  4(7Q32.3) WILD-TYPE" "AMP PEAK  4(7Q32.3) WILD-TYPE" 
                   TCGA-DU-7290                    TCGA-DU-7292 
"AMP PEAK  4(7Q32.3) WILD-TYPE"   "AMP PEAK  4(7Q32.3) MUTATED" 
                   TCGA-DU-7294                    TCGA-DU-7298 
"AMP PEAK  4(7Q32.3) WILD-TYPE" "AMP PEAK  4(7Q32.3) WILD-TYPE" 
                   TCGA-DU-7299                    TCGA-DU-7300 
"AMP PEAK  4(7Q32.3) WILD-TYPE" "AMP PEAK  4(7Q32.3) WILD-TYPE" 
                   TCGA-DU-7301                    TCGA-DU-7302 
  "AMP PEAK  4(7Q32.3) MUTATED" "AMP PEAK  4(7Q32.3) WILD-TYPE" 
                   TCGA-DU-7304                    TCGA-DU-7306 
"AMP PEAK  4(7Q32.3) WILD-TYPE"   "AMP PEAK  4(7Q32.3) MUTATED" 
                   TCGA-DU-7309                    TCGA-E1-5302 
  "AMP PEAK  4(7Q32.3) MUTATED"   "AMP PEAK  4(7Q32.3) MUTATED" 
                   TCGA-E1-5303                    TCGA-E1-5304 
"AMP PEAK  4(7Q32.3) WILD-TYPE"   "AMP PEAK  4(7Q32.3) MUTATED" 
                   TCGA-E1-5305                    TCGA-E1-5307 
"AMP PEAK  4(7Q32.3) WILD-TYPE" "AMP PEAK  4(7Q32.3) WILD-TYPE" 
                   TCGA-E1-5311                    TCGA-E1-5318 
"AMP PEAK  4(7Q32.3) WILD-TYPE" "AMP PEAK  4(7Q32.3) WILD-TYPE" 
                   TCGA-E1-5319                    TCGA-E1-5322 
"AMP PEAK  4(7Q32.3) WILD-TYPE"   "AMP PEAK  4(7Q32.3) MUTATED" 
                   TCGA-EZ-7264                    TCGA-FG-5962 
"AMP PEAK  4(7Q32.3) WILD-TYPE"   "AMP PEAK  4(7Q32.3) MUTATED" 
                   TCGA-FG-5963                    TCGA-FG-5964 
"AMP PEAK  4(7Q32.3) WILD-TYPE" "AMP PEAK  4(7Q32.3) WILD-TYPE" 
                   TCGA-FG-5965                    TCGA-FG-6688 
  "AMP PEAK  4(7Q32.3) MUTATED"   "AMP PEAK  4(7Q32.3) MUTATED" 
                   TCGA-FG-6689                    TCGA-FG-6690 
"AMP PEAK  4(7Q32.3) WILD-TYPE"   "AMP PEAK  4(7Q32.3) MUTATED" 
                   TCGA-FG-6691                    TCGA-FG-6692 
  "AMP PEAK  4(7Q32.3) MUTATED"   "AMP PEAK  4(7Q32.3) MUTATED" 
                   TCGA-FG-7634                    TCGA-FG-7636 
  "AMP PEAK  4(7Q32.3) MUTATED" "AMP PEAK  4(7Q32.3) WILD-TYPE" 
                   TCGA-FG-7638                    TCGA-FG-7643 
"AMP PEAK  4(7Q32.3) WILD-TYPE"   "AMP PEAK  4(7Q32.3) MUTATED" 
                   TCGA-FN-7833                    TCGA-HT-7467 
"AMP PEAK  4(7Q32.3) WILD-TYPE" "AMP PEAK  4(7Q32.3) WILD-TYPE" 
                   TCGA-HT-7468                    TCGA-HT-7470 
"AMP PEAK  4(7Q32.3) WILD-TYPE" "AMP PEAK  4(7Q32.3) WILD-TYPE" 
                   TCGA-HT-7472                    TCGA-HT-7473 
"AMP PEAK  4(7Q32.3) WILD-TYPE"   "AMP PEAK  4(7Q32.3) MUTATED" 
                   TCGA-HT-7474                    TCGA-HT-7475 
"AMP PEAK  4(7Q32.3) WILD-TYPE"   "AMP PEAK  4(7Q32.3) MUTATED" 
                   TCGA-HT-7476                    TCGA-HT-7478 
"AMP PEAK  4(7Q32.3) WILD-TYPE" "AMP PEAK  4(7Q32.3) WILD-TYPE" 
                   TCGA-HT-7479                    TCGA-HT-7480 
"AMP PEAK  4(7Q32.3) WILD-TYPE" "AMP PEAK  4(7Q32.3) WILD-TYPE" 
                   TCGA-HT-7481                    TCGA-HT-7482 
"AMP PEAK  4(7Q32.3) WILD-TYPE" "AMP PEAK  4(7Q32.3) WILD-TYPE" 
                   TCGA-HT-7483                    TCGA-HT-7485 
"AMP PEAK  4(7Q32.3) WILD-TYPE" "AMP PEAK  4(7Q32.3) WILD-TYPE" 
                   TCGA-HT-7601                    TCGA-HT-7602 
"AMP PEAK  4(7Q32.3) WILD-TYPE" "AMP PEAK  4(7Q32.3) WILD-TYPE" 
                   TCGA-HT-7603                    TCGA-HT-7604 
"AMP PEAK  4(7Q32.3) WILD-TYPE"   "AMP PEAK  4(7Q32.3) MUTATED" 
                   TCGA-HT-7605                    TCGA-HT-7606 
"AMP PEAK  4(7Q32.3) WILD-TYPE" "AMP PEAK  4(7Q32.3) WILD-TYPE" 
                   TCGA-HT-7607                    TCGA-HT-7608 
"AMP PEAK  4(7Q32.3) WILD-TYPE" "AMP PEAK  4(7Q32.3) WILD-TYPE" 
                   TCGA-HT-7609                    TCGA-HT-7610 
"AMP PEAK  4(7Q32.3) WILD-TYPE"   "AMP PEAK  4(7Q32.3) MUTATED" 
                   TCGA-HW-7486                    TCGA-HW-7487 
"AMP PEAK  4(7Q32.3) WILD-TYPE" "AMP PEAK  4(7Q32.3) WILD-TYPE" 
                   TCGA-HW-7489                    TCGA-HW-7490 
"AMP PEAK  4(7Q32.3) WILD-TYPE" "AMP PEAK  4(7Q32.3) WILD-TYPE" 
                   TCGA-HW-7491                    TCGA-HW-7493 
"AMP PEAK  4(7Q32.3) WILD-TYPE" "AMP PEAK  4(7Q32.3) WILD-TYPE" 
                   TCGA-HW-7495                    TCGA-IK-7675 
  "AMP PEAK  4(7Q32.3) MUTATED" "AMP PEAK  4(7Q32.3) WILD-TYPE" 
                   TCGA-IK-8125 
"AMP PEAK  4(7Q32.3) WILD-TYPE" 
                   TCGA-CS-4938                    TCGA-CS-4941 
  "AMP PEAK  4(7Q32.3) MUTATED"   "AMP PEAK  4(7Q32.3) MUTATED" 
                   TCGA-CS-4942                    TCGA-CS-4943 
  "AMP PEAK  4(7Q32.3) MUTATED" "AMP PEAK  4(7Q32.3) WILD-TYPE" 
                   TCGA-CS-4944                    TCGA-CS-5390 
"AMP PEAK  4(7Q32.3) WILD-TYPE" "AMP PEAK  4(7Q32.3) WILD-TYPE" 
                   TCGA-CS-5393                    TCGA-CS-5394 
"AMP PEAK  4(7Q32.3) WILD-TYPE" "AMP PEAK  4(7Q32.3) WILD-TYPE" 
                   TCGA-CS-5395                    TCGA-CS-5396 
  "AMP PEAK  4(7Q32.3) MUTATED"   "AMP PEAK  4(7Q32.3) MUTATED" 
                   TCGA-CS-5397                    TCGA-CS-6186 
  "AMP PEAK  4(7Q32.3) MUTATED"   "AMP PEAK  4(7Q32.3) MUTATED" 
                   TCGA-CS-6188                    TCGA-CS-6290 
  "AMP PEAK  4(7Q32.3) MUTATED" "AMP PEAK  4(7Q32.3) WILD-TYPE" 
                   TCGA-CS-6665                    TCGA-CS-6666 
  "AMP PEAK  4(7Q32.3) MUTATED" "AMP PEAK  4(7Q32.3) WILD-TYPE" 
                   TCGA-CS-6667                    TCGA-CS-6668 
"AMP PEAK  4(7Q32.3) WILD-TYPE" "AMP PEAK  4(7Q32.3) WILD-TYPE" 
                   TCGA-CS-6669                    TCGA-CS-6670 
"AMP PEAK  4(7Q32.3) WILD-TYPE"   "AMP PEAK  4(7Q32.3) MUTATED" 
                   TCGA-DB-5270                    TCGA-DB-5273 
  "AMP PEAK  4(7Q32.3) MUTATED" "AMP PEAK  4(7Q32.3) WILD-TYPE" 
                   TCGA-DB-5274                    TCGA-DB-5275 
"AMP PEAK  4(7Q32.3) WILD-TYPE" "AMP PEAK  4(7Q32.3) WILD-TYPE" 
                   TCGA-DB-5276                    TCGA-DB-5277 
"AMP PEAK  4(7Q32.3) WILD-TYPE" "AMP PEAK  4(7Q32.3) WILD-TYPE" 
                   TCGA-DB-5278                    TCGA-DB-5279 
"AMP PEAK  4(7Q32.3) WILD-TYPE" "AMP PEAK  4(7Q32.3) WILD-TYPE" 
                   TCGA-DB-5280                    TCGA-DB-5281 
"AMP PEAK  4(7Q32.3) WILD-TYPE"   "AMP PEAK  4(7Q32.3) MUTATED" 
                   TCGA-DH-5140                    TCGA-DH-5141 
"AMP PEAK  4(7Q32.3) WILD-TYPE" "AMP PEAK  4(7Q32.3) WILD-TYPE" 
                   TCGA-DH-5142                    TCGA-DH-5143 
"AMP PEAK  4(7Q32.3) WILD-TYPE" "AMP PEAK  4(7Q32.3) WILD-TYPE" 
                   TCGA-DH-5144                    TCGA-DU-5847 
"AMP PEAK  4(7Q32.3) WILD-TYPE" "AMP PEAK  4(7Q32.3) WILD-TYPE" 
                   TCGA-DU-5849                    TCGA-DU-5851 
  "AMP PEAK  4(7Q32.3) MUTATED" "AMP PEAK  4(7Q32.3) WILD-TYPE" 
                   TCGA-DU-5852                    TCGA-DU-5853 
"AMP PEAK  4(7Q32.3) WILD-TYPE" "AMP PEAK  4(7Q32.3) WILD-TYPE" 
                   TCGA-DU-5854                    TCGA-DU-5855 
  "AMP PEAK  4(7Q32.3) MUTATED"   "AMP PEAK  4(7Q32.3) MUTATED" 
                   TCGA-DU-5870                    TCGA-DU-5871 
"AMP PEAK  4(7Q32.3) WILD-TYPE" "AMP PEAK  4(7Q32.3) WILD-TYPE" 
                   TCGA-DU-5872                    TCGA-DU-5874 
  "AMP PEAK  4(7Q32.3) MUTATED" "AMP PEAK  4(7Q32.3) WILD-TYPE" 
                   TCGA-DU-6392                    TCGA-DU-6393 
  "AMP PEAK  4(7Q32.3) MUTATED" "AMP PEAK  4(7Q32.3) WILD-TYPE" 
                   TCGA-DU-6394                    TCGA-DU-6395 
"AMP PEAK  4(7Q32.3) WILD-TYPE"   "AMP PEAK  4(7Q32.3) MUTATED" 
                   TCGA-DU-6396                    TCGA-DU-6397 
"AMP PEAK  4(7Q32.3) WILD-TYPE" "AMP PEAK  4(7Q32.3) WILD-TYPE" 
                   TCGA-DU-6399                    TCGA-DU-6400 
  "AMP PEAK  4(7Q32.3) MUTATED"   "AMP PEAK  4(7Q32.3) MUTATED" 
                   TCGA-DU-6401                    TCGA-DU-6402 
"AMP PEAK  4(7Q32.3) WILD-TYPE"   "AMP PEAK  4(7Q32.3) MUTATED" 
                   TCGA-DU-6403                    TCGA-DU-6404 
  "AMP PEAK  4(7Q32.3) MUTATED"   "AMP PEAK  4(7Q32.3) MUTATED" 
                   TCGA-DU-6405                    TCGA-DU-6406 
  "AMP PEAK  4(7Q32.3) MUTATED"   "AMP PEAK  4(7Q32.3) MUTATED" 
                   TCGA-DU-6407                    TCGA-DU-6408 
  "AMP PEAK  4(7Q32.3) MUTATED" "AMP PEAK  4(7Q32.3) WILD-TYPE" 
                   TCGA-DU-6410                    TCGA-DU-6542 
  "AMP PEAK  4(7Q32.3) MUTATED" "AMP PEAK  4(7Q32.3) WILD-TYPE" 
                   TCGA-DU-7006                    TCGA-DU-7007 
  "AMP PEAK  4(7Q32.3) MUTATED" "AMP PEAK  4(7Q32.3) WILD-TYPE" 
                   TCGA-DU-7008                    TCGA-DU-7009 
  "AMP PEAK  4(7Q32.3) MUTATED"   "AMP PEAK  4(7Q32.3) MUTATED" 
                   TCGA-DU-7010                    TCGA-DU-7011 
  "AMP PEAK  4(7Q32.3) MUTATED"   "AMP PEAK  4(7Q32.3) MUTATED" 
                   TCGA-DU-7012                    TCGA-DU-7013 
  "AMP PEAK  4(7Q32.3) MUTATED"   "AMP PEAK  4(7Q32.3) MUTATED" 
                   TCGA-DU-7014                    TCGA-DU-7015 
  "AMP PEAK  4(7Q32.3) MUTATED"   "AMP PEAK  4(7Q32.3) MUTATED" 
                   TCGA-DU-7018                    TCGA-DU-7019 
"AMP PEAK  4(7Q32.3) WILD-TYPE" "AMP PEAK  4(7Q32.3) WILD-TYPE" 
                   TCGA-DU-7290                    TCGA-DU-7292 
"AMP PEAK  4(7Q32.3) WILD-TYPE"   "AMP PEAK  4(7Q32.3) MUTATED" 
                   TCGA-DU-7294                    TCGA-DU-7298 
"AMP PEAK  4(7Q32.3) WILD-TYPE" "AMP PEAK  4(7Q32.3) WILD-TYPE" 
                   TCGA-DU-7299                    TCGA-DU-7300 
"AMP PEAK  4(7Q32.3) WILD-TYPE" "AMP PEAK  4(7Q32.3) WILD-TYPE" 
                   TCGA-DU-7301                    TCGA-DU-7302 
  "AMP PEAK  4(7Q32.3) MUTATED" "AMP PEAK  4(7Q32.3) WILD-TYPE" 
                   TCGA-DU-7304                    TCGA-DU-7306 
"AMP PEAK  4(7Q32.3) WILD-TYPE"   "AMP PEAK  4(7Q32.3) MUTATED" 
                   TCGA-DU-7309                    TCGA-E1-5302 
  "AMP PEAK  4(7Q32.3) MUTATED"   "AMP PEAK  4(7Q32.3) MUTATED" 
                   TCGA-E1-5303                    TCGA-E1-5304 
"AMP PEAK  4(7Q32.3) WILD-TYPE"   "AMP PEAK  4(7Q32.3) MUTATED" 
                   TCGA-E1-5305                    TCGA-E1-5307 
"AMP PEAK  4(7Q32.3) WILD-TYPE" "AMP PEAK  4(7Q32.3) WILD-TYPE" 
                   TCGA-E1-5311                    TCGA-E1-5318 
"AMP PEAK  4(7Q32.3) WILD-TYPE" "AMP PEAK  4(7Q32.3) WILD-TYPE" 
                   TCGA-E1-5319                    TCGA-E1-5322 
"AMP PEAK  4(7Q32.3) WILD-TYPE"   "AMP PEAK  4(7Q32.3) MUTATED" 
                   TCGA-EZ-7264                    TCGA-FG-5962 
"AMP PEAK  4(7Q32.3) WILD-TYPE"   "AMP PEAK  4(7Q32.3) MUTATED" 
                   TCGA-FG-5963                    TCGA-FG-5964 
"AMP PEAK  4(7Q32.3) WILD-TYPE" "AMP PEAK  4(7Q32.3) WILD-TYPE" 
                   TCGA-FG-5965                    TCGA-FG-6688 
  "AMP PEAK  4(7Q32.3) MUTATED"   "AMP PEAK  4(7Q32.3) MUTATED" 
                   TCGA-FG-6689                    TCGA-FG-6690 
"AMP PEAK  4(7Q32.3) WILD-TYPE"   "AMP PEAK  4(7Q32.3) MUTATED" 
                   TCGA-FG-6691                    TCGA-FG-6692 
  "AMP PEAK  4(7Q32.3) MUTATED"   "AMP PEAK  4(7Q32.3) MUTATED" 
                   TCGA-FG-7634                    TCGA-FG-7636 
  "AMP PEAK  4(7Q32.3) MUTATED" "AMP PEAK  4(7Q32.3) WILD-TYPE" 
                   TCGA-FG-7638                    TCGA-FG-7643 
"AMP PEAK  4(7Q32.3) WILD-TYPE"   "AMP PEAK  4(7Q32.3) MUTATED" 
                   TCGA-FN-7833                    TCGA-HT-7467 
"AMP PEAK  4(7Q32.3) WILD-TYPE" "AMP PEAK  4(7Q32.3) WILD-TYPE" 
                   TCGA-HT-7468                    TCGA-HT-7470 
"AMP PEAK  4(7Q32.3) WILD-TYPE" "AMP PEAK  4(7Q32.3) WILD-TYPE" 
                   TCGA-HT-7472                    TCGA-HT-7473 
"AMP PEAK  4(7Q32.3) WILD-TYPE"   "AMP PEAK  4(7Q32.3) MUTATED" 
                   TCGA-HT-7474                    TCGA-HT-7475 
"AMP PEAK  4(7Q32.3) WILD-TYPE"   "AMP PEAK  4(7Q32.3) MUTATED" 
                   TCGA-HT-7476                    TCGA-HT-7478 
"AMP PEAK  4(7Q32.3) WILD-TYPE" "AMP PEAK  4(7Q32.3) WILD-TYPE" 
                   TCGA-HT-7479                    TCGA-HT-7480 
"AMP PEAK  4(7Q32.3) WILD-TYPE" "AMP PEAK  4(7Q32.3) WILD-TYPE" 
                   TCGA-HT-7481                    TCGA-HT-7482 
"AMP PEAK  4(7Q32.3) WILD-TYPE" "AMP PEAK  4(7Q32.3) WILD-TYPE" 
                   TCGA-HT-7483                    TCGA-HT-7485 
"AMP PEAK  4(7Q32.3) WILD-TYPE" "AMP PEAK  4(7Q32.3) WILD-TYPE" 
                   TCGA-HT-7601                    TCGA-HT-7602 
"AMP PEAK  4(7Q32.3) WILD-TYPE" "AMP PEAK  4(7Q32.3) WILD-TYPE" 
                   TCGA-HT-7603                    TCGA-HT-7604 
"AMP PEAK  4(7Q32.3) WILD-TYPE"   "AMP PEAK  4(7Q32.3) MUTATED" 
                   TCGA-HT-7605                    TCGA-HT-7606 
"AMP PEAK  4(7Q32.3) WILD-TYPE" "AMP PEAK  4(7Q32.3) WILD-TYPE" 
                   TCGA-HT-7607                    TCGA-HT-7608 
"AMP PEAK  4(7Q32.3) WILD-TYPE" "AMP PEAK  4(7Q32.3) WILD-TYPE" 
                   TCGA-HT-7609                    TCGA-HT-7610 
"AMP PEAK  4(7Q32.3) WILD-TYPE"   "AMP PEAK  4(7Q32.3) MUTATED" 
                   TCGA-HW-7486                    TCGA-HW-7487 
"AMP PEAK  4(7Q32.3) WILD-TYPE" "AMP PEAK  4(7Q32.3) WILD-TYPE" 
                   TCGA-HW-7489                    TCGA-HW-7490 
"AMP PEAK  4(7Q32.3) WILD-TYPE" "AMP PEAK  4(7Q32.3) WILD-TYPE" 
                   TCGA-HW-7491                    TCGA-HW-7493 
"AMP PEAK  4(7Q32.3) WILD-TYPE" "AMP PEAK  4(7Q32.3) WILD-TYPE" 
                   TCGA-HW-7495                    TCGA-IK-7675 
  "AMP PEAK  4(7Q32.3) MUTATED" "AMP PEAK  4(7Q32.3) WILD-TYPE" 
                   TCGA-IK-8125 
"AMP PEAK  4(7Q32.3) WILD-TYPE" 
                   TCGA-CS-4938                    TCGA-CS-4941 
  "AMP PEAK  4(7Q32.3) MUTATED"   "AMP PEAK  4(7Q32.3) MUTATED" 
                   TCGA-CS-4942                    TCGA-CS-4943 
  "AMP PEAK  4(7Q32.3) MUTATED" "AMP PEAK  4(7Q32.3) WILD-TYPE" 
                   TCGA-CS-4944                    TCGA-CS-5390 
"AMP PEAK  4(7Q32.3) WILD-TYPE" "AMP PEAK  4(7Q32.3) WILD-TYPE" 
                   TCGA-CS-5393                    TCGA-CS-5394 
"AMP PEAK  4(7Q32.3) WILD-TYPE" "AMP PEAK  4(7Q32.3) WILD-TYPE" 
                   TCGA-CS-5395                    TCGA-CS-5396 
  "AMP PEAK  4(7Q32.3) MUTATED"   "AMP PEAK  4(7Q32.3) MUTATED" 
                   TCGA-CS-5397                    TCGA-CS-6186 
  "AMP PEAK  4(7Q32.3) MUTATED"   "AMP PEAK  4(7Q32.3) MUTATED" 
                   TCGA-CS-6188                    TCGA-CS-6290 
  "AMP PEAK  4(7Q32.3) MUTATED" "AMP PEAK  4(7Q32.3) WILD-TYPE" 
                   TCGA-CS-6665                    TCGA-CS-6666 
  "AMP PEAK  4(7Q32.3) MUTATED" "AMP PEAK  4(7Q32.3) WILD-TYPE" 
                   TCGA-CS-6667                    TCGA-CS-6668 
"AMP PEAK  4(7Q32.3) WILD-TYPE" "AMP PEAK  4(7Q32.3) WILD-TYPE" 
                   TCGA-CS-6669                    TCGA-CS-6670 
"AMP PEAK  4(7Q32.3) WILD-TYPE"   "AMP PEAK  4(7Q32.3) MUTATED" 
                   TCGA-DB-5270                    TCGA-DB-5273 
  "AMP PEAK  4(7Q32.3) MUTATED" "AMP PEAK  4(7Q32.3) WILD-TYPE" 
                   TCGA-DB-5274                    TCGA-DB-5275 
"AMP PEAK  4(7Q32.3) WILD-TYPE" "AMP PEAK  4(7Q32.3) WILD-TYPE" 
                   TCGA-DB-5276                    TCGA-DB-5277 
"AMP PEAK  4(7Q32.3) WILD-TYPE" "AMP PEAK  4(7Q32.3) WILD-TYPE" 
                   TCGA-DB-5278                    TCGA-DB-5279 
"AMP PEAK  4(7Q32.3) WILD-TYPE" "AMP PEAK  4(7Q32.3) WILD-TYPE" 
                   TCGA-DB-5280                    TCGA-DB-5281 
"AMP PEAK  4(7Q32.3) WILD-TYPE"   "AMP PEAK  4(7Q32.3) MUTATED" 
                   TCGA-DH-5140                    TCGA-DH-5141 
"AMP PEAK  4(7Q32.3) WILD-TYPE" "AMP PEAK  4(7Q32.3) WILD-TYPE" 
                   TCGA-DH-5142                    TCGA-DH-5143 
"AMP PEAK  4(7Q32.3) WILD-TYPE" "AMP PEAK  4(7Q32.3) WILD-TYPE" 
                   TCGA-DH-5144                    TCGA-DU-5847 
"AMP PEAK  4(7Q32.3) WILD-TYPE" "AMP PEAK  4(7Q32.3) WILD-TYPE" 
                   TCGA-DU-5849                    TCGA-DU-5851 
  "AMP PEAK  4(7Q32.3) MUTATED" "AMP PEAK  4(7Q32.3) WILD-TYPE" 
                   TCGA-DU-5852                    TCGA-DU-5853 
"AMP PEAK  4(7Q32.3) WILD-TYPE" "AMP PEAK  4(7Q32.3) WILD-TYPE" 
                   TCGA-DU-5854                    TCGA-DU-5855 
  "AMP PEAK  4(7Q32.3) MUTATED"   "AMP PEAK  4(7Q32.3) MUTATED" 
                   TCGA-DU-5870                    TCGA-DU-5871 
"AMP PEAK  4(7Q32.3) WILD-TYPE" "AMP PEAK  4(7Q32.3) WILD-TYPE" 
                   TCGA-DU-5872                    TCGA-DU-5874 
  "AMP PEAK  4(7Q32.3) MUTATED" "AMP PEAK  4(7Q32.3) WILD-TYPE" 
                   TCGA-DU-6392                    TCGA-DU-6393 
  "AMP PEAK  4(7Q32.3) MUTATED" "AMP PEAK  4(7Q32.3) WILD-TYPE" 
                   TCGA-DU-6394                    TCGA-DU-6395 
"AMP PEAK  4(7Q32.3) WILD-TYPE"   "AMP PEAK  4(7Q32.3) MUTATED" 
                   TCGA-DU-6396                    TCGA-DU-6397 
"AMP PEAK  4(7Q32.3) WILD-TYPE" "AMP PEAK  4(7Q32.3) WILD-TYPE" 
                   TCGA-DU-6399                    TCGA-DU-6400 
  "AMP PEAK  4(7Q32.3) MUTATED"   "AMP PEAK  4(7Q32.3) MUTATED" 
                   TCGA-DU-6401                    TCGA-DU-6402 
"AMP PEAK  4(7Q32.3) WILD-TYPE"   "AMP PEAK  4(7Q32.3) MUTATED" 
                   TCGA-DU-6403                    TCGA-DU-6404 
  "AMP PEAK  4(7Q32.3) MUTATED"   "AMP PEAK  4(7Q32.3) MUTATED" 
                   TCGA-DU-6405                    TCGA-DU-6406 
  "AMP PEAK  4(7Q32.3) MUTATED"   "AMP PEAK  4(7Q32.3) MUTATED" 
                   TCGA-DU-6407                    TCGA-DU-6408 
  "AMP PEAK  4(7Q32.3) MUTATED" "AMP PEAK  4(7Q32.3) WILD-TYPE" 
                   TCGA-DU-6410                    TCGA-DU-6542 
  "AMP PEAK  4(7Q32.3) MUTATED" "AMP PEAK  4(7Q32.3) WILD-TYPE" 
                   TCGA-DU-7006                    TCGA-DU-7007 
  "AMP PEAK  4(7Q32.3) MUTATED" "AMP PEAK  4(7Q32.3) WILD-TYPE" 
                   TCGA-DU-7008                    TCGA-DU-7009 
  "AMP PEAK  4(7Q32.3) MUTATED"   "AMP PEAK  4(7Q32.3) MUTATED" 
                   TCGA-DU-7010                    TCGA-DU-7011 
  "AMP PEAK  4(7Q32.3) MUTATED"   "AMP PEAK  4(7Q32.3) MUTATED" 
                   TCGA-DU-7012                    TCGA-DU-7013 
  "AMP PEAK  4(7Q32.3) MUTATED"   "AMP PEAK  4(7Q32.3) MUTATED" 
                   TCGA-DU-7014                    TCGA-DU-7015 
  "AMP PEAK  4(7Q32.3) MUTATED"   "AMP PEAK  4(7Q32.3) MUTATED" 
                   TCGA-DU-7018                    TCGA-DU-7019 
"AMP PEAK  4(7Q32.3) WILD-TYPE" "AMP PEAK  4(7Q32.3) WILD-TYPE" 
                   TCGA-DU-7290                    TCGA-DU-7292 
"AMP PEAK  4(7Q32.3) WILD-TYPE"   "AMP PEAK  4(7Q32.3) MUTATED" 
                   TCGA-DU-7294                    TCGA-DU-7298 
"AMP PEAK  4(7Q32.3) WILD-TYPE" "AMP PEAK  4(7Q32.3) WILD-TYPE" 
                   TCGA-DU-7299                    TCGA-DU-7300 
"AMP PEAK  4(7Q32.3) WILD-TYPE" "AMP PEAK  4(7Q32.3) WILD-TYPE" 
                   TCGA-DU-7301                    TCGA-DU-7302 
  "AMP PEAK  4(7Q32.3) MUTATED" "AMP PEAK  4(7Q32.3) WILD-TYPE" 
                   TCGA-DU-7304                    TCGA-DU-7306 
"AMP PEAK  4(7Q32.3) WILD-TYPE"   "AMP PEAK  4(7Q32.3) MUTATED" 
                   TCGA-DU-7309                    TCGA-E1-5302 
  "AMP PEAK  4(7Q32.3) MUTATED"   "AMP PEAK  4(7Q32.3) MUTATED" 
                   TCGA-E1-5303                    TCGA-E1-5304 
"AMP PEAK  4(7Q32.3) WILD-TYPE"   "AMP PEAK  4(7Q32.3) MUTATED" 
                   TCGA-E1-5305                    TCGA-E1-5307 
"AMP PEAK  4(7Q32.3) WILD-TYPE" "AMP PEAK  4(7Q32.3) WILD-TYPE" 
                   TCGA-E1-5311                    TCGA-E1-5318 
"AMP PEAK  4(7Q32.3) WILD-TYPE" "AMP PEAK  4(7Q32.3) WILD-TYPE" 
                   TCGA-E1-5319                    TCGA-E1-5322 
"AMP PEAK  4(7Q32.3) WILD-TYPE"   "AMP PEAK  4(7Q32.3) MUTATED" 
                   TCGA-EZ-7264                    TCGA-FG-5962 
"AMP PEAK  4(7Q32.3) WILD-TYPE"   "AMP PEAK  4(7Q32.3) MUTATED" 
                   TCGA-FG-5963                    TCGA-FG-5964 
"AMP PEAK  4(7Q32.3) WILD-TYPE" "AMP PEAK  4(7Q32.3) WILD-TYPE" 
                   TCGA-FG-5965                    TCGA-FG-6688 
  "AMP PEAK  4(7Q32.3) MUTATED"   "AMP PEAK  4(7Q32.3) MUTATED" 
                   TCGA-FG-6689                    TCGA-FG-6690 
"AMP PEAK  4(7Q32.3) WILD-TYPE"   "AMP PEAK  4(7Q32.3) MUTATED" 
                   TCGA-FG-6691                    TCGA-FG-6692 
  "AMP PEAK  4(7Q32.3) MUTATED"   "AMP PEAK  4(7Q32.3) MUTATED" 
                   TCGA-FG-7634                    TCGA-FG-7636 
  "AMP PEAK  4(7Q32.3) MUTATED" "AMP PEAK  4(7Q32.3) WILD-TYPE" 
                   TCGA-FG-7638                    TCGA-FG-7643 
"AMP PEAK  4(7Q32.3) WILD-TYPE"   "AMP PEAK  4(7Q32.3) MUTATED" 
                   TCGA-FN-7833                    TCGA-HT-7467 
"AMP PEAK  4(7Q32.3) WILD-TYPE" "AMP PEAK  4(7Q32.3) WILD-TYPE" 
                   TCGA-HT-7468                    TCGA-HT-7470 
"AMP PEAK  4(7Q32.3) WILD-TYPE" "AMP PEAK  4(7Q32.3) WILD-TYPE" 
                   TCGA-HT-7472                    TCGA-HT-7473 
"AMP PEAK  4(7Q32.3) WILD-TYPE"   "AMP PEAK  4(7Q32.3) MUTATED" 
                   TCGA-HT-7474                    TCGA-HT-7475 
"AMP PEAK  4(7Q32.3) WILD-TYPE"   "AMP PEAK  4(7Q32.3) MUTATED" 
                   TCGA-HT-7476                    TCGA-HT-7478 
"AMP PEAK  4(7Q32.3) WILD-TYPE" "AMP PEAK  4(7Q32.3) WILD-TYPE" 
                   TCGA-HT-7479                    TCGA-HT-7480 
"AMP PEAK  4(7Q32.3) WILD-TYPE" "AMP PEAK  4(7Q32.3) WILD-TYPE" 
                   TCGA-HT-7481                    TCGA-HT-7482 
"AMP PEAK  4(7Q32.3) WILD-TYPE" "AMP PEAK  4(7Q32.3) WILD-TYPE" 
                   TCGA-HT-7483                    TCGA-HT-7485 
"AMP PEAK  4(7Q32.3) WILD-TYPE" "AMP PEAK  4(7Q32.3) WILD-TYPE" 
                   TCGA-HT-7601                    TCGA-HT-7602 
"AMP PEAK  4(7Q32.3) WILD-TYPE" "AMP PEAK  4(7Q32.3) WILD-TYPE" 
                   TCGA-HT-7603                    TCGA-HT-7604 
"AMP PEAK  4(7Q32.3) WILD-TYPE"   "AMP PEAK  4(7Q32.3) MUTATED" 
                   TCGA-HT-7605                    TCGA-HT-7606 
"AMP PEAK  4(7Q32.3) WILD-TYPE" "AMP PEAK  4(7Q32.3) WILD-TYPE" 
                   TCGA-HT-7607                    TCGA-HT-7608 
"AMP PEAK  4(7Q32.3) WILD-TYPE" "AMP PEAK  4(7Q32.3) WILD-TYPE" 
                   TCGA-HT-7609                    TCGA-HT-7610 
"AMP PEAK  4(7Q32.3) WILD-TYPE"   "AMP PEAK  4(7Q32.3) MUTATED" 
                   TCGA-HW-7486                    TCGA-HW-7487 
"AMP PEAK  4(7Q32.3) WILD-TYPE" "AMP PEAK  4(7Q32.3) WILD-TYPE" 
                   TCGA-HW-7489                    TCGA-HW-7490 
"AMP PEAK  4(7Q32.3) WILD-TYPE" "AMP PEAK  4(7Q32.3) WILD-TYPE" 
                   TCGA-HW-7491                    TCGA-HW-7493 
"AMP PEAK  4(7Q32.3) WILD-TYPE" "AMP PEAK  4(7Q32.3) WILD-TYPE" 
                   TCGA-HW-7495                    TCGA-IK-7675 
  "AMP PEAK  4(7Q32.3) MUTATED" "AMP PEAK  4(7Q32.3) WILD-TYPE" 
                   TCGA-IK-8125 
"AMP PEAK  4(7Q32.3) WILD-TYPE" 
[1] "hr=" "1.4"
D4V2, continuous
D4V3, binary
[1] "tbl2"
                               cls
clus                            [,1] [,2]
  AMP PEAK  4(7Q32.3) MUTATED     30   26
  AMP PEAK  4(7Q32.3) WILD-TYPE   32   57
        clus
vv       AMP PEAK  4(7Q32.3) MUTATED AMP PEAK  4(7Q32.3) WILD-TYPE
  FEMALE                          30                            32
  MALE                            26                            57
D4V4, continuous
D4V5, multiclass
                   clus
vv                  AMP PEAK  4(7Q32.3) MUTATED AMP PEAK  4(7Q32.3) WILD-TYPE
  ASTROCYTOMA                                20                            30
  OLIGOASTROCYTOMA                           15                            21
  OLIGODENDROGLIOMA                          21                            37
D4V6, binary
[1] "tbl2"
                               cls
clus                            [,1] [,2]
  AMP PEAK  4(7Q32.3) MUTATED     16   40
  AMP PEAK  4(7Q32.3) WILD-TYPE   43   46
     clus
vv    AMP PEAK  4(7Q32.3) MUTATED AMP PEAK  4(7Q32.3) WILD-TYPE
  NO                           40                            46
  YES                          16                            43
D4V7, binary
[1] "tbl2"
                               cls
clus                            [,1] [,2]
  AMP PEAK  4(7Q32.3) MUTATED     29   27
  AMP PEAK  4(7Q32.3) WILD-TYPE   45   44
     clus
vv    AMP PEAK  4(7Q32.3) MUTATED AMP PEAK  4(7Q32.3) WILD-TYPE
  NO                           27                            44
  YES                          29                            45

Clustering(5) Variable = Amp Peak  5(8q24.21) mutation analysis
D5V1, survival
                    TCGA-CS-4938                     TCGA-CS-4941 
"AMP PEAK  5(8Q24.21) WILD-TYPE" "AMP PEAK  5(8Q24.21) WILD-TYPE" 
                    TCGA-CS-4942                     TCGA-CS-4943 
"AMP PEAK  5(8Q24.21) WILD-TYPE"   "AMP PEAK  5(8Q24.21) MUTATED" 
                    TCGA-CS-4944                     TCGA-CS-5390 
"AMP PEAK  5(8Q24.21) WILD-TYPE" "AMP PEAK  5(8Q24.21) WILD-TYPE" 
                    TCGA-CS-5393                     TCGA-CS-5394 
  "AMP PEAK  5(8Q24.21) MUTATED" "AMP PEAK  5(8Q24.21) WILD-TYPE" 
                    TCGA-CS-5395                     TCGA-CS-5396 
"AMP PEAK  5(8Q24.21) WILD-TYPE" "AMP PEAK  5(8Q24.21) WILD-TYPE" 
                    TCGA-CS-5397                     TCGA-CS-6186 
"AMP PEAK  5(8Q24.21) WILD-TYPE" "AMP PEAK  5(8Q24.21) WILD-TYPE" 
                    TCGA-CS-6188                     TCGA-CS-6290 
"AMP PEAK  5(8Q24.21) WILD-TYPE"   "AMP PEAK  5(8Q24.21) MUTATED" 
                    TCGA-CS-6665                     TCGA-CS-6666 
  "AMP PEAK  5(8Q24.21) MUTATED"   "AMP PEAK  5(8Q24.21) MUTATED" 
                    TCGA-CS-6667                     TCGA-CS-6668 
"AMP PEAK  5(8Q24.21) WILD-TYPE" "AMP PEAK  5(8Q24.21) WILD-TYPE" 
                    TCGA-CS-6669                     TCGA-CS-6670 
"AMP PEAK  5(8Q24.21) WILD-TYPE" "AMP PEAK  5(8Q24.21) WILD-TYPE" 
                    TCGA-DB-5270                     TCGA-DB-5273 
"AMP PEAK  5(8Q24.21) WILD-TYPE" "AMP PEAK  5(8Q24.21) WILD-TYPE" 
                    TCGA-DB-5274                     TCGA-DB-5275 
"AMP PEAK  5(8Q24.21) WILD-TYPE" "AMP PEAK  5(8Q24.21) WILD-TYPE" 
                    TCGA-DB-5276                     TCGA-DB-5277 
"AMP PEAK  5(8Q24.21) WILD-TYPE"   "AMP PEAK  5(8Q24.21) MUTATED" 
                    TCGA-DB-5278                     TCGA-DB-5279 
"AMP PEAK  5(8Q24.21) WILD-TYPE" "AMP PEAK  5(8Q24.21) WILD-TYPE" 
                    TCGA-DB-5280                     TCGA-DB-5281 
"AMP PEAK  5(8Q24.21) WILD-TYPE"   "AMP PEAK  5(8Q24.21) MUTATED" 
                    TCGA-DH-5140                     TCGA-DH-5141 
"AMP PEAK  5(8Q24.21) WILD-TYPE" "AMP PEAK  5(8Q24.21) WILD-TYPE" 
                    TCGA-DH-5142                     TCGA-DH-5143 
"AMP PEAK  5(8Q24.21) WILD-TYPE"   "AMP PEAK  5(8Q24.21) MUTATED" 
                    TCGA-DH-5144                     TCGA-DU-5847 
"AMP PEAK  5(8Q24.21) WILD-TYPE" "AMP PEAK  5(8Q24.21) WILD-TYPE" 
                    TCGA-DU-5849                     TCGA-DU-5851 
"AMP PEAK  5(8Q24.21) WILD-TYPE" "AMP PEAK  5(8Q24.21) WILD-TYPE" 
                    TCGA-DU-5852                     TCGA-DU-5853 
"AMP PEAK  5(8Q24.21) WILD-TYPE" "AMP PEAK  5(8Q24.21) WILD-TYPE" 
                    TCGA-DU-5854                     TCGA-DU-5855 
"AMP PEAK  5(8Q24.21) WILD-TYPE" "AMP PEAK  5(8Q24.21) WILD-TYPE" 
                    TCGA-DU-5870                     TCGA-DU-5871 
"AMP PEAK  5(8Q24.21) WILD-TYPE"   "AMP PEAK  5(8Q24.21) MUTATED" 
                    TCGA-DU-5872                     TCGA-DU-5874 
"AMP PEAK  5(8Q24.21) WILD-TYPE" "AMP PEAK  5(8Q24.21) WILD-TYPE" 
                    TCGA-DU-6392                     TCGA-DU-6393 
"AMP PEAK  5(8Q24.21) WILD-TYPE" "AMP PEAK  5(8Q24.21) WILD-TYPE" 
                    TCGA-DU-6394                     TCGA-DU-6395 
"AMP PEAK  5(8Q24.21) WILD-TYPE" "AMP PEAK  5(8Q24.21) WILD-TYPE" 
                    TCGA-DU-6396                     TCGA-DU-6397 
  "AMP PEAK  5(8Q24.21) MUTATED" "AMP PEAK  5(8Q24.21) WILD-TYPE" 
                    TCGA-DU-6399                     TCGA-DU-6400 
  "AMP PEAK  5(8Q24.21) MUTATED" "AMP PEAK  5(8Q24.21) WILD-TYPE" 
                    TCGA-DU-6401                     TCGA-DU-6402 
"AMP PEAK  5(8Q24.21) WILD-TYPE" "AMP PEAK  5(8Q24.21) WILD-TYPE" 
                    TCGA-DU-6403                     TCGA-DU-6404 
"AMP PEAK  5(8Q24.21) WILD-TYPE" "AMP PEAK  5(8Q24.21) WILD-TYPE" 
                    TCGA-DU-6405                     TCGA-DU-6406 
"AMP PEAK  5(8Q24.21) WILD-TYPE" "AMP PEAK  5(8Q24.21) WILD-TYPE" 
                    TCGA-DU-6407                     TCGA-DU-6408 
  "AMP PEAK  5(8Q24.21) MUTATED"   "AMP PEAK  5(8Q24.21) MUTATED" 
                    TCGA-DU-6410                     TCGA-DU-6542 
"AMP PEAK  5(8Q24.21) WILD-TYPE" "AMP PEAK  5(8Q24.21) WILD-TYPE" 
                    TCGA-DU-7006                     TCGA-DU-7007 
"AMP PEAK  5(8Q24.21) WILD-TYPE" "AMP PEAK  5(8Q24.21) WILD-TYPE" 
                    TCGA-DU-7008                     TCGA-DU-7009 
"AMP PEAK  5(8Q24.21) WILD-TYPE" "AMP PEAK  5(8Q24.21) WILD-TYPE" 
                    TCGA-DU-7010                     TCGA-DU-7011 
"AMP PEAK  5(8Q24.21) WILD-TYPE" "AMP PEAK  5(8Q24.21) WILD-TYPE" 
                    TCGA-DU-7012                     TCGA-DU-7013 
"AMP PEAK  5(8Q24.21) WILD-TYPE"   "AMP PEAK  5(8Q24.21) MUTATED" 
                    TCGA-DU-7014                     TCGA-DU-7015 
  "AMP PEAK  5(8Q24.21) MUTATED"   "AMP PEAK  5(8Q24.21) MUTATED" 
                    TCGA-DU-7018                     TCGA-DU-7019 
"AMP PEAK  5(8Q24.21) WILD-TYPE" "AMP PEAK  5(8Q24.21) WILD-TYPE" 
                    TCGA-DU-7290                     TCGA-DU-7292 
"AMP PEAK  5(8Q24.21) WILD-TYPE" "AMP PEAK  5(8Q24.21) WILD-TYPE" 
                    TCGA-DU-7294                     TCGA-DU-7298 
"AMP PEAK  5(8Q24.21) WILD-TYPE" "AMP PEAK  5(8Q24.21) WILD-TYPE" 
                    TCGA-DU-7299                     TCGA-DU-7300 
"AMP PEAK  5(8Q24.21) WILD-TYPE" "AMP PEAK  5(8Q24.21) WILD-TYPE" 
                    TCGA-DU-7301                     TCGA-DU-7302 
"AMP PEAK  5(8Q24.21) WILD-TYPE" "AMP PEAK  5(8Q24.21) WILD-TYPE" 
                    TCGA-DU-7304                     TCGA-DU-7306 
  "AMP PEAK  5(8Q24.21) MUTATED" "AMP PEAK  5(8Q24.21) WILD-TYPE" 
                    TCGA-DU-7309                     TCGA-E1-5302 
"AMP PEAK  5(8Q24.21) WILD-TYPE" "AMP PEAK  5(8Q24.21) WILD-TYPE" 
                    TCGA-E1-5303                     TCGA-E1-5304 
  "AMP PEAK  5(8Q24.21) MUTATED"   "AMP PEAK  5(8Q24.21) MUTATED" 
                    TCGA-E1-5305                     TCGA-E1-5307 
  "AMP PEAK  5(8Q24.21) MUTATED"   "AMP PEAK  5(8Q24.21) MUTATED" 
                    TCGA-E1-5311                     TCGA-E1-5318 
"AMP PEAK  5(8Q24.21) WILD-TYPE" "AMP PEAK  5(8Q24.21) WILD-TYPE" 
                    TCGA-E1-5319                     TCGA-E1-5322 
"AMP PEAK  5(8Q24.21) WILD-TYPE" "AMP PEAK  5(8Q24.21) WILD-TYPE" 
                    TCGA-EZ-7264                     TCGA-FG-5962 
"AMP PEAK  5(8Q24.21) WILD-TYPE"   "AMP PEAK  5(8Q24.21) MUTATED" 
                    TCGA-FG-5963                     TCGA-FG-5964 
"AMP PEAK  5(8Q24.21) WILD-TYPE"   "AMP PEAK  5(8Q24.21) MUTATED" 
                    TCGA-FG-5965                     TCGA-FG-6688 
"AMP PEAK  5(8Q24.21) WILD-TYPE" "AMP PEAK  5(8Q24.21) WILD-TYPE" 
                    TCGA-FG-6689                     TCGA-FG-6690 
"AMP PEAK  5(8Q24.21) WILD-TYPE" "AMP PEAK  5(8Q24.21) WILD-TYPE" 
                    TCGA-FG-6691                     TCGA-FG-6692 
  "AMP PEAK  5(8Q24.21) MUTATED" "AMP PEAK  5(8Q24.21) WILD-TYPE" 
                    TCGA-FG-7634                     TCGA-FG-7636 
  "AMP PEAK  5(8Q24.21) MUTATED" "AMP PEAK  5(8Q24.21) WILD-TYPE" 
                    TCGA-FG-7638                     TCGA-FG-7643 
"AMP PEAK  5(8Q24.21) WILD-TYPE" "AMP PEAK  5(8Q24.21) WILD-TYPE" 
                    TCGA-FN-7833                     TCGA-HT-7467 
"AMP PEAK  5(8Q24.21) WILD-TYPE" "AMP PEAK  5(8Q24.21) WILD-TYPE" 
                    TCGA-HT-7468                     TCGA-HT-7470 
"AMP PEAK  5(8Q24.21) WILD-TYPE" "AMP PEAK  5(8Q24.21) WILD-TYPE" 
                    TCGA-HT-7472                     TCGA-HT-7473 
"AMP PEAK  5(8Q24.21) WILD-TYPE"   "AMP PEAK  5(8Q24.21) MUTATED" 
                    TCGA-HT-7474                     TCGA-HT-7475 
"AMP PEAK  5(8Q24.21) WILD-TYPE"   "AMP PEAK  5(8Q24.21) MUTATED" 
                    TCGA-HT-7476                     TCGA-HT-7478 
  "AMP PEAK  5(8Q24.21) MUTATED" "AMP PEAK  5(8Q24.21) WILD-TYPE" 
                    TCGA-HT-7479                     TCGA-HT-7480 
  "AMP PEAK  5(8Q24.21) MUTATED" "AMP PEAK  5(8Q24.21) WILD-TYPE" 
                    TCGA-HT-7481                     TCGA-HT-7482 
"AMP PEAK  5(8Q24.21) WILD-TYPE"   "AMP PEAK  5(8Q24.21) MUTATED" 
                    TCGA-HT-7483                     TCGA-HT-7485 
"AMP PEAK  5(8Q24.21) WILD-TYPE" "AMP PEAK  5(8Q24.21) WILD-TYPE" 
                    TCGA-HT-7601                     TCGA-HT-7602 
"AMP PEAK  5(8Q24.21) WILD-TYPE" "AMP PEAK  5(8Q24.21) WILD-TYPE" 
                    TCGA-HT-7603                     TCGA-HT-7604 
"AMP PEAK  5(8Q24.21) WILD-TYPE"   "AMP PEAK  5(8Q24.21) MUTATED" 
                    TCGA-HT-7605                     TCGA-HT-7606 
"AMP PEAK  5(8Q24.21) WILD-TYPE" "AMP PEAK  5(8Q24.21) WILD-TYPE" 
                    TCGA-HT-7607                     TCGA-HT-7608 
"AMP PEAK  5(8Q24.21) WILD-TYPE" "AMP PEAK  5(8Q24.21) WILD-TYPE" 
                    TCGA-HT-7609                     TCGA-HT-7610 
"AMP PEAK  5(8Q24.21) WILD-TYPE" "AMP PEAK  5(8Q24.21) WILD-TYPE" 
                    TCGA-HW-7486                     TCGA-HW-7487 
"AMP PEAK  5(8Q24.21) WILD-TYPE" "AMP PEAK  5(8Q24.21) WILD-TYPE" 
                    TCGA-HW-7489                     TCGA-HW-7490 
"AMP PEAK  5(8Q24.21) WILD-TYPE" "AMP PEAK  5(8Q24.21) WILD-TYPE" 
                    TCGA-HW-7491                     TCGA-HW-7493 
"AMP PEAK  5(8Q24.21) WILD-TYPE" "AMP PEAK  5(8Q24.21) WILD-TYPE" 
                    TCGA-HW-7495                     TCGA-IK-7675 
"AMP PEAK  5(8Q24.21) WILD-TYPE" "AMP PEAK  5(8Q24.21) WILD-TYPE" 
                    TCGA-IK-8125 
"AMP PEAK  5(8Q24.21) WILD-TYPE" 
                    TCGA-CS-4938                     TCGA-CS-4941 
"AMP PEAK  5(8Q24.21) WILD-TYPE" "AMP PEAK  5(8Q24.21) WILD-TYPE" 
                    TCGA-CS-4942                     TCGA-CS-4943 
"AMP PEAK  5(8Q24.21) WILD-TYPE"   "AMP PEAK  5(8Q24.21) MUTATED" 
                    TCGA-CS-4944                     TCGA-CS-5390 
"AMP PEAK  5(8Q24.21) WILD-TYPE" "AMP PEAK  5(8Q24.21) WILD-TYPE" 
                    TCGA-CS-5393                     TCGA-CS-5394 
  "AMP PEAK  5(8Q24.21) MUTATED" "AMP PEAK  5(8Q24.21) WILD-TYPE" 
                    TCGA-CS-5395                     TCGA-CS-5396 
"AMP PEAK  5(8Q24.21) WILD-TYPE" "AMP PEAK  5(8Q24.21) WILD-TYPE" 
                    TCGA-CS-5397                     TCGA-CS-6186 
"AMP PEAK  5(8Q24.21) WILD-TYPE" "AMP PEAK  5(8Q24.21) WILD-TYPE" 
                    TCGA-CS-6188                     TCGA-CS-6290 
"AMP PEAK  5(8Q24.21) WILD-TYPE"   "AMP PEAK  5(8Q24.21) MUTATED" 
                    TCGA-CS-6665                     TCGA-CS-6666 
  "AMP PEAK  5(8Q24.21) MUTATED"   "AMP PEAK  5(8Q24.21) MUTATED" 
                    TCGA-CS-6667                     TCGA-CS-6668 
"AMP PEAK  5(8Q24.21) WILD-TYPE" "AMP PEAK  5(8Q24.21) WILD-TYPE" 
                    TCGA-CS-6669                     TCGA-CS-6670 
"AMP PEAK  5(8Q24.21) WILD-TYPE" "AMP PEAK  5(8Q24.21) WILD-TYPE" 
                    TCGA-DB-5270                     TCGA-DB-5273 
"AMP PEAK  5(8Q24.21) WILD-TYPE" "AMP PEAK  5(8Q24.21) WILD-TYPE" 
                    TCGA-DB-5274                     TCGA-DB-5275 
"AMP PEAK  5(8Q24.21) WILD-TYPE" "AMP PEAK  5(8Q24.21) WILD-TYPE" 
                    TCGA-DB-5276                     TCGA-DB-5277 
"AMP PEAK  5(8Q24.21) WILD-TYPE"   "AMP PEAK  5(8Q24.21) MUTATED" 
                    TCGA-DB-5278                     TCGA-DB-5279 
"AMP PEAK  5(8Q24.21) WILD-TYPE" "AMP PEAK  5(8Q24.21) WILD-TYPE" 
                    TCGA-DB-5280                     TCGA-DB-5281 
"AMP PEAK  5(8Q24.21) WILD-TYPE"   "AMP PEAK  5(8Q24.21) MUTATED" 
                    TCGA-DH-5140                     TCGA-DH-5141 
"AMP PEAK  5(8Q24.21) WILD-TYPE" "AMP PEAK  5(8Q24.21) WILD-TYPE" 
                    TCGA-DH-5142                     TCGA-DH-5143 
"AMP PEAK  5(8Q24.21) WILD-TYPE"   "AMP PEAK  5(8Q24.21) MUTATED" 
                    TCGA-DH-5144                     TCGA-DU-5847 
"AMP PEAK  5(8Q24.21) WILD-TYPE" "AMP PEAK  5(8Q24.21) WILD-TYPE" 
                    TCGA-DU-5849                     TCGA-DU-5851 
"AMP PEAK  5(8Q24.21) WILD-TYPE" "AMP PEAK  5(8Q24.21) WILD-TYPE" 
                    TCGA-DU-5852                     TCGA-DU-5853 
"AMP PEAK  5(8Q24.21) WILD-TYPE" "AMP PEAK  5(8Q24.21) WILD-TYPE" 
                    TCGA-DU-5854                     TCGA-DU-5855 
"AMP PEAK  5(8Q24.21) WILD-TYPE" "AMP PEAK  5(8Q24.21) WILD-TYPE" 
                    TCGA-DU-5870                     TCGA-DU-5871 
"AMP PEAK  5(8Q24.21) WILD-TYPE"   "AMP PEAK  5(8Q24.21) MUTATED" 
                    TCGA-DU-5872                     TCGA-DU-5874 
"AMP PEAK  5(8Q24.21) WILD-TYPE" "AMP PEAK  5(8Q24.21) WILD-TYPE" 
                    TCGA-DU-6392                     TCGA-DU-6393 
"AMP PEAK  5(8Q24.21) WILD-TYPE" "AMP PEAK  5(8Q24.21) WILD-TYPE" 
                    TCGA-DU-6394                     TCGA-DU-6395 
"AMP PEAK  5(8Q24.21) WILD-TYPE" "AMP PEAK  5(8Q24.21) WILD-TYPE" 
                    TCGA-DU-6396                     TCGA-DU-6397 
  "AMP PEAK  5(8Q24.21) MUTATED" "AMP PEAK  5(8Q24.21) WILD-TYPE" 
                    TCGA-DU-6399                     TCGA-DU-6400 
  "AMP PEAK  5(8Q24.21) MUTATED" "AMP PEAK  5(8Q24.21) WILD-TYPE" 
                    TCGA-DU-6401                     TCGA-DU-6402 
"AMP PEAK  5(8Q24.21) WILD-TYPE" "AMP PEAK  5(8Q24.21) WILD-TYPE" 
                    TCGA-DU-6403                     TCGA-DU-6404 
"AMP PEAK  5(8Q24.21) WILD-TYPE" "AMP PEAK  5(8Q24.21) WILD-TYPE" 
                    TCGA-DU-6405                     TCGA-DU-6406 
"AMP PEAK  5(8Q24.21) WILD-TYPE" "AMP PEAK  5(8Q24.21) WILD-TYPE" 
                    TCGA-DU-6407                     TCGA-DU-6408 
  "AMP PEAK  5(8Q24.21) MUTATED"   "AMP PEAK  5(8Q24.21) MUTATED" 
                    TCGA-DU-6410                     TCGA-DU-6542 
"AMP PEAK  5(8Q24.21) WILD-TYPE" "AMP PEAK  5(8Q24.21) WILD-TYPE" 
                    TCGA-DU-7006                     TCGA-DU-7007 
"AMP PEAK  5(8Q24.21) WILD-TYPE" "AMP PEAK  5(8Q24.21) WILD-TYPE" 
                    TCGA-DU-7008                     TCGA-DU-7009 
"AMP PEAK  5(8Q24.21) WILD-TYPE" "AMP PEAK  5(8Q24.21) WILD-TYPE" 
                    TCGA-DU-7010                     TCGA-DU-7011 
"AMP PEAK  5(8Q24.21) WILD-TYPE" "AMP PEAK  5(8Q24.21) WILD-TYPE" 
                    TCGA-DU-7012                     TCGA-DU-7013 
"AMP PEAK  5(8Q24.21) WILD-TYPE"   "AMP PEAK  5(8Q24.21) MUTATED" 
                    TCGA-DU-7014                     TCGA-DU-7015 
  "AMP PEAK  5(8Q24.21) MUTATED"   "AMP PEAK  5(8Q24.21) MUTATED" 
                    TCGA-DU-7018                     TCGA-DU-7019 
"AMP PEAK  5(8Q24.21) WILD-TYPE" "AMP PEAK  5(8Q24.21) WILD-TYPE" 
                    TCGA-DU-7290                     TCGA-DU-7292 
"AMP PEAK  5(8Q24.21) WILD-TYPE" "AMP PEAK  5(8Q24.21) WILD-TYPE" 
                    TCGA-DU-7294                     TCGA-DU-7298 
"AMP PEAK  5(8Q24.21) WILD-TYPE" "AMP PEAK  5(8Q24.21) WILD-TYPE" 
                    TCGA-DU-7299                     TCGA-DU-7300 
"AMP PEAK  5(8Q24.21) WILD-TYPE" "AMP PEAK  5(8Q24.21) WILD-TYPE" 
                    TCGA-DU-7301                     TCGA-DU-7302 
"AMP PEAK  5(8Q24.21) WILD-TYPE" "AMP PEAK  5(8Q24.21) WILD-TYPE" 
                    TCGA-DU-7304                     TCGA-DU-7306 
  "AMP PEAK  5(8Q24.21) MUTATED" "AMP PEAK  5(8Q24.21) WILD-TYPE" 
                    TCGA-DU-7309                     TCGA-E1-5302 
"AMP PEAK  5(8Q24.21) WILD-TYPE" "AMP PEAK  5(8Q24.21) WILD-TYPE" 
                    TCGA-E1-5303                     TCGA-E1-5304 
  "AMP PEAK  5(8Q24.21) MUTATED"   "AMP PEAK  5(8Q24.21) MUTATED" 
                    TCGA-E1-5305                     TCGA-E1-5307 
  "AMP PEAK  5(8Q24.21) MUTATED"   "AMP PEAK  5(8Q24.21) MUTATED" 
                    TCGA-E1-5311                     TCGA-E1-5318 
"AMP PEAK  5(8Q24.21) WILD-TYPE" "AMP PEAK  5(8Q24.21) WILD-TYPE" 
                    TCGA-E1-5319                     TCGA-E1-5322 
"AMP PEAK  5(8Q24.21) WILD-TYPE" "AMP PEAK  5(8Q24.21) WILD-TYPE" 
                    TCGA-EZ-7264                     TCGA-FG-5962 
"AMP PEAK  5(8Q24.21) WILD-TYPE"   "AMP PEAK  5(8Q24.21) MUTATED" 
                    TCGA-FG-5963                     TCGA-FG-5964 
"AMP PEAK  5(8Q24.21) WILD-TYPE"   "AMP PEAK  5(8Q24.21) MUTATED" 
                    TCGA-FG-5965                     TCGA-FG-6688 
"AMP PEAK  5(8Q24.21) WILD-TYPE" "AMP PEAK  5(8Q24.21) WILD-TYPE" 
                    TCGA-FG-6689                     TCGA-FG-6690 
"AMP PEAK  5(8Q24.21) WILD-TYPE" "AMP PEAK  5(8Q24.21) WILD-TYPE" 
                    TCGA-FG-6691                     TCGA-FG-6692 
  "AMP PEAK  5(8Q24.21) MUTATED" "AMP PEAK  5(8Q24.21) WILD-TYPE" 
                    TCGA-FG-7634                     TCGA-FG-7636 
  "AMP PEAK  5(8Q24.21) MUTATED" "AMP PEAK  5(8Q24.21) WILD-TYPE" 
                    TCGA-FG-7638                     TCGA-FG-7643 
"AMP PEAK  5(8Q24.21) WILD-TYPE" "AMP PEAK  5(8Q24.21) WILD-TYPE" 
                    TCGA-FN-7833                     TCGA-HT-7467 
"AMP PEAK  5(8Q24.21) WILD-TYPE" "AMP PEAK  5(8Q24.21) WILD-TYPE" 
                    TCGA-HT-7468                     TCGA-HT-7470 
"AMP PEAK  5(8Q24.21) WILD-TYPE" "AMP PEAK  5(8Q24.21) WILD-TYPE" 
                    TCGA-HT-7472                     TCGA-HT-7473 
"AMP PEAK  5(8Q24.21) WILD-TYPE"   "AMP PEAK  5(8Q24.21) MUTATED" 
                    TCGA-HT-7474                     TCGA-HT-7475 
"AMP PEAK  5(8Q24.21) WILD-TYPE"   "AMP PEAK  5(8Q24.21) MUTATED" 
                    TCGA-HT-7476                     TCGA-HT-7478 
  "AMP PEAK  5(8Q24.21) MUTATED" "AMP PEAK  5(8Q24.21) WILD-TYPE" 
                    TCGA-HT-7479                     TCGA-HT-7480 
  "AMP PEAK  5(8Q24.21) MUTATED" "AMP PEAK  5(8Q24.21) WILD-TYPE" 
                    TCGA-HT-7481                     TCGA-HT-7482 
"AMP PEAK  5(8Q24.21) WILD-TYPE"   "AMP PEAK  5(8Q24.21) MUTATED" 
                    TCGA-HT-7483                     TCGA-HT-7485 
"AMP PEAK  5(8Q24.21) WILD-TYPE" "AMP PEAK  5(8Q24.21) WILD-TYPE" 
                    TCGA-HT-7601                     TCGA-HT-7602 
"AMP PEAK  5(8Q24.21) WILD-TYPE" "AMP PEAK  5(8Q24.21) WILD-TYPE" 
                    TCGA-HT-7603                     TCGA-HT-7604 
"AMP PEAK  5(8Q24.21) WILD-TYPE"   "AMP PEAK  5(8Q24.21) MUTATED" 
                    TCGA-HT-7605                     TCGA-HT-7606 
"AMP PEAK  5(8Q24.21) WILD-TYPE" "AMP PEAK  5(8Q24.21) WILD-TYPE" 
                    TCGA-HT-7607                     TCGA-HT-7608 
"AMP PEAK  5(8Q24.21) WILD-TYPE" "AMP PEAK  5(8Q24.21) WILD-TYPE" 
                    TCGA-HT-7609                     TCGA-HT-7610 
"AMP PEAK  5(8Q24.21) WILD-TYPE" "AMP PEAK  5(8Q24.21) WILD-TYPE" 
                    TCGA-HW-7486                     TCGA-HW-7487 
"AMP PEAK  5(8Q24.21) WILD-TYPE" "AMP PEAK  5(8Q24.21) WILD-TYPE" 
                    TCGA-HW-7489                     TCGA-HW-7490 
"AMP PEAK  5(8Q24.21) WILD-TYPE" "AMP PEAK  5(8Q24.21) WILD-TYPE" 
                    TCGA-HW-7491                     TCGA-HW-7493 
"AMP PEAK  5(8Q24.21) WILD-TYPE" "AMP PEAK  5(8Q24.21) WILD-TYPE" 
                    TCGA-HW-7495                     TCGA-IK-7675 
"AMP PEAK  5(8Q24.21) WILD-TYPE" "AMP PEAK  5(8Q24.21) WILD-TYPE" 
                    TCGA-IK-8125 
"AMP PEAK  5(8Q24.21) WILD-TYPE" 
                    TCGA-CS-4938                     TCGA-CS-4941 
"AMP PEAK  5(8Q24.21) WILD-TYPE" "AMP PEAK  5(8Q24.21) WILD-TYPE" 
                    TCGA-CS-4942                     TCGA-CS-4943 
"AMP PEAK  5(8Q24.21) WILD-TYPE"   "AMP PEAK  5(8Q24.21) MUTATED" 
                    TCGA-CS-4944                     TCGA-CS-5390 
"AMP PEAK  5(8Q24.21) WILD-TYPE" "AMP PEAK  5(8Q24.21) WILD-TYPE" 
                    TCGA-CS-5393                     TCGA-CS-5394 
  "AMP PEAK  5(8Q24.21) MUTATED" "AMP PEAK  5(8Q24.21) WILD-TYPE" 
                    TCGA-CS-5395                     TCGA-CS-5396 
"AMP PEAK  5(8Q24.21) WILD-TYPE" "AMP PEAK  5(8Q24.21) WILD-TYPE" 
                    TCGA-CS-5397                     TCGA-CS-6186 
"AMP PEAK  5(8Q24.21) WILD-TYPE" "AMP PEAK  5(8Q24.21) WILD-TYPE" 
                    TCGA-CS-6188                     TCGA-CS-6290 
"AMP PEAK  5(8Q24.21) WILD-TYPE"   "AMP PEAK  5(8Q24.21) MUTATED" 
                    TCGA-CS-6665                     TCGA-CS-6666 
  "AMP PEAK  5(8Q24.21) MUTATED"   "AMP PEAK  5(8Q24.21) MUTATED" 
                    TCGA-CS-6667                     TCGA-CS-6668 
"AMP PEAK  5(8Q24.21) WILD-TYPE" "AMP PEAK  5(8Q24.21) WILD-TYPE" 
                    TCGA-CS-6669                     TCGA-CS-6670 
"AMP PEAK  5(8Q24.21) WILD-TYPE" "AMP PEAK  5(8Q24.21) WILD-TYPE" 
                    TCGA-DB-5270                     TCGA-DB-5273 
"AMP PEAK  5(8Q24.21) WILD-TYPE" "AMP PEAK  5(8Q24.21) WILD-TYPE" 
                    TCGA-DB-5274                     TCGA-DB-5275 
"AMP PEAK  5(8Q24.21) WILD-TYPE" "AMP PEAK  5(8Q24.21) WILD-TYPE" 
                    TCGA-DB-5276                     TCGA-DB-5277 
"AMP PEAK  5(8Q24.21) WILD-TYPE"   "AMP PEAK  5(8Q24.21) MUTATED" 
                    TCGA-DB-5278                     TCGA-DB-5279 
"AMP PEAK  5(8Q24.21) WILD-TYPE" "AMP PEAK  5(8Q24.21) WILD-TYPE" 
                    TCGA-DB-5280                     TCGA-DB-5281 
"AMP PEAK  5(8Q24.21) WILD-TYPE"   "AMP PEAK  5(8Q24.21) MUTATED" 
                    TCGA-DH-5140                     TCGA-DH-5141 
"AMP PEAK  5(8Q24.21) WILD-TYPE" "AMP PEAK  5(8Q24.21) WILD-TYPE" 
                    TCGA-DH-5142                     TCGA-DH-5143 
"AMP PEAK  5(8Q24.21) WILD-TYPE"   "AMP PEAK  5(8Q24.21) MUTATED" 
                    TCGA-DH-5144                     TCGA-DU-5847 
"AMP PEAK  5(8Q24.21) WILD-TYPE" "AMP PEAK  5(8Q24.21) WILD-TYPE" 
                    TCGA-DU-5849                     TCGA-DU-5851 
"AMP PEAK  5(8Q24.21) WILD-TYPE" "AMP PEAK  5(8Q24.21) WILD-TYPE" 
                    TCGA-DU-5852                     TCGA-DU-5853 
"AMP PEAK  5(8Q24.21) WILD-TYPE" "AMP PEAK  5(8Q24.21) WILD-TYPE" 
                    TCGA-DU-5854                     TCGA-DU-5855 
"AMP PEAK  5(8Q24.21) WILD-TYPE" "AMP PEAK  5(8Q24.21) WILD-TYPE" 
                    TCGA-DU-5870                     TCGA-DU-5871 
"AMP PEAK  5(8Q24.21) WILD-TYPE"   "AMP PEAK  5(8Q24.21) MUTATED" 
                    TCGA-DU-5872                     TCGA-DU-5874 
"AMP PEAK  5(8Q24.21) WILD-TYPE" "AMP PEAK  5(8Q24.21) WILD-TYPE" 
                    TCGA-DU-6392                     TCGA-DU-6393 
"AMP PEAK  5(8Q24.21) WILD-TYPE" "AMP PEAK  5(8Q24.21) WILD-TYPE" 
                    TCGA-DU-6394                     TCGA-DU-6395 
"AMP PEAK  5(8Q24.21) WILD-TYPE" "AMP PEAK  5(8Q24.21) WILD-TYPE" 
                    TCGA-DU-6396                     TCGA-DU-6397 
  "AMP PEAK  5(8Q24.21) MUTATED" "AMP PEAK  5(8Q24.21) WILD-TYPE" 
                    TCGA-DU-6399                     TCGA-DU-6400 
  "AMP PEAK  5(8Q24.21) MUTATED" "AMP PEAK  5(8Q24.21) WILD-TYPE" 
                    TCGA-DU-6401                     TCGA-DU-6402 
"AMP PEAK  5(8Q24.21) WILD-TYPE" "AMP PEAK  5(8Q24.21) WILD-TYPE" 
                    TCGA-DU-6403                     TCGA-DU-6404 
"AMP PEAK  5(8Q24.21) WILD-TYPE" "AMP PEAK  5(8Q24.21) WILD-TYPE" 
                    TCGA-DU-6405                     TCGA-DU-6406 
"AMP PEAK  5(8Q24.21) WILD-TYPE" "AMP PEAK  5(8Q24.21) WILD-TYPE" 
                    TCGA-DU-6407                     TCGA-DU-6408 
  "AMP PEAK  5(8Q24.21) MUTATED"   "AMP PEAK  5(8Q24.21) MUTATED" 
                    TCGA-DU-6410                     TCGA-DU-6542 
"AMP PEAK  5(8Q24.21) WILD-TYPE" "AMP PEAK  5(8Q24.21) WILD-TYPE" 
                    TCGA-DU-7006                     TCGA-DU-7007 
"AMP PEAK  5(8Q24.21) WILD-TYPE" "AMP PEAK  5(8Q24.21) WILD-TYPE" 
                    TCGA-DU-7008                     TCGA-DU-7009 
"AMP PEAK  5(8Q24.21) WILD-TYPE" "AMP PEAK  5(8Q24.21) WILD-TYPE" 
                    TCGA-DU-7010                     TCGA-DU-7011 
"AMP PEAK  5(8Q24.21) WILD-TYPE" "AMP PEAK  5(8Q24.21) WILD-TYPE" 
                    TCGA-DU-7012                     TCGA-DU-7013 
"AMP PEAK  5(8Q24.21) WILD-TYPE"   "AMP PEAK  5(8Q24.21) MUTATED" 
                    TCGA-DU-7014                     TCGA-DU-7015 
  "AMP PEAK  5(8Q24.21) MUTATED"   "AMP PEAK  5(8Q24.21) MUTATED" 
                    TCGA-DU-7018                     TCGA-DU-7019 
"AMP PEAK  5(8Q24.21) WILD-TYPE" "AMP PEAK  5(8Q24.21) WILD-TYPE" 
                    TCGA-DU-7290                     TCGA-DU-7292 
"AMP PEAK  5(8Q24.21) WILD-TYPE" "AMP PEAK  5(8Q24.21) WILD-TYPE" 
                    TCGA-DU-7294                     TCGA-DU-7298 
"AMP PEAK  5(8Q24.21) WILD-TYPE" "AMP PEAK  5(8Q24.21) WILD-TYPE" 
                    TCGA-DU-7299                     TCGA-DU-7300 
"AMP PEAK  5(8Q24.21) WILD-TYPE" "AMP PEAK  5(8Q24.21) WILD-TYPE" 
                    TCGA-DU-7301                     TCGA-DU-7302 
"AMP PEAK  5(8Q24.21) WILD-TYPE" "AMP PEAK  5(8Q24.21) WILD-TYPE" 
                    TCGA-DU-7304                     TCGA-DU-7306 
  "AMP PEAK  5(8Q24.21) MUTATED" "AMP PEAK  5(8Q24.21) WILD-TYPE" 
                    TCGA-DU-7309                     TCGA-E1-5302 
"AMP PEAK  5(8Q24.21) WILD-TYPE" "AMP PEAK  5(8Q24.21) WILD-TYPE" 
                    TCGA-E1-5303                     TCGA-E1-5304 
  "AMP PEAK  5(8Q24.21) MUTATED"   "AMP PEAK  5(8Q24.21) MUTATED" 
                    TCGA-E1-5305                     TCGA-E1-5307 
  "AMP PEAK  5(8Q24.21) MUTATED"   "AMP PEAK  5(8Q24.21) MUTATED" 
                    TCGA-E1-5311                     TCGA-E1-5318 
"AMP PEAK  5(8Q24.21) WILD-TYPE" "AMP PEAK  5(8Q24.21) WILD-TYPE" 
                    TCGA-E1-5319                     TCGA-E1-5322 
"AMP PEAK  5(8Q24.21) WILD-TYPE" "AMP PEAK  5(8Q24.21) WILD-TYPE" 
                    TCGA-EZ-7264                     TCGA-FG-5962 
"AMP PEAK  5(8Q24.21) WILD-TYPE"   "AMP PEAK  5(8Q24.21) MUTATED" 
                    TCGA-FG-5963                     TCGA-FG-5964 
"AMP PEAK  5(8Q24.21) WILD-TYPE"   "AMP PEAK  5(8Q24.21) MUTATED" 
                    TCGA-FG-5965                     TCGA-FG-6688 
"AMP PEAK  5(8Q24.21) WILD-TYPE" "AMP PEAK  5(8Q24.21) WILD-TYPE" 
                    TCGA-FG-6689                     TCGA-FG-6690 
"AMP PEAK  5(8Q24.21) WILD-TYPE" "AMP PEAK  5(8Q24.21) WILD-TYPE" 
                    TCGA-FG-6691                     TCGA-FG-6692 
  "AMP PEAK  5(8Q24.21) MUTATED" "AMP PEAK  5(8Q24.21) WILD-TYPE" 
                    TCGA-FG-7634                     TCGA-FG-7636 
  "AMP PEAK  5(8Q24.21) MUTATED" "AMP PEAK  5(8Q24.21) WILD-TYPE" 
                    TCGA-FG-7638                     TCGA-FG-7643 
"AMP PEAK  5(8Q24.21) WILD-TYPE" "AMP PEAK  5(8Q24.21) WILD-TYPE" 
                    TCGA-FN-7833                     TCGA-HT-7467 
"AMP PEAK  5(8Q24.21) WILD-TYPE" "AMP PEAK  5(8Q24.21) WILD-TYPE" 
                    TCGA-HT-7468                     TCGA-HT-7470 
"AMP PEAK  5(8Q24.21) WILD-TYPE" "AMP PEAK  5(8Q24.21) WILD-TYPE" 
                    TCGA-HT-7472                     TCGA-HT-7473 
"AMP PEAK  5(8Q24.21) WILD-TYPE"   "AMP PEAK  5(8Q24.21) MUTATED" 
                    TCGA-HT-7474                     TCGA-HT-7475 
"AMP PEAK  5(8Q24.21) WILD-TYPE"   "AMP PEAK  5(8Q24.21) MUTATED" 
                    TCGA-HT-7476                     TCGA-HT-7478 
  "AMP PEAK  5(8Q24.21) MUTATED" "AMP PEAK  5(8Q24.21) WILD-TYPE" 
                    TCGA-HT-7479                     TCGA-HT-7480 
  "AMP PEAK  5(8Q24.21) MUTATED" "AMP PEAK  5(8Q24.21) WILD-TYPE" 
                    TCGA-HT-7481                     TCGA-HT-7482 
"AMP PEAK  5(8Q24.21) WILD-TYPE"   "AMP PEAK  5(8Q24.21) MUTATED" 
                    TCGA-HT-7483                     TCGA-HT-7485 
"AMP PEAK  5(8Q24.21) WILD-TYPE" "AMP PEAK  5(8Q24.21) WILD-TYPE" 
                    TCGA-HT-7601                     TCGA-HT-7602 
"AMP PEAK  5(8Q24.21) WILD-TYPE" "AMP PEAK  5(8Q24.21) WILD-TYPE" 
                    TCGA-HT-7603                     TCGA-HT-7604 
"AMP PEAK  5(8Q24.21) WILD-TYPE"   "AMP PEAK  5(8Q24.21) MUTATED" 
                    TCGA-HT-7605                     TCGA-HT-7606 
"AMP PEAK  5(8Q24.21) WILD-TYPE" "AMP PEAK  5(8Q24.21) WILD-TYPE" 
                    TCGA-HT-7607                     TCGA-HT-7608 
"AMP PEAK  5(8Q24.21) WILD-TYPE" "AMP PEAK  5(8Q24.21) WILD-TYPE" 
                    TCGA-HT-7609                     TCGA-HT-7610 
"AMP PEAK  5(8Q24.21) WILD-TYPE" "AMP PEAK  5(8Q24.21) WILD-TYPE" 
                    TCGA-HW-7486                     TCGA-HW-7487 
"AMP PEAK  5(8Q24.21) WILD-TYPE" "AMP PEAK  5(8Q24.21) WILD-TYPE" 
                    TCGA-HW-7489                     TCGA-HW-7490 
"AMP PEAK  5(8Q24.21) WILD-TYPE" "AMP PEAK  5(8Q24.21) WILD-TYPE" 
                    TCGA-HW-7491                     TCGA-HW-7493 
"AMP PEAK  5(8Q24.21) WILD-TYPE" "AMP PEAK  5(8Q24.21) WILD-TYPE" 
                    TCGA-HW-7495                     TCGA-IK-7675 
"AMP PEAK  5(8Q24.21) WILD-TYPE" "AMP PEAK  5(8Q24.21) WILD-TYPE" 
                    TCGA-IK-8125 
"AMP PEAK  5(8Q24.21) WILD-TYPE" 
[1] "hr=" "1.1"
D5V2, continuous
D5V3, binary
[1] "tbl2"
                                cls
clus                             [,1] [,2]
  AMP PEAK  5(8Q24.21) MUTATED      9   22
  AMP PEAK  5(8Q24.21) WILD-TYPE   53   61
        clus
vv       AMP PEAK  5(8Q24.21) MUTATED AMP PEAK  5(8Q24.21) WILD-TYPE
  FEMALE                            9                             53
  MALE                             22                             61
D5V4, continuous
D5V5, multiclass
                   clus
vv                  AMP PEAK  5(8Q24.21) MUTATED AMP PEAK  5(8Q24.21) WILD-TYPE
  ASTROCYTOMA                                 15                             35
  OLIGOASTROCYTOMA                             7                             29
  OLIGODENDROGLIOMA                            9                             49
D5V6, binary
[1] "tbl2"
                                cls
clus                             [,1] [,2]
  AMP PEAK  5(8Q24.21) MUTATED      8   23
  AMP PEAK  5(8Q24.21) WILD-TYPE   51   63
     clus
vv    AMP PEAK  5(8Q24.21) MUTATED AMP PEAK  5(8Q24.21) WILD-TYPE
  NO                            23                             63
  YES                            8                             51
D5V7, binary
[1] "tbl2"
                                cls
clus                             [,1] [,2]
  AMP PEAK  5(8Q24.21) MUTATED     15   16
  AMP PEAK  5(8Q24.21) WILD-TYPE   59   55
     clus
vv    AMP PEAK  5(8Q24.21) MUTATED AMP PEAK  5(8Q24.21) WILD-TYPE
  NO                            16                             55
  YES                           15                             59

Clustering(6) Variable = Amp Peak  6(10p15.3) mutation analysis
D6V1, survival
                    TCGA-CS-4938                     TCGA-CS-4941 
"AMP PEAK  6(10P15.3) WILD-TYPE" "AMP PEAK  6(10P15.3) WILD-TYPE" 
                    TCGA-CS-4942                     TCGA-CS-4943 
"AMP PEAK  6(10P15.3) WILD-TYPE"   "AMP PEAK  6(10P15.3) MUTATED" 
                    TCGA-CS-4944                     TCGA-CS-5390 
"AMP PEAK  6(10P15.3) WILD-TYPE" "AMP PEAK  6(10P15.3) WILD-TYPE" 
                    TCGA-CS-5393                     TCGA-CS-5394 
"AMP PEAK  6(10P15.3) WILD-TYPE" "AMP PEAK  6(10P15.3) WILD-TYPE" 
                    TCGA-CS-5395                     TCGA-CS-5396 
"AMP PEAK  6(10P15.3) WILD-TYPE" "AMP PEAK  6(10P15.3) WILD-TYPE" 
                    TCGA-CS-5397                     TCGA-CS-6186 
"AMP PEAK  6(10P15.3) WILD-TYPE" "AMP PEAK  6(10P15.3) WILD-TYPE" 
                    TCGA-CS-6188                     TCGA-CS-6290 
"AMP PEAK  6(10P15.3) WILD-TYPE" "AMP PEAK  6(10P15.3) WILD-TYPE" 
                    TCGA-CS-6665                     TCGA-CS-6666 
  "AMP PEAK  6(10P15.3) MUTATED"   "AMP PEAK  6(10P15.3) MUTATED" 
                    TCGA-CS-6667                     TCGA-CS-6668 
  "AMP PEAK  6(10P15.3) MUTATED" "AMP PEAK  6(10P15.3) WILD-TYPE" 
                    TCGA-CS-6669                     TCGA-CS-6670 
"AMP PEAK  6(10P15.3) WILD-TYPE" "AMP PEAK  6(10P15.3) WILD-TYPE" 
                    TCGA-DB-5270                     TCGA-DB-5273 
  "AMP PEAK  6(10P15.3) MUTATED" "AMP PEAK  6(10P15.3) WILD-TYPE" 
                    TCGA-DB-5274                     TCGA-DB-5275 
"AMP PEAK  6(10P15.3) WILD-TYPE" "AMP PEAK  6(10P15.3) WILD-TYPE" 
                    TCGA-DB-5276                     TCGA-DB-5277 
"AMP PEAK  6(10P15.3) WILD-TYPE"   "AMP PEAK  6(10P15.3) MUTATED" 
                    TCGA-DB-5278                     TCGA-DB-5279 
"AMP PEAK  6(10P15.3) WILD-TYPE" "AMP PEAK  6(10P15.3) WILD-TYPE" 
                    TCGA-DB-5280                     TCGA-DB-5281 
"AMP PEAK  6(10P15.3) WILD-TYPE" "AMP PEAK  6(10P15.3) WILD-TYPE" 
                    TCGA-DH-5140                     TCGA-DH-5141 
"AMP PEAK  6(10P15.3) WILD-TYPE" "AMP PEAK  6(10P15.3) WILD-TYPE" 
                    TCGA-DH-5142                     TCGA-DH-5143 
"AMP PEAK  6(10P15.3) WILD-TYPE" "AMP PEAK  6(10P15.3) WILD-TYPE" 
                    TCGA-DH-5144                     TCGA-DU-5847 
"AMP PEAK  6(10P15.3) WILD-TYPE" "AMP PEAK  6(10P15.3) WILD-TYPE" 
                    TCGA-DU-5849                     TCGA-DU-5851 
"AMP PEAK  6(10P15.3) WILD-TYPE" "AMP PEAK  6(10P15.3) WILD-TYPE" 
                    TCGA-DU-5852                     TCGA-DU-5853 
"AMP PEAK  6(10P15.3) WILD-TYPE" "AMP PEAK  6(10P15.3) WILD-TYPE" 
                    TCGA-DU-5854                     TCGA-DU-5855 
"AMP PEAK  6(10P15.3) WILD-TYPE" "AMP PEAK  6(10P15.3) WILD-TYPE" 
                    TCGA-DU-5870                     TCGA-DU-5871 
"AMP PEAK  6(10P15.3) WILD-TYPE"   "AMP PEAK  6(10P15.3) MUTATED" 
                    TCGA-DU-5872                     TCGA-DU-5874 
"AMP PEAK  6(10P15.3) WILD-TYPE" "AMP PEAK  6(10P15.3) WILD-TYPE" 
                    TCGA-DU-6392                     TCGA-DU-6393 
"AMP PEAK  6(10P15.3) WILD-TYPE" "AMP PEAK  6(10P15.3) WILD-TYPE" 
                    TCGA-DU-6394                     TCGA-DU-6395 
"AMP PEAK  6(10P15.3) WILD-TYPE" "AMP PEAK  6(10P15.3) WILD-TYPE" 
                    TCGA-DU-6396                     TCGA-DU-6397 
  "AMP PEAK  6(10P15.3) MUTATED" "AMP PEAK  6(10P15.3) WILD-TYPE" 
                    TCGA-DU-6399                     TCGA-DU-6400 
"AMP PEAK  6(10P15.3) WILD-TYPE" "AMP PEAK  6(10P15.3) WILD-TYPE" 
                    TCGA-DU-6401                     TCGA-DU-6402 
"AMP PEAK  6(10P15.3) WILD-TYPE" "AMP PEAK  6(10P15.3) WILD-TYPE" 
                    TCGA-DU-6403                     TCGA-DU-6404 
"AMP PEAK  6(10P15.3) WILD-TYPE" "AMP PEAK  6(10P15.3) WILD-TYPE" 
                    TCGA-DU-6405                     TCGA-DU-6406 
"AMP PEAK  6(10P15.3) WILD-TYPE" "AMP PEAK  6(10P15.3) WILD-TYPE" 
                    TCGA-DU-6407                     TCGA-DU-6408 
"AMP PEAK  6(10P15.3) WILD-TYPE"   "AMP PEAK  6(10P15.3) MUTATED" 
                    TCGA-DU-6410                     TCGA-DU-6542 
"AMP PEAK  6(10P15.3) WILD-TYPE" "AMP PEAK  6(10P15.3) WILD-TYPE" 
                    TCGA-DU-7006                     TCGA-DU-7007 
"AMP PEAK  6(10P15.3) WILD-TYPE" "AMP PEAK  6(10P15.3) WILD-TYPE" 
                    TCGA-DU-7008                     TCGA-DU-7009 
"AMP PEAK  6(10P15.3) WILD-TYPE" "AMP PEAK  6(10P15.3) WILD-TYPE" 
                    TCGA-DU-7010                     TCGA-DU-7011 
"AMP PEAK  6(10P15.3) WILD-TYPE" "AMP PEAK  6(10P15.3) WILD-TYPE" 
                    TCGA-DU-7012                     TCGA-DU-7013 
"AMP PEAK  6(10P15.3) WILD-TYPE" "AMP PEAK  6(10P15.3) WILD-TYPE" 
                    TCGA-DU-7014                     TCGA-DU-7015 
  "AMP PEAK  6(10P15.3) MUTATED" "AMP PEAK  6(10P15.3) WILD-TYPE" 
                    TCGA-DU-7018                     TCGA-DU-7019 
"AMP PEAK  6(10P15.3) WILD-TYPE"   "AMP PEAK  6(10P15.3) MUTATED" 
                    TCGA-DU-7290                     TCGA-DU-7292 
"AMP PEAK  6(10P15.3) WILD-TYPE" "AMP PEAK  6(10P15.3) WILD-TYPE" 
                    TCGA-DU-7294                     TCGA-DU-7298 
"AMP PEAK  6(10P15.3) WILD-TYPE" "AMP PEAK  6(10P15.3) WILD-TYPE" 
                    TCGA-DU-7299                     TCGA-DU-7300 
  "AMP PEAK  6(10P15.3) MUTATED" "AMP PEAK  6(10P15.3) WILD-TYPE" 
                    TCGA-DU-7301                     TCGA-DU-7302 
"AMP PEAK  6(10P15.3) WILD-TYPE" "AMP PEAK  6(10P15.3) WILD-TYPE" 
                    TCGA-DU-7304                     TCGA-DU-7306 
  "AMP PEAK  6(10P15.3) MUTATED" "AMP PEAK  6(10P15.3) WILD-TYPE" 
                    TCGA-DU-7309                     TCGA-E1-5302 
"AMP PEAK  6(10P15.3) WILD-TYPE" "AMP PEAK  6(10P15.3) WILD-TYPE" 
                    TCGA-E1-5303                     TCGA-E1-5304 
  "AMP PEAK  6(10P15.3) MUTATED"   "AMP PEAK  6(10P15.3) MUTATED" 
                    TCGA-E1-5305                     TCGA-E1-5307 
"AMP PEAK  6(10P15.3) WILD-TYPE" "AMP PEAK  6(10P15.3) WILD-TYPE" 
                    TCGA-E1-5311                     TCGA-E1-5318 
"AMP PEAK  6(10P15.3) WILD-TYPE" "AMP PEAK  6(10P15.3) WILD-TYPE" 
                    TCGA-E1-5319                     TCGA-E1-5322 
"AMP PEAK  6(10P15.3) WILD-TYPE"   "AMP PEAK  6(10P15.3) MUTATED" 
                    TCGA-EZ-7264                     TCGA-FG-5962 
"AMP PEAK  6(10P15.3) WILD-TYPE" "AMP PEAK  6(10P15.3) WILD-TYPE" 
                    TCGA-FG-5963                     TCGA-FG-5964 
"AMP PEAK  6(10P15.3) WILD-TYPE" "AMP PEAK  6(10P15.3) WILD-TYPE" 
                    TCGA-FG-5965                     TCGA-FG-6688 
"AMP PEAK  6(10P15.3) WILD-TYPE" "AMP PEAK  6(10P15.3) WILD-TYPE" 
                    TCGA-FG-6689                     TCGA-FG-6690 
"AMP PEAK  6(10P15.3) WILD-TYPE" "AMP PEAK  6(10P15.3) WILD-TYPE" 
                    TCGA-FG-6691                     TCGA-FG-6692 
  "AMP PEAK  6(10P15.3) MUTATED" "AMP PEAK  6(10P15.3) WILD-TYPE" 
                    TCGA-FG-7634                     TCGA-FG-7636 
"AMP PEAK  6(10P15.3) WILD-TYPE" "AMP PEAK  6(10P15.3) WILD-TYPE" 
                    TCGA-FG-7638                     TCGA-FG-7643 
"AMP PEAK  6(10P15.3) WILD-TYPE" "AMP PEAK  6(10P15.3) WILD-TYPE" 
                    TCGA-FN-7833                     TCGA-HT-7467 
"AMP PEAK  6(10P15.3) WILD-TYPE" "AMP PEAK  6(10P15.3) WILD-TYPE" 
                    TCGA-HT-7468                     TCGA-HT-7470 
"AMP PEAK  6(10P15.3) WILD-TYPE"   "AMP PEAK  6(10P15.3) MUTATED" 
                    TCGA-HT-7472                     TCGA-HT-7473 
"AMP PEAK  6(10P15.3) WILD-TYPE"   "AMP PEAK  6(10P15.3) MUTATED" 
                    TCGA-HT-7474                     TCGA-HT-7475 
"AMP PEAK  6(10P15.3) WILD-TYPE" "AMP PEAK  6(10P15.3) WILD-TYPE" 
                    TCGA-HT-7476                     TCGA-HT-7478 
  "AMP PEAK  6(10P15.3) MUTATED" "AMP PEAK  6(10P15.3) WILD-TYPE" 
                    TCGA-HT-7479                     TCGA-HT-7480 
  "AMP PEAK  6(10P15.3) MUTATED" "AMP PEAK  6(10P15.3) WILD-TYPE" 
                    TCGA-HT-7481                     TCGA-HT-7482 
"AMP PEAK  6(10P15.3) WILD-TYPE"   "AMP PEAK  6(10P15.3) MUTATED" 
                    TCGA-HT-7483                     TCGA-HT-7485 
  "AMP PEAK  6(10P15.3) MUTATED" "AMP PEAK  6(10P15.3) WILD-TYPE" 
                    TCGA-HT-7601                     TCGA-HT-7602 
"AMP PEAK  6(10P15.3) WILD-TYPE" "AMP PEAK  6(10P15.3) WILD-TYPE" 
                    TCGA-HT-7603                     TCGA-HT-7604 
"AMP PEAK  6(10P15.3) WILD-TYPE" "AMP PEAK  6(10P15.3) WILD-TYPE" 
                    TCGA-HT-7605                     TCGA-HT-7606 
"AMP PEAK  6(10P15.3) WILD-TYPE" "AMP PEAK  6(10P15.3) WILD-TYPE" 
                    TCGA-HT-7607                     TCGA-HT-7608 
"AMP PEAK  6(10P15.3) WILD-TYPE" "AMP PEAK  6(10P15.3) WILD-TYPE" 
                    TCGA-HT-7609                     TCGA-HT-7610 
"AMP PEAK  6(10P15.3) WILD-TYPE" "AMP PEAK  6(10P15.3) WILD-TYPE" 
                    TCGA-HW-7486                     TCGA-HW-7487 
"AMP PEAK  6(10P15.3) WILD-TYPE" "AMP PEAK  6(10P15.3) WILD-TYPE" 
                    TCGA-HW-7489                     TCGA-HW-7490 
  "AMP PEAK  6(10P15.3) MUTATED" "AMP PEAK  6(10P15.3) WILD-TYPE" 
                    TCGA-HW-7491                     TCGA-HW-7493 
"AMP PEAK  6(10P15.3) WILD-TYPE"   "AMP PEAK  6(10P15.3) MUTATED" 
                    TCGA-HW-7495                     TCGA-IK-7675 
"AMP PEAK  6(10P15.3) WILD-TYPE"   "AMP PEAK  6(10P15.3) MUTATED" 
                    TCGA-IK-8125 
"AMP PEAK  6(10P15.3) WILD-TYPE" 
                    TCGA-CS-4938                     TCGA-CS-4941 
"AMP PEAK  6(10P15.3) WILD-TYPE" "AMP PEAK  6(10P15.3) WILD-TYPE" 
                    TCGA-CS-4942                     TCGA-CS-4943 
"AMP PEAK  6(10P15.3) WILD-TYPE"   "AMP PEAK  6(10P15.3) MUTATED" 
                    TCGA-CS-4944                     TCGA-CS-5390 
"AMP PEAK  6(10P15.3) WILD-TYPE" "AMP PEAK  6(10P15.3) WILD-TYPE" 
                    TCGA-CS-5393                     TCGA-CS-5394 
"AMP PEAK  6(10P15.3) WILD-TYPE" "AMP PEAK  6(10P15.3) WILD-TYPE" 
                    TCGA-CS-5395                     TCGA-CS-5396 
"AMP PEAK  6(10P15.3) WILD-TYPE" "AMP PEAK  6(10P15.3) WILD-TYPE" 
                    TCGA-CS-5397                     TCGA-CS-6186 
"AMP PEAK  6(10P15.3) WILD-TYPE" "AMP PEAK  6(10P15.3) WILD-TYPE" 
                    TCGA-CS-6188                     TCGA-CS-6290 
"AMP PEAK  6(10P15.3) WILD-TYPE" "AMP PEAK  6(10P15.3) WILD-TYPE" 
                    TCGA-CS-6665                     TCGA-CS-6666 
  "AMP PEAK  6(10P15.3) MUTATED"   "AMP PEAK  6(10P15.3) MUTATED" 
                    TCGA-CS-6667                     TCGA-CS-6668 
  "AMP PEAK  6(10P15.3) MUTATED" "AMP PEAK  6(10P15.3) WILD-TYPE" 
                    TCGA-CS-6669                     TCGA-CS-6670 
"AMP PEAK  6(10P15.3) WILD-TYPE" "AMP PEAK  6(10P15.3) WILD-TYPE" 
                    TCGA-DB-5270                     TCGA-DB-5273 
  "AMP PEAK  6(10P15.3) MUTATED" "AMP PEAK  6(10P15.3) WILD-TYPE" 
                    TCGA-DB-5274                     TCGA-DB-5275 
"AMP PEAK  6(10P15.3) WILD-TYPE" "AMP PEAK  6(10P15.3) WILD-TYPE" 
                    TCGA-DB-5276                     TCGA-DB-5277 
"AMP PEAK  6(10P15.3) WILD-TYPE"   "AMP PEAK  6(10P15.3) MUTATED" 
                    TCGA-DB-5278                     TCGA-DB-5279 
"AMP PEAK  6(10P15.3) WILD-TYPE" "AMP PEAK  6(10P15.3) WILD-TYPE" 
                    TCGA-DB-5280                     TCGA-DB-5281 
"AMP PEAK  6(10P15.3) WILD-TYPE" "AMP PEAK  6(10P15.3) WILD-TYPE" 
                    TCGA-DH-5140                     TCGA-DH-5141 
"AMP PEAK  6(10P15.3) WILD-TYPE" "AMP PEAK  6(10P15.3) WILD-TYPE" 
                    TCGA-DH-5142                     TCGA-DH-5143 
"AMP PEAK  6(10P15.3) WILD-TYPE" "AMP PEAK  6(10P15.3) WILD-TYPE" 
                    TCGA-DH-5144                     TCGA-DU-5847 
"AMP PEAK  6(10P15.3) WILD-TYPE" "AMP PEAK  6(10P15.3) WILD-TYPE" 
                    TCGA-DU-5849                     TCGA-DU-5851 
"AMP PEAK  6(10P15.3) WILD-TYPE" "AMP PEAK  6(10P15.3) WILD-TYPE" 
                    TCGA-DU-5852                     TCGA-DU-5853 
"AMP PEAK  6(10P15.3) WILD-TYPE" "AMP PEAK  6(10P15.3) WILD-TYPE" 
                    TCGA-DU-5854                     TCGA-DU-5855 
"AMP PEAK  6(10P15.3) WILD-TYPE" "AMP PEAK  6(10P15.3) WILD-TYPE" 
                    TCGA-DU-5870                     TCGA-DU-5871 
"AMP PEAK  6(10P15.3) WILD-TYPE"   "AMP PEAK  6(10P15.3) MUTATED" 
                    TCGA-DU-5872                     TCGA-DU-5874 
"AMP PEAK  6(10P15.3) WILD-TYPE" "AMP PEAK  6(10P15.3) WILD-TYPE" 
                    TCGA-DU-6392                     TCGA-DU-6393 
"AMP PEAK  6(10P15.3) WILD-TYPE" "AMP PEAK  6(10P15.3) WILD-TYPE" 
                    TCGA-DU-6394                     TCGA-DU-6395 
"AMP PEAK  6(10P15.3) WILD-TYPE" "AMP PEAK  6(10P15.3) WILD-TYPE" 
                    TCGA-DU-6396                     TCGA-DU-6397 
  "AMP PEAK  6(10P15.3) MUTATED" "AMP PEAK  6(10P15.3) WILD-TYPE" 
                    TCGA-DU-6399                     TCGA-DU-6400 
"AMP PEAK  6(10P15.3) WILD-TYPE" "AMP PEAK  6(10P15.3) WILD-TYPE" 
                    TCGA-DU-6401                     TCGA-DU-6402 
"AMP PEAK  6(10P15.3) WILD-TYPE" "AMP PEAK  6(10P15.3) WILD-TYPE" 
                    TCGA-DU-6403                     TCGA-DU-6404 
"AMP PEAK  6(10P15.3) WILD-TYPE" "AMP PEAK  6(10P15.3) WILD-TYPE" 
                    TCGA-DU-6405                     TCGA-DU-6406 
"AMP PEAK  6(10P15.3) WILD-TYPE" "AMP PEAK  6(10P15.3) WILD-TYPE" 
                    TCGA-DU-6407                     TCGA-DU-6408 
"AMP PEAK  6(10P15.3) WILD-TYPE"   "AMP PEAK  6(10P15.3) MUTATED" 
                    TCGA-DU-6410                     TCGA-DU-6542 
"AMP PEAK  6(10P15.3) WILD-TYPE" "AMP PEAK  6(10P15.3) WILD-TYPE" 
                    TCGA-DU-7006                     TCGA-DU-7007 
"AMP PEAK  6(10P15.3) WILD-TYPE" "AMP PEAK  6(10P15.3) WILD-TYPE" 
                    TCGA-DU-7008                     TCGA-DU-7009 
"AMP PEAK  6(10P15.3) WILD-TYPE" "AMP PEAK  6(10P15.3) WILD-TYPE" 
                    TCGA-DU-7010                     TCGA-DU-7011 
"AMP PEAK  6(10P15.3) WILD-TYPE" "AMP PEAK  6(10P15.3) WILD-TYPE" 
                    TCGA-DU-7012                     TCGA-DU-7013 
"AMP PEAK  6(10P15.3) WILD-TYPE" "AMP PEAK  6(10P15.3) WILD-TYPE" 
                    TCGA-DU-7014                     TCGA-DU-7015 
  "AMP PEAK  6(10P15.3) MUTATED" "AMP PEAK  6(10P15.3) WILD-TYPE" 
                    TCGA-DU-7018                     TCGA-DU-7019 
"AMP PEAK  6(10P15.3) WILD-TYPE"   "AMP PEAK  6(10P15.3) MUTATED" 
                    TCGA-DU-7290                     TCGA-DU-7292 
"AMP PEAK  6(10P15.3) WILD-TYPE" "AMP PEAK  6(10P15.3) WILD-TYPE" 
                    TCGA-DU-7294                     TCGA-DU-7298 
"AMP PEAK  6(10P15.3) WILD-TYPE" "AMP PEAK  6(10P15.3) WILD-TYPE" 
                    TCGA-DU-7299                     TCGA-DU-7300 
  "AMP PEAK  6(10P15.3) MUTATED" "AMP PEAK  6(10P15.3) WILD-TYPE" 
                    TCGA-DU-7301                     TCGA-DU-7302 
"AMP PEAK  6(10P15.3) WILD-TYPE" "AMP PEAK  6(10P15.3) WILD-TYPE" 
                    TCGA-DU-7304                     TCGA-DU-7306 
  "AMP PEAK  6(10P15.3) MUTATED" "AMP PEAK  6(10P15.3) WILD-TYPE" 
                    TCGA-DU-7309                     TCGA-E1-5302 
"AMP PEAK  6(10P15.3) WILD-TYPE" "AMP PEAK  6(10P15.3) WILD-TYPE" 
                    TCGA-E1-5303                     TCGA-E1-5304 
  "AMP PEAK  6(10P15.3) MUTATED"   "AMP PEAK  6(10P15.3) MUTATED" 
                    TCGA-E1-5305                     TCGA-E1-5307 
"AMP PEAK  6(10P15.3) WILD-TYPE" "AMP PEAK  6(10P15.3) WILD-TYPE" 
                    TCGA-E1-5311                     TCGA-E1-5318 
"AMP PEAK  6(10P15.3) WILD-TYPE" "AMP PEAK  6(10P15.3) WILD-TYPE" 
                    TCGA-E1-5319                     TCGA-E1-5322 
"AMP PEAK  6(10P15.3) WILD-TYPE"   "AMP PEAK  6(10P15.3) MUTATED" 
                    TCGA-EZ-7264                     TCGA-FG-5962 
"AMP PEAK  6(10P15.3) WILD-TYPE" "AMP PEAK  6(10P15.3) WILD-TYPE" 
                    TCGA-FG-5963                     TCGA-FG-5964 
"AMP PEAK  6(10P15.3) WILD-TYPE" "AMP PEAK  6(10P15.3) WILD-TYPE" 
                    TCGA-FG-5965                     TCGA-FG-6688 
"AMP PEAK  6(10P15.3) WILD-TYPE" "AMP PEAK  6(10P15.3) WILD-TYPE" 
                    TCGA-FG-6689                     TCGA-FG-6690 
"AMP PEAK  6(10P15.3) WILD-TYPE" "AMP PEAK  6(10P15.3) WILD-TYPE" 
                    TCGA-FG-6691                     TCGA-FG-6692 
  "AMP PEAK  6(10P15.3) MUTATED" "AMP PEAK  6(10P15.3) WILD-TYPE" 
                    TCGA-FG-7634                     TCGA-FG-7636 
"AMP PEAK  6(10P15.3) WILD-TYPE" "AMP PEAK  6(10P15.3) WILD-TYPE" 
                    TCGA-FG-7638                     TCGA-FG-7643 
"AMP PEAK  6(10P15.3) WILD-TYPE" "AMP PEAK  6(10P15.3) WILD-TYPE" 
                    TCGA-FN-7833                     TCGA-HT-7467 
"AMP PEAK  6(10P15.3) WILD-TYPE" "AMP PEAK  6(10P15.3) WILD-TYPE" 
                    TCGA-HT-7468                     TCGA-HT-7470 
"AMP PEAK  6(10P15.3) WILD-TYPE"   "AMP PEAK  6(10P15.3) MUTATED" 
                    TCGA-HT-7472                     TCGA-HT-7473 
"AMP PEAK  6(10P15.3) WILD-TYPE"   "AMP PEAK  6(10P15.3) MUTATED" 
                    TCGA-HT-7474                     TCGA-HT-7475 
"AMP PEAK  6(10P15.3) WILD-TYPE" "AMP PEAK  6(10P15.3) WILD-TYPE" 
                    TCGA-HT-7476                     TCGA-HT-7478 
  "AMP PEAK  6(10P15.3) MUTATED" "AMP PEAK  6(10P15.3) WILD-TYPE" 
                    TCGA-HT-7479                     TCGA-HT-7480 
  "AMP PEAK  6(10P15.3) MUTATED" "AMP PEAK  6(10P15.3) WILD-TYPE" 
                    TCGA-HT-7481                     TCGA-HT-7482 
"AMP PEAK  6(10P15.3) WILD-TYPE"   "AMP PEAK  6(10P15.3) MUTATED" 
                    TCGA-HT-7483                     TCGA-HT-7485 
  "AMP PEAK  6(10P15.3) MUTATED" "AMP PEAK  6(10P15.3) WILD-TYPE" 
                    TCGA-HT-7601                     TCGA-HT-7602 
"AMP PEAK  6(10P15.3) WILD-TYPE" "AMP PEAK  6(10P15.3) WILD-TYPE" 
                    TCGA-HT-7603                     TCGA-HT-7604 
"AMP PEAK  6(10P15.3) WILD-TYPE" "AMP PEAK  6(10P15.3) WILD-TYPE" 
                    TCGA-HT-7605                     TCGA-HT-7606 
"AMP PEAK  6(10P15.3) WILD-TYPE" "AMP PEAK  6(10P15.3) WILD-TYPE" 
                    TCGA-HT-7607                     TCGA-HT-7608 
"AMP PEAK  6(10P15.3) WILD-TYPE" "AMP PEAK  6(10P15.3) WILD-TYPE" 
                    TCGA-HT-7609                     TCGA-HT-7610 
"AMP PEAK  6(10P15.3) WILD-TYPE" "AMP PEAK  6(10P15.3) WILD-TYPE" 
                    TCGA-HW-7486                     TCGA-HW-7487 
"AMP PEAK  6(10P15.3) WILD-TYPE" "AMP PEAK  6(10P15.3) WILD-TYPE" 
                    TCGA-HW-7489                     TCGA-HW-7490 
  "AMP PEAK  6(10P15.3) MUTATED" "AMP PEAK  6(10P15.3) WILD-TYPE" 
                    TCGA-HW-7491                     TCGA-HW-7493 
"AMP PEAK  6(10P15.3) WILD-TYPE"   "AMP PEAK  6(10P15.3) MUTATED" 
                    TCGA-HW-7495                     TCGA-IK-7675 
"AMP PEAK  6(10P15.3) WILD-TYPE"   "AMP PEAK  6(10P15.3) MUTATED" 
                    TCGA-IK-8125 
"AMP PEAK  6(10P15.3) WILD-TYPE" 
                    TCGA-CS-4938                     TCGA-CS-4941 
"AMP PEAK  6(10P15.3) WILD-TYPE" "AMP PEAK  6(10P15.3) WILD-TYPE" 
                    TCGA-CS-4942                     TCGA-CS-4943 
"AMP PEAK  6(10P15.3) WILD-TYPE"   "AMP PEAK  6(10P15.3) MUTATED" 
                    TCGA-CS-4944                     TCGA-CS-5390 
"AMP PEAK  6(10P15.3) WILD-TYPE" "AMP PEAK  6(10P15.3) WILD-TYPE" 
                    TCGA-CS-5393                     TCGA-CS-5394 
"AMP PEAK  6(10P15.3) WILD-TYPE" "AMP PEAK  6(10P15.3) WILD-TYPE" 
                    TCGA-CS-5395                     TCGA-CS-5396 
"AMP PEAK  6(10P15.3) WILD-TYPE" "AMP PEAK  6(10P15.3) WILD-TYPE" 
                    TCGA-CS-5397                     TCGA-CS-6186 
"AMP PEAK  6(10P15.3) WILD-TYPE" "AMP PEAK  6(10P15.3) WILD-TYPE" 
                    TCGA-CS-6188                     TCGA-CS-6290 
"AMP PEAK  6(10P15.3) WILD-TYPE" "AMP PEAK  6(10P15.3) WILD-TYPE" 
                    TCGA-CS-6665                     TCGA-CS-6666 
  "AMP PEAK  6(10P15.3) MUTATED"   "AMP PEAK  6(10P15.3) MUTATED" 
                    TCGA-CS-6667                     TCGA-CS-6668 
  "AMP PEAK  6(10P15.3) MUTATED" "AMP PEAK  6(10P15.3) WILD-TYPE" 
                    TCGA-CS-6669                     TCGA-CS-6670 
"AMP PEAK  6(10P15.3) WILD-TYPE" "AMP PEAK  6(10P15.3) WILD-TYPE" 
                    TCGA-DB-5270                     TCGA-DB-5273 
  "AMP PEAK  6(10P15.3) MUTATED" "AMP PEAK  6(10P15.3) WILD-TYPE" 
                    TCGA-DB-5274                     TCGA-DB-5275 
"AMP PEAK  6(10P15.3) WILD-TYPE" "AMP PEAK  6(10P15.3) WILD-TYPE" 
                    TCGA-DB-5276                     TCGA-DB-5277 
"AMP PEAK  6(10P15.3) WILD-TYPE"   "AMP PEAK  6(10P15.3) MUTATED" 
                    TCGA-DB-5278                     TCGA-DB-5279 
"AMP PEAK  6(10P15.3) WILD-TYPE" "AMP PEAK  6(10P15.3) WILD-TYPE" 
                    TCGA-DB-5280                     TCGA-DB-5281 
"AMP PEAK  6(10P15.3) WILD-TYPE" "AMP PEAK  6(10P15.3) WILD-TYPE" 
                    TCGA-DH-5140                     TCGA-DH-5141 
"AMP PEAK  6(10P15.3) WILD-TYPE" "AMP PEAK  6(10P15.3) WILD-TYPE" 
                    TCGA-DH-5142                     TCGA-DH-5143 
"AMP PEAK  6(10P15.3) WILD-TYPE" "AMP PEAK  6(10P15.3) WILD-TYPE" 
                    TCGA-DH-5144                     TCGA-DU-5847 
"AMP PEAK  6(10P15.3) WILD-TYPE" "AMP PEAK  6(10P15.3) WILD-TYPE" 
                    TCGA-DU-5849                     TCGA-DU-5851 
"AMP PEAK  6(10P15.3) WILD-TYPE" "AMP PEAK  6(10P15.3) WILD-TYPE" 
                    TCGA-DU-5852                     TCGA-DU-5853 
"AMP PEAK  6(10P15.3) WILD-TYPE" "AMP PEAK  6(10P15.3) WILD-TYPE" 
                    TCGA-DU-5854                     TCGA-DU-5855 
"AMP PEAK  6(10P15.3) WILD-TYPE" "AMP PEAK  6(10P15.3) WILD-TYPE" 
                    TCGA-DU-5870                     TCGA-DU-5871 
"AMP PEAK  6(10P15.3) WILD-TYPE"   "AMP PEAK  6(10P15.3) MUTATED" 
                    TCGA-DU-5872                     TCGA-DU-5874 
"AMP PEAK  6(10P15.3) WILD-TYPE" "AMP PEAK  6(10P15.3) WILD-TYPE" 
                    TCGA-DU-6392                     TCGA-DU-6393 
"AMP PEAK  6(10P15.3) WILD-TYPE" "AMP PEAK  6(10P15.3) WILD-TYPE" 
                    TCGA-DU-6394                     TCGA-DU-6395 
"AMP PEAK  6(10P15.3) WILD-TYPE" "AMP PEAK  6(10P15.3) WILD-TYPE" 
                    TCGA-DU-6396                     TCGA-DU-6397 
  "AMP PEAK  6(10P15.3) MUTATED" "AMP PEAK  6(10P15.3) WILD-TYPE" 
                    TCGA-DU-6399                     TCGA-DU-6400 
"AMP PEAK  6(10P15.3) WILD-TYPE" "AMP PEAK  6(10P15.3) WILD-TYPE" 
                    TCGA-DU-6401                     TCGA-DU-6402 
"AMP PEAK  6(10P15.3) WILD-TYPE" "AMP PEAK  6(10P15.3) WILD-TYPE" 
                    TCGA-DU-6403                     TCGA-DU-6404 
"AMP PEAK  6(10P15.3) WILD-TYPE" "AMP PEAK  6(10P15.3) WILD-TYPE" 
                    TCGA-DU-6405                     TCGA-DU-6406 
"AMP PEAK  6(10P15.3) WILD-TYPE" "AMP PEAK  6(10P15.3) WILD-TYPE" 
                    TCGA-DU-6407                     TCGA-DU-6408 
"AMP PEAK  6(10P15.3) WILD-TYPE"   "AMP PEAK  6(10P15.3) MUTATED" 
                    TCGA-DU-6410                     TCGA-DU-6542 
"AMP PEAK  6(10P15.3) WILD-TYPE" "AMP PEAK  6(10P15.3) WILD-TYPE" 
                    TCGA-DU-7006                     TCGA-DU-7007 
"AMP PEAK  6(10P15.3) WILD-TYPE" "AMP PEAK  6(10P15.3) WILD-TYPE" 
                    TCGA-DU-7008                     TCGA-DU-7009 
"AMP PEAK  6(10P15.3) WILD-TYPE" "AMP PEAK  6(10P15.3) WILD-TYPE" 
                    TCGA-DU-7010                     TCGA-DU-7011 
"AMP PEAK  6(10P15.3) WILD-TYPE" "AMP PEAK  6(10P15.3) WILD-TYPE" 
                    TCGA-DU-7012                     TCGA-DU-7013 
"AMP PEAK  6(10P15.3) WILD-TYPE" "AMP PEAK  6(10P15.3) WILD-TYPE" 
                    TCGA-DU-7014                     TCGA-DU-7015 
  "AMP PEAK  6(10P15.3) MUTATED" "AMP PEAK  6(10P15.3) WILD-TYPE" 
                    TCGA-DU-7018                     TCGA-DU-7019 
"AMP PEAK  6(10P15.3) WILD-TYPE"   "AMP PEAK  6(10P15.3) MUTATED" 
                    TCGA-DU-7290                     TCGA-DU-7292 
"AMP PEAK  6(10P15.3) WILD-TYPE" "AMP PEAK  6(10P15.3) WILD-TYPE" 
                    TCGA-DU-7294                     TCGA-DU-7298 
"AMP PEAK  6(10P15.3) WILD-TYPE" "AMP PEAK  6(10P15.3) WILD-TYPE" 
                    TCGA-DU-7299                     TCGA-DU-7300 
  "AMP PEAK  6(10P15.3) MUTATED" "AMP PEAK  6(10P15.3) WILD-TYPE" 
                    TCGA-DU-7301                     TCGA-DU-7302 
"AMP PEAK  6(10P15.3) WILD-TYPE" "AMP PEAK  6(10P15.3) WILD-TYPE" 
                    TCGA-DU-7304                     TCGA-DU-7306 
  "AMP PEAK  6(10P15.3) MUTATED" "AMP PEAK  6(10P15.3) WILD-TYPE" 
                    TCGA-DU-7309                     TCGA-E1-5302 
"AMP PEAK  6(10P15.3) WILD-TYPE" "AMP PEAK  6(10P15.3) WILD-TYPE" 
                    TCGA-E1-5303                     TCGA-E1-5304 
  "AMP PEAK  6(10P15.3) MUTATED"   "AMP PEAK  6(10P15.3) MUTATED" 
                    TCGA-E1-5305                     TCGA-E1-5307 
"AMP PEAK  6(10P15.3) WILD-TYPE" "AMP PEAK  6(10P15.3) WILD-TYPE" 
                    TCGA-E1-5311                     TCGA-E1-5318 
"AMP PEAK  6(10P15.3) WILD-TYPE" "AMP PEAK  6(10P15.3) WILD-TYPE" 
                    TCGA-E1-5319                     TCGA-E1-5322 
"AMP PEAK  6(10P15.3) WILD-TYPE"   "AMP PEAK  6(10P15.3) MUTATED" 
                    TCGA-EZ-7264                     TCGA-FG-5962 
"AMP PEAK  6(10P15.3) WILD-TYPE" "AMP PEAK  6(10P15.3) WILD-TYPE" 
                    TCGA-FG-5963                     TCGA-FG-5964 
"AMP PEAK  6(10P15.3) WILD-TYPE" "AMP PEAK  6(10P15.3) WILD-TYPE" 
                    TCGA-FG-5965                     TCGA-FG-6688 
"AMP PEAK  6(10P15.3) WILD-TYPE" "AMP PEAK  6(10P15.3) WILD-TYPE" 
                    TCGA-FG-6689                     TCGA-FG-6690 
"AMP PEAK  6(10P15.3) WILD-TYPE" "AMP PEAK  6(10P15.3) WILD-TYPE" 
                    TCGA-FG-6691                     TCGA-FG-6692 
  "AMP PEAK  6(10P15.3) MUTATED" "AMP PEAK  6(10P15.3) WILD-TYPE" 
                    TCGA-FG-7634                     TCGA-FG-7636 
"AMP PEAK  6(10P15.3) WILD-TYPE" "AMP PEAK  6(10P15.3) WILD-TYPE" 
                    TCGA-FG-7638                     TCGA-FG-7643 
"AMP PEAK  6(10P15.3) WILD-TYPE" "AMP PEAK  6(10P15.3) WILD-TYPE" 
                    TCGA-FN-7833                     TCGA-HT-7467 
"AMP PEAK  6(10P15.3) WILD-TYPE" "AMP PEAK  6(10P15.3) WILD-TYPE" 
                    TCGA-HT-7468                     TCGA-HT-7470 
"AMP PEAK  6(10P15.3) WILD-TYPE"   "AMP PEAK  6(10P15.3) MUTATED" 
                    TCGA-HT-7472                     TCGA-HT-7473 
"AMP PEAK  6(10P15.3) WILD-TYPE"   "AMP PEAK  6(10P15.3) MUTATED" 
                    TCGA-HT-7474                     TCGA-HT-7475 
"AMP PEAK  6(10P15.3) WILD-TYPE" "AMP PEAK  6(10P15.3) WILD-TYPE" 
                    TCGA-HT-7476                     TCGA-HT-7478 
  "AMP PEAK  6(10P15.3) MUTATED" "AMP PEAK  6(10P15.3) WILD-TYPE" 
                    TCGA-HT-7479                     TCGA-HT-7480 
  "AMP PEAK  6(10P15.3) MUTATED" "AMP PEAK  6(10P15.3) WILD-TYPE" 
                    TCGA-HT-7481                     TCGA-HT-7482 
"AMP PEAK  6(10P15.3) WILD-TYPE"   "AMP PEAK  6(10P15.3) MUTATED" 
                    TCGA-HT-7483                     TCGA-HT-7485 
  "AMP PEAK  6(10P15.3) MUTATED" "AMP PEAK  6(10P15.3) WILD-TYPE" 
                    TCGA-HT-7601                     TCGA-HT-7602 
"AMP PEAK  6(10P15.3) WILD-TYPE" "AMP PEAK  6(10P15.3) WILD-TYPE" 
                    TCGA-HT-7603                     TCGA-HT-7604 
"AMP PEAK  6(10P15.3) WILD-TYPE" "AMP PEAK  6(10P15.3) WILD-TYPE" 
                    TCGA-HT-7605                     TCGA-HT-7606 
"AMP PEAK  6(10P15.3) WILD-TYPE" "AMP PEAK  6(10P15.3) WILD-TYPE" 
                    TCGA-HT-7607                     TCGA-HT-7608 
"AMP PEAK  6(10P15.3) WILD-TYPE" "AMP PEAK  6(10P15.3) WILD-TYPE" 
                    TCGA-HT-7609                     TCGA-HT-7610 
"AMP PEAK  6(10P15.3) WILD-TYPE" "AMP PEAK  6(10P15.3) WILD-TYPE" 
                    TCGA-HW-7486                     TCGA-HW-7487 
"AMP PEAK  6(10P15.3) WILD-TYPE" "AMP PEAK  6(10P15.3) WILD-TYPE" 
                    TCGA-HW-7489                     TCGA-HW-7490 
  "AMP PEAK  6(10P15.3) MUTATED" "AMP PEAK  6(10P15.3) WILD-TYPE" 
                    TCGA-HW-7491                     TCGA-HW-7493 
"AMP PEAK  6(10P15.3) WILD-TYPE"   "AMP PEAK  6(10P15.3) MUTATED" 
                    TCGA-HW-7495                     TCGA-IK-7675 
"AMP PEAK  6(10P15.3) WILD-TYPE"   "AMP PEAK  6(10P15.3) MUTATED" 
                    TCGA-IK-8125 
"AMP PEAK  6(10P15.3) WILD-TYPE" 
[1] "hr=" "1.3"
D6V2, continuous
D6V3, binary
[1] "tbl2"
                                cls
clus                             [,1] [,2]
  AMP PEAK  6(10P15.3) MUTATED     10   16
  AMP PEAK  6(10P15.3) WILD-TYPE   52   67
        clus
vv       AMP PEAK  6(10P15.3) MUTATED AMP PEAK  6(10P15.3) WILD-TYPE
  FEMALE                           10                             52
  MALE                             16                             67
D6V4, continuous
D6V5, multiclass
                   clus
vv                  AMP PEAK  6(10P15.3) MUTATED AMP PEAK  6(10P15.3) WILD-TYPE
  ASTROCYTOMA                                 12                             38
  OLIGOASTROCYTOMA                             9                             27
  OLIGODENDROGLIOMA                            5                             53
D6V6, binary
[1] "tbl2"
                                cls
clus                             [,1] [,2]
  AMP PEAK  6(10P15.3) MUTATED     10   16
  AMP PEAK  6(10P15.3) WILD-TYPE   49   70
     clus
vv    AMP PEAK  6(10P15.3) MUTATED AMP PEAK  6(10P15.3) WILD-TYPE
  NO                            16                             70
  YES                           10                             49
D6V7, binary
[1] "tbl2"
                                cls
clus                             [,1] [,2]
  AMP PEAK  6(10P15.3) MUTATED     15   11
  AMP PEAK  6(10P15.3) WILD-TYPE   59   60
     clus
vv    AMP PEAK  6(10P15.3) MUTATED AMP PEAK  6(10P15.3) WILD-TYPE
  NO                            11                             60
  YES                           15                             59

Clustering(7) Variable = Amp Peak  7(11q23.3) mutation analysis
D7V1, survival
                    TCGA-CS-4938                     TCGA-CS-4941 
"AMP PEAK  7(11Q23.3) WILD-TYPE" "AMP PEAK  7(11Q23.3) WILD-TYPE" 
                    TCGA-CS-4942                     TCGA-CS-4943 
"AMP PEAK  7(11Q23.3) WILD-TYPE" "AMP PEAK  7(11Q23.3) WILD-TYPE" 
                    TCGA-CS-4944                     TCGA-CS-5390 
"AMP PEAK  7(11Q23.3) WILD-TYPE" "AMP PEAK  7(11Q23.3) WILD-TYPE" 
                    TCGA-CS-5393                     TCGA-CS-5394 
"AMP PEAK  7(11Q23.3) WILD-TYPE" "AMP PEAK  7(11Q23.3) WILD-TYPE" 
                    TCGA-CS-5395                     TCGA-CS-5396 
"AMP PEAK  7(11Q23.3) WILD-TYPE"   "AMP PEAK  7(11Q23.3) MUTATED" 
                    TCGA-CS-5397                     TCGA-CS-6186 
"AMP PEAK  7(11Q23.3) WILD-TYPE" "AMP PEAK  7(11Q23.3) WILD-TYPE" 
                    TCGA-CS-6188                     TCGA-CS-6290 
"AMP PEAK  7(11Q23.3) WILD-TYPE" "AMP PEAK  7(11Q23.3) WILD-TYPE" 
                    TCGA-CS-6665                     TCGA-CS-6666 
"AMP PEAK  7(11Q23.3) WILD-TYPE" "AMP PEAK  7(11Q23.3) WILD-TYPE" 
                    TCGA-CS-6667                     TCGA-CS-6668 
"AMP PEAK  7(11Q23.3) WILD-TYPE" "AMP PEAK  7(11Q23.3) WILD-TYPE" 
                    TCGA-CS-6669                     TCGA-CS-6670 
"AMP PEAK  7(11Q23.3) WILD-TYPE" "AMP PEAK  7(11Q23.3) WILD-TYPE" 
                    TCGA-DB-5270                     TCGA-DB-5273 
"AMP PEAK  7(11Q23.3) WILD-TYPE" "AMP PEAK  7(11Q23.3) WILD-TYPE" 
                    TCGA-DB-5274                     TCGA-DB-5275 
"AMP PEAK  7(11Q23.3) WILD-TYPE" "AMP PEAK  7(11Q23.3) WILD-TYPE" 
                    TCGA-DB-5276                     TCGA-DB-5277 
"AMP PEAK  7(11Q23.3) WILD-TYPE"   "AMP PEAK  7(11Q23.3) MUTATED" 
                    TCGA-DB-5278                     TCGA-DB-5279 
"AMP PEAK  7(11Q23.3) WILD-TYPE" "AMP PEAK  7(11Q23.3) WILD-TYPE" 
                    TCGA-DB-5280                     TCGA-DB-5281 
"AMP PEAK  7(11Q23.3) WILD-TYPE" "AMP PEAK  7(11Q23.3) WILD-TYPE" 
                    TCGA-DH-5140                     TCGA-DH-5141 
"AMP PEAK  7(11Q23.3) WILD-TYPE" "AMP PEAK  7(11Q23.3) WILD-TYPE" 
                    TCGA-DH-5142                     TCGA-DH-5143 
"AMP PEAK  7(11Q23.3) WILD-TYPE" "AMP PEAK  7(11Q23.3) WILD-TYPE" 
                    TCGA-DH-5144                     TCGA-DU-5847 
  "AMP PEAK  7(11Q23.3) MUTATED" "AMP PEAK  7(11Q23.3) WILD-TYPE" 
                    TCGA-DU-5849                     TCGA-DU-5851 
"AMP PEAK  7(11Q23.3) WILD-TYPE" "AMP PEAK  7(11Q23.3) WILD-TYPE" 
                    TCGA-DU-5852                     TCGA-DU-5853 
  "AMP PEAK  7(11Q23.3) MUTATED" "AMP PEAK  7(11Q23.3) WILD-TYPE" 
                    TCGA-DU-5854                     TCGA-DU-5855 
"AMP PEAK  7(11Q23.3) WILD-TYPE"   "AMP PEAK  7(11Q23.3) MUTATED" 
                    TCGA-DU-5870                     TCGA-DU-5871 
  "AMP PEAK  7(11Q23.3) MUTATED"   "AMP PEAK  7(11Q23.3) MUTATED" 
                    TCGA-DU-5872                     TCGA-DU-5874 
"AMP PEAK  7(11Q23.3) WILD-TYPE" "AMP PEAK  7(11Q23.3) WILD-TYPE" 
                    TCGA-DU-6392                     TCGA-DU-6393 
  "AMP PEAK  7(11Q23.3) MUTATED"   "AMP PEAK  7(11Q23.3) MUTATED" 
                    TCGA-DU-6394                     TCGA-DU-6395 
"AMP PEAK  7(11Q23.3) WILD-TYPE" "AMP PEAK  7(11Q23.3) WILD-TYPE" 
                    TCGA-DU-6396                     TCGA-DU-6397 
  "AMP PEAK  7(11Q23.3) MUTATED"   "AMP PEAK  7(11Q23.3) MUTATED" 
                    TCGA-DU-6399                     TCGA-DU-6400 
"AMP PEAK  7(11Q23.3) WILD-TYPE"   "AMP PEAK  7(11Q23.3) MUTATED" 
                    TCGA-DU-6401                     TCGA-DU-6402 
"AMP PEAK  7(11Q23.3) WILD-TYPE" "AMP PEAK  7(11Q23.3) WILD-TYPE" 
                    TCGA-DU-6403                     TCGA-DU-6404 
"AMP PEAK  7(11Q23.3) WILD-TYPE" "AMP PEAK  7(11Q23.3) WILD-TYPE" 
                    TCGA-DU-6405                     TCGA-DU-6406 
"AMP PEAK  7(11Q23.3) WILD-TYPE" "AMP PEAK  7(11Q23.3) WILD-TYPE" 
                    TCGA-DU-6407                     TCGA-DU-6408 
  "AMP PEAK  7(11Q23.3) MUTATED" "AMP PEAK  7(11Q23.3) WILD-TYPE" 
                    TCGA-DU-6410                     TCGA-DU-6542 
"AMP PEAK  7(11Q23.3) WILD-TYPE" "AMP PEAK  7(11Q23.3) WILD-TYPE" 
                    TCGA-DU-7006                     TCGA-DU-7007 
"AMP PEAK  7(11Q23.3) WILD-TYPE" "AMP PEAK  7(11Q23.3) WILD-TYPE" 
                    TCGA-DU-7008                     TCGA-DU-7009 
"AMP PEAK  7(11Q23.3) WILD-TYPE" "AMP PEAK  7(11Q23.3) WILD-TYPE" 
                    TCGA-DU-7010                     TCGA-DU-7011 
"AMP PEAK  7(11Q23.3) WILD-TYPE" "AMP PEAK  7(11Q23.3) WILD-TYPE" 
                    TCGA-DU-7012                     TCGA-DU-7013 
"AMP PEAK  7(11Q23.3) WILD-TYPE" "AMP PEAK  7(11Q23.3) WILD-TYPE" 
                    TCGA-DU-7014                     TCGA-DU-7015 
"AMP PEAK  7(11Q23.3) WILD-TYPE"   "AMP PEAK  7(11Q23.3) MUTATED" 
                    TCGA-DU-7018                     TCGA-DU-7019 
  "AMP PEAK  7(11Q23.3) MUTATED" "AMP PEAK  7(11Q23.3) WILD-TYPE" 
                    TCGA-DU-7290                     TCGA-DU-7292 
"AMP PEAK  7(11Q23.3) WILD-TYPE" "AMP PEAK  7(11Q23.3) WILD-TYPE" 
                    TCGA-DU-7294                     TCGA-DU-7298 
"AMP PEAK  7(11Q23.3) WILD-TYPE"   "AMP PEAK  7(11Q23.3) MUTATED" 
                    TCGA-DU-7299                     TCGA-DU-7300 
"AMP PEAK  7(11Q23.3) WILD-TYPE" "AMP PEAK  7(11Q23.3) WILD-TYPE" 
                    TCGA-DU-7301                     TCGA-DU-7302 
  "AMP PEAK  7(11Q23.3) MUTATED" "AMP PEAK  7(11Q23.3) WILD-TYPE" 
                    TCGA-DU-7304                     TCGA-DU-7306 
  "AMP PEAK  7(11Q23.3) MUTATED"   "AMP PEAK  7(11Q23.3) MUTATED" 
                    TCGA-DU-7309                     TCGA-E1-5302 
  "AMP PEAK  7(11Q23.3) MUTATED" "AMP PEAK  7(11Q23.3) WILD-TYPE" 
                    TCGA-E1-5303                     TCGA-E1-5304 
"AMP PEAK  7(11Q23.3) WILD-TYPE"   "AMP PEAK  7(11Q23.3) MUTATED" 
                    TCGA-E1-5305                     TCGA-E1-5307 
"AMP PEAK  7(11Q23.3) WILD-TYPE" "AMP PEAK  7(11Q23.3) WILD-TYPE" 
                    TCGA-E1-5311                     TCGA-E1-5318 
"AMP PEAK  7(11Q23.3) WILD-TYPE"   "AMP PEAK  7(11Q23.3) MUTATED" 
                    TCGA-E1-5319                     TCGA-E1-5322 
"AMP PEAK  7(11Q23.3) WILD-TYPE" "AMP PEAK  7(11Q23.3) WILD-TYPE" 
                    TCGA-EZ-7264                     TCGA-FG-5962 
"AMP PEAK  7(11Q23.3) WILD-TYPE"   "AMP PEAK  7(11Q23.3) MUTATED" 
                    TCGA-FG-5963                     TCGA-FG-5964 
"AMP PEAK  7(11Q23.3) WILD-TYPE" "AMP PEAK  7(11Q23.3) WILD-TYPE" 
                    TCGA-FG-5965                     TCGA-FG-6688 
"AMP PEAK  7(11Q23.3) WILD-TYPE" "AMP PEAK  7(11Q23.3) WILD-TYPE" 
                    TCGA-FG-6689                     TCGA-FG-6690 
"AMP PEAK  7(11Q23.3) WILD-TYPE" "AMP PEAK  7(11Q23.3) WILD-TYPE" 
                    TCGA-FG-6691                     TCGA-FG-6692 
"AMP PEAK  7(11Q23.3) WILD-TYPE" "AMP PEAK  7(11Q23.3) WILD-TYPE" 
                    TCGA-FG-7634                     TCGA-FG-7636 
  "AMP PEAK  7(11Q23.3) MUTATED" "AMP PEAK  7(11Q23.3) WILD-TYPE" 
                    TCGA-FG-7638                     TCGA-FG-7643 
"AMP PEAK  7(11Q23.3) WILD-TYPE" "AMP PEAK  7(11Q23.3) WILD-TYPE" 
                    TCGA-FN-7833                     TCGA-HT-7467 
"AMP PEAK  7(11Q23.3) WILD-TYPE" "AMP PEAK  7(11Q23.3) WILD-TYPE" 
                    TCGA-HT-7468                     TCGA-HT-7470 
"AMP PEAK  7(11Q23.3) WILD-TYPE"   "AMP PEAK  7(11Q23.3) MUTATED" 
                    TCGA-HT-7472                     TCGA-HT-7473 
"AMP PEAK  7(11Q23.3) WILD-TYPE" "AMP PEAK  7(11Q23.3) WILD-TYPE" 
                    TCGA-HT-7474                     TCGA-HT-7475 
  "AMP PEAK  7(11Q23.3) MUTATED" "AMP PEAK  7(11Q23.3) WILD-TYPE" 
                    TCGA-HT-7476                     TCGA-HT-7478 
"AMP PEAK  7(11Q23.3) WILD-TYPE" "AMP PEAK  7(11Q23.3) WILD-TYPE" 
                    TCGA-HT-7479                     TCGA-HT-7480 
"AMP PEAK  7(11Q23.3) WILD-TYPE" "AMP PEAK  7(11Q23.3) WILD-TYPE" 
                    TCGA-HT-7481                     TCGA-HT-7482 
"AMP PEAK  7(11Q23.3) WILD-TYPE" "AMP PEAK  7(11Q23.3) WILD-TYPE" 
                    TCGA-HT-7483                     TCGA-HT-7485 
"AMP PEAK  7(11Q23.3) WILD-TYPE" "AMP PEAK  7(11Q23.3) WILD-TYPE" 
                    TCGA-HT-7601                     TCGA-HT-7602 
  "AMP PEAK  7(11Q23.3) MUTATED" "AMP PEAK  7(11Q23.3) WILD-TYPE" 
                    TCGA-HT-7603                     TCGA-HT-7604 
"AMP PEAK  7(11Q23.3) WILD-TYPE"   "AMP PEAK  7(11Q23.3) MUTATED" 
                    TCGA-HT-7605                     TCGA-HT-7606 
"AMP PEAK  7(11Q23.3) WILD-TYPE" "AMP PEAK  7(11Q23.3) WILD-TYPE" 
                    TCGA-HT-7607                     TCGA-HT-7608 
  "AMP PEAK  7(11Q23.3) MUTATED" "AMP PEAK  7(11Q23.3) WILD-TYPE" 
                    TCGA-HT-7609                     TCGA-HT-7610 
"AMP PEAK  7(11Q23.3) WILD-TYPE" "AMP PEAK  7(11Q23.3) WILD-TYPE" 
                    TCGA-HW-7486                     TCGA-HW-7487 
"AMP PEAK  7(11Q23.3) WILD-TYPE" "AMP PEAK  7(11Q23.3) WILD-TYPE" 
                    TCGA-HW-7489                     TCGA-HW-7490 
"AMP PEAK  7(11Q23.3) WILD-TYPE"   "AMP PEAK  7(11Q23.3) MUTATED" 
                    TCGA-HW-7491                     TCGA-HW-7493 
"AMP PEAK  7(11Q23.3) WILD-TYPE" "AMP PEAK  7(11Q23.3) WILD-TYPE" 
                    TCGA-HW-7495                     TCGA-IK-7675 
"AMP PEAK  7(11Q23.3) WILD-TYPE" "AMP PEAK  7(11Q23.3) WILD-TYPE" 
                    TCGA-IK-8125 
"AMP PEAK  7(11Q23.3) WILD-TYPE" 
                    TCGA-CS-4938                     TCGA-CS-4941 
"AMP PEAK  7(11Q23.3) WILD-TYPE" "AMP PEAK  7(11Q23.3) WILD-TYPE" 
                    TCGA-CS-4942                     TCGA-CS-4943 
"AMP PEAK  7(11Q23.3) WILD-TYPE" "AMP PEAK  7(11Q23.3) WILD-TYPE" 
                    TCGA-CS-4944                     TCGA-CS-5390 
"AMP PEAK  7(11Q23.3) WILD-TYPE" "AMP PEAK  7(11Q23.3) WILD-TYPE" 
                    TCGA-CS-5393                     TCGA-CS-5394 
"AMP PEAK  7(11Q23.3) WILD-TYPE" "AMP PEAK  7(11Q23.3) WILD-TYPE" 
                    TCGA-CS-5395                     TCGA-CS-5396 
"AMP PEAK  7(11Q23.3) WILD-TYPE"   "AMP PEAK  7(11Q23.3) MUTATED" 
                    TCGA-CS-5397                     TCGA-CS-6186 
"AMP PEAK  7(11Q23.3) WILD-TYPE" "AMP PEAK  7(11Q23.3) WILD-TYPE" 
                    TCGA-CS-6188                     TCGA-CS-6290 
"AMP PEAK  7(11Q23.3) WILD-TYPE" "AMP PEAK  7(11Q23.3) WILD-TYPE" 
                    TCGA-CS-6665                     TCGA-CS-6666 
"AMP PEAK  7(11Q23.3) WILD-TYPE" "AMP PEAK  7(11Q23.3) WILD-TYPE" 
                    TCGA-CS-6667                     TCGA-CS-6668 
"AMP PEAK  7(11Q23.3) WILD-TYPE" "AMP PEAK  7(11Q23.3) WILD-TYPE" 
                    TCGA-CS-6669                     TCGA-CS-6670 
"AMP PEAK  7(11Q23.3) WILD-TYPE" "AMP PEAK  7(11Q23.3) WILD-TYPE" 
                    TCGA-DB-5270                     TCGA-DB-5273 
"AMP PEAK  7(11Q23.3) WILD-TYPE" "AMP PEAK  7(11Q23.3) WILD-TYPE" 
                    TCGA-DB-5274                     TCGA-DB-5275 
"AMP PEAK  7(11Q23.3) WILD-TYPE" "AMP PEAK  7(11Q23.3) WILD-TYPE" 
                    TCGA-DB-5276                     TCGA-DB-5277 
"AMP PEAK  7(11Q23.3) WILD-TYPE"   "AMP PEAK  7(11Q23.3) MUTATED" 
                    TCGA-DB-5278                     TCGA-DB-5279 
"AMP PEAK  7(11Q23.3) WILD-TYPE" "AMP PEAK  7(11Q23.3) WILD-TYPE" 
                    TCGA-DB-5280                     TCGA-DB-5281 
"AMP PEAK  7(11Q23.3) WILD-TYPE" "AMP PEAK  7(11Q23.3) WILD-TYPE" 
                    TCGA-DH-5140                     TCGA-DH-5141 
"AMP PEAK  7(11Q23.3) WILD-TYPE" "AMP PEAK  7(11Q23.3) WILD-TYPE" 
                    TCGA-DH-5142                     TCGA-DH-5143 
"AMP PEAK  7(11Q23.3) WILD-TYPE" "AMP PEAK  7(11Q23.3) WILD-TYPE" 
                    TCGA-DH-5144                     TCGA-DU-5847 
  "AMP PEAK  7(11Q23.3) MUTATED" "AMP PEAK  7(11Q23.3) WILD-TYPE" 
                    TCGA-DU-5849                     TCGA-DU-5851 
"AMP PEAK  7(11Q23.3) WILD-TYPE" "AMP PEAK  7(11Q23.3) WILD-TYPE" 
                    TCGA-DU-5852                     TCGA-DU-5853 
  "AMP PEAK  7(11Q23.3) MUTATED" "AMP PEAK  7(11Q23.3) WILD-TYPE" 
                    TCGA-DU-5854                     TCGA-DU-5855 
"AMP PEAK  7(11Q23.3) WILD-TYPE"   "AMP PEAK  7(11Q23.3) MUTATED" 
                    TCGA-DU-5870                     TCGA-DU-5871 
  "AMP PEAK  7(11Q23.3) MUTATED"   "AMP PEAK  7(11Q23.3) MUTATED" 
                    TCGA-DU-5872                     TCGA-DU-5874 
"AMP PEAK  7(11Q23.3) WILD-TYPE" "AMP PEAK  7(11Q23.3) WILD-TYPE" 
                    TCGA-DU-6392                     TCGA-DU-6393 
  "AMP PEAK  7(11Q23.3) MUTATED"   "AMP PEAK  7(11Q23.3) MUTATED" 
                    TCGA-DU-6394                     TCGA-DU-6395 
"AMP PEAK  7(11Q23.3) WILD-TYPE" "AMP PEAK  7(11Q23.3) WILD-TYPE" 
                    TCGA-DU-6396                     TCGA-DU-6397 
  "AMP PEAK  7(11Q23.3) MUTATED"   "AMP PEAK  7(11Q23.3) MUTATED" 
                    TCGA-DU-6399                     TCGA-DU-6400 
"AMP PEAK  7(11Q23.3) WILD-TYPE"   "AMP PEAK  7(11Q23.3) MUTATED" 
                    TCGA-DU-6401                     TCGA-DU-6402 
"AMP PEAK  7(11Q23.3) WILD-TYPE" "AMP PEAK  7(11Q23.3) WILD-TYPE" 
                    TCGA-DU-6403                     TCGA-DU-6404 
"AMP PEAK  7(11Q23.3) WILD-TYPE" "AMP PEAK  7(11Q23.3) WILD-TYPE" 
                    TCGA-DU-6405                     TCGA-DU-6406 
"AMP PEAK  7(11Q23.3) WILD-TYPE" "AMP PEAK  7(11Q23.3) WILD-TYPE" 
                    TCGA-DU-6407                     TCGA-DU-6408 
  "AMP PEAK  7(11Q23.3) MUTATED" "AMP PEAK  7(11Q23.3) WILD-TYPE" 
                    TCGA-DU-6410                     TCGA-DU-6542 
"AMP PEAK  7(11Q23.3) WILD-TYPE" "AMP PEAK  7(11Q23.3) WILD-TYPE" 
                    TCGA-DU-7006                     TCGA-DU-7007 
"AMP PEAK  7(11Q23.3) WILD-TYPE" "AMP PEAK  7(11Q23.3) WILD-TYPE" 
                    TCGA-DU-7008                     TCGA-DU-7009 
"AMP PEAK  7(11Q23.3) WILD-TYPE" "AMP PEAK  7(11Q23.3) WILD-TYPE" 
                    TCGA-DU-7010                     TCGA-DU-7011 
"AMP PEAK  7(11Q23.3) WILD-TYPE" "AMP PEAK  7(11Q23.3) WILD-TYPE" 
                    TCGA-DU-7012                     TCGA-DU-7013 
"AMP PEAK  7(11Q23.3) WILD-TYPE" "AMP PEAK  7(11Q23.3) WILD-TYPE" 
                    TCGA-DU-7014                     TCGA-DU-7015 
"AMP PEAK  7(11Q23.3) WILD-TYPE"   "AMP PEAK  7(11Q23.3) MUTATED" 
                    TCGA-DU-7018                     TCGA-DU-7019 
  "AMP PEAK  7(11Q23.3) MUTATED" "AMP PEAK  7(11Q23.3) WILD-TYPE" 
                    TCGA-DU-7290                     TCGA-DU-7292 
"AMP PEAK  7(11Q23.3) WILD-TYPE" "AMP PEAK  7(11Q23.3) WILD-TYPE" 
                    TCGA-DU-7294                     TCGA-DU-7298 
"AMP PEAK  7(11Q23.3) WILD-TYPE"   "AMP PEAK  7(11Q23.3) MUTATED" 
                    TCGA-DU-7299                     TCGA-DU-7300 
"AMP PEAK  7(11Q23.3) WILD-TYPE" "AMP PEAK  7(11Q23.3) WILD-TYPE" 
                    TCGA-DU-7301                     TCGA-DU-7302 
  "AMP PEAK  7(11Q23.3) MUTATED" "AMP PEAK  7(11Q23.3) WILD-TYPE" 
                    TCGA-DU-7304                     TCGA-DU-7306 
  "AMP PEAK  7(11Q23.3) MUTATED"   "AMP PEAK  7(11Q23.3) MUTATED" 
                    TCGA-DU-7309                     TCGA-E1-5302 
  "AMP PEAK  7(11Q23.3) MUTATED" "AMP PEAK  7(11Q23.3) WILD-TYPE" 
                    TCGA-E1-5303                     TCGA-E1-5304 
"AMP PEAK  7(11Q23.3) WILD-TYPE"   "AMP PEAK  7(11Q23.3) MUTATED" 
                    TCGA-E1-5305                     TCGA-E1-5307 
"AMP PEAK  7(11Q23.3) WILD-TYPE" "AMP PEAK  7(11Q23.3) WILD-TYPE" 
                    TCGA-E1-5311                     TCGA-E1-5318 
"AMP PEAK  7(11Q23.3) WILD-TYPE"   "AMP PEAK  7(11Q23.3) MUTATED" 
                    TCGA-E1-5319                     TCGA-E1-5322 
"AMP PEAK  7(11Q23.3) WILD-TYPE" "AMP PEAK  7(11Q23.3) WILD-TYPE" 
                    TCGA-EZ-7264                     TCGA-FG-5962 
"AMP PEAK  7(11Q23.3) WILD-TYPE"   "AMP PEAK  7(11Q23.3) MUTATED" 
                    TCGA-FG-5963                     TCGA-FG-5964 
"AMP PEAK  7(11Q23.3) WILD-TYPE" "AMP PEAK  7(11Q23.3) WILD-TYPE" 
                    TCGA-FG-5965                     TCGA-FG-6688 
"AMP PEAK  7(11Q23.3) WILD-TYPE" "AMP PEAK  7(11Q23.3) WILD-TYPE" 
                    TCGA-FG-6689                     TCGA-FG-6690 
"AMP PEAK  7(11Q23.3) WILD-TYPE" "AMP PEAK  7(11Q23.3) WILD-TYPE" 
                    TCGA-FG-6691                     TCGA-FG-6692 
"AMP PEAK  7(11Q23.3) WILD-TYPE" "AMP PEAK  7(11Q23.3) WILD-TYPE" 
                    TCGA-FG-7634                     TCGA-FG-7636 
  "AMP PEAK  7(11Q23.3) MUTATED" "AMP PEAK  7(11Q23.3) WILD-TYPE" 
                    TCGA-FG-7638                     TCGA-FG-7643 
"AMP PEAK  7(11Q23.3) WILD-TYPE" "AMP PEAK  7(11Q23.3) WILD-TYPE" 
                    TCGA-FN-7833                     TCGA-HT-7467 
"AMP PEAK  7(11Q23.3) WILD-TYPE" "AMP PEAK  7(11Q23.3) WILD-TYPE" 
                    TCGA-HT-7468                     TCGA-HT-7470 
"AMP PEAK  7(11Q23.3) WILD-TYPE"   "AMP PEAK  7(11Q23.3) MUTATED" 
                    TCGA-HT-7472                     TCGA-HT-7473 
"AMP PEAK  7(11Q23.3) WILD-TYPE" "AMP PEAK  7(11Q23.3) WILD-TYPE" 
                    TCGA-HT-7474                     TCGA-HT-7475 
  "AMP PEAK  7(11Q23.3) MUTATED" "AMP PEAK  7(11Q23.3) WILD-TYPE" 
                    TCGA-HT-7476                     TCGA-HT-7478 
"AMP PEAK  7(11Q23.3) WILD-TYPE" "AMP PEAK  7(11Q23.3) WILD-TYPE" 
                    TCGA-HT-7479                     TCGA-HT-7480 
"AMP PEAK  7(11Q23.3) WILD-TYPE" "AMP PEAK  7(11Q23.3) WILD-TYPE" 
                    TCGA-HT-7481                     TCGA-HT-7482 
"AMP PEAK  7(11Q23.3) WILD-TYPE" "AMP PEAK  7(11Q23.3) WILD-TYPE" 
                    TCGA-HT-7483                     TCGA-HT-7485 
"AMP PEAK  7(11Q23.3) WILD-TYPE" "AMP PEAK  7(11Q23.3) WILD-TYPE" 
                    TCGA-HT-7601                     TCGA-HT-7602 
  "AMP PEAK  7(11Q23.3) MUTATED" "AMP PEAK  7(11Q23.3) WILD-TYPE" 
                    TCGA-HT-7603                     TCGA-HT-7604 
"AMP PEAK  7(11Q23.3) WILD-TYPE"   "AMP PEAK  7(11Q23.3) MUTATED" 
                    TCGA-HT-7605                     TCGA-HT-7606 
"AMP PEAK  7(11Q23.3) WILD-TYPE" "AMP PEAK  7(11Q23.3) WILD-TYPE" 
                    TCGA-HT-7607                     TCGA-HT-7608 
  "AMP PEAK  7(11Q23.3) MUTATED" "AMP PEAK  7(11Q23.3) WILD-TYPE" 
                    TCGA-HT-7609                     TCGA-HT-7610 
"AMP PEAK  7(11Q23.3) WILD-TYPE" "AMP PEAK  7(11Q23.3) WILD-TYPE" 
                    TCGA-HW-7486                     TCGA-HW-7487 
"AMP PEAK  7(11Q23.3) WILD-TYPE" "AMP PEAK  7(11Q23.3) WILD-TYPE" 
                    TCGA-HW-7489                     TCGA-HW-7490 
"AMP PEAK  7(11Q23.3) WILD-TYPE"   "AMP PEAK  7(11Q23.3) MUTATED" 
                    TCGA-HW-7491                     TCGA-HW-7493 
"AMP PEAK  7(11Q23.3) WILD-TYPE" "AMP PEAK  7(11Q23.3) WILD-TYPE" 
                    TCGA-HW-7495                     TCGA-IK-7675 
"AMP PEAK  7(11Q23.3) WILD-TYPE" "AMP PEAK  7(11Q23.3) WILD-TYPE" 
                    TCGA-IK-8125 
"AMP PEAK  7(11Q23.3) WILD-TYPE" 
                    TCGA-CS-4938                     TCGA-CS-4941 
"AMP PEAK  7(11Q23.3) WILD-TYPE" "AMP PEAK  7(11Q23.3) WILD-TYPE" 
                    TCGA-CS-4942                     TCGA-CS-4943 
"AMP PEAK  7(11Q23.3) WILD-TYPE" "AMP PEAK  7(11Q23.3) WILD-TYPE" 
                    TCGA-CS-4944                     TCGA-CS-5390 
"AMP PEAK  7(11Q23.3) WILD-TYPE" "AMP PEAK  7(11Q23.3) WILD-TYPE" 
                    TCGA-CS-5393                     TCGA-CS-5394 
"AMP PEAK  7(11Q23.3) WILD-TYPE" "AMP PEAK  7(11Q23.3) WILD-TYPE" 
                    TCGA-CS-5395                     TCGA-CS-5396 
"AMP PEAK  7(11Q23.3) WILD-TYPE"   "AMP PEAK  7(11Q23.3) MUTATED" 
                    TCGA-CS-5397                     TCGA-CS-6186 
"AMP PEAK  7(11Q23.3) WILD-TYPE" "AMP PEAK  7(11Q23.3) WILD-TYPE" 
                    TCGA-CS-6188                     TCGA-CS-6290 
"AMP PEAK  7(11Q23.3) WILD-TYPE" "AMP PEAK  7(11Q23.3) WILD-TYPE" 
                    TCGA-CS-6665                     TCGA-CS-6666 
"AMP PEAK  7(11Q23.3) WILD-TYPE" "AMP PEAK  7(11Q23.3) WILD-TYPE" 
                    TCGA-CS-6667                     TCGA-CS-6668 
"AMP PEAK  7(11Q23.3) WILD-TYPE" "AMP PEAK  7(11Q23.3) WILD-TYPE" 
                    TCGA-CS-6669                     TCGA-CS-6670 
"AMP PEAK  7(11Q23.3) WILD-TYPE" "AMP PEAK  7(11Q23.3) WILD-TYPE" 
                    TCGA-DB-5270                     TCGA-DB-5273 
"AMP PEAK  7(11Q23.3) WILD-TYPE" "AMP PEAK  7(11Q23.3) WILD-TYPE" 
                    TCGA-DB-5274                     TCGA-DB-5275 
"AMP PEAK  7(11Q23.3) WILD-TYPE" "AMP PEAK  7(11Q23.3) WILD-TYPE" 
                    TCGA-DB-5276                     TCGA-DB-5277 
"AMP PEAK  7(11Q23.3) WILD-TYPE"   "AMP PEAK  7(11Q23.3) MUTATED" 
                    TCGA-DB-5278                     TCGA-DB-5279 
"AMP PEAK  7(11Q23.3) WILD-TYPE" "AMP PEAK  7(11Q23.3) WILD-TYPE" 
                    TCGA-DB-5280                     TCGA-DB-5281 
"AMP PEAK  7(11Q23.3) WILD-TYPE" "AMP PEAK  7(11Q23.3) WILD-TYPE" 
                    TCGA-DH-5140                     TCGA-DH-5141 
"AMP PEAK  7(11Q23.3) WILD-TYPE" "AMP PEAK  7(11Q23.3) WILD-TYPE" 
                    TCGA-DH-5142                     TCGA-DH-5143 
"AMP PEAK  7(11Q23.3) WILD-TYPE" "AMP PEAK  7(11Q23.3) WILD-TYPE" 
                    TCGA-DH-5144                     TCGA-DU-5847 
  "AMP PEAK  7(11Q23.3) MUTATED" "AMP PEAK  7(11Q23.3) WILD-TYPE" 
                    TCGA-DU-5849                     TCGA-DU-5851 
"AMP PEAK  7(11Q23.3) WILD-TYPE" "AMP PEAK  7(11Q23.3) WILD-TYPE" 
                    TCGA-DU-5852                     TCGA-DU-5853 
  "AMP PEAK  7(11Q23.3) MUTATED" "AMP PEAK  7(11Q23.3) WILD-TYPE" 
                    TCGA-DU-5854                     TCGA-DU-5855 
"AMP PEAK  7(11Q23.3) WILD-TYPE"   "AMP PEAK  7(11Q23.3) MUTATED" 
                    TCGA-DU-5870                     TCGA-DU-5871 
  "AMP PEAK  7(11Q23.3) MUTATED"   "AMP PEAK  7(11Q23.3) MUTATED" 
                    TCGA-DU-5872                     TCGA-DU-5874 
"AMP PEAK  7(11Q23.3) WILD-TYPE" "AMP PEAK  7(11Q23.3) WILD-TYPE" 
                    TCGA-DU-6392                     TCGA-DU-6393 
  "AMP PEAK  7(11Q23.3) MUTATED"   "AMP PEAK  7(11Q23.3) MUTATED" 
                    TCGA-DU-6394                     TCGA-DU-6395 
"AMP PEAK  7(11Q23.3) WILD-TYPE" "AMP PEAK  7(11Q23.3) WILD-TYPE" 
                    TCGA-DU-6396                     TCGA-DU-6397 
  "AMP PEAK  7(11Q23.3) MUTATED"   "AMP PEAK  7(11Q23.3) MUTATED" 
                    TCGA-DU-6399                     TCGA-DU-6400 
"AMP PEAK  7(11Q23.3) WILD-TYPE"   "AMP PEAK  7(11Q23.3) MUTATED" 
                    TCGA-DU-6401                     TCGA-DU-6402 
"AMP PEAK  7(11Q23.3) WILD-TYPE" "AMP PEAK  7(11Q23.3) WILD-TYPE" 
                    TCGA-DU-6403                     TCGA-DU-6404 
"AMP PEAK  7(11Q23.3) WILD-TYPE" "AMP PEAK  7(11Q23.3) WILD-TYPE" 
                    TCGA-DU-6405                     TCGA-DU-6406 
"AMP PEAK  7(11Q23.3) WILD-TYPE" "AMP PEAK  7(11Q23.3) WILD-TYPE" 
                    TCGA-DU-6407                     TCGA-DU-6408 
  "AMP PEAK  7(11Q23.3) MUTATED" "AMP PEAK  7(11Q23.3) WILD-TYPE" 
                    TCGA-DU-6410                     TCGA-DU-6542 
"AMP PEAK  7(11Q23.3) WILD-TYPE" "AMP PEAK  7(11Q23.3) WILD-TYPE" 
                    TCGA-DU-7006                     TCGA-DU-7007 
"AMP PEAK  7(11Q23.3) WILD-TYPE" "AMP PEAK  7(11Q23.3) WILD-TYPE" 
                    TCGA-DU-7008                     TCGA-DU-7009 
"AMP PEAK  7(11Q23.3) WILD-TYPE" "AMP PEAK  7(11Q23.3) WILD-TYPE" 
                    TCGA-DU-7010                     TCGA-DU-7011 
"AMP PEAK  7(11Q23.3) WILD-TYPE" "AMP PEAK  7(11Q23.3) WILD-TYPE" 
                    TCGA-DU-7012                     TCGA-DU-7013 
"AMP PEAK  7(11Q23.3) WILD-TYPE" "AMP PEAK  7(11Q23.3) WILD-TYPE" 
                    TCGA-DU-7014                     TCGA-DU-7015 
"AMP PEAK  7(11Q23.3) WILD-TYPE"   "AMP PEAK  7(11Q23.3) MUTATED" 
                    TCGA-DU-7018                     TCGA-DU-7019 
  "AMP PEAK  7(11Q23.3) MUTATED" "AMP PEAK  7(11Q23.3) WILD-TYPE" 
                    TCGA-DU-7290                     TCGA-DU-7292 
"AMP PEAK  7(11Q23.3) WILD-TYPE" "AMP PEAK  7(11Q23.3) WILD-TYPE" 
                    TCGA-DU-7294                     TCGA-DU-7298 
"AMP PEAK  7(11Q23.3) WILD-TYPE"   "AMP PEAK  7(11Q23.3) MUTATED" 
                    TCGA-DU-7299                     TCGA-DU-7300 
"AMP PEAK  7(11Q23.3) WILD-TYPE" "AMP PEAK  7(11Q23.3) WILD-TYPE" 
                    TCGA-DU-7301                     TCGA-DU-7302 
  "AMP PEAK  7(11Q23.3) MUTATED" "AMP PEAK  7(11Q23.3) WILD-TYPE" 
                    TCGA-DU-7304                     TCGA-DU-7306 
  "AMP PEAK  7(11Q23.3) MUTATED"   "AMP PEAK  7(11Q23.3) MUTATED" 
                    TCGA-DU-7309                     TCGA-E1-5302 
  "AMP PEAK  7(11Q23.3) MUTATED" "AMP PEAK  7(11Q23.3) WILD-TYPE" 
                    TCGA-E1-5303                     TCGA-E1-5304 
"AMP PEAK  7(11Q23.3) WILD-TYPE"   "AMP PEAK  7(11Q23.3) MUTATED" 
                    TCGA-E1-5305                     TCGA-E1-5307 
"AMP PEAK  7(11Q23.3) WILD-TYPE" "AMP PEAK  7(11Q23.3) WILD-TYPE" 
                    TCGA-E1-5311                     TCGA-E1-5318 
"AMP PEAK  7(11Q23.3) WILD-TYPE"   "AMP PEAK  7(11Q23.3) MUTATED" 
                    TCGA-E1-5319                     TCGA-E1-5322 
"AMP PEAK  7(11Q23.3) WILD-TYPE" "AMP PEAK  7(11Q23.3) WILD-TYPE" 
                    TCGA-EZ-7264                     TCGA-FG-5962 
"AMP PEAK  7(11Q23.3) WILD-TYPE"   "AMP PEAK  7(11Q23.3) MUTATED" 
                    TCGA-FG-5963                     TCGA-FG-5964 
"AMP PEAK  7(11Q23.3) WILD-TYPE" "AMP PEAK  7(11Q23.3) WILD-TYPE" 
                    TCGA-FG-5965                     TCGA-FG-6688 
"AMP PEAK  7(11Q23.3) WILD-TYPE" "AMP PEAK  7(11Q23.3) WILD-TYPE" 
                    TCGA-FG-6689                     TCGA-FG-6690 
"AMP PEAK  7(11Q23.3) WILD-TYPE" "AMP PEAK  7(11Q23.3) WILD-TYPE" 
                    TCGA-FG-6691                     TCGA-FG-6692 
"AMP PEAK  7(11Q23.3) WILD-TYPE" "AMP PEAK  7(11Q23.3) WILD-TYPE" 
                    TCGA-FG-7634                     TCGA-FG-7636 
  "AMP PEAK  7(11Q23.3) MUTATED" "AMP PEAK  7(11Q23.3) WILD-TYPE" 
                    TCGA-FG-7638                     TCGA-FG-7643 
"AMP PEAK  7(11Q23.3) WILD-TYPE" "AMP PEAK  7(11Q23.3) WILD-TYPE" 
                    TCGA-FN-7833                     TCGA-HT-7467 
"AMP PEAK  7(11Q23.3) WILD-TYPE" "AMP PEAK  7(11Q23.3) WILD-TYPE" 
                    TCGA-HT-7468                     TCGA-HT-7470 
"AMP PEAK  7(11Q23.3) WILD-TYPE"   "AMP PEAK  7(11Q23.3) MUTATED" 
                    TCGA-HT-7472                     TCGA-HT-7473 
"AMP PEAK  7(11Q23.3) WILD-TYPE" "AMP PEAK  7(11Q23.3) WILD-TYPE" 
                    TCGA-HT-7474                     TCGA-HT-7475 
  "AMP PEAK  7(11Q23.3) MUTATED" "AMP PEAK  7(11Q23.3) WILD-TYPE" 
                    TCGA-HT-7476                     TCGA-HT-7478 
"AMP PEAK  7(11Q23.3) WILD-TYPE" "AMP PEAK  7(11Q23.3) WILD-TYPE" 
                    TCGA-HT-7479                     TCGA-HT-7480 
"AMP PEAK  7(11Q23.3) WILD-TYPE" "AMP PEAK  7(11Q23.3) WILD-TYPE" 
                    TCGA-HT-7481                     TCGA-HT-7482 
"AMP PEAK  7(11Q23.3) WILD-TYPE" "AMP PEAK  7(11Q23.3) WILD-TYPE" 
                    TCGA-HT-7483                     TCGA-HT-7485 
"AMP PEAK  7(11Q23.3) WILD-TYPE" "AMP PEAK  7(11Q23.3) WILD-TYPE" 
                    TCGA-HT-7601                     TCGA-HT-7602 
  "AMP PEAK  7(11Q23.3) MUTATED" "AMP PEAK  7(11Q23.3) WILD-TYPE" 
                    TCGA-HT-7603                     TCGA-HT-7604 
"AMP PEAK  7(11Q23.3) WILD-TYPE"   "AMP PEAK  7(11Q23.3) MUTATED" 
                    TCGA-HT-7605                     TCGA-HT-7606 
"AMP PEAK  7(11Q23.3) WILD-TYPE" "AMP PEAK  7(11Q23.3) WILD-TYPE" 
                    TCGA-HT-7607                     TCGA-HT-7608 
  "AMP PEAK  7(11Q23.3) MUTATED" "AMP PEAK  7(11Q23.3) WILD-TYPE" 
                    TCGA-HT-7609                     TCGA-HT-7610 
"AMP PEAK  7(11Q23.3) WILD-TYPE" "AMP PEAK  7(11Q23.3) WILD-TYPE" 
                    TCGA-HW-7486                     TCGA-HW-7487 
"AMP PEAK  7(11Q23.3) WILD-TYPE" "AMP PEAK  7(11Q23.3) WILD-TYPE" 
                    TCGA-HW-7489                     TCGA-HW-7490 
"AMP PEAK  7(11Q23.3) WILD-TYPE"   "AMP PEAK  7(11Q23.3) MUTATED" 
                    TCGA-HW-7491                     TCGA-HW-7493 
"AMP PEAK  7(11Q23.3) WILD-TYPE" "AMP PEAK  7(11Q23.3) WILD-TYPE" 
                    TCGA-HW-7495                     TCGA-IK-7675 
"AMP PEAK  7(11Q23.3) WILD-TYPE" "AMP PEAK  7(11Q23.3) WILD-TYPE" 
                    TCGA-IK-8125 
"AMP PEAK  7(11Q23.3) WILD-TYPE" 
[1] "hr=" "1.2"
D7V2, continuous
D7V3, binary
[1] "tbl2"
                                cls
clus                             [,1] [,2]
  AMP PEAK  7(11Q23.3) MUTATED     17   13
  AMP PEAK  7(11Q23.3) WILD-TYPE   45   70
        clus
vv       AMP PEAK  7(11Q23.3) MUTATED AMP PEAK  7(11Q23.3) WILD-TYPE
  FEMALE                           17                             45
  MALE                             13                             70
D7V4, continuous
D7V5, multiclass
                   clus
vv                  AMP PEAK  7(11Q23.3) MUTATED AMP PEAK  7(11Q23.3) WILD-TYPE
  ASTROCYTOMA                                  8                             42
  OLIGOASTROCYTOMA                             7                             29
  OLIGODENDROGLIOMA                           15                             43
D7V6, binary
[1] "tbl2"
                                cls
clus                             [,1] [,2]
  AMP PEAK  7(11Q23.3) MUTATED     11   19
  AMP PEAK  7(11Q23.3) WILD-TYPE   48   67
     clus
vv    AMP PEAK  7(11Q23.3) MUTATED AMP PEAK  7(11Q23.3) WILD-TYPE
  NO                            19                             67
  YES                           11                             48
D7V7, binary
[1] "tbl2"
                                cls
clus                             [,1] [,2]
  AMP PEAK  7(11Q23.3) MUTATED     15   15
  AMP PEAK  7(11Q23.3) WILD-TYPE   59   56
     clus
vv    AMP PEAK  7(11Q23.3) MUTATED AMP PEAK  7(11Q23.3) WILD-TYPE
  NO                            15                             56
  YES                           15                             59

Clustering(8) Variable = Amp Peak  8(12p13.32) mutation analysis
D8V1, survival
                     TCGA-CS-4938                      TCGA-CS-4941 
"AMP PEAK  8(12P13.32) WILD-TYPE" "AMP PEAK  8(12P13.32) WILD-TYPE" 
                     TCGA-CS-4942                      TCGA-CS-4943 
"AMP PEAK  8(12P13.32) WILD-TYPE"   "AMP PEAK  8(12P13.32) MUTATED" 
                     TCGA-CS-4944                      TCGA-CS-5390 
"AMP PEAK  8(12P13.32) WILD-TYPE" "AMP PEAK  8(12P13.32) WILD-TYPE" 
                     TCGA-CS-5393                      TCGA-CS-5394 
"AMP PEAK  8(12P13.32) WILD-TYPE" "AMP PEAK  8(12P13.32) WILD-TYPE" 
                     TCGA-CS-5395                      TCGA-CS-5396 
"AMP PEAK  8(12P13.32) WILD-TYPE" "AMP PEAK  8(12P13.32) WILD-TYPE" 
                     TCGA-CS-5397                      TCGA-CS-6186 
"AMP PEAK  8(12P13.32) WILD-TYPE" "AMP PEAK  8(12P13.32) WILD-TYPE" 
                     TCGA-CS-6188                      TCGA-CS-6290 
"AMP PEAK  8(12P13.32) WILD-TYPE" "AMP PEAK  8(12P13.32) WILD-TYPE" 
                     TCGA-CS-6665                      TCGA-CS-6666 
"AMP PEAK  8(12P13.32) WILD-TYPE" "AMP PEAK  8(12P13.32) WILD-TYPE" 
                     TCGA-CS-6667                      TCGA-CS-6668 
"AMP PEAK  8(12P13.32) WILD-TYPE" "AMP PEAK  8(12P13.32) WILD-TYPE" 
                     TCGA-CS-6669                      TCGA-CS-6670 
"AMP PEAK  8(12P13.32) WILD-TYPE" "AMP PEAK  8(12P13.32) WILD-TYPE" 
                     TCGA-DB-5270                      TCGA-DB-5273 
"AMP PEAK  8(12P13.32) WILD-TYPE"   "AMP PEAK  8(12P13.32) MUTATED" 
                     TCGA-DB-5274                      TCGA-DB-5275 
"AMP PEAK  8(12P13.32) WILD-TYPE"   "AMP PEAK  8(12P13.32) MUTATED" 
                     TCGA-DB-5276                      TCGA-DB-5277 
"AMP PEAK  8(12P13.32) WILD-TYPE"   "AMP PEAK  8(12P13.32) MUTATED" 
                     TCGA-DB-5278                      TCGA-DB-5279 
"AMP PEAK  8(12P13.32) WILD-TYPE" "AMP PEAK  8(12P13.32) WILD-TYPE" 
                     TCGA-DB-5280                      TCGA-DB-5281 
"AMP PEAK  8(12P13.32) WILD-TYPE"   "AMP PEAK  8(12P13.32) MUTATED" 
                     TCGA-DH-5140                      TCGA-DH-5141 
"AMP PEAK  8(12P13.32) WILD-TYPE" "AMP PEAK  8(12P13.32) WILD-TYPE" 
                     TCGA-DH-5142                      TCGA-DH-5143 
"AMP PEAK  8(12P13.32) WILD-TYPE" "AMP PEAK  8(12P13.32) WILD-TYPE" 
                     TCGA-DH-5144                      TCGA-DU-5847 
"AMP PEAK  8(12P13.32) WILD-TYPE" "AMP PEAK  8(12P13.32) WILD-TYPE" 
                     TCGA-DU-5849                      TCGA-DU-5851 
"AMP PEAK  8(12P13.32) WILD-TYPE" "AMP PEAK  8(12P13.32) WILD-TYPE" 
                     TCGA-DU-5852                      TCGA-DU-5853 
"AMP PEAK  8(12P13.32) WILD-TYPE" "AMP PEAK  8(12P13.32) WILD-TYPE" 
                     TCGA-DU-5854                      TCGA-DU-5855 
"AMP PEAK  8(12P13.32) WILD-TYPE" "AMP PEAK  8(12P13.32) WILD-TYPE" 
                     TCGA-DU-5870                      TCGA-DU-5871 
"AMP PEAK  8(12P13.32) WILD-TYPE" "AMP PEAK  8(12P13.32) WILD-TYPE" 
                     TCGA-DU-5872                      TCGA-DU-5874 
"AMP PEAK  8(12P13.32) WILD-TYPE" "AMP PEAK  8(12P13.32) WILD-TYPE" 
                     TCGA-DU-6392                      TCGA-DU-6393 
"AMP PEAK  8(12P13.32) WILD-TYPE" "AMP PEAK  8(12P13.32) WILD-TYPE" 
                     TCGA-DU-6394                      TCGA-DU-6395 
"AMP PEAK  8(12P13.32) WILD-TYPE"   "AMP PEAK  8(12P13.32) MUTATED" 
                     TCGA-DU-6396                      TCGA-DU-6397 
  "AMP PEAK  8(12P13.32) MUTATED" "AMP PEAK  8(12P13.32) WILD-TYPE" 
                     TCGA-DU-6399                      TCGA-DU-6400 
  "AMP PEAK  8(12P13.32) MUTATED"   "AMP PEAK  8(12P13.32) MUTATED" 
                     TCGA-DU-6401                      TCGA-DU-6402 
"AMP PEAK  8(12P13.32) WILD-TYPE" "AMP PEAK  8(12P13.32) WILD-TYPE" 
                     TCGA-DU-6403                      TCGA-DU-6404 
  "AMP PEAK  8(12P13.32) MUTATED" "AMP PEAK  8(12P13.32) WILD-TYPE" 
                     TCGA-DU-6405                      TCGA-DU-6406 
"AMP PEAK  8(12P13.32) WILD-TYPE" "AMP PEAK  8(12P13.32) WILD-TYPE" 
                     TCGA-DU-6407                      TCGA-DU-6408 
"AMP PEAK  8(12P13.32) WILD-TYPE"   "AMP PEAK  8(12P13.32) MUTATED" 
                     TCGA-DU-6410                      TCGA-DU-6542 
"AMP PEAK  8(12P13.32) WILD-TYPE" "AMP PEAK  8(12P13.32) WILD-TYPE" 
                     TCGA-DU-7006                      TCGA-DU-7007 
"AMP PEAK  8(12P13.32) WILD-TYPE"   "AMP PEAK  8(12P13.32) MUTATED" 
                     TCGA-DU-7008                      TCGA-DU-7009 
  "AMP PEAK  8(12P13.32) MUTATED" "AMP PEAK  8(12P13.32) WILD-TYPE" 
                     TCGA-DU-7010                      TCGA-DU-7011 
"AMP PEAK  8(12P13.32) WILD-TYPE" "AMP PEAK  8(12P13.32) WILD-TYPE" 
                     TCGA-DU-7012                      TCGA-DU-7013 
"AMP PEAK  8(12P13.32) WILD-TYPE" "AMP PEAK  8(12P13.32) WILD-TYPE" 
                     TCGA-DU-7014                      TCGA-DU-7015 
"AMP PEAK  8(12P13.32) WILD-TYPE" "AMP PEAK  8(12P13.32) WILD-TYPE" 
                     TCGA-DU-7018                      TCGA-DU-7019 
"AMP PEAK  8(12P13.32) WILD-TYPE" "AMP PEAK  8(12P13.32) WILD-TYPE" 
                     TCGA-DU-7290                      TCGA-DU-7292 
"AMP PEAK  8(12P13.32) WILD-TYPE" "AMP PEAK  8(12P13.32) WILD-TYPE" 
                     TCGA-DU-7294                      TCGA-DU-7298 
"AMP PEAK  8(12P13.32) WILD-TYPE" "AMP PEAK  8(12P13.32) WILD-TYPE" 
                     TCGA-DU-7299                      TCGA-DU-7300 
  "AMP PEAK  8(12P13.32) MUTATED" "AMP PEAK  8(12P13.32) WILD-TYPE" 
                     TCGA-DU-7301                      TCGA-DU-7302 
"AMP PEAK  8(12P13.32) WILD-TYPE" "AMP PEAK  8(12P13.32) WILD-TYPE" 
                     TCGA-DU-7304                      TCGA-DU-7306 
  "AMP PEAK  8(12P13.32) MUTATED" "AMP PEAK  8(12P13.32) WILD-TYPE" 
                     TCGA-DU-7309                      TCGA-E1-5302 
"AMP PEAK  8(12P13.32) WILD-TYPE" "AMP PEAK  8(12P13.32) WILD-TYPE" 
                     TCGA-E1-5303                      TCGA-E1-5304 
  "AMP PEAK  8(12P13.32) MUTATED"   "AMP PEAK  8(12P13.32) MUTATED" 
                     TCGA-E1-5305                      TCGA-E1-5307 
"AMP PEAK  8(12P13.32) WILD-TYPE" "AMP PEAK  8(12P13.32) WILD-TYPE" 
                     TCGA-E1-5311                      TCGA-E1-5318 
"AMP PEAK  8(12P13.32) WILD-TYPE" "AMP PEAK  8(12P13.32) WILD-TYPE" 
                     TCGA-E1-5319                      TCGA-E1-5322 
"AMP PEAK  8(12P13.32) WILD-TYPE" "AMP PEAK  8(12P13.32) WILD-TYPE" 
                     TCGA-EZ-7264                      TCGA-FG-5962 
"AMP PEAK  8(12P13.32) WILD-TYPE" "AMP PEAK  8(12P13.32) WILD-TYPE" 
                     TCGA-FG-5963                      TCGA-FG-5964 
"AMP PEAK  8(12P13.32) WILD-TYPE" "AMP PEAK  8(12P13.32) WILD-TYPE" 
                     TCGA-FG-5965                      TCGA-FG-6688 
  "AMP PEAK  8(12P13.32) MUTATED" "AMP PEAK  8(12P13.32) WILD-TYPE" 
                     TCGA-FG-6689                      TCGA-FG-6690 
"AMP PEAK  8(12P13.32) WILD-TYPE"   "AMP PEAK  8(12P13.32) MUTATED" 
                     TCGA-FG-6691                      TCGA-FG-6692 
  "AMP PEAK  8(12P13.32) MUTATED" "AMP PEAK  8(12P13.32) WILD-TYPE" 
                     TCGA-FG-7634                      TCGA-FG-7636 
  "AMP PEAK  8(12P13.32) MUTATED" "AMP PEAK  8(12P13.32) WILD-TYPE" 
                     TCGA-FG-7638                      TCGA-FG-7643 
"AMP PEAK  8(12P13.32) WILD-TYPE" "AMP PEAK  8(12P13.32) WILD-TYPE" 
                     TCGA-FN-7833                      TCGA-HT-7467 
"AMP PEAK  8(12P13.32) WILD-TYPE" "AMP PEAK  8(12P13.32) WILD-TYPE" 
                     TCGA-HT-7468                      TCGA-HT-7470 
"AMP PEAK  8(12P13.32) WILD-TYPE" "AMP PEAK  8(12P13.32) WILD-TYPE" 
                     TCGA-HT-7472                      TCGA-HT-7473 
"AMP PEAK  8(12P13.32) WILD-TYPE"   "AMP PEAK  8(12P13.32) MUTATED" 
                     TCGA-HT-7474                      TCGA-HT-7475 
"AMP PEAK  8(12P13.32) WILD-TYPE" "AMP PEAK  8(12P13.32) WILD-TYPE" 
                     TCGA-HT-7476                      TCGA-HT-7478 
"AMP PEAK  8(12P13.32) WILD-TYPE"   "AMP PEAK  8(12P13.32) MUTATED" 
                     TCGA-HT-7479                      TCGA-HT-7480 
"AMP PEAK  8(12P13.32) WILD-TYPE" "AMP PEAK  8(12P13.32) WILD-TYPE" 
                     TCGA-HT-7481                      TCGA-HT-7482 
"AMP PEAK  8(12P13.32) WILD-TYPE" "AMP PEAK  8(12P13.32) WILD-TYPE" 
                     TCGA-HT-7483                      TCGA-HT-7485 
"AMP PEAK  8(12P13.32) WILD-TYPE" "AMP PEAK  8(12P13.32) WILD-TYPE" 
                     TCGA-HT-7601                      TCGA-HT-7602 
"AMP PEAK  8(12P13.32) WILD-TYPE" "AMP PEAK  8(12P13.32) WILD-TYPE" 
                     TCGA-HT-7603                      TCGA-HT-7604 
"AMP PEAK  8(12P13.32) WILD-TYPE"   "AMP PEAK  8(12P13.32) MUTATED" 
                     TCGA-HT-7605                      TCGA-HT-7606 
"AMP PEAK  8(12P13.32) WILD-TYPE" "AMP PEAK  8(12P13.32) WILD-TYPE" 
                     TCGA-HT-7607                      TCGA-HT-7608 
"AMP PEAK  8(12P13.32) WILD-TYPE" "AMP PEAK  8(12P13.32) WILD-TYPE" 
                     TCGA-HT-7609                      TCGA-HT-7610 
"AMP PEAK  8(12P13.32) WILD-TYPE" "AMP PEAK  8(12P13.32) WILD-TYPE" 
                     TCGA-HW-7486                      TCGA-HW-7487 
"AMP PEAK  8(12P13.32) WILD-TYPE" "AMP PEAK  8(12P13.32) WILD-TYPE" 
                     TCGA-HW-7489                      TCGA-HW-7490 
"AMP PEAK  8(12P13.32) WILD-TYPE" "AMP PEAK  8(12P13.32) WILD-TYPE" 
                     TCGA-HW-7491                      TCGA-HW-7493 
"AMP PEAK  8(12P13.32) WILD-TYPE" "AMP PEAK  8(12P13.32) WILD-TYPE" 
                     TCGA-HW-7495                      TCGA-IK-7675 
"AMP PEAK  8(12P13.32) WILD-TYPE" "AMP PEAK  8(12P13.32) WILD-TYPE" 
                     TCGA-IK-8125 
"AMP PEAK  8(12P13.32) WILD-TYPE" 
                     TCGA-CS-4938                      TCGA-CS-4941 
"AMP PEAK  8(12P13.32) WILD-TYPE" "AMP PEAK  8(12P13.32) WILD-TYPE" 
                     TCGA-CS-4942                      TCGA-CS-4943 
"AMP PEAK  8(12P13.32) WILD-TYPE"   "AMP PEAK  8(12P13.32) MUTATED" 
                     TCGA-CS-4944                      TCGA-CS-5390 
"AMP PEAK  8(12P13.32) WILD-TYPE" "AMP PEAK  8(12P13.32) WILD-TYPE" 
                     TCGA-CS-5393                      TCGA-CS-5394 
"AMP PEAK  8(12P13.32) WILD-TYPE" "AMP PEAK  8(12P13.32) WILD-TYPE" 
                     TCGA-CS-5395                      TCGA-CS-5396 
"AMP PEAK  8(12P13.32) WILD-TYPE" "AMP PEAK  8(12P13.32) WILD-TYPE" 
                     TCGA-CS-5397                      TCGA-CS-6186 
"AMP PEAK  8(12P13.32) WILD-TYPE" "AMP PEAK  8(12P13.32) WILD-TYPE" 
                     TCGA-CS-6188                      TCGA-CS-6290 
"AMP PEAK  8(12P13.32) WILD-TYPE" "AMP PEAK  8(12P13.32) WILD-TYPE" 
                     TCGA-CS-6665                      TCGA-CS-6666 
"AMP PEAK  8(12P13.32) WILD-TYPE" "AMP PEAK  8(12P13.32) WILD-TYPE" 
                     TCGA-CS-6667                      TCGA-CS-6668 
"AMP PEAK  8(12P13.32) WILD-TYPE" "AMP PEAK  8(12P13.32) WILD-TYPE" 
                     TCGA-CS-6669                      TCGA-CS-6670 
"AMP PEAK  8(12P13.32) WILD-TYPE" "AMP PEAK  8(12P13.32) WILD-TYPE" 
                     TCGA-DB-5270                      TCGA-DB-5273 
"AMP PEAK  8(12P13.32) WILD-TYPE"   "AMP PEAK  8(12P13.32) MUTATED" 
                     TCGA-DB-5274                      TCGA-DB-5275 
"AMP PEAK  8(12P13.32) WILD-TYPE"   "AMP PEAK  8(12P13.32) MUTATED" 
                     TCGA-DB-5276                      TCGA-DB-5277 
"AMP PEAK  8(12P13.32) WILD-TYPE"   "AMP PEAK  8(12P13.32) MUTATED" 
                     TCGA-DB-5278                      TCGA-DB-5279 
"AMP PEAK  8(12P13.32) WILD-TYPE" "AMP PEAK  8(12P13.32) WILD-TYPE" 
                     TCGA-DB-5280                      TCGA-DB-5281 
"AMP PEAK  8(12P13.32) WILD-TYPE"   "AMP PEAK  8(12P13.32) MUTATED" 
                     TCGA-DH-5140                      TCGA-DH-5141 
"AMP PEAK  8(12P13.32) WILD-TYPE" "AMP PEAK  8(12P13.32) WILD-TYPE" 
                     TCGA-DH-5142                      TCGA-DH-5143 
"AMP PEAK  8(12P13.32) WILD-TYPE" "AMP PEAK  8(12P13.32) WILD-TYPE" 
                     TCGA-DH-5144                      TCGA-DU-5847 
"AMP PEAK  8(12P13.32) WILD-TYPE" "AMP PEAK  8(12P13.32) WILD-TYPE" 
                     TCGA-DU-5849                      TCGA-DU-5851 
"AMP PEAK  8(12P13.32) WILD-TYPE" "AMP PEAK  8(12P13.32) WILD-TYPE" 
                     TCGA-DU-5852                      TCGA-DU-5853 
"AMP PEAK  8(12P13.32) WILD-TYPE" "AMP PEAK  8(12P13.32) WILD-TYPE" 
                     TCGA-DU-5854                      TCGA-DU-5855 
"AMP PEAK  8(12P13.32) WILD-TYPE" "AMP PEAK  8(12P13.32) WILD-TYPE" 
                     TCGA-DU-5870                      TCGA-DU-5871 
"AMP PEAK  8(12P13.32) WILD-TYPE" "AMP PEAK  8(12P13.32) WILD-TYPE" 
                     TCGA-DU-5872                      TCGA-DU-5874 
"AMP PEAK  8(12P13.32) WILD-TYPE" "AMP PEAK  8(12P13.32) WILD-TYPE" 
                     TCGA-DU-6392                      TCGA-DU-6393 
"AMP PEAK  8(12P13.32) WILD-TYPE" "AMP PEAK  8(12P13.32) WILD-TYPE" 
                     TCGA-DU-6394                      TCGA-DU-6395 
"AMP PEAK  8(12P13.32) WILD-TYPE"   "AMP PEAK  8(12P13.32) MUTATED" 
                     TCGA-DU-6396                      TCGA-DU-6397 
  "AMP PEAK  8(12P13.32) MUTATED" "AMP PEAK  8(12P13.32) WILD-TYPE" 
                     TCGA-DU-6399                      TCGA-DU-6400 
  "AMP PEAK  8(12P13.32) MUTATED"   "AMP PEAK  8(12P13.32) MUTATED" 
                     TCGA-DU-6401                      TCGA-DU-6402 
"AMP PEAK  8(12P13.32) WILD-TYPE" "AMP PEAK  8(12P13.32) WILD-TYPE" 
                     TCGA-DU-6403                      TCGA-DU-6404 
  "AMP PEAK  8(12P13.32) MUTATED" "AMP PEAK  8(12P13.32) WILD-TYPE" 
                     TCGA-DU-6405                      TCGA-DU-6406 
"AMP PEAK  8(12P13.32) WILD-TYPE" "AMP PEAK  8(12P13.32) WILD-TYPE" 
                     TCGA-DU-6407                      TCGA-DU-6408 
"AMP PEAK  8(12P13.32) WILD-TYPE"   "AMP PEAK  8(12P13.32) MUTATED" 
                     TCGA-DU-6410                      TCGA-DU-6542 
"AMP PEAK  8(12P13.32) WILD-TYPE" "AMP PEAK  8(12P13.32) WILD-TYPE" 
                     TCGA-DU-7006                      TCGA-DU-7007 
"AMP PEAK  8(12P13.32) WILD-TYPE"   "AMP PEAK  8(12P13.32) MUTATED" 
                     TCGA-DU-7008                      TCGA-DU-7009 
  "AMP PEAK  8(12P13.32) MUTATED" "AMP PEAK  8(12P13.32) WILD-TYPE" 
                     TCGA-DU-7010                      TCGA-DU-7011 
"AMP PEAK  8(12P13.32) WILD-TYPE" "AMP PEAK  8(12P13.32) WILD-TYPE" 
                     TCGA-DU-7012                      TCGA-DU-7013 
"AMP PEAK  8(12P13.32) WILD-TYPE" "AMP PEAK  8(12P13.32) WILD-TYPE" 
                     TCGA-DU-7014                      TCGA-DU-7015 
"AMP PEAK  8(12P13.32) WILD-TYPE" "AMP PEAK  8(12P13.32) WILD-TYPE" 
                     TCGA-DU-7018                      TCGA-DU-7019 
"AMP PEAK  8(12P13.32) WILD-TYPE" "AMP PEAK  8(12P13.32) WILD-TYPE" 
                     TCGA-DU-7290                      TCGA-DU-7292 
"AMP PEAK  8(12P13.32) WILD-TYPE" "AMP PEAK  8(12P13.32) WILD-TYPE" 
                     TCGA-DU-7294                      TCGA-DU-7298 
"AMP PEAK  8(12P13.32) WILD-TYPE" "AMP PEAK  8(12P13.32) WILD-TYPE" 
                     TCGA-DU-7299                      TCGA-DU-7300 
  "AMP PEAK  8(12P13.32) MUTATED" "AMP PEAK  8(12P13.32) WILD-TYPE" 
                     TCGA-DU-7301                      TCGA-DU-7302 
"AMP PEAK  8(12P13.32) WILD-TYPE" "AMP PEAK  8(12P13.32) WILD-TYPE" 
                     TCGA-DU-7304                      TCGA-DU-7306 
  "AMP PEAK  8(12P13.32) MUTATED" "AMP PEAK  8(12P13.32) WILD-TYPE" 
                     TCGA-DU-7309                      TCGA-E1-5302 
"AMP PEAK  8(12P13.32) WILD-TYPE" "AMP PEAK  8(12P13.32) WILD-TYPE" 
                     TCGA-E1-5303                      TCGA-E1-5304 
  "AMP PEAK  8(12P13.32) MUTATED"   "AMP PEAK  8(12P13.32) MUTATED" 
                     TCGA-E1-5305                      TCGA-E1-5307 
"AMP PEAK  8(12P13.32) WILD-TYPE" "AMP PEAK  8(12P13.32) WILD-TYPE" 
                     TCGA-E1-5311                      TCGA-E1-5318 
"AMP PEAK  8(12P13.32) WILD-TYPE" "AMP PEAK  8(12P13.32) WILD-TYPE" 
                     TCGA-E1-5319                      TCGA-E1-5322 
"AMP PEAK  8(12P13.32) WILD-TYPE" "AMP PEAK  8(12P13.32) WILD-TYPE" 
                     TCGA-EZ-7264                      TCGA-FG-5962 
"AMP PEAK  8(12P13.32) WILD-TYPE" "AMP PEAK  8(12P13.32) WILD-TYPE" 
                     TCGA-FG-5963                      TCGA-FG-5964 
"AMP PEAK  8(12P13.32) WILD-TYPE" "AMP PEAK  8(12P13.32) WILD-TYPE" 
                     TCGA-FG-5965                      TCGA-FG-6688 
  "AMP PEAK  8(12P13.32) MUTATED" "AMP PEAK  8(12P13.32) WILD-TYPE" 
                     TCGA-FG-6689                      TCGA-FG-6690 
"AMP PEAK  8(12P13.32) WILD-TYPE"   "AMP PEAK  8(12P13.32) MUTATED" 
                     TCGA-FG-6691                      TCGA-FG-6692 
  "AMP PEAK  8(12P13.32) MUTATED" "AMP PEAK  8(12P13.32) WILD-TYPE" 
                     TCGA-FG-7634                      TCGA-FG-7636 
  "AMP PEAK  8(12P13.32) MUTATED" "AMP PEAK  8(12P13.32) WILD-TYPE" 
                     TCGA-FG-7638                      TCGA-FG-7643 
"AMP PEAK  8(12P13.32) WILD-TYPE" "AMP PEAK  8(12P13.32) WILD-TYPE" 
                     TCGA-FN-7833                      TCGA-HT-7467 
"AMP PEAK  8(12P13.32) WILD-TYPE" "AMP PEAK  8(12P13.32) WILD-TYPE" 
                     TCGA-HT-7468                      TCGA-HT-7470 
"AMP PEAK  8(12P13.32) WILD-TYPE" "AMP PEAK  8(12P13.32) WILD-TYPE" 
                     TCGA-HT-7472                      TCGA-HT-7473 
"AMP PEAK  8(12P13.32) WILD-TYPE"   "AMP PEAK  8(12P13.32) MUTATED" 
                     TCGA-HT-7474                      TCGA-HT-7475 
"AMP PEAK  8(12P13.32) WILD-TYPE" "AMP PEAK  8(12P13.32) WILD-TYPE" 
                     TCGA-HT-7476                      TCGA-HT-7478 
"AMP PEAK  8(12P13.32) WILD-TYPE"   "AMP PEAK  8(12P13.32) MUTATED" 
                     TCGA-HT-7479                      TCGA-HT-7480 
"AMP PEAK  8(12P13.32) WILD-TYPE" "AMP PEAK  8(12P13.32) WILD-TYPE" 
                     TCGA-HT-7481                      TCGA-HT-7482 
"AMP PEAK  8(12P13.32) WILD-TYPE" "AMP PEAK  8(12P13.32) WILD-TYPE" 
                     TCGA-HT-7483                      TCGA-HT-7485 
"AMP PEAK  8(12P13.32) WILD-TYPE" "AMP PEAK  8(12P13.32) WILD-TYPE" 
                     TCGA-HT-7601                      TCGA-HT-7602 
"AMP PEAK  8(12P13.32) WILD-TYPE" "AMP PEAK  8(12P13.32) WILD-TYPE" 
                     TCGA-HT-7603                      TCGA-HT-7604 
"AMP PEAK  8(12P13.32) WILD-TYPE"   "AMP PEAK  8(12P13.32) MUTATED" 
                     TCGA-HT-7605                      TCGA-HT-7606 
"AMP PEAK  8(12P13.32) WILD-TYPE" "AMP PEAK  8(12P13.32) WILD-TYPE" 
                     TCGA-HT-7607                      TCGA-HT-7608 
"AMP PEAK  8(12P13.32) WILD-TYPE" "AMP PEAK  8(12P13.32) WILD-TYPE" 
                     TCGA-HT-7609                      TCGA-HT-7610 
"AMP PEAK  8(12P13.32) WILD-TYPE" "AMP PEAK  8(12P13.32) WILD-TYPE" 
                     TCGA-HW-7486                      TCGA-HW-7487 
"AMP PEAK  8(12P13.32) WILD-TYPE" "AMP PEAK  8(12P13.32) WILD-TYPE" 
                     TCGA-HW-7489                      TCGA-HW-7490 
"AMP PEAK  8(12P13.32) WILD-TYPE" "AMP PEAK  8(12P13.32) WILD-TYPE" 
                     TCGA-HW-7491                      TCGA-HW-7493 
"AMP PEAK  8(12P13.32) WILD-TYPE" "AMP PEAK  8(12P13.32) WILD-TYPE" 
                     TCGA-HW-7495                      TCGA-IK-7675 
"AMP PEAK  8(12P13.32) WILD-TYPE" "AMP PEAK  8(12P13.32) WILD-TYPE" 
                     TCGA-IK-8125 
"AMP PEAK  8(12P13.32) WILD-TYPE" 
                     TCGA-CS-4938                      TCGA-CS-4941 
"AMP PEAK  8(12P13.32) WILD-TYPE" "AMP PEAK  8(12P13.32) WILD-TYPE" 
                     TCGA-CS-4942                      TCGA-CS-4943 
"AMP PEAK  8(12P13.32) WILD-TYPE"   "AMP PEAK  8(12P13.32) MUTATED" 
                     TCGA-CS-4944                      TCGA-CS-5390 
"AMP PEAK  8(12P13.32) WILD-TYPE" "AMP PEAK  8(12P13.32) WILD-TYPE" 
                     TCGA-CS-5393                      TCGA-CS-5394 
"AMP PEAK  8(12P13.32) WILD-TYPE" "AMP PEAK  8(12P13.32) WILD-TYPE" 
                     TCGA-CS-5395                      TCGA-CS-5396 
"AMP PEAK  8(12P13.32) WILD-TYPE" "AMP PEAK  8(12P13.32) WILD-TYPE" 
                     TCGA-CS-5397                      TCGA-CS-6186 
"AMP PEAK  8(12P13.32) WILD-TYPE" "AMP PEAK  8(12P13.32) WILD-TYPE" 
                     TCGA-CS-6188                      TCGA-CS-6290 
"AMP PEAK  8(12P13.32) WILD-TYPE" "AMP PEAK  8(12P13.32) WILD-TYPE" 
                     TCGA-CS-6665                      TCGA-CS-6666 
"AMP PEAK  8(12P13.32) WILD-TYPE" "AMP PEAK  8(12P13.32) WILD-TYPE" 
                     TCGA-CS-6667                      TCGA-CS-6668 
"AMP PEAK  8(12P13.32) WILD-TYPE" "AMP PEAK  8(12P13.32) WILD-TYPE" 
                     TCGA-CS-6669                      TCGA-CS-6670 
"AMP PEAK  8(12P13.32) WILD-TYPE" "AMP PEAK  8(12P13.32) WILD-TYPE" 
                     TCGA-DB-5270                      TCGA-DB-5273 
"AMP PEAK  8(12P13.32) WILD-TYPE"   "AMP PEAK  8(12P13.32) MUTATED" 
                     TCGA-DB-5274                      TCGA-DB-5275 
"AMP PEAK  8(12P13.32) WILD-TYPE"   "AMP PEAK  8(12P13.32) MUTATED" 
                     TCGA-DB-5276                      TCGA-DB-5277 
"AMP PEAK  8(12P13.32) WILD-TYPE"   "AMP PEAK  8(12P13.32) MUTATED" 
                     TCGA-DB-5278                      TCGA-DB-5279 
"AMP PEAK  8(12P13.32) WILD-TYPE" "AMP PEAK  8(12P13.32) WILD-TYPE" 
                     TCGA-DB-5280                      TCGA-DB-5281 
"AMP PEAK  8(12P13.32) WILD-TYPE"   "AMP PEAK  8(12P13.32) MUTATED" 
                     TCGA-DH-5140                      TCGA-DH-5141 
"AMP PEAK  8(12P13.32) WILD-TYPE" "AMP PEAK  8(12P13.32) WILD-TYPE" 
                     TCGA-DH-5142                      TCGA-DH-5143 
"AMP PEAK  8(12P13.32) WILD-TYPE" "AMP PEAK  8(12P13.32) WILD-TYPE" 
                     TCGA-DH-5144                      TCGA-DU-5847 
"AMP PEAK  8(12P13.32) WILD-TYPE" "AMP PEAK  8(12P13.32) WILD-TYPE" 
                     TCGA-DU-5849                      TCGA-DU-5851 
"AMP PEAK  8(12P13.32) WILD-TYPE" "AMP PEAK  8(12P13.32) WILD-TYPE" 
                     TCGA-DU-5852                      TCGA-DU-5853 
"AMP PEAK  8(12P13.32) WILD-TYPE" "AMP PEAK  8(12P13.32) WILD-TYPE" 
                     TCGA-DU-5854                      TCGA-DU-5855 
"AMP PEAK  8(12P13.32) WILD-TYPE" "AMP PEAK  8(12P13.32) WILD-TYPE" 
                     TCGA-DU-5870                      TCGA-DU-5871 
"AMP PEAK  8(12P13.32) WILD-TYPE" "AMP PEAK  8(12P13.32) WILD-TYPE" 
                     TCGA-DU-5872                      TCGA-DU-5874 
"AMP PEAK  8(12P13.32) WILD-TYPE" "AMP PEAK  8(12P13.32) WILD-TYPE" 
                     TCGA-DU-6392                      TCGA-DU-6393 
"AMP PEAK  8(12P13.32) WILD-TYPE" "AMP PEAK  8(12P13.32) WILD-TYPE" 
                     TCGA-DU-6394                      TCGA-DU-6395 
"AMP PEAK  8(12P13.32) WILD-TYPE"   "AMP PEAK  8(12P13.32) MUTATED" 
                     TCGA-DU-6396                      TCGA-DU-6397 
  "AMP PEAK  8(12P13.32) MUTATED" "AMP PEAK  8(12P13.32) WILD-TYPE" 
                     TCGA-DU-6399                      TCGA-DU-6400 
  "AMP PEAK  8(12P13.32) MUTATED"   "AMP PEAK  8(12P13.32) MUTATED" 
                     TCGA-DU-6401                      TCGA-DU-6402 
"AMP PEAK  8(12P13.32) WILD-TYPE" "AMP PEAK  8(12P13.32) WILD-TYPE" 
                     TCGA-DU-6403                      TCGA-DU-6404 
  "AMP PEAK  8(12P13.32) MUTATED" "AMP PEAK  8(12P13.32) WILD-TYPE" 
                     TCGA-DU-6405                      TCGA-DU-6406 
"AMP PEAK  8(12P13.32) WILD-TYPE" "AMP PEAK  8(12P13.32) WILD-TYPE" 
                     TCGA-DU-6407                      TCGA-DU-6408 
"AMP PEAK  8(12P13.32) WILD-TYPE"   "AMP PEAK  8(12P13.32) MUTATED" 
                     TCGA-DU-6410                      TCGA-DU-6542 
"AMP PEAK  8(12P13.32) WILD-TYPE" "AMP PEAK  8(12P13.32) WILD-TYPE" 
                     TCGA-DU-7006                      TCGA-DU-7007 
"AMP PEAK  8(12P13.32) WILD-TYPE"   "AMP PEAK  8(12P13.32) MUTATED" 
                     TCGA-DU-7008                      TCGA-DU-7009 
  "AMP PEAK  8(12P13.32) MUTATED" "AMP PEAK  8(12P13.32) WILD-TYPE" 
                     TCGA-DU-7010                      TCGA-DU-7011 
"AMP PEAK  8(12P13.32) WILD-TYPE" "AMP PEAK  8(12P13.32) WILD-TYPE" 
                     TCGA-DU-7012                      TCGA-DU-7013 
"AMP PEAK  8(12P13.32) WILD-TYPE" "AMP PEAK  8(12P13.32) WILD-TYPE" 
                     TCGA-DU-7014                      TCGA-DU-7015 
"AMP PEAK  8(12P13.32) WILD-TYPE" "AMP PEAK  8(12P13.32) WILD-TYPE" 
                     TCGA-DU-7018                      TCGA-DU-7019 
"AMP PEAK  8(12P13.32) WILD-TYPE" "AMP PEAK  8(12P13.32) WILD-TYPE" 
                     TCGA-DU-7290                      TCGA-DU-7292 
"AMP PEAK  8(12P13.32) WILD-TYPE" "AMP PEAK  8(12P13.32) WILD-TYPE" 
                     TCGA-DU-7294                      TCGA-DU-7298 
"AMP PEAK  8(12P13.32) WILD-TYPE" "AMP PEAK  8(12P13.32) WILD-TYPE" 
                     TCGA-DU-7299                      TCGA-DU-7300 
  "AMP PEAK  8(12P13.32) MUTATED" "AMP PEAK  8(12P13.32) WILD-TYPE" 
                     TCGA-DU-7301                      TCGA-DU-7302 
"AMP PEAK  8(12P13.32) WILD-TYPE" "AMP PEAK  8(12P13.32) WILD-TYPE" 
                     TCGA-DU-7304                      TCGA-DU-7306 
  "AMP PEAK  8(12P13.32) MUTATED" "AMP PEAK  8(12P13.32) WILD-TYPE" 
                     TCGA-DU-7309                      TCGA-E1-5302 
"AMP PEAK  8(12P13.32) WILD-TYPE" "AMP PEAK  8(12P13.32) WILD-TYPE" 
                     TCGA-E1-5303                      TCGA-E1-5304 
  "AMP PEAK  8(12P13.32) MUTATED"   "AMP PEAK  8(12P13.32) MUTATED" 
                     TCGA-E1-5305                      TCGA-E1-5307 
"AMP PEAK  8(12P13.32) WILD-TYPE" "AMP PEAK  8(12P13.32) WILD-TYPE" 
                     TCGA-E1-5311                      TCGA-E1-5318 
"AMP PEAK  8(12P13.32) WILD-TYPE" "AMP PEAK  8(12P13.32) WILD-TYPE" 
                     TCGA-E1-5319                      TCGA-E1-5322 
"AMP PEAK  8(12P13.32) WILD-TYPE" "AMP PEAK  8(12P13.32) WILD-TYPE" 
                     TCGA-EZ-7264                      TCGA-FG-5962 
"AMP PEAK  8(12P13.32) WILD-TYPE" "AMP PEAK  8(12P13.32) WILD-TYPE" 
                     TCGA-FG-5963                      TCGA-FG-5964 
"AMP PEAK  8(12P13.32) WILD-TYPE" "AMP PEAK  8(12P13.32) WILD-TYPE" 
                     TCGA-FG-5965                      TCGA-FG-6688 
  "AMP PEAK  8(12P13.32) MUTATED" "AMP PEAK  8(12P13.32) WILD-TYPE" 
                     TCGA-FG-6689                      TCGA-FG-6690 
"AMP PEAK  8(12P13.32) WILD-TYPE"   "AMP PEAK  8(12P13.32) MUTATED" 
                     TCGA-FG-6691                      TCGA-FG-6692 
  "AMP PEAK  8(12P13.32) MUTATED" "AMP PEAK  8(12P13.32) WILD-TYPE" 
                     TCGA-FG-7634                      TCGA-FG-7636 
  "AMP PEAK  8(12P13.32) MUTATED" "AMP PEAK  8(12P13.32) WILD-TYPE" 
                     TCGA-FG-7638                      TCGA-FG-7643 
"AMP PEAK  8(12P13.32) WILD-TYPE" "AMP PEAK  8(12P13.32) WILD-TYPE" 
                     TCGA-FN-7833                      TCGA-HT-7467 
"AMP PEAK  8(12P13.32) WILD-TYPE" "AMP PEAK  8(12P13.32) WILD-TYPE" 
                     TCGA-HT-7468                      TCGA-HT-7470 
"AMP PEAK  8(12P13.32) WILD-TYPE" "AMP PEAK  8(12P13.32) WILD-TYPE" 
                     TCGA-HT-7472                      TCGA-HT-7473 
"AMP PEAK  8(12P13.32) WILD-TYPE"   "AMP PEAK  8(12P13.32) MUTATED" 
                     TCGA-HT-7474                      TCGA-HT-7475 
"AMP PEAK  8(12P13.32) WILD-TYPE" "AMP PEAK  8(12P13.32) WILD-TYPE" 
                     TCGA-HT-7476                      TCGA-HT-7478 
"AMP PEAK  8(12P13.32) WILD-TYPE"   "AMP PEAK  8(12P13.32) MUTATED" 
                     TCGA-HT-7479                      TCGA-HT-7480 
"AMP PEAK  8(12P13.32) WILD-TYPE" "AMP PEAK  8(12P13.32) WILD-TYPE" 
                     TCGA-HT-7481                      TCGA-HT-7482 
"AMP PEAK  8(12P13.32) WILD-TYPE" "AMP PEAK  8(12P13.32) WILD-TYPE" 
                     TCGA-HT-7483                      TCGA-HT-7485 
"AMP PEAK  8(12P13.32) WILD-TYPE" "AMP PEAK  8(12P13.32) WILD-TYPE" 
                     TCGA-HT-7601                      TCGA-HT-7602 
"AMP PEAK  8(12P13.32) WILD-TYPE" "AMP PEAK  8(12P13.32) WILD-TYPE" 
                     TCGA-HT-7603                      TCGA-HT-7604 
"AMP PEAK  8(12P13.32) WILD-TYPE"   "AMP PEAK  8(12P13.32) MUTATED" 
                     TCGA-HT-7605                      TCGA-HT-7606 
"AMP PEAK  8(12P13.32) WILD-TYPE" "AMP PEAK  8(12P13.32) WILD-TYPE" 
                     TCGA-HT-7607                      TCGA-HT-7608 
"AMP PEAK  8(12P13.32) WILD-TYPE" "AMP PEAK  8(12P13.32) WILD-TYPE" 
                     TCGA-HT-7609                      TCGA-HT-7610 
"AMP PEAK  8(12P13.32) WILD-TYPE" "AMP PEAK  8(12P13.32) WILD-TYPE" 
                     TCGA-HW-7486                      TCGA-HW-7487 
"AMP PEAK  8(12P13.32) WILD-TYPE" "AMP PEAK  8(12P13.32) WILD-TYPE" 
                     TCGA-HW-7489                      TCGA-HW-7490 
"AMP PEAK  8(12P13.32) WILD-TYPE" "AMP PEAK  8(12P13.32) WILD-TYPE" 
                     TCGA-HW-7491                      TCGA-HW-7493 
"AMP PEAK  8(12P13.32) WILD-TYPE" "AMP PEAK  8(12P13.32) WILD-TYPE" 
                     TCGA-HW-7495                      TCGA-IK-7675 
"AMP PEAK  8(12P13.32) WILD-TYPE" "AMP PEAK  8(12P13.32) WILD-TYPE" 
                     TCGA-IK-8125 
"AMP PEAK  8(12P13.32) WILD-TYPE" 
[1] "hr=" "1.1"
D8V2, continuous
D8V3, binary
[1] "tbl2"
                                 cls
clus                              [,1] [,2]
  AMP PEAK  8(12P13.32) MUTATED      7   17
  AMP PEAK  8(12P13.32) WILD-TYPE   55   66
        clus
vv       AMP PEAK  8(12P13.32) MUTATED AMP PEAK  8(12P13.32) WILD-TYPE
  FEMALE                             7                              55
  MALE                              17                              66
D8V4, continuous
D8V5, multiclass
                   clus
vv                  AMP PEAK  8(12P13.32) MUTATED
  ASTROCYTOMA                                  10
  OLIGOASTROCYTOMA                              7
  OLIGODENDROGLIOMA                             7
                   clus
vv                  AMP PEAK  8(12P13.32) WILD-TYPE
  ASTROCYTOMA                                    40
  OLIGOASTROCYTOMA                               29
  OLIGODENDROGLIOMA                              51
D8V6, binary
[1] "tbl2"
                                 cls
clus                              [,1] [,2]
  AMP PEAK  8(12P13.32) MUTATED     10   14
  AMP PEAK  8(12P13.32) WILD-TYPE   49   72
     clus
vv    AMP PEAK  8(12P13.32) MUTATED AMP PEAK  8(12P13.32) WILD-TYPE
  NO                             14                              72
  YES                            10                              49
D8V7, binary
[1] "tbl2"
                                 cls
clus                              [,1] [,2]
  AMP PEAK  8(12P13.32) MUTATED     16    8
  AMP PEAK  8(12P13.32) WILD-TYPE   58   63
     clus
vv    AMP PEAK  8(12P13.32) MUTATED AMP PEAK  8(12P13.32) WILD-TYPE
  NO                              8                              63
  YES                            16                              58

Clustering(9) Variable = Amp Peak  9(12q14.1) mutation analysis
D9V1, survival
                    TCGA-CS-4938                     TCGA-CS-4941 
"AMP PEAK  9(12Q14.1) WILD-TYPE"   "AMP PEAK  9(12Q14.1) MUTATED" 
                    TCGA-CS-4942                     TCGA-CS-4943 
"AMP PEAK  9(12Q14.1) WILD-TYPE" "AMP PEAK  9(12Q14.1) WILD-TYPE" 
                    TCGA-CS-4944                     TCGA-CS-5390 
"AMP PEAK  9(12Q14.1) WILD-TYPE" "AMP PEAK  9(12Q14.1) WILD-TYPE" 
                    TCGA-CS-5393                     TCGA-CS-5394 
"AMP PEAK  9(12Q14.1) WILD-TYPE" "AMP PEAK  9(12Q14.1) WILD-TYPE" 
                    TCGA-CS-5395                     TCGA-CS-5396 
"AMP PEAK  9(12Q14.1) WILD-TYPE" "AMP PEAK  9(12Q14.1) WILD-TYPE" 
                    TCGA-CS-5397                     TCGA-CS-6186 
"AMP PEAK  9(12Q14.1) WILD-TYPE" "AMP PEAK  9(12Q14.1) WILD-TYPE" 
                    TCGA-CS-6188                     TCGA-CS-6290 
"AMP PEAK  9(12Q14.1) WILD-TYPE" "AMP PEAK  9(12Q14.1) WILD-TYPE" 
                    TCGA-CS-6665                     TCGA-CS-6666 
  "AMP PEAK  9(12Q14.1) MUTATED" "AMP PEAK  9(12Q14.1) WILD-TYPE" 
                    TCGA-CS-6667                     TCGA-CS-6668 
"AMP PEAK  9(12Q14.1) WILD-TYPE" "AMP PEAK  9(12Q14.1) WILD-TYPE" 
                    TCGA-CS-6669                     TCGA-CS-6670 
"AMP PEAK  9(12Q14.1) WILD-TYPE" "AMP PEAK  9(12Q14.1) WILD-TYPE" 
                    TCGA-DB-5270                     TCGA-DB-5273 
"AMP PEAK  9(12Q14.1) WILD-TYPE" "AMP PEAK  9(12Q14.1) WILD-TYPE" 
                    TCGA-DB-5274                     TCGA-DB-5275 
"AMP PEAK  9(12Q14.1) WILD-TYPE" "AMP PEAK  9(12Q14.1) WILD-TYPE" 
                    TCGA-DB-5276                     TCGA-DB-5277 
"AMP PEAK  9(12Q14.1) WILD-TYPE" "AMP PEAK  9(12Q14.1) WILD-TYPE" 
                    TCGA-DB-5278                     TCGA-DB-5279 
"AMP PEAK  9(12Q14.1) WILD-TYPE" "AMP PEAK  9(12Q14.1) WILD-TYPE" 
                    TCGA-DB-5280                     TCGA-DB-5281 
"AMP PEAK  9(12Q14.1) WILD-TYPE" "AMP PEAK  9(12Q14.1) WILD-TYPE" 
                    TCGA-DH-5140                     TCGA-DH-5141 
"AMP PEAK  9(12Q14.1) WILD-TYPE" "AMP PEAK  9(12Q14.1) WILD-TYPE" 
                    TCGA-DH-5142                     TCGA-DH-5143 
"AMP PEAK  9(12Q14.1) WILD-TYPE" "AMP PEAK  9(12Q14.1) WILD-TYPE" 
                    TCGA-DH-5144                     TCGA-DU-5847 
"AMP PEAK  9(12Q14.1) WILD-TYPE" "AMP PEAK  9(12Q14.1) WILD-TYPE" 
                    TCGA-DU-5849                     TCGA-DU-5851 
"AMP PEAK  9(12Q14.1) WILD-TYPE" "AMP PEAK  9(12Q14.1) WILD-TYPE" 
                    TCGA-DU-5852                     TCGA-DU-5853 
"AMP PEAK  9(12Q14.1) WILD-TYPE" "AMP PEAK  9(12Q14.1) WILD-TYPE" 
                    TCGA-DU-5854                     TCGA-DU-5855 
"AMP PEAK  9(12Q14.1) WILD-TYPE" "AMP PEAK  9(12Q14.1) WILD-TYPE" 
                    TCGA-DU-5870                     TCGA-DU-5871 
"AMP PEAK  9(12Q14.1) WILD-TYPE" "AMP PEAK  9(12Q14.1) WILD-TYPE" 
                    TCGA-DU-5872                     TCGA-DU-5874 
"AMP PEAK  9(12Q14.1) WILD-TYPE" "AMP PEAK  9(12Q14.1) WILD-TYPE" 
                    TCGA-DU-6392                     TCGA-DU-6393 
"AMP PEAK  9(12Q14.1) WILD-TYPE" "AMP PEAK  9(12Q14.1) WILD-TYPE" 
                    TCGA-DU-6394                     TCGA-DU-6395 
"AMP PEAK  9(12Q14.1) WILD-TYPE" "AMP PEAK  9(12Q14.1) WILD-TYPE" 
                    TCGA-DU-6396                     TCGA-DU-6397 
"AMP PEAK  9(12Q14.1) WILD-TYPE" "AMP PEAK  9(12Q14.1) WILD-TYPE" 
                    TCGA-DU-6399                     TCGA-DU-6400 
"AMP PEAK  9(12Q14.1) WILD-TYPE"   "AMP PEAK  9(12Q14.1) MUTATED" 
                    TCGA-DU-6401                     TCGA-DU-6402 
"AMP PEAK  9(12Q14.1) WILD-TYPE" "AMP PEAK  9(12Q14.1) WILD-TYPE" 
                    TCGA-DU-6403                     TCGA-DU-6404 
  "AMP PEAK  9(12Q14.1) MUTATED" "AMP PEAK  9(12Q14.1) WILD-TYPE" 
                    TCGA-DU-6405                     TCGA-DU-6406 
"AMP PEAK  9(12Q14.1) WILD-TYPE" "AMP PEAK  9(12Q14.1) WILD-TYPE" 
                    TCGA-DU-6407                     TCGA-DU-6408 
"AMP PEAK  9(12Q14.1) WILD-TYPE" "AMP PEAK  9(12Q14.1) WILD-TYPE" 
                    TCGA-DU-6410                     TCGA-DU-6542 
"AMP PEAK  9(12Q14.1) WILD-TYPE" "AMP PEAK  9(12Q14.1) WILD-TYPE" 
                    TCGA-DU-7006                     TCGA-DU-7007 
"AMP PEAK  9(12Q14.1) WILD-TYPE" "AMP PEAK  9(12Q14.1) WILD-TYPE" 
                    TCGA-DU-7008                     TCGA-DU-7009 
"AMP PEAK  9(12Q14.1) WILD-TYPE" "AMP PEAK  9(12Q14.1) WILD-TYPE" 
                    TCGA-DU-7010                     TCGA-DU-7011 
  "AMP PEAK  9(12Q14.1) MUTATED" "AMP PEAK  9(12Q14.1) WILD-TYPE" 
                    TCGA-DU-7012                     TCGA-DU-7013 
"AMP PEAK  9(12Q14.1) WILD-TYPE"   "AMP PEAK  9(12Q14.1) MUTATED" 
                    TCGA-DU-7014                     TCGA-DU-7015 
"AMP PEAK  9(12Q14.1) WILD-TYPE" "AMP PEAK  9(12Q14.1) WILD-TYPE" 
                    TCGA-DU-7018                     TCGA-DU-7019 
"AMP PEAK  9(12Q14.1) WILD-TYPE" "AMP PEAK  9(12Q14.1) WILD-TYPE" 
                    TCGA-DU-7290                     TCGA-DU-7292 
"AMP PEAK  9(12Q14.1) WILD-TYPE" "AMP PEAK  9(12Q14.1) WILD-TYPE" 
                    TCGA-DU-7294                     TCGA-DU-7298 
"AMP PEAK  9(12Q14.1) WILD-TYPE"   "AMP PEAK  9(12Q14.1) MUTATED" 
                    TCGA-DU-7299                     TCGA-DU-7300 
"AMP PEAK  9(12Q14.1) WILD-TYPE" "AMP PEAK  9(12Q14.1) WILD-TYPE" 
                    TCGA-DU-7301                     TCGA-DU-7302 
"AMP PEAK  9(12Q14.1) WILD-TYPE" "AMP PEAK  9(12Q14.1) WILD-TYPE" 
                    TCGA-DU-7304                     TCGA-DU-7306 
"AMP PEAK  9(12Q14.1) WILD-TYPE" "AMP PEAK  9(12Q14.1) WILD-TYPE" 
                    TCGA-DU-7309                     TCGA-E1-5302 
"AMP PEAK  9(12Q14.1) WILD-TYPE" "AMP PEAK  9(12Q14.1) WILD-TYPE" 
                    TCGA-E1-5303                     TCGA-E1-5304 
"AMP PEAK  9(12Q14.1) WILD-TYPE" "AMP PEAK  9(12Q14.1) WILD-TYPE" 
                    TCGA-E1-5305                     TCGA-E1-5307 
  "AMP PEAK  9(12Q14.1) MUTATED" "AMP PEAK  9(12Q14.1) WILD-TYPE" 
                    TCGA-E1-5311                     TCGA-E1-5318 
"AMP PEAK  9(12Q14.1) WILD-TYPE"   "AMP PEAK  9(12Q14.1) MUTATED" 
                    TCGA-E1-5319                     TCGA-E1-5322 
"AMP PEAK  9(12Q14.1) WILD-TYPE" "AMP PEAK  9(12Q14.1) WILD-TYPE" 
                    TCGA-EZ-7264                     TCGA-FG-5962 
"AMP PEAK  9(12Q14.1) WILD-TYPE" "AMP PEAK  9(12Q14.1) WILD-TYPE" 
                    TCGA-FG-5963                     TCGA-FG-5964 
"AMP PEAK  9(12Q14.1) WILD-TYPE" "AMP PEAK  9(12Q14.1) WILD-TYPE" 
                    TCGA-FG-5965                     TCGA-FG-6688 
"AMP PEAK  9(12Q14.1) WILD-TYPE" "AMP PEAK  9(12Q14.1) WILD-TYPE" 
                    TCGA-FG-6689                     TCGA-FG-6690 
"AMP PEAK  9(12Q14.1) WILD-TYPE" "AMP PEAK  9(12Q14.1) WILD-TYPE" 
                    TCGA-FG-6691                     TCGA-FG-6692 
"AMP PEAK  9(12Q14.1) WILD-TYPE" "AMP PEAK  9(12Q14.1) WILD-TYPE" 
                    TCGA-FG-7634                     TCGA-FG-7636 
  "AMP PEAK  9(12Q14.1) MUTATED"   "AMP PEAK  9(12Q14.1) MUTATED" 
                    TCGA-FG-7638                     TCGA-FG-7643 
"AMP PEAK  9(12Q14.1) WILD-TYPE" "AMP PEAK  9(12Q14.1) WILD-TYPE" 
                    TCGA-FN-7833                     TCGA-HT-7467 
"AMP PEAK  9(12Q14.1) WILD-TYPE" "AMP PEAK  9(12Q14.1) WILD-TYPE" 
                    TCGA-HT-7468                     TCGA-HT-7470 
"AMP PEAK  9(12Q14.1) WILD-TYPE" "AMP PEAK  9(12Q14.1) WILD-TYPE" 
                    TCGA-HT-7472                     TCGA-HT-7473 
"AMP PEAK  9(12Q14.1) WILD-TYPE" "AMP PEAK  9(12Q14.1) WILD-TYPE" 
                    TCGA-HT-7474                     TCGA-HT-7475 
"AMP PEAK  9(12Q14.1) WILD-TYPE" "AMP PEAK  9(12Q14.1) WILD-TYPE" 
                    TCGA-HT-7476                     TCGA-HT-7478 
"AMP PEAK  9(12Q14.1) WILD-TYPE" "AMP PEAK  9(12Q14.1) WILD-TYPE" 
                    TCGA-HT-7479                     TCGA-HT-7480 
"AMP PEAK  9(12Q14.1) WILD-TYPE" "AMP PEAK  9(12Q14.1) WILD-TYPE" 
                    TCGA-HT-7481                     TCGA-HT-7482 
"AMP PEAK  9(12Q14.1) WILD-TYPE" "AMP PEAK  9(12Q14.1) WILD-TYPE" 
                    TCGA-HT-7483                     TCGA-HT-7485 
"AMP PEAK  9(12Q14.1) WILD-TYPE" "AMP PEAK  9(12Q14.1) WILD-TYPE" 
                    TCGA-HT-7601                     TCGA-HT-7602 
"AMP PEAK  9(12Q14.1) WILD-TYPE" "AMP PEAK  9(12Q14.1) WILD-TYPE" 
                    TCGA-HT-7603                     TCGA-HT-7604 
"AMP PEAK  9(12Q14.1) WILD-TYPE" "AMP PEAK  9(12Q14.1) WILD-TYPE" 
                    TCGA-HT-7605                     TCGA-HT-7606 
"AMP PEAK  9(12Q14.1) WILD-TYPE" "AMP PEAK  9(12Q14.1) WILD-TYPE" 
                    TCGA-HT-7607                     TCGA-HT-7608 
"AMP PEAK  9(12Q14.1) WILD-TYPE" "AMP PEAK  9(12Q14.1) WILD-TYPE" 
                    TCGA-HT-7609                     TCGA-HT-7610 
"AMP PEAK  9(12Q14.1) WILD-TYPE" "AMP PEAK  9(12Q14.1) WILD-TYPE" 
                    TCGA-HW-7486                     TCGA-HW-7487 
"AMP PEAK  9(12Q14.1) WILD-TYPE" "AMP PEAK  9(12Q14.1) WILD-TYPE" 
                    TCGA-HW-7489                     TCGA-HW-7490 
"AMP PEAK  9(12Q14.1) WILD-TYPE" "AMP PEAK  9(12Q14.1) WILD-TYPE" 
                    TCGA-HW-7491                     TCGA-HW-7493 
"AMP PEAK  9(12Q14.1) WILD-TYPE" "AMP PEAK  9(12Q14.1) WILD-TYPE" 
                    TCGA-HW-7495                     TCGA-IK-7675 
"AMP PEAK  9(12Q14.1) WILD-TYPE"   "AMP PEAK  9(12Q14.1) MUTATED" 
                    TCGA-IK-8125 
"AMP PEAK  9(12Q14.1) WILD-TYPE" 
                    TCGA-CS-4938                     TCGA-CS-4941 
"AMP PEAK  9(12Q14.1) WILD-TYPE"   "AMP PEAK  9(12Q14.1) MUTATED" 
                    TCGA-CS-4942                     TCGA-CS-4943 
"AMP PEAK  9(12Q14.1) WILD-TYPE" "AMP PEAK  9(12Q14.1) WILD-TYPE" 
                    TCGA-CS-4944                     TCGA-CS-5390 
"AMP PEAK  9(12Q14.1) WILD-TYPE" "AMP PEAK  9(12Q14.1) WILD-TYPE" 
                    TCGA-CS-5393                     TCGA-CS-5394 
"AMP PEAK  9(12Q14.1) WILD-TYPE" "AMP PEAK  9(12Q14.1) WILD-TYPE" 
                    TCGA-CS-5395                     TCGA-CS-5396 
"AMP PEAK  9(12Q14.1) WILD-TYPE" "AMP PEAK  9(12Q14.1) WILD-TYPE" 
                    TCGA-CS-5397                     TCGA-CS-6186 
"AMP PEAK  9(12Q14.1) WILD-TYPE" "AMP PEAK  9(12Q14.1) WILD-TYPE" 
                    TCGA-CS-6188                     TCGA-CS-6290 
"AMP PEAK  9(12Q14.1) WILD-TYPE" "AMP PEAK  9(12Q14.1) WILD-TYPE" 
                    TCGA-CS-6665                     TCGA-CS-6666 
  "AMP PEAK  9(12Q14.1) MUTATED" "AMP PEAK  9(12Q14.1) WILD-TYPE" 
                    TCGA-CS-6667                     TCGA-CS-6668 
"AMP PEAK  9(12Q14.1) WILD-TYPE" "AMP PEAK  9(12Q14.1) WILD-TYPE" 
                    TCGA-CS-6669                     TCGA-CS-6670 
"AMP PEAK  9(12Q14.1) WILD-TYPE" "AMP PEAK  9(12Q14.1) WILD-TYPE" 
                    TCGA-DB-5270                     TCGA-DB-5273 
"AMP PEAK  9(12Q14.1) WILD-TYPE" "AMP PEAK  9(12Q14.1) WILD-TYPE" 
                    TCGA-DB-5274                     TCGA-DB-5275 
"AMP PEAK  9(12Q14.1) WILD-TYPE" "AMP PEAK  9(12Q14.1) WILD-TYPE" 
                    TCGA-DB-5276                     TCGA-DB-5277 
"AMP PEAK  9(12Q14.1) WILD-TYPE" "AMP PEAK  9(12Q14.1) WILD-TYPE" 
                    TCGA-DB-5278                     TCGA-DB-5279 
"AMP PEAK  9(12Q14.1) WILD-TYPE" "AMP PEAK  9(12Q14.1) WILD-TYPE" 
                    TCGA-DB-5280                     TCGA-DB-5281 
"AMP PEAK  9(12Q14.1) WILD-TYPE" "AMP PEAK  9(12Q14.1) WILD-TYPE" 
                    TCGA-DH-5140                     TCGA-DH-5141 
"AMP PEAK  9(12Q14.1) WILD-TYPE" "AMP PEAK  9(12Q14.1) WILD-TYPE" 
                    TCGA-DH-5142                     TCGA-DH-5143 
"AMP PEAK  9(12Q14.1) WILD-TYPE" "AMP PEAK  9(12Q14.1) WILD-TYPE" 
                    TCGA-DH-5144                     TCGA-DU-5847 
"AMP PEAK  9(12Q14.1) WILD-TYPE" "AMP PEAK  9(12Q14.1) WILD-TYPE" 
                    TCGA-DU-5849                     TCGA-DU-5851 
"AMP PEAK  9(12Q14.1) WILD-TYPE" "AMP PEAK  9(12Q14.1) WILD-TYPE" 
                    TCGA-DU-5852                     TCGA-DU-5853 
"AMP PEAK  9(12Q14.1) WILD-TYPE" "AMP PEAK  9(12Q14.1) WILD-TYPE" 
                    TCGA-DU-5854                     TCGA-DU-5855 
"AMP PEAK  9(12Q14.1) WILD-TYPE" "AMP PEAK  9(12Q14.1) WILD-TYPE" 
                    TCGA-DU-5870                     TCGA-DU-5871 
"AMP PEAK  9(12Q14.1) WILD-TYPE" "AMP PEAK  9(12Q14.1) WILD-TYPE" 
                    TCGA-DU-5872                     TCGA-DU-5874 
"AMP PEAK  9(12Q14.1) WILD-TYPE" "AMP PEAK  9(12Q14.1) WILD-TYPE" 
                    TCGA-DU-6392                     TCGA-DU-6393 
"AMP PEAK  9(12Q14.1) WILD-TYPE" "AMP PEAK  9(12Q14.1) WILD-TYPE" 
                    TCGA-DU-6394                     TCGA-DU-6395 
"AMP PEAK  9(12Q14.1) WILD-TYPE" "AMP PEAK  9(12Q14.1) WILD-TYPE" 
                    TCGA-DU-6396                     TCGA-DU-6397 
"AMP PEAK  9(12Q14.1) WILD-TYPE" "AMP PEAK  9(12Q14.1) WILD-TYPE" 
                    TCGA-DU-6399                     TCGA-DU-6400 
"AMP PEAK  9(12Q14.1) WILD-TYPE"   "AMP PEAK  9(12Q14.1) MUTATED" 
                    TCGA-DU-6401                     TCGA-DU-6402 
"AMP PEAK  9(12Q14.1) WILD-TYPE" "AMP PEAK  9(12Q14.1) WILD-TYPE" 
                    TCGA-DU-6403                     TCGA-DU-6404 
  "AMP PEAK  9(12Q14.1) MUTATED" "AMP PEAK  9(12Q14.1) WILD-TYPE" 
                    TCGA-DU-6405                     TCGA-DU-6406 
"AMP PEAK  9(12Q14.1) WILD-TYPE" "AMP PEAK  9(12Q14.1) WILD-TYPE" 
                    TCGA-DU-6407                     TCGA-DU-6408 
"AMP PEAK  9(12Q14.1) WILD-TYPE" "AMP PEAK  9(12Q14.1) WILD-TYPE" 
                    TCGA-DU-6410                     TCGA-DU-6542 
"AMP PEAK  9(12Q14.1) WILD-TYPE" "AMP PEAK  9(12Q14.1) WILD-TYPE" 
                    TCGA-DU-7006                     TCGA-DU-7007 
"AMP PEAK  9(12Q14.1) WILD-TYPE" "AMP PEAK  9(12Q14.1) WILD-TYPE" 
                    TCGA-DU-7008                     TCGA-DU-7009 
"AMP PEAK  9(12Q14.1) WILD-TYPE" "AMP PEAK  9(12Q14.1) WILD-TYPE" 
                    TCGA-DU-7010                     TCGA-DU-7011 
  "AMP PEAK  9(12Q14.1) MUTATED" "AMP PEAK  9(12Q14.1) WILD-TYPE" 
                    TCGA-DU-7012                     TCGA-DU-7013 
"AMP PEAK  9(12Q14.1) WILD-TYPE"   "AMP PEAK  9(12Q14.1) MUTATED" 
                    TCGA-DU-7014                     TCGA-DU-7015 
"AMP PEAK  9(12Q14.1) WILD-TYPE" "AMP PEAK  9(12Q14.1) WILD-TYPE" 
                    TCGA-DU-7018                     TCGA-DU-7019 
"AMP PEAK  9(12Q14.1) WILD-TYPE" "AMP PEAK  9(12Q14.1) WILD-TYPE" 
                    TCGA-DU-7290                     TCGA-DU-7292 
"AMP PEAK  9(12Q14.1) WILD-TYPE" "AMP PEAK  9(12Q14.1) WILD-TYPE" 
                    TCGA-DU-7294                     TCGA-DU-7298 
"AMP PEAK  9(12Q14.1) WILD-TYPE"   "AMP PEAK  9(12Q14.1) MUTATED" 
                    TCGA-DU-7299                     TCGA-DU-7300 
"AMP PEAK  9(12Q14.1) WILD-TYPE" "AMP PEAK  9(12Q14.1) WILD-TYPE" 
                    TCGA-DU-7301                     TCGA-DU-7302 
"AMP PEAK  9(12Q14.1) WILD-TYPE" "AMP PEAK  9(12Q14.1) WILD-TYPE" 
                    TCGA-DU-7304                     TCGA-DU-7306 
"AMP PEAK  9(12Q14.1) WILD-TYPE" "AMP PEAK  9(12Q14.1) WILD-TYPE" 
                    TCGA-DU-7309                     TCGA-E1-5302 
"AMP PEAK  9(12Q14.1) WILD-TYPE" "AMP PEAK  9(12Q14.1) WILD-TYPE" 
                    TCGA-E1-5303                     TCGA-E1-5304 
"AMP PEAK  9(12Q14.1) WILD-TYPE" "AMP PEAK  9(12Q14.1) WILD-TYPE" 
                    TCGA-E1-5305                     TCGA-E1-5307 
  "AMP PEAK  9(12Q14.1) MUTATED" "AMP PEAK  9(12Q14.1) WILD-TYPE" 
                    TCGA-E1-5311                     TCGA-E1-5318 
"AMP PEAK  9(12Q14.1) WILD-TYPE"   "AMP PEAK  9(12Q14.1) MUTATED" 
                    TCGA-E1-5319                     TCGA-E1-5322 
"AMP PEAK  9(12Q14.1) WILD-TYPE" "AMP PEAK  9(12Q14.1) WILD-TYPE" 
                    TCGA-EZ-7264                     TCGA-FG-5962 
"AMP PEAK  9(12Q14.1) WILD-TYPE" "AMP PEAK  9(12Q14.1) WILD-TYPE" 
                    TCGA-FG-5963                     TCGA-FG-5964 
"AMP PEAK  9(12Q14.1) WILD-TYPE" "AMP PEAK  9(12Q14.1) WILD-TYPE" 
                    TCGA-FG-5965                     TCGA-FG-6688 
"AMP PEAK  9(12Q14.1) WILD-TYPE" "AMP PEAK  9(12Q14.1) WILD-TYPE" 
                    TCGA-FG-6689                     TCGA-FG-6690 
"AMP PEAK  9(12Q14.1) WILD-TYPE" "AMP PEAK  9(12Q14.1) WILD-TYPE" 
                    TCGA-FG-6691                     TCGA-FG-6692 
"AMP PEAK  9(12Q14.1) WILD-TYPE" "AMP PEAK  9(12Q14.1) WILD-TYPE" 
                    TCGA-FG-7634                     TCGA-FG-7636 
  "AMP PEAK  9(12Q14.1) MUTATED"   "AMP PEAK  9(12Q14.1) MUTATED" 
                    TCGA-FG-7638                     TCGA-FG-7643 
"AMP PEAK  9(12Q14.1) WILD-TYPE" "AMP PEAK  9(12Q14.1) WILD-TYPE" 
                    TCGA-FN-7833                     TCGA-HT-7467 
"AMP PEAK  9(12Q14.1) WILD-TYPE" "AMP PEAK  9(12Q14.1) WILD-TYPE" 
                    TCGA-HT-7468                     TCGA-HT-7470 
"AMP PEAK  9(12Q14.1) WILD-TYPE" "AMP PEAK  9(12Q14.1) WILD-TYPE" 
                    TCGA-HT-7472                     TCGA-HT-7473 
"AMP PEAK  9(12Q14.1) WILD-TYPE" "AMP PEAK  9(12Q14.1) WILD-TYPE" 
                    TCGA-HT-7474                     TCGA-HT-7475 
"AMP PEAK  9(12Q14.1) WILD-TYPE" "AMP PEAK  9(12Q14.1) WILD-TYPE" 
                    TCGA-HT-7476                     TCGA-HT-7478 
"AMP PEAK  9(12Q14.1) WILD-TYPE" "AMP PEAK  9(12Q14.1) WILD-TYPE" 
                    TCGA-HT-7479                     TCGA-HT-7480 
"AMP PEAK  9(12Q14.1) WILD-TYPE" "AMP PEAK  9(12Q14.1) WILD-TYPE" 
                    TCGA-HT-7481                     TCGA-HT-7482 
"AMP PEAK  9(12Q14.1) WILD-TYPE" "AMP PEAK  9(12Q14.1) WILD-TYPE" 
                    TCGA-HT-7483                     TCGA-HT-7485 
"AMP PEAK  9(12Q14.1) WILD-TYPE" "AMP PEAK  9(12Q14.1) WILD-TYPE" 
                    TCGA-HT-7601                     TCGA-HT-7602 
"AMP PEAK  9(12Q14.1) WILD-TYPE" "AMP PEAK  9(12Q14.1) WILD-TYPE" 
                    TCGA-HT-7603                     TCGA-HT-7604 
"AMP PEAK  9(12Q14.1) WILD-TYPE" "AMP PEAK  9(12Q14.1) WILD-TYPE" 
                    TCGA-HT-7605                     TCGA-HT-7606 
"AMP PEAK  9(12Q14.1) WILD-TYPE" "AMP PEAK  9(12Q14.1) WILD-TYPE" 
                    TCGA-HT-7607                     TCGA-HT-7608 
"AMP PEAK  9(12Q14.1) WILD-TYPE" "AMP PEAK  9(12Q14.1) WILD-TYPE" 
                    TCGA-HT-7609                     TCGA-HT-7610 
"AMP PEAK  9(12Q14.1) WILD-TYPE" "AMP PEAK  9(12Q14.1) WILD-TYPE" 
                    TCGA-HW-7486                     TCGA-HW-7487 
"AMP PEAK  9(12Q14.1) WILD-TYPE" "AMP PEAK  9(12Q14.1) WILD-TYPE" 
                    TCGA-HW-7489                     TCGA-HW-7490 
"AMP PEAK  9(12Q14.1) WILD-TYPE" "AMP PEAK  9(12Q14.1) WILD-TYPE" 
                    TCGA-HW-7491                     TCGA-HW-7493 
"AMP PEAK  9(12Q14.1) WILD-TYPE" "AMP PEAK  9(12Q14.1) WILD-TYPE" 
                    TCGA-HW-7495                     TCGA-IK-7675 
"AMP PEAK  9(12Q14.1) WILD-TYPE"   "AMP PEAK  9(12Q14.1) MUTATED" 
                    TCGA-IK-8125 
"AMP PEAK  9(12Q14.1) WILD-TYPE" 
                    TCGA-CS-4938                     TCGA-CS-4941 
"AMP PEAK  9(12Q14.1) WILD-TYPE"   "AMP PEAK  9(12Q14.1) MUTATED" 
                    TCGA-CS-4942                     TCGA-CS-4943 
"AMP PEAK  9(12Q14.1) WILD-TYPE" "AMP PEAK  9(12Q14.1) WILD-TYPE" 
                    TCGA-CS-4944                     TCGA-CS-5390 
"AMP PEAK  9(12Q14.1) WILD-TYPE" "AMP PEAK  9(12Q14.1) WILD-TYPE" 
                    TCGA-CS-5393                     TCGA-CS-5394 
"AMP PEAK  9(12Q14.1) WILD-TYPE" "AMP PEAK  9(12Q14.1) WILD-TYPE" 
                    TCGA-CS-5395                     TCGA-CS-5396 
"AMP PEAK  9(12Q14.1) WILD-TYPE" "AMP PEAK  9(12Q14.1) WILD-TYPE" 
                    TCGA-CS-5397                     TCGA-CS-6186 
"AMP PEAK  9(12Q14.1) WILD-TYPE" "AMP PEAK  9(12Q14.1) WILD-TYPE" 
                    TCGA-CS-6188                     TCGA-CS-6290 
"AMP PEAK  9(12Q14.1) WILD-TYPE" "AMP PEAK  9(12Q14.1) WILD-TYPE" 
                    TCGA-CS-6665                     TCGA-CS-6666 
  "AMP PEAK  9(12Q14.1) MUTATED" "AMP PEAK  9(12Q14.1) WILD-TYPE" 
                    TCGA-CS-6667                     TCGA-CS-6668 
"AMP PEAK  9(12Q14.1) WILD-TYPE" "AMP PEAK  9(12Q14.1) WILD-TYPE" 
                    TCGA-CS-6669                     TCGA-CS-6670 
"AMP PEAK  9(12Q14.1) WILD-TYPE" "AMP PEAK  9(12Q14.1) WILD-TYPE" 
                    TCGA-DB-5270                     TCGA-DB-5273 
"AMP PEAK  9(12Q14.1) WILD-TYPE" "AMP PEAK  9(12Q14.1) WILD-TYPE" 
                    TCGA-DB-5274                     TCGA-DB-5275 
"AMP PEAK  9(12Q14.1) WILD-TYPE" "AMP PEAK  9(12Q14.1) WILD-TYPE" 
                    TCGA-DB-5276                     TCGA-DB-5277 
"AMP PEAK  9(12Q14.1) WILD-TYPE" "AMP PEAK  9(12Q14.1) WILD-TYPE" 
                    TCGA-DB-5278                     TCGA-DB-5279 
"AMP PEAK  9(12Q14.1) WILD-TYPE" "AMP PEAK  9(12Q14.1) WILD-TYPE" 
                    TCGA-DB-5280                     TCGA-DB-5281 
"AMP PEAK  9(12Q14.1) WILD-TYPE" "AMP PEAK  9(12Q14.1) WILD-TYPE" 
                    TCGA-DH-5140                     TCGA-DH-5141 
"AMP PEAK  9(12Q14.1) WILD-TYPE" "AMP PEAK  9(12Q14.1) WILD-TYPE" 
                    TCGA-DH-5142                     TCGA-DH-5143 
"AMP PEAK  9(12Q14.1) WILD-TYPE" "AMP PEAK  9(12Q14.1) WILD-TYPE" 
                    TCGA-DH-5144                     TCGA-DU-5847 
"AMP PEAK  9(12Q14.1) WILD-TYPE" "AMP PEAK  9(12Q14.1) WILD-TYPE" 
                    TCGA-DU-5849                     TCGA-DU-5851 
"AMP PEAK  9(12Q14.1) WILD-TYPE" "AMP PEAK  9(12Q14.1) WILD-TYPE" 
                    TCGA-DU-5852                     TCGA-DU-5853 
"AMP PEAK  9(12Q14.1) WILD-TYPE" "AMP PEAK  9(12Q14.1) WILD-TYPE" 
                    TCGA-DU-5854                     TCGA-DU-5855 
"AMP PEAK  9(12Q14.1) WILD-TYPE" "AMP PEAK  9(12Q14.1) WILD-TYPE" 
                    TCGA-DU-5870                     TCGA-DU-5871 
"AMP PEAK  9(12Q14.1) WILD-TYPE" "AMP PEAK  9(12Q14.1) WILD-TYPE" 
                    TCGA-DU-5872                     TCGA-DU-5874 
"AMP PEAK  9(12Q14.1) WILD-TYPE" "AMP PEAK  9(12Q14.1) WILD-TYPE" 
                    TCGA-DU-6392                     TCGA-DU-6393 
"AMP PEAK  9(12Q14.1) WILD-TYPE" "AMP PEAK  9(12Q14.1) WILD-TYPE" 
                    TCGA-DU-6394                     TCGA-DU-6395 
"AMP PEAK  9(12Q14.1) WILD-TYPE" "AMP PEAK  9(12Q14.1) WILD-TYPE" 
                    TCGA-DU-6396                     TCGA-DU-6397 
"AMP PEAK  9(12Q14.1) WILD-TYPE" "AMP PEAK  9(12Q14.1) WILD-TYPE" 
                    TCGA-DU-6399                     TCGA-DU-6400 
"AMP PEAK  9(12Q14.1) WILD-TYPE"   "AMP PEAK  9(12Q14.1) MUTATED" 
                    TCGA-DU-6401                     TCGA-DU-6402 
"AMP PEAK  9(12Q14.1) WILD-TYPE" "AMP PEAK  9(12Q14.1) WILD-TYPE" 
                    TCGA-DU-6403                     TCGA-DU-6404 
  "AMP PEAK  9(12Q14.1) MUTATED" "AMP PEAK  9(12Q14.1) WILD-TYPE" 
                    TCGA-DU-6405                     TCGA-DU-6406 
"AMP PEAK  9(12Q14.1) WILD-TYPE" "AMP PEAK  9(12Q14.1) WILD-TYPE" 
                    TCGA-DU-6407                     TCGA-DU-6408 
"AMP PEAK  9(12Q14.1) WILD-TYPE" "AMP PEAK  9(12Q14.1) WILD-TYPE" 
                    TCGA-DU-6410                     TCGA-DU-6542 
"AMP PEAK  9(12Q14.1) WILD-TYPE" "AMP PEAK  9(12Q14.1) WILD-TYPE" 
                    TCGA-DU-7006                     TCGA-DU-7007 
"AMP PEAK  9(12Q14.1) WILD-TYPE" "AMP PEAK  9(12Q14.1) WILD-TYPE" 
                    TCGA-DU-7008                     TCGA-DU-7009 
"AMP PEAK  9(12Q14.1) WILD-TYPE" "AMP PEAK  9(12Q14.1) WILD-TYPE" 
                    TCGA-DU-7010                     TCGA-DU-7011 
  "AMP PEAK  9(12Q14.1) MUTATED" "AMP PEAK  9(12Q14.1) WILD-TYPE" 
                    TCGA-DU-7012                     TCGA-DU-7013 
"AMP PEAK  9(12Q14.1) WILD-TYPE"   "AMP PEAK  9(12Q14.1) MUTATED" 
                    TCGA-DU-7014                     TCGA-DU-7015 
"AMP PEAK  9(12Q14.1) WILD-TYPE" "AMP PEAK  9(12Q14.1) WILD-TYPE" 
                    TCGA-DU-7018                     TCGA-DU-7019 
"AMP PEAK  9(12Q14.1) WILD-TYPE" "AMP PEAK  9(12Q14.1) WILD-TYPE" 
                    TCGA-DU-7290                     TCGA-DU-7292 
"AMP PEAK  9(12Q14.1) WILD-TYPE" "AMP PEAK  9(12Q14.1) WILD-TYPE" 
                    TCGA-DU-7294                     TCGA-DU-7298 
"AMP PEAK  9(12Q14.1) WILD-TYPE"   "AMP PEAK  9(12Q14.1) MUTATED" 
                    TCGA-DU-7299                     TCGA-DU-7300 
"AMP PEAK  9(12Q14.1) WILD-TYPE" "AMP PEAK  9(12Q14.1) WILD-TYPE" 
                    TCGA-DU-7301                     TCGA-DU-7302 
"AMP PEAK  9(12Q14.1) WILD-TYPE" "AMP PEAK  9(12Q14.1) WILD-TYPE" 
                    TCGA-DU-7304                     TCGA-DU-7306 
"AMP PEAK  9(12Q14.1) WILD-TYPE" "AMP PEAK  9(12Q14.1) WILD-TYPE" 
                    TCGA-DU-7309                     TCGA-E1-5302 
"AMP PEAK  9(12Q14.1) WILD-TYPE" "AMP PEAK  9(12Q14.1) WILD-TYPE" 
                    TCGA-E1-5303                     TCGA-E1-5304 
"AMP PEAK  9(12Q14.1) WILD-TYPE" "AMP PEAK  9(12Q14.1) WILD-TYPE" 
                    TCGA-E1-5305                     TCGA-E1-5307 
  "AMP PEAK  9(12Q14.1) MUTATED" "AMP PEAK  9(12Q14.1) WILD-TYPE" 
                    TCGA-E1-5311                     TCGA-E1-5318 
"AMP PEAK  9(12Q14.1) WILD-TYPE"   "AMP PEAK  9(12Q14.1) MUTATED" 
                    TCGA-E1-5319                     TCGA-E1-5322 
"AMP PEAK  9(12Q14.1) WILD-TYPE" "AMP PEAK  9(12Q14.1) WILD-TYPE" 
                    TCGA-EZ-7264                     TCGA-FG-5962 
"AMP PEAK  9(12Q14.1) WILD-TYPE" "AMP PEAK  9(12Q14.1) WILD-TYPE" 
                    TCGA-FG-5963                     TCGA-FG-5964 
"AMP PEAK  9(12Q14.1) WILD-TYPE" "AMP PEAK  9(12Q14.1) WILD-TYPE" 
                    TCGA-FG-5965                     TCGA-FG-6688 
"AMP PEAK  9(12Q14.1) WILD-TYPE" "AMP PEAK  9(12Q14.1) WILD-TYPE" 
                    TCGA-FG-6689                     TCGA-FG-6690 
"AMP PEAK  9(12Q14.1) WILD-TYPE" "AMP PEAK  9(12Q14.1) WILD-TYPE" 
                    TCGA-FG-6691                     TCGA-FG-6692 
"AMP PEAK  9(12Q14.1) WILD-TYPE" "AMP PEAK  9(12Q14.1) WILD-TYPE" 
                    TCGA-FG-7634                     TCGA-FG-7636 
  "AMP PEAK  9(12Q14.1) MUTATED"   "AMP PEAK  9(12Q14.1) MUTATED" 
                    TCGA-FG-7638                     TCGA-FG-7643 
"AMP PEAK  9(12Q14.1) WILD-TYPE" "AMP PEAK  9(12Q14.1) WILD-TYPE" 
                    TCGA-FN-7833                     TCGA-HT-7467 
"AMP PEAK  9(12Q14.1) WILD-TYPE" "AMP PEAK  9(12Q14.1) WILD-TYPE" 
                    TCGA-HT-7468                     TCGA-HT-7470 
"AMP PEAK  9(12Q14.1) WILD-TYPE" "AMP PEAK  9(12Q14.1) WILD-TYPE" 
                    TCGA-HT-7472                     TCGA-HT-7473 
"AMP PEAK  9(12Q14.1) WILD-TYPE" "AMP PEAK  9(12Q14.1) WILD-TYPE" 
                    TCGA-HT-7474                     TCGA-HT-7475 
"AMP PEAK  9(12Q14.1) WILD-TYPE" "AMP PEAK  9(12Q14.1) WILD-TYPE" 
                    TCGA-HT-7476                     TCGA-HT-7478 
"AMP PEAK  9(12Q14.1) WILD-TYPE" "AMP PEAK  9(12Q14.1) WILD-TYPE" 
                    TCGA-HT-7479                     TCGA-HT-7480 
"AMP PEAK  9(12Q14.1) WILD-TYPE" "AMP PEAK  9(12Q14.1) WILD-TYPE" 
                    TCGA-HT-7481                     TCGA-HT-7482 
"AMP PEAK  9(12Q14.1) WILD-TYPE" "AMP PEAK  9(12Q14.1) WILD-TYPE" 
                    TCGA-HT-7483                     TCGA-HT-7485 
"AMP PEAK  9(12Q14.1) WILD-TYPE" "AMP PEAK  9(12Q14.1) WILD-TYPE" 
                    TCGA-HT-7601                     TCGA-HT-7602 
"AMP PEAK  9(12Q14.1) WILD-TYPE" "AMP PEAK  9(12Q14.1) WILD-TYPE" 
                    TCGA-HT-7603                     TCGA-HT-7604 
"AMP PEAK  9(12Q14.1) WILD-TYPE" "AMP PEAK  9(12Q14.1) WILD-TYPE" 
                    TCGA-HT-7605                     TCGA-HT-7606 
"AMP PEAK  9(12Q14.1) WILD-TYPE" "AMP PEAK  9(12Q14.1) WILD-TYPE" 
                    TCGA-HT-7607                     TCGA-HT-7608 
"AMP PEAK  9(12Q14.1) WILD-TYPE" "AMP PEAK  9(12Q14.1) WILD-TYPE" 
                    TCGA-HT-7609                     TCGA-HT-7610 
"AMP PEAK  9(12Q14.1) WILD-TYPE" "AMP PEAK  9(12Q14.1) WILD-TYPE" 
                    TCGA-HW-7486                     TCGA-HW-7487 
"AMP PEAK  9(12Q14.1) WILD-TYPE" "AMP PEAK  9(12Q14.1) WILD-TYPE" 
                    TCGA-HW-7489                     TCGA-HW-7490 
"AMP PEAK  9(12Q14.1) WILD-TYPE" "AMP PEAK  9(12Q14.1) WILD-TYPE" 
                    TCGA-HW-7491                     TCGA-HW-7493 
"AMP PEAK  9(12Q14.1) WILD-TYPE" "AMP PEAK  9(12Q14.1) WILD-TYPE" 
                    TCGA-HW-7495                     TCGA-IK-7675 
"AMP PEAK  9(12Q14.1) WILD-TYPE"   "AMP PEAK  9(12Q14.1) MUTATED" 
                    TCGA-IK-8125 
"AMP PEAK  9(12Q14.1) WILD-TYPE" 
[1] "hr=" "4.5"
D9V2, continuous
D9V3, binary
[1] "tbl2"
                                cls
clus                             [,1] [,2]
  AMP PEAK  9(12Q14.1) MUTATED      6    6
  AMP PEAK  9(12Q14.1) WILD-TYPE   56   77
        clus
vv       AMP PEAK  9(12Q14.1) MUTATED AMP PEAK  9(12Q14.1) WILD-TYPE
  FEMALE                            6                             56
  MALE                              6                             77
D9V4, continuous
D9V5, multiclass
                   clus
vv                  AMP PEAK  9(12Q14.1) MUTATED AMP PEAK  9(12Q14.1) WILD-TYPE
  ASTROCYTOMA                                  7                             43
  OLIGOASTROCYTOMA                             1                             35
  OLIGODENDROGLIOMA                            4                             54
D9V6, binary
[1] "tbl2"
                                cls
clus                             [,1] [,2]
  AMP PEAK  9(12Q14.1) MUTATED      4    8
  AMP PEAK  9(12Q14.1) WILD-TYPE   55   78
     clus
vv    AMP PEAK  9(12Q14.1) MUTATED AMP PEAK  9(12Q14.1) WILD-TYPE
  NO                             8                             78
  YES                            4                             55
D9V7, binary
[1] "tbl2"
                                cls
clus                             [,1] [,2]
  AMP PEAK  9(12Q14.1) MUTATED      4    8
  AMP PEAK  9(12Q14.1) WILD-TYPE   70   63
     clus
vv    AMP PEAK  9(12Q14.1) MUTATED AMP PEAK  9(12Q14.1) WILD-TYPE
  NO                             8                             63
  YES                            4                             70

Clustering(10) Variable = Amp Peak 10(17q24.3) mutation analysis
D10V1, survival
                    TCGA-CS-4938                     TCGA-CS-4941 
"AMP PEAK 10(17Q24.3) WILD-TYPE" "AMP PEAK 10(17Q24.3) WILD-TYPE" 
                    TCGA-CS-4942                     TCGA-CS-4943 
"AMP PEAK 10(17Q24.3) WILD-TYPE" "AMP PEAK 10(17Q24.3) WILD-TYPE" 
                    TCGA-CS-4944                     TCGA-CS-5390 
"AMP PEAK 10(17Q24.3) WILD-TYPE" "AMP PEAK 10(17Q24.3) WILD-TYPE" 
                    TCGA-CS-5393                     TCGA-CS-5394 
"AMP PEAK 10(17Q24.3) WILD-TYPE" "AMP PEAK 10(17Q24.3) WILD-TYPE" 
                    TCGA-CS-5395                     TCGA-CS-5396 
"AMP PEAK 10(17Q24.3) WILD-TYPE" "AMP PEAK 10(17Q24.3) WILD-TYPE" 
                    TCGA-CS-5397                     TCGA-CS-6186 
"AMP PEAK 10(17Q24.3) WILD-TYPE" "AMP PEAK 10(17Q24.3) WILD-TYPE" 
                    TCGA-CS-6188                     TCGA-CS-6290 
"AMP PEAK 10(17Q24.3) WILD-TYPE" "AMP PEAK 10(17Q24.3) WILD-TYPE" 
                    TCGA-CS-6665                     TCGA-CS-6666 
  "AMP PEAK 10(17Q24.3) MUTATED" "AMP PEAK 10(17Q24.3) WILD-TYPE" 
                    TCGA-CS-6667                     TCGA-CS-6668 
"AMP PEAK 10(17Q24.3) WILD-TYPE" "AMP PEAK 10(17Q24.3) WILD-TYPE" 
                    TCGA-CS-6669                     TCGA-CS-6670 
"AMP PEAK 10(17Q24.3) WILD-TYPE" "AMP PEAK 10(17Q24.3) WILD-TYPE" 
                    TCGA-DB-5270                     TCGA-DB-5273 
"AMP PEAK 10(17Q24.3) WILD-TYPE" "AMP PEAK 10(17Q24.3) WILD-TYPE" 
                    TCGA-DB-5274                     TCGA-DB-5275 
"AMP PEAK 10(17Q24.3) WILD-TYPE" "AMP PEAK 10(17Q24.3) WILD-TYPE" 
                    TCGA-DB-5276                     TCGA-DB-5277 
"AMP PEAK 10(17Q24.3) WILD-TYPE" "AMP PEAK 10(17Q24.3) WILD-TYPE" 
                    TCGA-DB-5278                     TCGA-DB-5279 
"AMP PEAK 10(17Q24.3) WILD-TYPE" "AMP PEAK 10(17Q24.3) WILD-TYPE" 
                    TCGA-DB-5280                     TCGA-DB-5281 
"AMP PEAK 10(17Q24.3) WILD-TYPE" "AMP PEAK 10(17Q24.3) WILD-TYPE" 
                    TCGA-DH-5140                     TCGA-DH-5141 
  "AMP PEAK 10(17Q24.3) MUTATED" "AMP PEAK 10(17Q24.3) WILD-TYPE" 
                    TCGA-DH-5142                     TCGA-DH-5143 
"AMP PEAK 10(17Q24.3) WILD-TYPE" "AMP PEAK 10(17Q24.3) WILD-TYPE" 
                    TCGA-DH-5144                     TCGA-DU-5847 
"AMP PEAK 10(17Q24.3) WILD-TYPE" "AMP PEAK 10(17Q24.3) WILD-TYPE" 
                    TCGA-DU-5849                     TCGA-DU-5851 
"AMP PEAK 10(17Q24.3) WILD-TYPE" "AMP PEAK 10(17Q24.3) WILD-TYPE" 
                    TCGA-DU-5852                     TCGA-DU-5853 
"AMP PEAK 10(17Q24.3) WILD-TYPE" "AMP PEAK 10(17Q24.3) WILD-TYPE" 
                    TCGA-DU-5854                     TCGA-DU-5855 
"AMP PEAK 10(17Q24.3) WILD-TYPE" "AMP PEAK 10(17Q24.3) WILD-TYPE" 
                    TCGA-DU-5870                     TCGA-DU-5871 
"AMP PEAK 10(17Q24.3) WILD-TYPE" "AMP PEAK 10(17Q24.3) WILD-TYPE" 
                    TCGA-DU-5872                     TCGA-DU-5874 
"AMP PEAK 10(17Q24.3) WILD-TYPE" "AMP PEAK 10(17Q24.3) WILD-TYPE" 
                    TCGA-DU-6392                     TCGA-DU-6393 
"AMP PEAK 10(17Q24.3) WILD-TYPE" "AMP PEAK 10(17Q24.3) WILD-TYPE" 
                    TCGA-DU-6394                     TCGA-DU-6395 
"AMP PEAK 10(17Q24.3) WILD-TYPE" "AMP PEAK 10(17Q24.3) WILD-TYPE" 
                    TCGA-DU-6396                     TCGA-DU-6397 
"AMP PEAK 10(17Q24.3) WILD-TYPE" "AMP PEAK 10(17Q24.3) WILD-TYPE" 
                    TCGA-DU-6399                     TCGA-DU-6400 
  "AMP PEAK 10(17Q24.3) MUTATED" "AMP PEAK 10(17Q24.3) WILD-TYPE" 
                    TCGA-DU-6401                     TCGA-DU-6402 
"AMP PEAK 10(17Q24.3) WILD-TYPE" "AMP PEAK 10(17Q24.3) WILD-TYPE" 
                    TCGA-DU-6403                     TCGA-DU-6404 
"AMP PEAK 10(17Q24.3) WILD-TYPE" "AMP PEAK 10(17Q24.3) WILD-TYPE" 
                    TCGA-DU-6405                     TCGA-DU-6406 
"AMP PEAK 10(17Q24.3) WILD-TYPE" "AMP PEAK 10(17Q24.3) WILD-TYPE" 
                    TCGA-DU-6407                     TCGA-DU-6408 
"AMP PEAK 10(17Q24.3) WILD-TYPE" "AMP PEAK 10(17Q24.3) WILD-TYPE" 
                    TCGA-DU-6410                     TCGA-DU-6542 
"AMP PEAK 10(17Q24.3) WILD-TYPE" "AMP PEAK 10(17Q24.3) WILD-TYPE" 
                    TCGA-DU-7006                     TCGA-DU-7007 
"AMP PEAK 10(17Q24.3) WILD-TYPE" "AMP PEAK 10(17Q24.3) WILD-TYPE" 
                    TCGA-DU-7008                     TCGA-DU-7009 
"AMP PEAK 10(17Q24.3) WILD-TYPE" "AMP PEAK 10(17Q24.3) WILD-TYPE" 
                    TCGA-DU-7010                     TCGA-DU-7011 
  "AMP PEAK 10(17Q24.3) MUTATED" "AMP PEAK 10(17Q24.3) WILD-TYPE" 
                    TCGA-DU-7012                     TCGA-DU-7013 
"AMP PEAK 10(17Q24.3) WILD-TYPE"   "AMP PEAK 10(17Q24.3) MUTATED" 
                    TCGA-DU-7014                     TCGA-DU-7015 
"AMP PEAK 10(17Q24.3) WILD-TYPE" "AMP PEAK 10(17Q24.3) WILD-TYPE" 
                    TCGA-DU-7018                     TCGA-DU-7019 
"AMP PEAK 10(17Q24.3) WILD-TYPE" "AMP PEAK 10(17Q24.3) WILD-TYPE" 
                    TCGA-DU-7290                     TCGA-DU-7292 
"AMP PEAK 10(17Q24.3) WILD-TYPE" "AMP PEAK 10(17Q24.3) WILD-TYPE" 
                    TCGA-DU-7294                     TCGA-DU-7298 
"AMP PEAK 10(17Q24.3) WILD-TYPE" "AMP PEAK 10(17Q24.3) WILD-TYPE" 
                    TCGA-DU-7299                     TCGA-DU-7300 
"AMP PEAK 10(17Q24.3) WILD-TYPE" "AMP PEAK 10(17Q24.3) WILD-TYPE" 
                    TCGA-DU-7301                     TCGA-DU-7302 
"AMP PEAK 10(17Q24.3) WILD-TYPE" "AMP PEAK 10(17Q24.3) WILD-TYPE" 
                    TCGA-DU-7304                     TCGA-DU-7306 
  "AMP PEAK 10(17Q24.3) MUTATED" "AMP PEAK 10(17Q24.3) WILD-TYPE" 
                    TCGA-DU-7309                     TCGA-E1-5302 
"AMP PEAK 10(17Q24.3) WILD-TYPE" "AMP PEAK 10(17Q24.3) WILD-TYPE" 
                    TCGA-E1-5303                     TCGA-E1-5304 
"AMP PEAK 10(17Q24.3) WILD-TYPE"   "AMP PEAK 10(17Q24.3) MUTATED" 
                    TCGA-E1-5305                     TCGA-E1-5307 
"AMP PEAK 10(17Q24.3) WILD-TYPE" "AMP PEAK 10(17Q24.3) WILD-TYPE" 
                    TCGA-E1-5311                     TCGA-E1-5318 
"AMP PEAK 10(17Q24.3) WILD-TYPE"   "AMP PEAK 10(17Q24.3) MUTATED" 
                    TCGA-E1-5319                     TCGA-E1-5322 
"AMP PEAK 10(17Q24.3) WILD-TYPE" "AMP PEAK 10(17Q24.3) WILD-TYPE" 
                    TCGA-EZ-7264                     TCGA-FG-5962 
"AMP PEAK 10(17Q24.3) WILD-TYPE"   "AMP PEAK 10(17Q24.3) MUTATED" 
                    TCGA-FG-5963                     TCGA-FG-5964 
"AMP PEAK 10(17Q24.3) WILD-TYPE" "AMP PEAK 10(17Q24.3) WILD-TYPE" 
                    TCGA-FG-5965                     TCGA-FG-6688 
"AMP PEAK 10(17Q24.3) WILD-TYPE" "AMP PEAK 10(17Q24.3) WILD-TYPE" 
                    TCGA-FG-6689                     TCGA-FG-6690 
"AMP PEAK 10(17Q24.3) WILD-TYPE" "AMP PEAK 10(17Q24.3) WILD-TYPE" 
                    TCGA-FG-6691                     TCGA-FG-6692 
"AMP PEAK 10(17Q24.3) WILD-TYPE" "AMP PEAK 10(17Q24.3) WILD-TYPE" 
                    TCGA-FG-7634                     TCGA-FG-7636 
  "AMP PEAK 10(17Q24.3) MUTATED" "AMP PEAK 10(17Q24.3) WILD-TYPE" 
                    TCGA-FG-7638                     TCGA-FG-7643 
"AMP PEAK 10(17Q24.3) WILD-TYPE" "AMP PEAK 10(17Q24.3) WILD-TYPE" 
                    TCGA-FN-7833                     TCGA-HT-7467 
"AMP PEAK 10(17Q24.3) WILD-TYPE" "AMP PEAK 10(17Q24.3) WILD-TYPE" 
                    TCGA-HT-7468                     TCGA-HT-7470 
"AMP PEAK 10(17Q24.3) WILD-TYPE" "AMP PEAK 10(17Q24.3) WILD-TYPE" 
                    TCGA-HT-7472                     TCGA-HT-7473 
"AMP PEAK 10(17Q24.3) WILD-TYPE" "AMP PEAK 10(17Q24.3) WILD-TYPE" 
                    TCGA-HT-7474                     TCGA-HT-7475 
"AMP PEAK 10(17Q24.3) WILD-TYPE" "AMP PEAK 10(17Q24.3) WILD-TYPE" 
                    TCGA-HT-7476                     TCGA-HT-7478 
"AMP PEAK 10(17Q24.3) WILD-TYPE" "AMP PEAK 10(17Q24.3) WILD-TYPE" 
                    TCGA-HT-7479                     TCGA-HT-7480 
"AMP PEAK 10(17Q24.3) WILD-TYPE" "AMP PEAK 10(17Q24.3) WILD-TYPE" 
                    TCGA-HT-7481                     TCGA-HT-7482 
"AMP PEAK 10(17Q24.3) WILD-TYPE" "AMP PEAK 10(17Q24.3) WILD-TYPE" 
                    TCGA-HT-7483                     TCGA-HT-7485 
"AMP PEAK 10(17Q24.3) WILD-TYPE" "AMP PEAK 10(17Q24.3) WILD-TYPE" 
                    TCGA-HT-7601                     TCGA-HT-7602 
"AMP PEAK 10(17Q24.3) WILD-TYPE" "AMP PEAK 10(17Q24.3) WILD-TYPE" 
                    TCGA-HT-7603                     TCGA-HT-7604 
"AMP PEAK 10(17Q24.3) WILD-TYPE" "AMP PEAK 10(17Q24.3) WILD-TYPE" 
                    TCGA-HT-7605                     TCGA-HT-7606 
"AMP PEAK 10(17Q24.3) WILD-TYPE" "AMP PEAK 10(17Q24.3) WILD-TYPE" 
                    TCGA-HT-7607                     TCGA-HT-7608 
"AMP PEAK 10(17Q24.3) WILD-TYPE" "AMP PEAK 10(17Q24.3) WILD-TYPE" 
                    TCGA-HT-7609                     TCGA-HT-7610 
"AMP PEAK 10(17Q24.3) WILD-TYPE" "AMP PEAK 10(17Q24.3) WILD-TYPE" 
                    TCGA-HW-7486                     TCGA-HW-7487 
"AMP PEAK 10(17Q24.3) WILD-TYPE" "AMP PEAK 10(17Q24.3) WILD-TYPE" 
                    TCGA-HW-7489                     TCGA-HW-7490 
"AMP PEAK 10(17Q24.3) WILD-TYPE" "AMP PEAK 10(17Q24.3) WILD-TYPE" 
                    TCGA-HW-7491                     TCGA-HW-7493 
"AMP PEAK 10(17Q24.3) WILD-TYPE" "AMP PEAK 10(17Q24.3) WILD-TYPE" 
                    TCGA-HW-7495                     TCGA-IK-7675 
"AMP PEAK 10(17Q24.3) WILD-TYPE"   "AMP PEAK 10(17Q24.3) MUTATED" 
                    TCGA-IK-8125 
"AMP PEAK 10(17Q24.3) WILD-TYPE" 
                    TCGA-CS-4938                     TCGA-CS-4941 
"AMP PEAK 10(17Q24.3) WILD-TYPE" "AMP PEAK 10(17Q24.3) WILD-TYPE" 
                    TCGA-CS-4942                     TCGA-CS-4943 
"AMP PEAK 10(17Q24.3) WILD-TYPE" "AMP PEAK 10(17Q24.3) WILD-TYPE" 
                    TCGA-CS-4944                     TCGA-CS-5390 
"AMP PEAK 10(17Q24.3) WILD-TYPE" "AMP PEAK 10(17Q24.3) WILD-TYPE" 
                    TCGA-CS-5393                     TCGA-CS-5394 
"AMP PEAK 10(17Q24.3) WILD-TYPE" "AMP PEAK 10(17Q24.3) WILD-TYPE" 
                    TCGA-CS-5395                     TCGA-CS-5396 
"AMP PEAK 10(17Q24.3) WILD-TYPE" "AMP PEAK 10(17Q24.3) WILD-TYPE" 
                    TCGA-CS-5397                     TCGA-CS-6186 
"AMP PEAK 10(17Q24.3) WILD-TYPE" "AMP PEAK 10(17Q24.3) WILD-TYPE" 
                    TCGA-CS-6188                     TCGA-CS-6290 
"AMP PEAK 10(17Q24.3) WILD-TYPE" "AMP PEAK 10(17Q24.3) WILD-TYPE" 
                    TCGA-CS-6665                     TCGA-CS-6666 
  "AMP PEAK 10(17Q24.3) MUTATED" "AMP PEAK 10(17Q24.3) WILD-TYPE" 
                    TCGA-CS-6667                     TCGA-CS-6668 
"AMP PEAK 10(17Q24.3) WILD-TYPE" "AMP PEAK 10(17Q24.3) WILD-TYPE" 
                    TCGA-CS-6669                     TCGA-CS-6670 
"AMP PEAK 10(17Q24.3) WILD-TYPE" "AMP PEAK 10(17Q24.3) WILD-TYPE" 
                    TCGA-DB-5270                     TCGA-DB-5273 
"AMP PEAK 10(17Q24.3) WILD-TYPE" "AMP PEAK 10(17Q24.3) WILD-TYPE" 
                    TCGA-DB-5274                     TCGA-DB-5275 
"AMP PEAK 10(17Q24.3) WILD-TYPE" "AMP PEAK 10(17Q24.3) WILD-TYPE" 
                    TCGA-DB-5276                     TCGA-DB-5277 
"AMP PEAK 10(17Q24.3) WILD-TYPE" "AMP PEAK 10(17Q24.3) WILD-TYPE" 
                    TCGA-DB-5278                     TCGA-DB-5279 
"AMP PEAK 10(17Q24.3) WILD-TYPE" "AMP PEAK 10(17Q24.3) WILD-TYPE" 
                    TCGA-DB-5280                     TCGA-DB-5281 
"AMP PEAK 10(17Q24.3) WILD-TYPE" "AMP PEAK 10(17Q24.3) WILD-TYPE" 
                    TCGA-DH-5140                     TCGA-DH-5141 
  "AMP PEAK 10(17Q24.3) MUTATED" "AMP PEAK 10(17Q24.3) WILD-TYPE" 
                    TCGA-DH-5142                     TCGA-DH-5143 
"AMP PEAK 10(17Q24.3) WILD-TYPE" "AMP PEAK 10(17Q24.3) WILD-TYPE" 
                    TCGA-DH-5144                     TCGA-DU-5847 
"AMP PEAK 10(17Q24.3) WILD-TYPE" "AMP PEAK 10(17Q24.3) WILD-TYPE" 
                    TCGA-DU-5849                     TCGA-DU-5851 
"AMP PEAK 10(17Q24.3) WILD-TYPE" "AMP PEAK 10(17Q24.3) WILD-TYPE" 
                    TCGA-DU-5852                     TCGA-DU-5853 
"AMP PEAK 10(17Q24.3) WILD-TYPE" "AMP PEAK 10(17Q24.3) WILD-TYPE" 
                    TCGA-DU-5854                     TCGA-DU-5855 
"AMP PEAK 10(17Q24.3) WILD-TYPE" "AMP PEAK 10(17Q24.3) WILD-TYPE" 
                    TCGA-DU-5870                     TCGA-DU-5871 
"AMP PEAK 10(17Q24.3) WILD-TYPE" "AMP PEAK 10(17Q24.3) WILD-TYPE" 
                    TCGA-DU-5872                     TCGA-DU-5874 
"AMP PEAK 10(17Q24.3) WILD-TYPE" "AMP PEAK 10(17Q24.3) WILD-TYPE" 
                    TCGA-DU-6392                     TCGA-DU-6393 
"AMP PEAK 10(17Q24.3) WILD-TYPE" "AMP PEAK 10(17Q24.3) WILD-TYPE" 
                    TCGA-DU-6394                     TCGA-DU-6395 
"AMP PEAK 10(17Q24.3) WILD-TYPE" "AMP PEAK 10(17Q24.3) WILD-TYPE" 
                    TCGA-DU-6396                     TCGA-DU-6397 
"AMP PEAK 10(17Q24.3) WILD-TYPE" "AMP PEAK 10(17Q24.3) WILD-TYPE" 
                    TCGA-DU-6399                     TCGA-DU-6400 
  "AMP PEAK 10(17Q24.3) MUTATED" "AMP PEAK 10(17Q24.3) WILD-TYPE" 
                    TCGA-DU-6401                     TCGA-DU-6402 
"AMP PEAK 10(17Q24.3) WILD-TYPE" "AMP PEAK 10(17Q24.3) WILD-TYPE" 
                    TCGA-DU-6403                     TCGA-DU-6404 
"AMP PEAK 10(17Q24.3) WILD-TYPE" "AMP PEAK 10(17Q24.3) WILD-TYPE" 
                    TCGA-DU-6405                     TCGA-DU-6406 
"AMP PEAK 10(17Q24.3) WILD-TYPE" "AMP PEAK 10(17Q24.3) WILD-TYPE" 
                    TCGA-DU-6407                     TCGA-DU-6408 
"AMP PEAK 10(17Q24.3) WILD-TYPE" "AMP PEAK 10(17Q24.3) WILD-TYPE" 
                    TCGA-DU-6410                     TCGA-DU-6542 
"AMP PEAK 10(17Q24.3) WILD-TYPE" "AMP PEAK 10(17Q24.3) WILD-TYPE" 
                    TCGA-DU-7006                     TCGA-DU-7007 
"AMP PEAK 10(17Q24.3) WILD-TYPE" "AMP PEAK 10(17Q24.3) WILD-TYPE" 
                    TCGA-DU-7008                     TCGA-DU-7009 
"AMP PEAK 10(17Q24.3) WILD-TYPE" "AMP PEAK 10(17Q24.3) WILD-TYPE" 
                    TCGA-DU-7010                     TCGA-DU-7011 
  "AMP PEAK 10(17Q24.3) MUTATED" "AMP PEAK 10(17Q24.3) WILD-TYPE" 
                    TCGA-DU-7012                     TCGA-DU-7013 
"AMP PEAK 10(17Q24.3) WILD-TYPE"   "AMP PEAK 10(17Q24.3) MUTATED" 
                    TCGA-DU-7014                     TCGA-DU-7015 
"AMP PEAK 10(17Q24.3) WILD-TYPE" "AMP PEAK 10(17Q24.3) WILD-TYPE" 
                    TCGA-DU-7018                     TCGA-DU-7019 
"AMP PEAK 10(17Q24.3) WILD-TYPE" "AMP PEAK 10(17Q24.3) WILD-TYPE" 
                    TCGA-DU-7290                     TCGA-DU-7292 
"AMP PEAK 10(17Q24.3) WILD-TYPE" "AMP PEAK 10(17Q24.3) WILD-TYPE" 
                    TCGA-DU-7294                     TCGA-DU-7298 
"AMP PEAK 10(17Q24.3) WILD-TYPE" "AMP PEAK 10(17Q24.3) WILD-TYPE" 
                    TCGA-DU-7299                     TCGA-DU-7300 
"AMP PEAK 10(17Q24.3) WILD-TYPE" "AMP PEAK 10(17Q24.3) WILD-TYPE" 
                    TCGA-DU-7301                     TCGA-DU-7302 
"AMP PEAK 10(17Q24.3) WILD-TYPE" "AMP PEAK 10(17Q24.3) WILD-TYPE" 
                    TCGA-DU-7304                     TCGA-DU-7306 
  "AMP PEAK 10(17Q24.3) MUTATED" "AMP PEAK 10(17Q24.3) WILD-TYPE" 
                    TCGA-DU-7309                     TCGA-E1-5302 
"AMP PEAK 10(17Q24.3) WILD-TYPE" "AMP PEAK 10(17Q24.3) WILD-TYPE" 
                    TCGA-E1-5303                     TCGA-E1-5304 
"AMP PEAK 10(17Q24.3) WILD-TYPE"   "AMP PEAK 10(17Q24.3) MUTATED" 
                    TCGA-E1-5305                     TCGA-E1-5307 
"AMP PEAK 10(17Q24.3) WILD-TYPE" "AMP PEAK 10(17Q24.3) WILD-TYPE" 
                    TCGA-E1-5311                     TCGA-E1-5318 
"AMP PEAK 10(17Q24.3) WILD-TYPE"   "AMP PEAK 10(17Q24.3) MUTATED" 
                    TCGA-E1-5319                     TCGA-E1-5322 
"AMP PEAK 10(17Q24.3) WILD-TYPE" "AMP PEAK 10(17Q24.3) WILD-TYPE" 
                    TCGA-EZ-7264                     TCGA-FG-5962 
"AMP PEAK 10(17Q24.3) WILD-TYPE"   "AMP PEAK 10(17Q24.3) MUTATED" 
                    TCGA-FG-5963                     TCGA-FG-5964 
"AMP PEAK 10(17Q24.3) WILD-TYPE" "AMP PEAK 10(17Q24.3) WILD-TYPE" 
                    TCGA-FG-5965                     TCGA-FG-6688 
"AMP PEAK 10(17Q24.3) WILD-TYPE" "AMP PEAK 10(17Q24.3) WILD-TYPE" 
                    TCGA-FG-6689                     TCGA-FG-6690 
"AMP PEAK 10(17Q24.3) WILD-TYPE" "AMP PEAK 10(17Q24.3) WILD-TYPE" 
                    TCGA-FG-6691                     TCGA-FG-6692 
"AMP PEAK 10(17Q24.3) WILD-TYPE" "AMP PEAK 10(17Q24.3) WILD-TYPE" 
                    TCGA-FG-7634                     TCGA-FG-7636 
  "AMP PEAK 10(17Q24.3) MUTATED" "AMP PEAK 10(17Q24.3) WILD-TYPE" 
                    TCGA-FG-7638                     TCGA-FG-7643 
"AMP PEAK 10(17Q24.3) WILD-TYPE" "AMP PEAK 10(17Q24.3) WILD-TYPE" 
                    TCGA-FN-7833                     TCGA-HT-7467 
"AMP PEAK 10(17Q24.3) WILD-TYPE" "AMP PEAK 10(17Q24.3) WILD-TYPE" 
                    TCGA-HT-7468                     TCGA-HT-7470 
"AMP PEAK 10(17Q24.3) WILD-TYPE" "AMP PEAK 10(17Q24.3) WILD-TYPE" 
                    TCGA-HT-7472                     TCGA-HT-7473 
"AMP PEAK 10(17Q24.3) WILD-TYPE" "AMP PEAK 10(17Q24.3) WILD-TYPE" 
                    TCGA-HT-7474                     TCGA-HT-7475 
"AMP PEAK 10(17Q24.3) WILD-TYPE" "AMP PEAK 10(17Q24.3) WILD-TYPE" 
                    TCGA-HT-7476                     TCGA-HT-7478 
"AMP PEAK 10(17Q24.3) WILD-TYPE" "AMP PEAK 10(17Q24.3) WILD-TYPE" 
                    TCGA-HT-7479                     TCGA-HT-7480 
"AMP PEAK 10(17Q24.3) WILD-TYPE" "AMP PEAK 10(17Q24.3) WILD-TYPE" 
                    TCGA-HT-7481                     TCGA-HT-7482 
"AMP PEAK 10(17Q24.3) WILD-TYPE" "AMP PEAK 10(17Q24.3) WILD-TYPE" 
                    TCGA-HT-7483                     TCGA-HT-7485 
"AMP PEAK 10(17Q24.3) WILD-TYPE" "AMP PEAK 10(17Q24.3) WILD-TYPE" 
                    TCGA-HT-7601                     TCGA-HT-7602 
"AMP PEAK 10(17Q24.3) WILD-TYPE" "AMP PEAK 10(17Q24.3) WILD-TYPE" 
                    TCGA-HT-7603                     TCGA-HT-7604 
"AMP PEAK 10(17Q24.3) WILD-TYPE" "AMP PEAK 10(17Q24.3) WILD-TYPE" 
                    TCGA-HT-7605                     TCGA-HT-7606 
"AMP PEAK 10(17Q24.3) WILD-TYPE" "AMP PEAK 10(17Q24.3) WILD-TYPE" 
                    TCGA-HT-7607                     TCGA-HT-7608 
"AMP PEAK 10(17Q24.3) WILD-TYPE" "AMP PEAK 10(17Q24.3) WILD-TYPE" 
                    TCGA-HT-7609                     TCGA-HT-7610 
"AMP PEAK 10(17Q24.3) WILD-TYPE" "AMP PEAK 10(17Q24.3) WILD-TYPE" 
                    TCGA-HW-7486                     TCGA-HW-7487 
"AMP PEAK 10(17Q24.3) WILD-TYPE" "AMP PEAK 10(17Q24.3) WILD-TYPE" 
                    TCGA-HW-7489                     TCGA-HW-7490 
"AMP PEAK 10(17Q24.3) WILD-TYPE" "AMP PEAK 10(17Q24.3) WILD-TYPE" 
                    TCGA-HW-7491                     TCGA-HW-7493 
"AMP PEAK 10(17Q24.3) WILD-TYPE" "AMP PEAK 10(17Q24.3) WILD-TYPE" 
                    TCGA-HW-7495                     TCGA-IK-7675 
"AMP PEAK 10(17Q24.3) WILD-TYPE"   "AMP PEAK 10(17Q24.3) MUTATED" 
                    TCGA-IK-8125 
"AMP PEAK 10(17Q24.3) WILD-TYPE" 
                    TCGA-CS-4938                     TCGA-CS-4941 
"AMP PEAK 10(17Q24.3) WILD-TYPE" "AMP PEAK 10(17Q24.3) WILD-TYPE" 
                    TCGA-CS-4942                     TCGA-CS-4943 
"AMP PEAK 10(17Q24.3) WILD-TYPE" "AMP PEAK 10(17Q24.3) WILD-TYPE" 
                    TCGA-CS-4944                     TCGA-CS-5390 
"AMP PEAK 10(17Q24.3) WILD-TYPE" "AMP PEAK 10(17Q24.3) WILD-TYPE" 
                    TCGA-CS-5393                     TCGA-CS-5394 
"AMP PEAK 10(17Q24.3) WILD-TYPE" "AMP PEAK 10(17Q24.3) WILD-TYPE" 
                    TCGA-CS-5395                     TCGA-CS-5396 
"AMP PEAK 10(17Q24.3) WILD-TYPE" "AMP PEAK 10(17Q24.3) WILD-TYPE" 
                    TCGA-CS-5397                     TCGA-CS-6186 
"AMP PEAK 10(17Q24.3) WILD-TYPE" "AMP PEAK 10(17Q24.3) WILD-TYPE" 
                    TCGA-CS-6188                     TCGA-CS-6290 
"AMP PEAK 10(17Q24.3) WILD-TYPE" "AMP PEAK 10(17Q24.3) WILD-TYPE" 
                    TCGA-CS-6665                     TCGA-CS-6666 
  "AMP PEAK 10(17Q24.3) MUTATED" "AMP PEAK 10(17Q24.3) WILD-TYPE" 
                    TCGA-CS-6667                     TCGA-CS-6668 
"AMP PEAK 10(17Q24.3) WILD-TYPE" "AMP PEAK 10(17Q24.3) WILD-TYPE" 
                    TCGA-CS-6669                     TCGA-CS-6670 
"AMP PEAK 10(17Q24.3) WILD-TYPE" "AMP PEAK 10(17Q24.3) WILD-TYPE" 
                    TCGA-DB-5270                     TCGA-DB-5273 
"AMP PEAK 10(17Q24.3) WILD-TYPE" "AMP PEAK 10(17Q24.3) WILD-TYPE" 
                    TCGA-DB-5274                     TCGA-DB-5275 
"AMP PEAK 10(17Q24.3) WILD-TYPE" "AMP PEAK 10(17Q24.3) WILD-TYPE" 
                    TCGA-DB-5276                     TCGA-DB-5277 
"AMP PEAK 10(17Q24.3) WILD-TYPE" "AMP PEAK 10(17Q24.3) WILD-TYPE" 
                    TCGA-DB-5278                     TCGA-DB-5279 
"AMP PEAK 10(17Q24.3) WILD-TYPE" "AMP PEAK 10(17Q24.3) WILD-TYPE" 
                    TCGA-DB-5280                     TCGA-DB-5281 
"AMP PEAK 10(17Q24.3) WILD-TYPE" "AMP PEAK 10(17Q24.3) WILD-TYPE" 
                    TCGA-DH-5140                     TCGA-DH-5141 
  "AMP PEAK 10(17Q24.3) MUTATED" "AMP PEAK 10(17Q24.3) WILD-TYPE" 
                    TCGA-DH-5142                     TCGA-DH-5143 
"AMP PEAK 10(17Q24.3) WILD-TYPE" "AMP PEAK 10(17Q24.3) WILD-TYPE" 
                    TCGA-DH-5144                     TCGA-DU-5847 
"AMP PEAK 10(17Q24.3) WILD-TYPE" "AMP PEAK 10(17Q24.3) WILD-TYPE" 
                    TCGA-DU-5849                     TCGA-DU-5851 
"AMP PEAK 10(17Q24.3) WILD-TYPE" "AMP PEAK 10(17Q24.3) WILD-TYPE" 
                    TCGA-DU-5852                     TCGA-DU-5853 
"AMP PEAK 10(17Q24.3) WILD-TYPE" "AMP PEAK 10(17Q24.3) WILD-TYPE" 
                    TCGA-DU-5854                     TCGA-DU-5855 
"AMP PEAK 10(17Q24.3) WILD-TYPE" "AMP PEAK 10(17Q24.3) WILD-TYPE" 
                    TCGA-DU-5870                     TCGA-DU-5871 
"AMP PEAK 10(17Q24.3) WILD-TYPE" "AMP PEAK 10(17Q24.3) WILD-TYPE" 
                    TCGA-DU-5872                     TCGA-DU-5874 
"AMP PEAK 10(17Q24.3) WILD-TYPE" "AMP PEAK 10(17Q24.3) WILD-TYPE" 
                    TCGA-DU-6392                     TCGA-DU-6393 
"AMP PEAK 10(17Q24.3) WILD-TYPE" "AMP PEAK 10(17Q24.3) WILD-TYPE" 
                    TCGA-DU-6394                     TCGA-DU-6395 
"AMP PEAK 10(17Q24.3) WILD-TYPE" "AMP PEAK 10(17Q24.3) WILD-TYPE" 
                    TCGA-DU-6396                     TCGA-DU-6397 
"AMP PEAK 10(17Q24.3) WILD-TYPE" "AMP PEAK 10(17Q24.3) WILD-TYPE" 
                    TCGA-DU-6399                     TCGA-DU-6400 
  "AMP PEAK 10(17Q24.3) MUTATED" "AMP PEAK 10(17Q24.3) WILD-TYPE" 
                    TCGA-DU-6401                     TCGA-DU-6402 
"AMP PEAK 10(17Q24.3) WILD-TYPE" "AMP PEAK 10(17Q24.3) WILD-TYPE" 
                    TCGA-DU-6403                     TCGA-DU-6404 
"AMP PEAK 10(17Q24.3) WILD-TYPE" "AMP PEAK 10(17Q24.3) WILD-TYPE" 
                    TCGA-DU-6405                     TCGA-DU-6406 
"AMP PEAK 10(17Q24.3) WILD-TYPE" "AMP PEAK 10(17Q24.3) WILD-TYPE" 
                    TCGA-DU-6407                     TCGA-DU-6408 
"AMP PEAK 10(17Q24.3) WILD-TYPE" "AMP PEAK 10(17Q24.3) WILD-TYPE" 
                    TCGA-DU-6410                     TCGA-DU-6542 
"AMP PEAK 10(17Q24.3) WILD-TYPE" "AMP PEAK 10(17Q24.3) WILD-TYPE" 
                    TCGA-DU-7006                     TCGA-DU-7007 
"AMP PEAK 10(17Q24.3) WILD-TYPE" "AMP PEAK 10(17Q24.3) WILD-TYPE" 
                    TCGA-DU-7008                     TCGA-DU-7009 
"AMP PEAK 10(17Q24.3) WILD-TYPE" "AMP PEAK 10(17Q24.3) WILD-TYPE" 
                    TCGA-DU-7010                     TCGA-DU-7011 
  "AMP PEAK 10(17Q24.3) MUTATED" "AMP PEAK 10(17Q24.3) WILD-TYPE" 
                    TCGA-DU-7012                     TCGA-DU-7013 
"AMP PEAK 10(17Q24.3) WILD-TYPE"   "AMP PEAK 10(17Q24.3) MUTATED" 
                    TCGA-DU-7014                     TCGA-DU-7015 
"AMP PEAK 10(17Q24.3) WILD-TYPE" "AMP PEAK 10(17Q24.3) WILD-TYPE" 
                    TCGA-DU-7018                     TCGA-DU-7019 
"AMP PEAK 10(17Q24.3) WILD-TYPE" "AMP PEAK 10(17Q24.3) WILD-TYPE" 
                    TCGA-DU-7290                     TCGA-DU-7292 
"AMP PEAK 10(17Q24.3) WILD-TYPE" "AMP PEAK 10(17Q24.3) WILD-TYPE" 
                    TCGA-DU-7294                     TCGA-DU-7298 
"AMP PEAK 10(17Q24.3) WILD-TYPE" "AMP PEAK 10(17Q24.3) WILD-TYPE" 
                    TCGA-DU-7299                     TCGA-DU-7300 
"AMP PEAK 10(17Q24.3) WILD-TYPE" "AMP PEAK 10(17Q24.3) WILD-TYPE" 
                    TCGA-DU-7301                     TCGA-DU-7302 
"AMP PEAK 10(17Q24.3) WILD-TYPE" "AMP PEAK 10(17Q24.3) WILD-TYPE" 
                    TCGA-DU-7304                     TCGA-DU-7306 
  "AMP PEAK 10(17Q24.3) MUTATED" "AMP PEAK 10(17Q24.3) WILD-TYPE" 
                    TCGA-DU-7309                     TCGA-E1-5302 
"AMP PEAK 10(17Q24.3) WILD-TYPE" "AMP PEAK 10(17Q24.3) WILD-TYPE" 
                    TCGA-E1-5303                     TCGA-E1-5304 
"AMP PEAK 10(17Q24.3) WILD-TYPE"   "AMP PEAK 10(17Q24.3) MUTATED" 
                    TCGA-E1-5305                     TCGA-E1-5307 
"AMP PEAK 10(17Q24.3) WILD-TYPE" "AMP PEAK 10(17Q24.3) WILD-TYPE" 
                    TCGA-E1-5311                     TCGA-E1-5318 
"AMP PEAK 10(17Q24.3) WILD-TYPE"   "AMP PEAK 10(17Q24.3) MUTATED" 
                    TCGA-E1-5319                     TCGA-E1-5322 
"AMP PEAK 10(17Q24.3) WILD-TYPE" "AMP PEAK 10(17Q24.3) WILD-TYPE" 
                    TCGA-EZ-7264                     TCGA-FG-5962 
"AMP PEAK 10(17Q24.3) WILD-TYPE"   "AMP PEAK 10(17Q24.3) MUTATED" 
                    TCGA-FG-5963                     TCGA-FG-5964 
"AMP PEAK 10(17Q24.3) WILD-TYPE" "AMP PEAK 10(17Q24.3) WILD-TYPE" 
                    TCGA-FG-5965                     TCGA-FG-6688 
"AMP PEAK 10(17Q24.3) WILD-TYPE" "AMP PEAK 10(17Q24.3) WILD-TYPE" 
                    TCGA-FG-6689                     TCGA-FG-6690 
"AMP PEAK 10(17Q24.3) WILD-TYPE" "AMP PEAK 10(17Q24.3) WILD-TYPE" 
                    TCGA-FG-6691                     TCGA-FG-6692 
"AMP PEAK 10(17Q24.3) WILD-TYPE" "AMP PEAK 10(17Q24.3) WILD-TYPE" 
                    TCGA-FG-7634                     TCGA-FG-7636 
  "AMP PEAK 10(17Q24.3) MUTATED" "AMP PEAK 10(17Q24.3) WILD-TYPE" 
                    TCGA-FG-7638                     TCGA-FG-7643 
"AMP PEAK 10(17Q24.3) WILD-TYPE" "AMP PEAK 10(17Q24.3) WILD-TYPE" 
                    TCGA-FN-7833                     TCGA-HT-7467 
"AMP PEAK 10(17Q24.3) WILD-TYPE" "AMP PEAK 10(17Q24.3) WILD-TYPE" 
                    TCGA-HT-7468                     TCGA-HT-7470 
"AMP PEAK 10(17Q24.3) WILD-TYPE" "AMP PEAK 10(17Q24.3) WILD-TYPE" 
                    TCGA-HT-7472                     TCGA-HT-7473 
"AMP PEAK 10(17Q24.3) WILD-TYPE" "AMP PEAK 10(17Q24.3) WILD-TYPE" 
                    TCGA-HT-7474                     TCGA-HT-7475 
"AMP PEAK 10(17Q24.3) WILD-TYPE" "AMP PEAK 10(17Q24.3) WILD-TYPE" 
                    TCGA-HT-7476                     TCGA-HT-7478 
"AMP PEAK 10(17Q24.3) WILD-TYPE" "AMP PEAK 10(17Q24.3) WILD-TYPE" 
                    TCGA-HT-7479                     TCGA-HT-7480 
"AMP PEAK 10(17Q24.3) WILD-TYPE" "AMP PEAK 10(17Q24.3) WILD-TYPE" 
                    TCGA-HT-7481                     TCGA-HT-7482 
"AMP PEAK 10(17Q24.3) WILD-TYPE" "AMP PEAK 10(17Q24.3) WILD-TYPE" 
                    TCGA-HT-7483                     TCGA-HT-7485 
"AMP PEAK 10(17Q24.3) WILD-TYPE" "AMP PEAK 10(17Q24.3) WILD-TYPE" 
                    TCGA-HT-7601                     TCGA-HT-7602 
"AMP PEAK 10(17Q24.3) WILD-TYPE" "AMP PEAK 10(17Q24.3) WILD-TYPE" 
                    TCGA-HT-7603                     TCGA-HT-7604 
"AMP PEAK 10(17Q24.3) WILD-TYPE" "AMP PEAK 10(17Q24.3) WILD-TYPE" 
                    TCGA-HT-7605                     TCGA-HT-7606 
"AMP PEAK 10(17Q24.3) WILD-TYPE" "AMP PEAK 10(17Q24.3) WILD-TYPE" 
                    TCGA-HT-7607                     TCGA-HT-7608 
"AMP PEAK 10(17Q24.3) WILD-TYPE" "AMP PEAK 10(17Q24.3) WILD-TYPE" 
                    TCGA-HT-7609                     TCGA-HT-7610 
"AMP PEAK 10(17Q24.3) WILD-TYPE" "AMP PEAK 10(17Q24.3) WILD-TYPE" 
                    TCGA-HW-7486                     TCGA-HW-7487 
"AMP PEAK 10(17Q24.3) WILD-TYPE" "AMP PEAK 10(17Q24.3) WILD-TYPE" 
                    TCGA-HW-7489                     TCGA-HW-7490 
"AMP PEAK 10(17Q24.3) WILD-TYPE" "AMP PEAK 10(17Q24.3) WILD-TYPE" 
                    TCGA-HW-7491                     TCGA-HW-7493 
"AMP PEAK 10(17Q24.3) WILD-TYPE" "AMP PEAK 10(17Q24.3) WILD-TYPE" 
                    TCGA-HW-7495                     TCGA-IK-7675 
"AMP PEAK 10(17Q24.3) WILD-TYPE"   "AMP PEAK 10(17Q24.3) MUTATED" 
                    TCGA-IK-8125 
"AMP PEAK 10(17Q24.3) WILD-TYPE" 
[1] "hr=" "3.2"
D10V2, continuous
D10V3, binary
[1] "tbl2"
                                cls
clus                             [,1] [,2]
  AMP PEAK 10(17Q24.3) MUTATED      4    7
  AMP PEAK 10(17Q24.3) WILD-TYPE   58   76
        clus
vv       AMP PEAK 10(17Q24.3) MUTATED AMP PEAK 10(17Q24.3) WILD-TYPE
  FEMALE                            4                             58
  MALE                              7                             76
D10V4, continuous
D10V5, multiclass
                   clus
vv                  AMP PEAK 10(17Q24.3) MUTATED AMP PEAK 10(17Q24.3) WILD-TYPE
  ASTROCYTOMA                                  4                             46
  OLIGOASTROCYTOMA                             2                             34
  OLIGODENDROGLIOMA                            5                             53
D10V6, binary
[1] "tbl2"
                                cls
clus                             [,1] [,2]
  AMP PEAK 10(17Q24.3) MUTATED      2    9
  AMP PEAK 10(17Q24.3) WILD-TYPE   57   77
     clus
vv    AMP PEAK 10(17Q24.3) MUTATED AMP PEAK 10(17Q24.3) WILD-TYPE
  NO                             9                             77
  YES                            2                             57
D10V7, binary
[1] "tbl2"
                                cls
clus                             [,1] [,2]
  AMP PEAK 10(17Q24.3) MUTATED      4    7
  AMP PEAK 10(17Q24.3) WILD-TYPE   70   64
     clus
vv    AMP PEAK 10(17Q24.3) MUTATED AMP PEAK 10(17Q24.3) WILD-TYPE
  NO                             7                             64
  YES                            4                             70

Clustering(11) Variable = Amp Peak 11(19q13.2) mutation analysis
D11V1, survival
                    TCGA-CS-4938                     TCGA-CS-4941 
"AMP PEAK 11(19Q13.2) WILD-TYPE" "AMP PEAK 11(19Q13.2) WILD-TYPE" 
                    TCGA-CS-4942                     TCGA-CS-4943 
  "AMP PEAK 11(19Q13.2) MUTATED" "AMP PEAK 11(19Q13.2) WILD-TYPE" 
                    TCGA-CS-4944                     TCGA-CS-5390 
  "AMP PEAK 11(19Q13.2) MUTATED" "AMP PEAK 11(19Q13.2) WILD-TYPE" 
                    TCGA-CS-5393                     TCGA-CS-5394 
"AMP PEAK 11(19Q13.2) WILD-TYPE" "AMP PEAK 11(19Q13.2) WILD-TYPE" 
                    TCGA-CS-5395                     TCGA-CS-5396 
  "AMP PEAK 11(19Q13.2) MUTATED" "AMP PEAK 11(19Q13.2) WILD-TYPE" 
                    TCGA-CS-5397                     TCGA-CS-6186 
"AMP PEAK 11(19Q13.2) WILD-TYPE"   "AMP PEAK 11(19Q13.2) MUTATED" 
                    TCGA-CS-6188                     TCGA-CS-6290 
  "AMP PEAK 11(19Q13.2) MUTATED" "AMP PEAK 11(19Q13.2) WILD-TYPE" 
                    TCGA-CS-6665                     TCGA-CS-6666 
"AMP PEAK 11(19Q13.2) WILD-TYPE" "AMP PEAK 11(19Q13.2) WILD-TYPE" 
                    TCGA-CS-6667                     TCGA-CS-6668 
"AMP PEAK 11(19Q13.2) WILD-TYPE" "AMP PEAK 11(19Q13.2) WILD-TYPE" 
                    TCGA-CS-6669                     TCGA-CS-6670 
"AMP PEAK 11(19Q13.2) WILD-TYPE" "AMP PEAK 11(19Q13.2) WILD-TYPE" 
                    TCGA-DB-5270                     TCGA-DB-5273 
"AMP PEAK 11(19Q13.2) WILD-TYPE" "AMP PEAK 11(19Q13.2) WILD-TYPE" 
                    TCGA-DB-5274                     TCGA-DB-5275 
"AMP PEAK 11(19Q13.2) WILD-TYPE" "AMP PEAK 11(19Q13.2) WILD-TYPE" 
                    TCGA-DB-5276                     TCGA-DB-5277 
"AMP PEAK 11(19Q13.2) WILD-TYPE" "AMP PEAK 11(19Q13.2) WILD-TYPE" 
                    TCGA-DB-5278                     TCGA-DB-5279 
"AMP PEAK 11(19Q13.2) WILD-TYPE" "AMP PEAK 11(19Q13.2) WILD-TYPE" 
                    TCGA-DB-5280                     TCGA-DB-5281 
"AMP PEAK 11(19Q13.2) WILD-TYPE" "AMP PEAK 11(19Q13.2) WILD-TYPE" 
                    TCGA-DH-5140                     TCGA-DH-5141 
"AMP PEAK 11(19Q13.2) WILD-TYPE" "AMP PEAK 11(19Q13.2) WILD-TYPE" 
                    TCGA-DH-5142                     TCGA-DH-5143 
"AMP PEAK 11(19Q13.2) WILD-TYPE" "AMP PEAK 11(19Q13.2) WILD-TYPE" 
                    TCGA-DH-5144                     TCGA-DU-5847 
"AMP PEAK 11(19Q13.2) WILD-TYPE" "AMP PEAK 11(19Q13.2) WILD-TYPE" 
                    TCGA-DU-5849                     TCGA-DU-5851 
"AMP PEAK 11(19Q13.2) WILD-TYPE" "AMP PEAK 11(19Q13.2) WILD-TYPE" 
                    TCGA-DU-5852                     TCGA-DU-5853 
"AMP PEAK 11(19Q13.2) WILD-TYPE" "AMP PEAK 11(19Q13.2) WILD-TYPE" 
                    TCGA-DU-5854                     TCGA-DU-5855 
"AMP PEAK 11(19Q13.2) WILD-TYPE" "AMP PEAK 11(19Q13.2) WILD-TYPE" 
                    TCGA-DU-5870                     TCGA-DU-5871 
"AMP PEAK 11(19Q13.2) WILD-TYPE" "AMP PEAK 11(19Q13.2) WILD-TYPE" 
                    TCGA-DU-5872                     TCGA-DU-5874 
"AMP PEAK 11(19Q13.2) WILD-TYPE" "AMP PEAK 11(19Q13.2) WILD-TYPE" 
                    TCGA-DU-6392                     TCGA-DU-6393 
"AMP PEAK 11(19Q13.2) WILD-TYPE" "AMP PEAK 11(19Q13.2) WILD-TYPE" 
                    TCGA-DU-6394                     TCGA-DU-6395 
"AMP PEAK 11(19Q13.2) WILD-TYPE" "AMP PEAK 11(19Q13.2) WILD-TYPE" 
                    TCGA-DU-6396                     TCGA-DU-6397 
"AMP PEAK 11(19Q13.2) WILD-TYPE" "AMP PEAK 11(19Q13.2) WILD-TYPE" 
                    TCGA-DU-6399                     TCGA-DU-6400 
"AMP PEAK 11(19Q13.2) WILD-TYPE" "AMP PEAK 11(19Q13.2) WILD-TYPE" 
                    TCGA-DU-6401                     TCGA-DU-6402 
"AMP PEAK 11(19Q13.2) WILD-TYPE"   "AMP PEAK 11(19Q13.2) MUTATED" 
                    TCGA-DU-6403                     TCGA-DU-6404 
"AMP PEAK 11(19Q13.2) WILD-TYPE" "AMP PEAK 11(19Q13.2) WILD-TYPE" 
                    TCGA-DU-6405                     TCGA-DU-6406 
"AMP PEAK 11(19Q13.2) WILD-TYPE"   "AMP PEAK 11(19Q13.2) MUTATED" 
                    TCGA-DU-6407                     TCGA-DU-6408 
"AMP PEAK 11(19Q13.2) WILD-TYPE" "AMP PEAK 11(19Q13.2) WILD-TYPE" 
                    TCGA-DU-6410                     TCGA-DU-6542 
"AMP PEAK 11(19Q13.2) WILD-TYPE" "AMP PEAK 11(19Q13.2) WILD-TYPE" 
                    TCGA-DU-7006                     TCGA-DU-7007 
"AMP PEAK 11(19Q13.2) WILD-TYPE" "AMP PEAK 11(19Q13.2) WILD-TYPE" 
                    TCGA-DU-7008                     TCGA-DU-7009 
"AMP PEAK 11(19Q13.2) WILD-TYPE" "AMP PEAK 11(19Q13.2) WILD-TYPE" 
                    TCGA-DU-7010                     TCGA-DU-7011 
  "AMP PEAK 11(19Q13.2) MUTATED" "AMP PEAK 11(19Q13.2) WILD-TYPE" 
                    TCGA-DU-7012                     TCGA-DU-7013 
"AMP PEAK 11(19Q13.2) WILD-TYPE" "AMP PEAK 11(19Q13.2) WILD-TYPE" 
                    TCGA-DU-7014                     TCGA-DU-7015 
"AMP PEAK 11(19Q13.2) WILD-TYPE" "AMP PEAK 11(19Q13.2) WILD-TYPE" 
                    TCGA-DU-7018                     TCGA-DU-7019 
"AMP PEAK 11(19Q13.2) WILD-TYPE" "AMP PEAK 11(19Q13.2) WILD-TYPE" 
                    TCGA-DU-7290                     TCGA-DU-7292 
"AMP PEAK 11(19Q13.2) WILD-TYPE" "AMP PEAK 11(19Q13.2) WILD-TYPE" 
                    TCGA-DU-7294                     TCGA-DU-7298 
"AMP PEAK 11(19Q13.2) WILD-TYPE" "AMP PEAK 11(19Q13.2) WILD-TYPE" 
                    TCGA-DU-7299                     TCGA-DU-7300 
"AMP PEAK 11(19Q13.2) WILD-TYPE" "AMP PEAK 11(19Q13.2) WILD-TYPE" 
                    TCGA-DU-7301                     TCGA-DU-7302 
"AMP PEAK 11(19Q13.2) WILD-TYPE" "AMP PEAK 11(19Q13.2) WILD-TYPE" 
                    TCGA-DU-7304                     TCGA-DU-7306 
"AMP PEAK 11(19Q13.2) WILD-TYPE" "AMP PEAK 11(19Q13.2) WILD-TYPE" 
                    TCGA-DU-7309                     TCGA-E1-5302 
"AMP PEAK 11(19Q13.2) WILD-TYPE" "AMP PEAK 11(19Q13.2) WILD-TYPE" 
                    TCGA-E1-5303                     TCGA-E1-5304 
"AMP PEAK 11(19Q13.2) WILD-TYPE" "AMP PEAK 11(19Q13.2) WILD-TYPE" 
                    TCGA-E1-5305                     TCGA-E1-5307 
"AMP PEAK 11(19Q13.2) WILD-TYPE" "AMP PEAK 11(19Q13.2) WILD-TYPE" 
                    TCGA-E1-5311                     TCGA-E1-5318 
"AMP PEAK 11(19Q13.2) WILD-TYPE" "AMP PEAK 11(19Q13.2) WILD-TYPE" 
                    TCGA-E1-5319                     TCGA-E1-5322 
"AMP PEAK 11(19Q13.2) WILD-TYPE" "AMP PEAK 11(19Q13.2) WILD-TYPE" 
                    TCGA-EZ-7264                     TCGA-FG-5962 
"AMP PEAK 11(19Q13.2) WILD-TYPE" "AMP PEAK 11(19Q13.2) WILD-TYPE" 
                    TCGA-FG-5963                     TCGA-FG-5964 
"AMP PEAK 11(19Q13.2) WILD-TYPE" "AMP PEAK 11(19Q13.2) WILD-TYPE" 
                    TCGA-FG-5965                     TCGA-FG-6688 
"AMP PEAK 11(19Q13.2) WILD-TYPE" "AMP PEAK 11(19Q13.2) WILD-TYPE" 
                    TCGA-FG-6689                     TCGA-FG-6690 
"AMP PEAK 11(19Q13.2) WILD-TYPE" "AMP PEAK 11(19Q13.2) WILD-TYPE" 
                    TCGA-FG-6691                     TCGA-FG-6692 
"AMP PEAK 11(19Q13.2) WILD-TYPE"   "AMP PEAK 11(19Q13.2) MUTATED" 
                    TCGA-FG-7634                     TCGA-FG-7636 
"AMP PEAK 11(19Q13.2) WILD-TYPE" "AMP PEAK 11(19Q13.2) WILD-TYPE" 
                    TCGA-FG-7638                     TCGA-FG-7643 
"AMP PEAK 11(19Q13.2) WILD-TYPE"   "AMP PEAK 11(19Q13.2) MUTATED" 
                    TCGA-FN-7833                     TCGA-HT-7467 
"AMP PEAK 11(19Q13.2) WILD-TYPE" "AMP PEAK 11(19Q13.2) WILD-TYPE" 
                    TCGA-HT-7468                     TCGA-HT-7470 
"AMP PEAK 11(19Q13.2) WILD-TYPE" "AMP PEAK 11(19Q13.2) WILD-TYPE" 
                    TCGA-HT-7472                     TCGA-HT-7473 
  "AMP PEAK 11(19Q13.2) MUTATED" "AMP PEAK 11(19Q13.2) WILD-TYPE" 
                    TCGA-HT-7474                     TCGA-HT-7475 
"AMP PEAK 11(19Q13.2) WILD-TYPE" "AMP PEAK 11(19Q13.2) WILD-TYPE" 
                    TCGA-HT-7476                     TCGA-HT-7478 
"AMP PEAK 11(19Q13.2) WILD-TYPE" "AMP PEAK 11(19Q13.2) WILD-TYPE" 
                    TCGA-HT-7479                     TCGA-HT-7480 
"AMP PEAK 11(19Q13.2) WILD-TYPE" "AMP PEAK 11(19Q13.2) WILD-TYPE" 
                    TCGA-HT-7481                     TCGA-HT-7482 
"AMP PEAK 11(19Q13.2) WILD-TYPE" "AMP PEAK 11(19Q13.2) WILD-TYPE" 
                    TCGA-HT-7483                     TCGA-HT-7485 
"AMP PEAK 11(19Q13.2) WILD-TYPE" "AMP PEAK 11(19Q13.2) WILD-TYPE" 
                    TCGA-HT-7601                     TCGA-HT-7602 
"AMP PEAK 11(19Q13.2) WILD-TYPE" "AMP PEAK 11(19Q13.2) WILD-TYPE" 
                    TCGA-HT-7603                     TCGA-HT-7604 
"AMP PEAK 11(19Q13.2) WILD-TYPE" "AMP PEAK 11(19Q13.2) WILD-TYPE" 
                    TCGA-HT-7605                     TCGA-HT-7606 
"AMP PEAK 11(19Q13.2) WILD-TYPE" "AMP PEAK 11(19Q13.2) WILD-TYPE" 
                    TCGA-HT-7607                     TCGA-HT-7608 
"AMP PEAK 11(19Q13.2) WILD-TYPE" "AMP PEAK 11(19Q13.2) WILD-TYPE" 
                    TCGA-HT-7609                     TCGA-HT-7610 
"AMP PEAK 11(19Q13.2) WILD-TYPE" "AMP PEAK 11(19Q13.2) WILD-TYPE" 
                    TCGA-HW-7486                     TCGA-HW-7487 
"AMP PEAK 11(19Q13.2) WILD-TYPE" "AMP PEAK 11(19Q13.2) WILD-TYPE" 
                    TCGA-HW-7489                     TCGA-HW-7490 
"AMP PEAK 11(19Q13.2) WILD-TYPE" "AMP PEAK 11(19Q13.2) WILD-TYPE" 
                    TCGA-HW-7491                     TCGA-HW-7493 
"AMP PEAK 11(19Q13.2) WILD-TYPE" "AMP PEAK 11(19Q13.2) WILD-TYPE" 
                    TCGA-HW-7495                     TCGA-IK-7675 
"AMP PEAK 11(19Q13.2) WILD-TYPE" "AMP PEAK 11(19Q13.2) WILD-TYPE" 
                    TCGA-IK-8125 
"AMP PEAK 11(19Q13.2) WILD-TYPE" 
                    TCGA-CS-4938                     TCGA-CS-4941 
"AMP PEAK 11(19Q13.2) WILD-TYPE" "AMP PEAK 11(19Q13.2) WILD-TYPE" 
                    TCGA-CS-4942                     TCGA-CS-4943 
  "AMP PEAK 11(19Q13.2) MUTATED" "AMP PEAK 11(19Q13.2) WILD-TYPE" 
                    TCGA-CS-4944                     TCGA-CS-5390 
  "AMP PEAK 11(19Q13.2) MUTATED" "AMP PEAK 11(19Q13.2) WILD-TYPE" 
                    TCGA-CS-5393                     TCGA-CS-5394 
"AMP PEAK 11(19Q13.2) WILD-TYPE" "AMP PEAK 11(19Q13.2) WILD-TYPE" 
                    TCGA-CS-5395                     TCGA-CS-5396 
  "AMP PEAK 11(19Q13.2) MUTATED" "AMP PEAK 11(19Q13.2) WILD-TYPE" 
                    TCGA-CS-5397                     TCGA-CS-6186 
"AMP PEAK 11(19Q13.2) WILD-TYPE"   "AMP PEAK 11(19Q13.2) MUTATED" 
                    TCGA-CS-6188                     TCGA-CS-6290 
  "AMP PEAK 11(19Q13.2) MUTATED" "AMP PEAK 11(19Q13.2) WILD-TYPE" 
                    TCGA-CS-6665                     TCGA-CS-6666 
"AMP PEAK 11(19Q13.2) WILD-TYPE" "AMP PEAK 11(19Q13.2) WILD-TYPE" 
                    TCGA-CS-6667                     TCGA-CS-6668 
"AMP PEAK 11(19Q13.2) WILD-TYPE" "AMP PEAK 11(19Q13.2) WILD-TYPE" 
                    TCGA-CS-6669                     TCGA-CS-6670 
"AMP PEAK 11(19Q13.2) WILD-TYPE" "AMP PEAK 11(19Q13.2) WILD-TYPE" 
                    TCGA-DB-5270                     TCGA-DB-5273 
"AMP PEAK 11(19Q13.2) WILD-TYPE" "AMP PEAK 11(19Q13.2) WILD-TYPE" 
                    TCGA-DB-5274                     TCGA-DB-5275 
"AMP PEAK 11(19Q13.2) WILD-TYPE" "AMP PEAK 11(19Q13.2) WILD-TYPE" 
                    TCGA-DB-5276                     TCGA-DB-5277 
"AMP PEAK 11(19Q13.2) WILD-TYPE" "AMP PEAK 11(19Q13.2) WILD-TYPE" 
                    TCGA-DB-5278                     TCGA-DB-5279 
"AMP PEAK 11(19Q13.2) WILD-TYPE" "AMP PEAK 11(19Q13.2) WILD-TYPE" 
                    TCGA-DB-5280                     TCGA-DB-5281 
"AMP PEAK 11(19Q13.2) WILD-TYPE" "AMP PEAK 11(19Q13.2) WILD-TYPE" 
                    TCGA-DH-5140                     TCGA-DH-5141 
"AMP PEAK 11(19Q13.2) WILD-TYPE" "AMP PEAK 11(19Q13.2) WILD-TYPE" 
                    TCGA-DH-5142                     TCGA-DH-5143 
"AMP PEAK 11(19Q13.2) WILD-TYPE" "AMP PEAK 11(19Q13.2) WILD-TYPE" 
                    TCGA-DH-5144                     TCGA-DU-5847 
"AMP PEAK 11(19Q13.2) WILD-TYPE" "AMP PEAK 11(19Q13.2) WILD-TYPE" 
                    TCGA-DU-5849                     TCGA-DU-5851 
"AMP PEAK 11(19Q13.2) WILD-TYPE" "AMP PEAK 11(19Q13.2) WILD-TYPE" 
                    TCGA-DU-5852                     TCGA-DU-5853 
"AMP PEAK 11(19Q13.2) WILD-TYPE" "AMP PEAK 11(19Q13.2) WILD-TYPE" 
                    TCGA-DU-5854                     TCGA-DU-5855 
"AMP PEAK 11(19Q13.2) WILD-TYPE" "AMP PEAK 11(19Q13.2) WILD-TYPE" 
                    TCGA-DU-5870                     TCGA-DU-5871 
"AMP PEAK 11(19Q13.2) WILD-TYPE" "AMP PEAK 11(19Q13.2) WILD-TYPE" 
                    TCGA-DU-5872                     TCGA-DU-5874 
"AMP PEAK 11(19Q13.2) WILD-TYPE" "AMP PEAK 11(19Q13.2) WILD-TYPE" 
                    TCGA-DU-6392                     TCGA-DU-6393 
"AMP PEAK 11(19Q13.2) WILD-TYPE" "AMP PEAK 11(19Q13.2) WILD-TYPE" 
                    TCGA-DU-6394                     TCGA-DU-6395 
"AMP PEAK 11(19Q13.2) WILD-TYPE" "AMP PEAK 11(19Q13.2) WILD-TYPE" 
                    TCGA-DU-6396                     TCGA-DU-6397 
"AMP PEAK 11(19Q13.2) WILD-TYPE" "AMP PEAK 11(19Q13.2) WILD-TYPE" 
                    TCGA-DU-6399                     TCGA-DU-6400 
"AMP PEAK 11(19Q13.2) WILD-TYPE" "AMP PEAK 11(19Q13.2) WILD-TYPE" 
                    TCGA-DU-6401                     TCGA-DU-6402 
"AMP PEAK 11(19Q13.2) WILD-TYPE"   "AMP PEAK 11(19Q13.2) MUTATED" 
                    TCGA-DU-6403                     TCGA-DU-6404 
"AMP PEAK 11(19Q13.2) WILD-TYPE" "AMP PEAK 11(19Q13.2) WILD-TYPE" 
                    TCGA-DU-6405                     TCGA-DU-6406 
"AMP PEAK 11(19Q13.2) WILD-TYPE"   "AMP PEAK 11(19Q13.2) MUTATED" 
                    TCGA-DU-6407                     TCGA-DU-6408 
"AMP PEAK 11(19Q13.2) WILD-TYPE" "AMP PEAK 11(19Q13.2) WILD-TYPE" 
                    TCGA-DU-6410                     TCGA-DU-6542 
"AMP PEAK 11(19Q13.2) WILD-TYPE" "AMP PEAK 11(19Q13.2) WILD-TYPE" 
                    TCGA-DU-7006                     TCGA-DU-7007 
"AMP PEAK 11(19Q13.2) WILD-TYPE" "AMP PEAK 11(19Q13.2) WILD-TYPE" 
                    TCGA-DU-7008                     TCGA-DU-7009 
"AMP PEAK 11(19Q13.2) WILD-TYPE" "AMP PEAK 11(19Q13.2) WILD-TYPE" 
                    TCGA-DU-7010                     TCGA-DU-7011 
  "AMP PEAK 11(19Q13.2) MUTATED" "AMP PEAK 11(19Q13.2) WILD-TYPE" 
                    TCGA-DU-7012                     TCGA-DU-7013 
"AMP PEAK 11(19Q13.2) WILD-TYPE" "AMP PEAK 11(19Q13.2) WILD-TYPE" 
                    TCGA-DU-7014                     TCGA-DU-7015 
"AMP PEAK 11(19Q13.2) WILD-TYPE" "AMP PEAK 11(19Q13.2) WILD-TYPE" 
                    TCGA-DU-7018                     TCGA-DU-7019 
"AMP PEAK 11(19Q13.2) WILD-TYPE" "AMP PEAK 11(19Q13.2) WILD-TYPE" 
                    TCGA-DU-7290                     TCGA-DU-7292 
"AMP PEAK 11(19Q13.2) WILD-TYPE" "AMP PEAK 11(19Q13.2) WILD-TYPE" 
                    TCGA-DU-7294                     TCGA-DU-7298 
"AMP PEAK 11(19Q13.2) WILD-TYPE" "AMP PEAK 11(19Q13.2) WILD-TYPE" 
                    TCGA-DU-7299                     TCGA-DU-7300 
"AMP PEAK 11(19Q13.2) WILD-TYPE" "AMP PEAK 11(19Q13.2) WILD-TYPE" 
                    TCGA-DU-7301                     TCGA-DU-7302 
"AMP PEAK 11(19Q13.2) WILD-TYPE" "AMP PEAK 11(19Q13.2) WILD-TYPE" 
                    TCGA-DU-7304                     TCGA-DU-7306 
"AMP PEAK 11(19Q13.2) WILD-TYPE" "AMP PEAK 11(19Q13.2) WILD-TYPE" 
                    TCGA-DU-7309                     TCGA-E1-5302 
"AMP PEAK 11(19Q13.2) WILD-TYPE" "AMP PEAK 11(19Q13.2) WILD-TYPE" 
                    TCGA-E1-5303                     TCGA-E1-5304 
"AMP PEAK 11(19Q13.2) WILD-TYPE" "AMP PEAK 11(19Q13.2) WILD-TYPE" 
                    TCGA-E1-5305                     TCGA-E1-5307 
"AMP PEAK 11(19Q13.2) WILD-TYPE" "AMP PEAK 11(19Q13.2) WILD-TYPE" 
                    TCGA-E1-5311                     TCGA-E1-5318 
"AMP PEAK 11(19Q13.2) WILD-TYPE" "AMP PEAK 11(19Q13.2) WILD-TYPE" 
                    TCGA-E1-5319                     TCGA-E1-5322 
"AMP PEAK 11(19Q13.2) WILD-TYPE" "AMP PEAK 11(19Q13.2) WILD-TYPE" 
                    TCGA-EZ-7264                     TCGA-FG-5962 
"AMP PEAK 11(19Q13.2) WILD-TYPE" "AMP PEAK 11(19Q13.2) WILD-TYPE" 
                    TCGA-FG-5963                     TCGA-FG-5964 
"AMP PEAK 11(19Q13.2) WILD-TYPE" "AMP PEAK 11(19Q13.2) WILD-TYPE" 
                    TCGA-FG-5965                     TCGA-FG-6688 
"AMP PEAK 11(19Q13.2) WILD-TYPE" "AMP PEAK 11(19Q13.2) WILD-TYPE" 
                    TCGA-FG-6689                     TCGA-FG-6690 
"AMP PEAK 11(19Q13.2) WILD-TYPE" "AMP PEAK 11(19Q13.2) WILD-TYPE" 
                    TCGA-FG-6691                     TCGA-FG-6692 
"AMP PEAK 11(19Q13.2) WILD-TYPE"   "AMP PEAK 11(19Q13.2) MUTATED" 
                    TCGA-FG-7634                     TCGA-FG-7636 
"AMP PEAK 11(19Q13.2) WILD-TYPE" "AMP PEAK 11(19Q13.2) WILD-TYPE" 
                    TCGA-FG-7638                     TCGA-FG-7643 
"AMP PEAK 11(19Q13.2) WILD-TYPE"   "AMP PEAK 11(19Q13.2) MUTATED" 
                    TCGA-FN-7833                     TCGA-HT-7467 
"AMP PEAK 11(19Q13.2) WILD-TYPE" "AMP PEAK 11(19Q13.2) WILD-TYPE" 
                    TCGA-HT-7468                     TCGA-HT-7470 
"AMP PEAK 11(19Q13.2) WILD-TYPE" "AMP PEAK 11(19Q13.2) WILD-TYPE" 
                    TCGA-HT-7472                     TCGA-HT-7473 
  "AMP PEAK 11(19Q13.2) MUTATED" "AMP PEAK 11(19Q13.2) WILD-TYPE" 
                    TCGA-HT-7474                     TCGA-HT-7475 
"AMP PEAK 11(19Q13.2) WILD-TYPE" "AMP PEAK 11(19Q13.2) WILD-TYPE" 
                    TCGA-HT-7476                     TCGA-HT-7478 
"AMP PEAK 11(19Q13.2) WILD-TYPE" "AMP PEAK 11(19Q13.2) WILD-TYPE" 
                    TCGA-HT-7479                     TCGA-HT-7480 
"AMP PEAK 11(19Q13.2) WILD-TYPE" "AMP PEAK 11(19Q13.2) WILD-TYPE" 
                    TCGA-HT-7481                     TCGA-HT-7482 
"AMP PEAK 11(19Q13.2) WILD-TYPE" "AMP PEAK 11(19Q13.2) WILD-TYPE" 
                    TCGA-HT-7483                     TCGA-HT-7485 
"AMP PEAK 11(19Q13.2) WILD-TYPE" "AMP PEAK 11(19Q13.2) WILD-TYPE" 
                    TCGA-HT-7601                     TCGA-HT-7602 
"AMP PEAK 11(19Q13.2) WILD-TYPE" "AMP PEAK 11(19Q13.2) WILD-TYPE" 
                    TCGA-HT-7603                     TCGA-HT-7604 
"AMP PEAK 11(19Q13.2) WILD-TYPE" "AMP PEAK 11(19Q13.2) WILD-TYPE" 
                    TCGA-HT-7605                     TCGA-HT-7606 
"AMP PEAK 11(19Q13.2) WILD-TYPE" "AMP PEAK 11(19Q13.2) WILD-TYPE" 
                    TCGA-HT-7607                     TCGA-HT-7608 
"AMP PEAK 11(19Q13.2) WILD-TYPE" "AMP PEAK 11(19Q13.2) WILD-TYPE" 
                    TCGA-HT-7609                     TCGA-HT-7610 
"AMP PEAK 11(19Q13.2) WILD-TYPE" "AMP PEAK 11(19Q13.2) WILD-TYPE" 
                    TCGA-HW-7486                     TCGA-HW-7487 
"AMP PEAK 11(19Q13.2) WILD-TYPE" "AMP PEAK 11(19Q13.2) WILD-TYPE" 
                    TCGA-HW-7489                     TCGA-HW-7490 
"AMP PEAK 11(19Q13.2) WILD-TYPE" "AMP PEAK 11(19Q13.2) WILD-TYPE" 
                    TCGA-HW-7491                     TCGA-HW-7493 
"AMP PEAK 11(19Q13.2) WILD-TYPE" "AMP PEAK 11(19Q13.2) WILD-TYPE" 
                    TCGA-HW-7495                     TCGA-IK-7675 
"AMP PEAK 11(19Q13.2) WILD-TYPE" "AMP PEAK 11(19Q13.2) WILD-TYPE" 
                    TCGA-IK-8125 
"AMP PEAK 11(19Q13.2) WILD-TYPE" 
                    TCGA-CS-4938                     TCGA-CS-4941 
"AMP PEAK 11(19Q13.2) WILD-TYPE" "AMP PEAK 11(19Q13.2) WILD-TYPE" 
                    TCGA-CS-4942                     TCGA-CS-4943 
  "AMP PEAK 11(19Q13.2) MUTATED" "AMP PEAK 11(19Q13.2) WILD-TYPE" 
                    TCGA-CS-4944                     TCGA-CS-5390 
  "AMP PEAK 11(19Q13.2) MUTATED" "AMP PEAK 11(19Q13.2) WILD-TYPE" 
                    TCGA-CS-5393                     TCGA-CS-5394 
"AMP PEAK 11(19Q13.2) WILD-TYPE" "AMP PEAK 11(19Q13.2) WILD-TYPE" 
                    TCGA-CS-5395                     TCGA-CS-5396 
  "AMP PEAK 11(19Q13.2) MUTATED" "AMP PEAK 11(19Q13.2) WILD-TYPE" 
                    TCGA-CS-5397                     TCGA-CS-6186 
"AMP PEAK 11(19Q13.2) WILD-TYPE"   "AMP PEAK 11(19Q13.2) MUTATED" 
                    TCGA-CS-6188                     TCGA-CS-6290 
  "AMP PEAK 11(19Q13.2) MUTATED" "AMP PEAK 11(19Q13.2) WILD-TYPE" 
                    TCGA-CS-6665                     TCGA-CS-6666 
"AMP PEAK 11(19Q13.2) WILD-TYPE" "AMP PEAK 11(19Q13.2) WILD-TYPE" 
                    TCGA-CS-6667                     TCGA-CS-6668 
"AMP PEAK 11(19Q13.2) WILD-TYPE" "AMP PEAK 11(19Q13.2) WILD-TYPE" 
                    TCGA-CS-6669                     TCGA-CS-6670 
"AMP PEAK 11(19Q13.2) WILD-TYPE" "AMP PEAK 11(19Q13.2) WILD-TYPE" 
                    TCGA-DB-5270                     TCGA-DB-5273 
"AMP PEAK 11(19Q13.2) WILD-TYPE" "AMP PEAK 11(19Q13.2) WILD-TYPE" 
                    TCGA-DB-5274                     TCGA-DB-5275 
"AMP PEAK 11(19Q13.2) WILD-TYPE" "AMP PEAK 11(19Q13.2) WILD-TYPE" 
                    TCGA-DB-5276                     TCGA-DB-5277 
"AMP PEAK 11(19Q13.2) WILD-TYPE" "AMP PEAK 11(19Q13.2) WILD-TYPE" 
                    TCGA-DB-5278                     TCGA-DB-5279 
"AMP PEAK 11(19Q13.2) WILD-TYPE" "AMP PEAK 11(19Q13.2) WILD-TYPE" 
                    TCGA-DB-5280                     TCGA-DB-5281 
"AMP PEAK 11(19Q13.2) WILD-TYPE" "AMP PEAK 11(19Q13.2) WILD-TYPE" 
                    TCGA-DH-5140                     TCGA-DH-5141 
"AMP PEAK 11(19Q13.2) WILD-TYPE" "AMP PEAK 11(19Q13.2) WILD-TYPE" 
                    TCGA-DH-5142                     TCGA-DH-5143 
"AMP PEAK 11(19Q13.2) WILD-TYPE" "AMP PEAK 11(19Q13.2) WILD-TYPE" 
                    TCGA-DH-5144                     TCGA-DU-5847 
"AMP PEAK 11(19Q13.2) WILD-TYPE" "AMP PEAK 11(19Q13.2) WILD-TYPE" 
                    TCGA-DU-5849                     TCGA-DU-5851 
"AMP PEAK 11(19Q13.2) WILD-TYPE" "AMP PEAK 11(19Q13.2) WILD-TYPE" 
                    TCGA-DU-5852                     TCGA-DU-5853 
"AMP PEAK 11(19Q13.2) WILD-TYPE" "AMP PEAK 11(19Q13.2) WILD-TYPE" 
                    TCGA-DU-5854                     TCGA-DU-5855 
"AMP PEAK 11(19Q13.2) WILD-TYPE" "AMP PEAK 11(19Q13.2) WILD-TYPE" 
                    TCGA-DU-5870                     TCGA-DU-5871 
"AMP PEAK 11(19Q13.2) WILD-TYPE" "AMP PEAK 11(19Q13.2) WILD-TYPE" 
                    TCGA-DU-5872                     TCGA-DU-5874 
"AMP PEAK 11(19Q13.2) WILD-TYPE" "AMP PEAK 11(19Q13.2) WILD-TYPE" 
                    TCGA-DU-6392                     TCGA-DU-6393 
"AMP PEAK 11(19Q13.2) WILD-TYPE" "AMP PEAK 11(19Q13.2) WILD-TYPE" 
                    TCGA-DU-6394                     TCGA-DU-6395 
"AMP PEAK 11(19Q13.2) WILD-TYPE" "AMP PEAK 11(19Q13.2) WILD-TYPE" 
                    TCGA-DU-6396                     TCGA-DU-6397 
"AMP PEAK 11(19Q13.2) WILD-TYPE" "AMP PEAK 11(19Q13.2) WILD-TYPE" 
                    TCGA-DU-6399                     TCGA-DU-6400 
"AMP PEAK 11(19Q13.2) WILD-TYPE" "AMP PEAK 11(19Q13.2) WILD-TYPE" 
                    TCGA-DU-6401                     TCGA-DU-6402 
"AMP PEAK 11(19Q13.2) WILD-TYPE"   "AMP PEAK 11(19Q13.2) MUTATED" 
                    TCGA-DU-6403                     TCGA-DU-6404 
"AMP PEAK 11(19Q13.2) WILD-TYPE" "AMP PEAK 11(19Q13.2) WILD-TYPE" 
                    TCGA-DU-6405                     TCGA-DU-6406 
"AMP PEAK 11(19Q13.2) WILD-TYPE"   "AMP PEAK 11(19Q13.2) MUTATED" 
                    TCGA-DU-6407                     TCGA-DU-6408 
"AMP PEAK 11(19Q13.2) WILD-TYPE" "AMP PEAK 11(19Q13.2) WILD-TYPE" 
                    TCGA-DU-6410                     TCGA-DU-6542 
"AMP PEAK 11(19Q13.2) WILD-TYPE" "AMP PEAK 11(19Q13.2) WILD-TYPE" 
                    TCGA-DU-7006                     TCGA-DU-7007 
"AMP PEAK 11(19Q13.2) WILD-TYPE" "AMP PEAK 11(19Q13.2) WILD-TYPE" 
                    TCGA-DU-7008                     TCGA-DU-7009 
"AMP PEAK 11(19Q13.2) WILD-TYPE" "AMP PEAK 11(19Q13.2) WILD-TYPE" 
                    TCGA-DU-7010                     TCGA-DU-7011 
  "AMP PEAK 11(19Q13.2) MUTATED" "AMP PEAK 11(19Q13.2) WILD-TYPE" 
                    TCGA-DU-7012                     TCGA-DU-7013 
"AMP PEAK 11(19Q13.2) WILD-TYPE" "AMP PEAK 11(19Q13.2) WILD-TYPE" 
                    TCGA-DU-7014                     TCGA-DU-7015 
"AMP PEAK 11(19Q13.2) WILD-TYPE" "AMP PEAK 11(19Q13.2) WILD-TYPE" 
                    TCGA-DU-7018                     TCGA-DU-7019 
"AMP PEAK 11(19Q13.2) WILD-TYPE" "AMP PEAK 11(19Q13.2) WILD-TYPE" 
                    TCGA-DU-7290                     TCGA-DU-7292 
"AMP PEAK 11(19Q13.2) WILD-TYPE" "AMP PEAK 11(19Q13.2) WILD-TYPE" 
                    TCGA-DU-7294                     TCGA-DU-7298 
"AMP PEAK 11(19Q13.2) WILD-TYPE" "AMP PEAK 11(19Q13.2) WILD-TYPE" 
                    TCGA-DU-7299                     TCGA-DU-7300 
"AMP PEAK 11(19Q13.2) WILD-TYPE" "AMP PEAK 11(19Q13.2) WILD-TYPE" 
                    TCGA-DU-7301                     TCGA-DU-7302 
"AMP PEAK 11(19Q13.2) WILD-TYPE" "AMP PEAK 11(19Q13.2) WILD-TYPE" 
                    TCGA-DU-7304                     TCGA-DU-7306 
"AMP PEAK 11(19Q13.2) WILD-TYPE" "AMP PEAK 11(19Q13.2) WILD-TYPE" 
                    TCGA-DU-7309                     TCGA-E1-5302 
"AMP PEAK 11(19Q13.2) WILD-TYPE" "AMP PEAK 11(19Q13.2) WILD-TYPE" 
                    TCGA-E1-5303                     TCGA-E1-5304 
"AMP PEAK 11(19Q13.2) WILD-TYPE" "AMP PEAK 11(19Q13.2) WILD-TYPE" 
                    TCGA-E1-5305                     TCGA-E1-5307 
"AMP PEAK 11(19Q13.2) WILD-TYPE" "AMP PEAK 11(19Q13.2) WILD-TYPE" 
                    TCGA-E1-5311                     TCGA-E1-5318 
"AMP PEAK 11(19Q13.2) WILD-TYPE" "AMP PEAK 11(19Q13.2) WILD-TYPE" 
                    TCGA-E1-5319                     TCGA-E1-5322 
"AMP PEAK 11(19Q13.2) WILD-TYPE" "AMP PEAK 11(19Q13.2) WILD-TYPE" 
                    TCGA-EZ-7264                     TCGA-FG-5962 
"AMP PEAK 11(19Q13.2) WILD-TYPE" "AMP PEAK 11(19Q13.2) WILD-TYPE" 
                    TCGA-FG-5963                     TCGA-FG-5964 
"AMP PEAK 11(19Q13.2) WILD-TYPE" "AMP PEAK 11(19Q13.2) WILD-TYPE" 
                    TCGA-FG-5965                     TCGA-FG-6688 
"AMP PEAK 11(19Q13.2) WILD-TYPE" "AMP PEAK 11(19Q13.2) WILD-TYPE" 
                    TCGA-FG-6689                     TCGA-FG-6690 
"AMP PEAK 11(19Q13.2) WILD-TYPE" "AMP PEAK 11(19Q13.2) WILD-TYPE" 
                    TCGA-FG-6691                     TCGA-FG-6692 
"AMP PEAK 11(19Q13.2) WILD-TYPE"   "AMP PEAK 11(19Q13.2) MUTATED" 
                    TCGA-FG-7634                     TCGA-FG-7636 
"AMP PEAK 11(19Q13.2) WILD-TYPE" "AMP PEAK 11(19Q13.2) WILD-TYPE" 
                    TCGA-FG-7638                     TCGA-FG-7643 
"AMP PEAK 11(19Q13.2) WILD-TYPE"   "AMP PEAK 11(19Q13.2) MUTATED" 
                    TCGA-FN-7833                     TCGA-HT-7467 
"AMP PEAK 11(19Q13.2) WILD-TYPE" "AMP PEAK 11(19Q13.2) WILD-TYPE" 
                    TCGA-HT-7468                     TCGA-HT-7470 
"AMP PEAK 11(19Q13.2) WILD-TYPE" "AMP PEAK 11(19Q13.2) WILD-TYPE" 
                    TCGA-HT-7472                     TCGA-HT-7473 
  "AMP PEAK 11(19Q13.2) MUTATED" "AMP PEAK 11(19Q13.2) WILD-TYPE" 
                    TCGA-HT-7474                     TCGA-HT-7475 
"AMP PEAK 11(19Q13.2) WILD-TYPE" "AMP PEAK 11(19Q13.2) WILD-TYPE" 
                    TCGA-HT-7476                     TCGA-HT-7478 
"AMP PEAK 11(19Q13.2) WILD-TYPE" "AMP PEAK 11(19Q13.2) WILD-TYPE" 
                    TCGA-HT-7479                     TCGA-HT-7480 
"AMP PEAK 11(19Q13.2) WILD-TYPE" "AMP PEAK 11(19Q13.2) WILD-TYPE" 
                    TCGA-HT-7481                     TCGA-HT-7482 
"AMP PEAK 11(19Q13.2) WILD-TYPE" "AMP PEAK 11(19Q13.2) WILD-TYPE" 
                    TCGA-HT-7483                     TCGA-HT-7485 
"AMP PEAK 11(19Q13.2) WILD-TYPE" "AMP PEAK 11(19Q13.2) WILD-TYPE" 
                    TCGA-HT-7601                     TCGA-HT-7602 
"AMP PEAK 11(19Q13.2) WILD-TYPE" "AMP PEAK 11(19Q13.2) WILD-TYPE" 
                    TCGA-HT-7603                     TCGA-HT-7604 
"AMP PEAK 11(19Q13.2) WILD-TYPE" "AMP PEAK 11(19Q13.2) WILD-TYPE" 
                    TCGA-HT-7605                     TCGA-HT-7606 
"AMP PEAK 11(19Q13.2) WILD-TYPE" "AMP PEAK 11(19Q13.2) WILD-TYPE" 
                    TCGA-HT-7607                     TCGA-HT-7608 
"AMP PEAK 11(19Q13.2) WILD-TYPE" "AMP PEAK 11(19Q13.2) WILD-TYPE" 
                    TCGA-HT-7609                     TCGA-HT-7610 
"AMP PEAK 11(19Q13.2) WILD-TYPE" "AMP PEAK 11(19Q13.2) WILD-TYPE" 
                    TCGA-HW-7486                     TCGA-HW-7487 
"AMP PEAK 11(19Q13.2) WILD-TYPE" "AMP PEAK 11(19Q13.2) WILD-TYPE" 
                    TCGA-HW-7489                     TCGA-HW-7490 
"AMP PEAK 11(19Q13.2) WILD-TYPE" "AMP PEAK 11(19Q13.2) WILD-TYPE" 
                    TCGA-HW-7491                     TCGA-HW-7493 
"AMP PEAK 11(19Q13.2) WILD-TYPE" "AMP PEAK 11(19Q13.2) WILD-TYPE" 
                    TCGA-HW-7495                     TCGA-IK-7675 
"AMP PEAK 11(19Q13.2) WILD-TYPE" "AMP PEAK 11(19Q13.2) WILD-TYPE" 
                    TCGA-IK-8125 
"AMP PEAK 11(19Q13.2) WILD-TYPE" 
[1] "hr=" "5.5"
D11V2, continuous
D11V3, binary
[1] "tbl2"
                                cls
clus                             [,1] [,2]
  AMP PEAK 11(19Q13.2) MUTATED      4    7
  AMP PEAK 11(19Q13.2) WILD-TYPE   58   76
        clus
vv       AMP PEAK 11(19Q13.2) MUTATED AMP PEAK 11(19Q13.2) WILD-TYPE
  FEMALE                            4                             58
  MALE                              7                             76
D11V4, continuous
D11V5, multiclass
                   clus
vv                  AMP PEAK 11(19Q13.2) MUTATED AMP PEAK 11(19Q13.2) WILD-TYPE
  ASTROCYTOMA                                  5                             45
  OLIGOASTROCYTOMA                             3                             33
  OLIGODENDROGLIOMA                            3                             55
D11V6, binary
[1] "tbl2"
                                cls
clus                             [,1] [,2]
  AMP PEAK 11(19Q13.2) MUTATED      3    8
  AMP PEAK 11(19Q13.2) WILD-TYPE   56   78
     clus
vv    AMP PEAK 11(19Q13.2) MUTATED AMP PEAK 11(19Q13.2) WILD-TYPE
  NO                             8                             78
  YES                            3                             56
D11V7, binary
[1] "tbl2"
                                cls
clus                             [,1] [,2]
  AMP PEAK 11(19Q13.2) MUTATED      8    3
  AMP PEAK 11(19Q13.2) WILD-TYPE   66   68
     clus
vv    AMP PEAK 11(19Q13.2) MUTATED AMP PEAK 11(19Q13.2) WILD-TYPE
  NO                             3                             68
  YES                            8                             66

Clustering(12) Variable = Amp Peak 12(Xp22.33) mutation analysis
D12V1, survival
                    TCGA-CS-4938                     TCGA-CS-4941 
"AMP PEAK 12(XP22.33) WILD-TYPE" "AMP PEAK 12(XP22.33) WILD-TYPE" 
                    TCGA-CS-4942                     TCGA-CS-4943 
"AMP PEAK 12(XP22.33) WILD-TYPE" "AMP PEAK 12(XP22.33) WILD-TYPE" 
                    TCGA-CS-4944                     TCGA-CS-5390 
"AMP PEAK 12(XP22.33) WILD-TYPE" "AMP PEAK 12(XP22.33) WILD-TYPE" 
                    TCGA-CS-5393                     TCGA-CS-5394 
"AMP PEAK 12(XP22.33) WILD-TYPE" "AMP PEAK 12(XP22.33) WILD-TYPE" 
                    TCGA-CS-5395                     TCGA-CS-5396 
"AMP PEAK 12(XP22.33) WILD-TYPE" "AMP PEAK 12(XP22.33) WILD-TYPE" 
                    TCGA-CS-5397                     TCGA-CS-6186 
"AMP PEAK 12(XP22.33) WILD-TYPE" "AMP PEAK 12(XP22.33) WILD-TYPE" 
                    TCGA-CS-6188                     TCGA-CS-6290 
"AMP PEAK 12(XP22.33) WILD-TYPE" "AMP PEAK 12(XP22.33) WILD-TYPE" 
                    TCGA-CS-6665                     TCGA-CS-6666 
  "AMP PEAK 12(XP22.33) MUTATED" "AMP PEAK 12(XP22.33) WILD-TYPE" 
                    TCGA-CS-6667                     TCGA-CS-6668 
  "AMP PEAK 12(XP22.33) MUTATED" "AMP PEAK 12(XP22.33) WILD-TYPE" 
                    TCGA-CS-6669                     TCGA-CS-6670 
"AMP PEAK 12(XP22.33) WILD-TYPE" "AMP PEAK 12(XP22.33) WILD-TYPE" 
                    TCGA-DB-5270                     TCGA-DB-5273 
"AMP PEAK 12(XP22.33) WILD-TYPE" "AMP PEAK 12(XP22.33) WILD-TYPE" 
                    TCGA-DB-5274                     TCGA-DB-5275 
"AMP PEAK 12(XP22.33) WILD-TYPE" "AMP PEAK 12(XP22.33) WILD-TYPE" 
                    TCGA-DB-5276                     TCGA-DB-5277 
"AMP PEAK 12(XP22.33) WILD-TYPE"   "AMP PEAK 12(XP22.33) MUTATED" 
                    TCGA-DB-5278                     TCGA-DB-5279 
"AMP PEAK 12(XP22.33) WILD-TYPE" "AMP PEAK 12(XP22.33) WILD-TYPE" 
                    TCGA-DB-5280                     TCGA-DB-5281 
"AMP PEAK 12(XP22.33) WILD-TYPE" "AMP PEAK 12(XP22.33) WILD-TYPE" 
                    TCGA-DH-5140                     TCGA-DH-5141 
"AMP PEAK 12(XP22.33) WILD-TYPE" "AMP PEAK 12(XP22.33) WILD-TYPE" 
                    TCGA-DH-5142                     TCGA-DH-5143 
"AMP PEAK 12(XP22.33) WILD-TYPE" "AMP PEAK 12(XP22.33) WILD-TYPE" 
                    TCGA-DH-5144                     TCGA-DU-5847 
"AMP PEAK 12(XP22.33) WILD-TYPE" "AMP PEAK 12(XP22.33) WILD-TYPE" 
                    TCGA-DU-5849                     TCGA-DU-5851 
"AMP PEAK 12(XP22.33) WILD-TYPE" "AMP PEAK 12(XP22.33) WILD-TYPE" 
                    TCGA-DU-5852                     TCGA-DU-5853 
"AMP PEAK 12(XP22.33) WILD-TYPE" "AMP PEAK 12(XP22.33) WILD-TYPE" 
                    TCGA-DU-5854                     TCGA-DU-5855 
"AMP PEAK 12(XP22.33) WILD-TYPE" "AMP PEAK 12(XP22.33) WILD-TYPE" 
                    TCGA-DU-5870                     TCGA-DU-5871 
"AMP PEAK 12(XP22.33) WILD-TYPE" "AMP PEAK 12(XP22.33) WILD-TYPE" 
                    TCGA-DU-5872                     TCGA-DU-5874 
"AMP PEAK 12(XP22.33) WILD-TYPE" "AMP PEAK 12(XP22.33) WILD-TYPE" 
                    TCGA-DU-6392                     TCGA-DU-6393 
"AMP PEAK 12(XP22.33) WILD-TYPE" "AMP PEAK 12(XP22.33) WILD-TYPE" 
                    TCGA-DU-6394                     TCGA-DU-6395 
"AMP PEAK 12(XP22.33) WILD-TYPE" "AMP PEAK 12(XP22.33) WILD-TYPE" 
                    TCGA-DU-6396                     TCGA-DU-6397 
"AMP PEAK 12(XP22.33) WILD-TYPE" "AMP PEAK 12(XP22.33) WILD-TYPE" 
                    TCGA-DU-6399                     TCGA-DU-6400 
"AMP PEAK 12(XP22.33) WILD-TYPE" "AMP PEAK 12(XP22.33) WILD-TYPE" 
                    TCGA-DU-6401                     TCGA-DU-6402 
"AMP PEAK 12(XP22.33) WILD-TYPE" "AMP PEAK 12(XP22.33) WILD-TYPE" 
                    TCGA-DU-6403                     TCGA-DU-6404 
"AMP PEAK 12(XP22.33) WILD-TYPE"   "AMP PEAK 12(XP22.33) MUTATED" 
                    TCGA-DU-6405                     TCGA-DU-6406 
"AMP PEAK 12(XP22.33) WILD-TYPE" "AMP PEAK 12(XP22.33) WILD-TYPE" 
                    TCGA-DU-6407                     TCGA-DU-6408 
"AMP PEAK 12(XP22.33) WILD-TYPE" "AMP PEAK 12(XP22.33) WILD-TYPE" 
                    TCGA-DU-6410                     TCGA-DU-6542 
"AMP PEAK 12(XP22.33) WILD-TYPE" "AMP PEAK 12(XP22.33) WILD-TYPE" 
                    TCGA-DU-7006                     TCGA-DU-7007 
"AMP PEAK 12(XP22.33) WILD-TYPE" "AMP PEAK 12(XP22.33) WILD-TYPE" 
                    TCGA-DU-7008                     TCGA-DU-7009 
"AMP PEAK 12(XP22.33) WILD-TYPE" "AMP PEAK 12(XP22.33) WILD-TYPE" 
                    TCGA-DU-7010                     TCGA-DU-7011 
  "AMP PEAK 12(XP22.33) MUTATED" "AMP PEAK 12(XP22.33) WILD-TYPE" 
                    TCGA-DU-7012                     TCGA-DU-7013 
"AMP PEAK 12(XP22.33) WILD-TYPE"   "AMP PEAK 12(XP22.33) MUTATED" 
                    TCGA-DU-7014                     TCGA-DU-7015 
"AMP PEAK 12(XP22.33) WILD-TYPE" "AMP PEAK 12(XP22.33) WILD-TYPE" 
                    TCGA-DU-7018                     TCGA-DU-7019 
"AMP PEAK 12(XP22.33) WILD-TYPE" "AMP PEAK 12(XP22.33) WILD-TYPE" 
                    TCGA-DU-7290                     TCGA-DU-7292 
"AMP PEAK 12(XP22.33) WILD-TYPE" "AMP PEAK 12(XP22.33) WILD-TYPE" 
                    TCGA-DU-7294                     TCGA-DU-7298 
"AMP PEAK 12(XP22.33) WILD-TYPE" "AMP PEAK 12(XP22.33) WILD-TYPE" 
                    TCGA-DU-7299                     TCGA-DU-7300 
  "AMP PEAK 12(XP22.33) MUTATED" "AMP PEAK 12(XP22.33) WILD-TYPE" 
                    TCGA-DU-7301                     TCGA-DU-7302 
"AMP PEAK 12(XP22.33) WILD-TYPE" "AMP PEAK 12(XP22.33) WILD-TYPE" 
                    TCGA-DU-7304                     TCGA-DU-7306 
  "AMP PEAK 12(XP22.33) MUTATED" "AMP PEAK 12(XP22.33) WILD-TYPE" 
                    TCGA-DU-7309                     TCGA-E1-5302 
"AMP PEAK 12(XP22.33) WILD-TYPE"   "AMP PEAK 12(XP22.33) MUTATED" 
                    TCGA-E1-5303                     TCGA-E1-5304 
"AMP PEAK 12(XP22.33) WILD-TYPE" "AMP PEAK 12(XP22.33) WILD-TYPE" 
                    TCGA-E1-5305                     TCGA-E1-5307 
"AMP PEAK 12(XP22.33) WILD-TYPE" "AMP PEAK 12(XP22.33) WILD-TYPE" 
                    TCGA-E1-5311                     TCGA-E1-5318 
"AMP PEAK 12(XP22.33) WILD-TYPE" "AMP PEAK 12(XP22.33) WILD-TYPE" 
                    TCGA-E1-5319                     TCGA-E1-5322 
"AMP PEAK 12(XP22.33) WILD-TYPE" "AMP PEAK 12(XP22.33) WILD-TYPE" 
                    TCGA-EZ-7264                     TCGA-FG-5962 
"AMP PEAK 12(XP22.33) WILD-TYPE" "AMP PEAK 12(XP22.33) WILD-TYPE" 
                    TCGA-FG-5963                     TCGA-FG-5964 
"AMP PEAK 12(XP22.33) WILD-TYPE" "AMP PEAK 12(XP22.33) WILD-TYPE" 
                    TCGA-FG-5965                     TCGA-FG-6688 
"AMP PEAK 12(XP22.33) WILD-TYPE" "AMP PEAK 12(XP22.33) WILD-TYPE" 
                    TCGA-FG-6689                     TCGA-FG-6690 
"AMP PEAK 12(XP22.33) WILD-TYPE" "AMP PEAK 12(XP22.33) WILD-TYPE" 
                    TCGA-FG-6691                     TCGA-FG-6692 
"AMP PEAK 12(XP22.33) WILD-TYPE" "AMP PEAK 12(XP22.33) WILD-TYPE" 
                    TCGA-FG-7634                     TCGA-FG-7636 
"AMP PEAK 12(XP22.33) WILD-TYPE" "AMP PEAK 12(XP22.33) WILD-TYPE" 
                    TCGA-FG-7638                     TCGA-FG-7643 
"AMP PEAK 12(XP22.33) WILD-TYPE" "AMP PEAK 12(XP22.33) WILD-TYPE" 
                    TCGA-FN-7833                     TCGA-HT-7467 
"AMP PEAK 12(XP22.33) WILD-TYPE" "AMP PEAK 12(XP22.33) WILD-TYPE" 
                    TCGA-HT-7468                     TCGA-HT-7470 
"AMP PEAK 12(XP22.33) WILD-TYPE" "AMP PEAK 12(XP22.33) WILD-TYPE" 
                    TCGA-HT-7472                     TCGA-HT-7473 
"AMP PEAK 12(XP22.33) WILD-TYPE"   "AMP PEAK 12(XP22.33) MUTATED" 
                    TCGA-HT-7474                     TCGA-HT-7475 
"AMP PEAK 12(XP22.33) WILD-TYPE" "AMP PEAK 12(XP22.33) WILD-TYPE" 
                    TCGA-HT-7476                     TCGA-HT-7478 
"AMP PEAK 12(XP22.33) WILD-TYPE" "AMP PEAK 12(XP22.33) WILD-TYPE" 
                    TCGA-HT-7479                     TCGA-HT-7480 
"AMP PEAK 12(XP22.33) WILD-TYPE" "AMP PEAK 12(XP22.33) WILD-TYPE" 
                    TCGA-HT-7481                     TCGA-HT-7482 
"AMP PEAK 12(XP22.33) WILD-TYPE" "AMP PEAK 12(XP22.33) WILD-TYPE" 
                    TCGA-HT-7483                     TCGA-HT-7485 
"AMP PEAK 12(XP22.33) WILD-TYPE" "AMP PEAK 12(XP22.33) WILD-TYPE" 
                    TCGA-HT-7601                     TCGA-HT-7602 
"AMP PEAK 12(XP22.33) WILD-TYPE" "AMP PEAK 12(XP22.33) WILD-TYPE" 
                    TCGA-HT-7603                     TCGA-HT-7604 
"AMP PEAK 12(XP22.33) WILD-TYPE"   "AMP PEAK 12(XP22.33) MUTATED" 
                    TCGA-HT-7605                     TCGA-HT-7606 
"AMP PEAK 12(XP22.33) WILD-TYPE" "AMP PEAK 12(XP22.33) WILD-TYPE" 
                    TCGA-HT-7607                     TCGA-HT-7608 
"AMP PEAK 12(XP22.33) WILD-TYPE" "AMP PEAK 12(XP22.33) WILD-TYPE" 
                    TCGA-HT-7609                     TCGA-HT-7610 
"AMP PEAK 12(XP22.33) WILD-TYPE" "AMP PEAK 12(XP22.33) WILD-TYPE" 
                    TCGA-HW-7486                     TCGA-HW-7487 
"AMP PEAK 12(XP22.33) WILD-TYPE" "AMP PEAK 12(XP22.33) WILD-TYPE" 
                    TCGA-HW-7489                     TCGA-HW-7490 
"AMP PEAK 12(XP22.33) WILD-TYPE" "AMP PEAK 12(XP22.33) WILD-TYPE" 
                    TCGA-HW-7491                     TCGA-HW-7493 
"AMP PEAK 12(XP22.33) WILD-TYPE"   "AMP PEAK 12(XP22.33) MUTATED" 
                    TCGA-HW-7495                     TCGA-IK-7675 
"AMP PEAK 12(XP22.33) WILD-TYPE" "AMP PEAK 12(XP22.33) WILD-TYPE" 
                    TCGA-IK-8125 
"AMP PEAK 12(XP22.33) WILD-TYPE" 
                    TCGA-CS-4938                     TCGA-CS-4941 
"AMP PEAK 12(XP22.33) WILD-TYPE" "AMP PEAK 12(XP22.33) WILD-TYPE" 
                    TCGA-CS-4942                     TCGA-CS-4943 
"AMP PEAK 12(XP22.33) WILD-TYPE" "AMP PEAK 12(XP22.33) WILD-TYPE" 
                    TCGA-CS-4944                     TCGA-CS-5390 
"AMP PEAK 12(XP22.33) WILD-TYPE" "AMP PEAK 12(XP22.33) WILD-TYPE" 
                    TCGA-CS-5393                     TCGA-CS-5394 
"AMP PEAK 12(XP22.33) WILD-TYPE" "AMP PEAK 12(XP22.33) WILD-TYPE" 
                    TCGA-CS-5395                     TCGA-CS-5396 
"AMP PEAK 12(XP22.33) WILD-TYPE" "AMP PEAK 12(XP22.33) WILD-TYPE" 
                    TCGA-CS-5397                     TCGA-CS-6186 
"AMP PEAK 12(XP22.33) WILD-TYPE" "AMP PEAK 12(XP22.33) WILD-TYPE" 
                    TCGA-CS-6188                     TCGA-CS-6290 
"AMP PEAK 12(XP22.33) WILD-TYPE" "AMP PEAK 12(XP22.33) WILD-TYPE" 
                    TCGA-CS-6665                     TCGA-CS-6666 
  "AMP PEAK 12(XP22.33) MUTATED" "AMP PEAK 12(XP22.33) WILD-TYPE" 
                    TCGA-CS-6667                     TCGA-CS-6668 
  "AMP PEAK 12(XP22.33) MUTATED" "AMP PEAK 12(XP22.33) WILD-TYPE" 
                    TCGA-CS-6669                     TCGA-CS-6670 
"AMP PEAK 12(XP22.33) WILD-TYPE" "AMP PEAK 12(XP22.33) WILD-TYPE" 
                    TCGA-DB-5270                     TCGA-DB-5273 
"AMP PEAK 12(XP22.33) WILD-TYPE" "AMP PEAK 12(XP22.33) WILD-TYPE" 
                    TCGA-DB-5274                     TCGA-DB-5275 
"AMP PEAK 12(XP22.33) WILD-TYPE" "AMP PEAK 12(XP22.33) WILD-TYPE" 
                    TCGA-DB-5276                     TCGA-DB-5277 
"AMP PEAK 12(XP22.33) WILD-TYPE"   "AMP PEAK 12(XP22.33) MUTATED" 
                    TCGA-DB-5278                     TCGA-DB-5279 
"AMP PEAK 12(XP22.33) WILD-TYPE" "AMP PEAK 12(XP22.33) WILD-TYPE" 
                    TCGA-DB-5280                     TCGA-DB-5281 
"AMP PEAK 12(XP22.33) WILD-TYPE" "AMP PEAK 12(XP22.33) WILD-TYPE" 
                    TCGA-DH-5140                     TCGA-DH-5141 
"AMP PEAK 12(XP22.33) WILD-TYPE" "AMP PEAK 12(XP22.33) WILD-TYPE" 
                    TCGA-DH-5142                     TCGA-DH-5143 
"AMP PEAK 12(XP22.33) WILD-TYPE" "AMP PEAK 12(XP22.33) WILD-TYPE" 
                    TCGA-DH-5144                     TCGA-DU-5847 
"AMP PEAK 12(XP22.33) WILD-TYPE" "AMP PEAK 12(XP22.33) WILD-TYPE" 
                    TCGA-DU-5849                     TCGA-DU-5851 
"AMP PEAK 12(XP22.33) WILD-TYPE" "AMP PEAK 12(XP22.33) WILD-TYPE" 
                    TCGA-DU-5852                     TCGA-DU-5853 
"AMP PEAK 12(XP22.33) WILD-TYPE" "AMP PEAK 12(XP22.33) WILD-TYPE" 
                    TCGA-DU-5854                     TCGA-DU-5855 
"AMP PEAK 12(XP22.33) WILD-TYPE" "AMP PEAK 12(XP22.33) WILD-TYPE" 
                    TCGA-DU-5870                     TCGA-DU-5871 
"AMP PEAK 12(XP22.33) WILD-TYPE" "AMP PEAK 12(XP22.33) WILD-TYPE" 
                    TCGA-DU-5872                     TCGA-DU-5874 
"AMP PEAK 12(XP22.33) WILD-TYPE" "AMP PEAK 12(XP22.33) WILD-TYPE" 
                    TCGA-DU-6392                     TCGA-DU-6393 
"AMP PEAK 12(XP22.33) WILD-TYPE" "AMP PEAK 12(XP22.33) WILD-TYPE" 
                    TCGA-DU-6394                     TCGA-DU-6395 
"AMP PEAK 12(XP22.33) WILD-TYPE" "AMP PEAK 12(XP22.33) WILD-TYPE" 
                    TCGA-DU-6396                     TCGA-DU-6397 
"AMP PEAK 12(XP22.33) WILD-TYPE" "AMP PEAK 12(XP22.33) WILD-TYPE" 
                    TCGA-DU-6399                     TCGA-DU-6400 
"AMP PEAK 12(XP22.33) WILD-TYPE" "AMP PEAK 12(XP22.33) WILD-TYPE" 
                    TCGA-DU-6401                     TCGA-DU-6402 
"AMP PEAK 12(XP22.33) WILD-TYPE" "AMP PEAK 12(XP22.33) WILD-TYPE" 
                    TCGA-DU-6403                     TCGA-DU-6404 
"AMP PEAK 12(XP22.33) WILD-TYPE"   "AMP PEAK 12(XP22.33) MUTATED" 
                    TCGA-DU-6405                     TCGA-DU-6406 
"AMP PEAK 12(XP22.33) WILD-TYPE" "AMP PEAK 12(XP22.33) WILD-TYPE" 
                    TCGA-DU-6407                     TCGA-DU-6408 
"AMP PEAK 12(XP22.33) WILD-TYPE" "AMP PEAK 12(XP22.33) WILD-TYPE" 
                    TCGA-DU-6410                     TCGA-DU-6542 
"AMP PEAK 12(XP22.33) WILD-TYPE" "AMP PEAK 12(XP22.33) WILD-TYPE" 
                    TCGA-DU-7006                     TCGA-DU-7007 
"AMP PEAK 12(XP22.33) WILD-TYPE" "AMP PEAK 12(XP22.33) WILD-TYPE" 
                    TCGA-DU-7008                     TCGA-DU-7009 
"AMP PEAK 12(XP22.33) WILD-TYPE" "AMP PEAK 12(XP22.33) WILD-TYPE" 
                    TCGA-DU-7010                     TCGA-DU-7011 
  "AMP PEAK 12(XP22.33) MUTATED" "AMP PEAK 12(XP22.33) WILD-TYPE" 
                    TCGA-DU-7012                     TCGA-DU-7013 
"AMP PEAK 12(XP22.33) WILD-TYPE"   "AMP PEAK 12(XP22.33) MUTATED" 
                    TCGA-DU-7014                     TCGA-DU-7015 
"AMP PEAK 12(XP22.33) WILD-TYPE" "AMP PEAK 12(XP22.33) WILD-TYPE" 
                    TCGA-DU-7018                     TCGA-DU-7019 
"AMP PEAK 12(XP22.33) WILD-TYPE" "AMP PEAK 12(XP22.33) WILD-TYPE" 
                    TCGA-DU-7290                     TCGA-DU-7292 
"AMP PEAK 12(XP22.33) WILD-TYPE" "AMP PEAK 12(XP22.33) WILD-TYPE" 
                    TCGA-DU-7294                     TCGA-DU-7298 
"AMP PEAK 12(XP22.33) WILD-TYPE" "AMP PEAK 12(XP22.33) WILD-TYPE" 
                    TCGA-DU-7299                     TCGA-DU-7300 
  "AMP PEAK 12(XP22.33) MUTATED" "AMP PEAK 12(XP22.33) WILD-TYPE" 
                    TCGA-DU-7301                     TCGA-DU-7302 
"AMP PEAK 12(XP22.33) WILD-TYPE" "AMP PEAK 12(XP22.33) WILD-TYPE" 
                    TCGA-DU-7304                     TCGA-DU-7306 
  "AMP PEAK 12(XP22.33) MUTATED" "AMP PEAK 12(XP22.33) WILD-TYPE" 
                    TCGA-DU-7309                     TCGA-E1-5302 
"AMP PEAK 12(XP22.33) WILD-TYPE"   "AMP PEAK 12(XP22.33) MUTATED" 
                    TCGA-E1-5303                     TCGA-E1-5304 
"AMP PEAK 12(XP22.33) WILD-TYPE" "AMP PEAK 12(XP22.33) WILD-TYPE" 
                    TCGA-E1-5305                     TCGA-E1-5307 
"AMP PEAK 12(XP22.33) WILD-TYPE" "AMP PEAK 12(XP22.33) WILD-TYPE" 
                    TCGA-E1-5311                     TCGA-E1-5318 
"AMP PEAK 12(XP22.33) WILD-TYPE" "AMP PEAK 12(XP22.33) WILD-TYPE" 
                    TCGA-E1-5319                     TCGA-E1-5322 
"AMP PEAK 12(XP22.33) WILD-TYPE" "AMP PEAK 12(XP22.33) WILD-TYPE" 
                    TCGA-EZ-7264                     TCGA-FG-5962 
"AMP PEAK 12(XP22.33) WILD-TYPE" "AMP PEAK 12(XP22.33) WILD-TYPE" 
                    TCGA-FG-5963                     TCGA-FG-5964 
"AMP PEAK 12(XP22.33) WILD-TYPE" "AMP PEAK 12(XP22.33) WILD-TYPE" 
                    TCGA-FG-5965                     TCGA-FG-6688 
"AMP PEAK 12(XP22.33) WILD-TYPE" "AMP PEAK 12(XP22.33) WILD-TYPE" 
                    TCGA-FG-6689                     TCGA-FG-6690 
"AMP PEAK 12(XP22.33) WILD-TYPE" "AMP PEAK 12(XP22.33) WILD-TYPE" 
                    TCGA-FG-6691                     TCGA-FG-6692 
"AMP PEAK 12(XP22.33) WILD-TYPE" "AMP PEAK 12(XP22.33) WILD-TYPE" 
                    TCGA-FG-7634                     TCGA-FG-7636 
"AMP PEAK 12(XP22.33) WILD-TYPE" "AMP PEAK 12(XP22.33) WILD-TYPE" 
                    TCGA-FG-7638                     TCGA-FG-7643 
"AMP PEAK 12(XP22.33) WILD-TYPE" "AMP PEAK 12(XP22.33) WILD-TYPE" 
                    TCGA-FN-7833                     TCGA-HT-7467 
"AMP PEAK 12(XP22.33) WILD-TYPE" "AMP PEAK 12(XP22.33) WILD-TYPE" 
                    TCGA-HT-7468                     TCGA-HT-7470 
"AMP PEAK 12(XP22.33) WILD-TYPE" "AMP PEAK 12(XP22.33) WILD-TYPE" 
                    TCGA-HT-7472                     TCGA-HT-7473 
"AMP PEAK 12(XP22.33) WILD-TYPE"   "AMP PEAK 12(XP22.33) MUTATED" 
                    TCGA-HT-7474                     TCGA-HT-7475 
"AMP PEAK 12(XP22.33) WILD-TYPE" "AMP PEAK 12(XP22.33) WILD-TYPE" 
                    TCGA-HT-7476                     TCGA-HT-7478 
"AMP PEAK 12(XP22.33) WILD-TYPE" "AMP PEAK 12(XP22.33) WILD-TYPE" 
                    TCGA-HT-7479                     TCGA-HT-7480 
"AMP PEAK 12(XP22.33) WILD-TYPE" "AMP PEAK 12(XP22.33) WILD-TYPE" 
                    TCGA-HT-7481                     TCGA-HT-7482 
"AMP PEAK 12(XP22.33) WILD-TYPE" "AMP PEAK 12(XP22.33) WILD-TYPE" 
                    TCGA-HT-7483                     TCGA-HT-7485 
"AMP PEAK 12(XP22.33) WILD-TYPE" "AMP PEAK 12(XP22.33) WILD-TYPE" 
                    TCGA-HT-7601                     TCGA-HT-7602 
"AMP PEAK 12(XP22.33) WILD-TYPE" "AMP PEAK 12(XP22.33) WILD-TYPE" 
                    TCGA-HT-7603                     TCGA-HT-7604 
"AMP PEAK 12(XP22.33) WILD-TYPE"   "AMP PEAK 12(XP22.33) MUTATED" 
                    TCGA-HT-7605                     TCGA-HT-7606 
"AMP PEAK 12(XP22.33) WILD-TYPE" "AMP PEAK 12(XP22.33) WILD-TYPE" 
                    TCGA-HT-7607                     TCGA-HT-7608 
"AMP PEAK 12(XP22.33) WILD-TYPE" "AMP PEAK 12(XP22.33) WILD-TYPE" 
                    TCGA-HT-7609                     TCGA-HT-7610 
"AMP PEAK 12(XP22.33) WILD-TYPE" "AMP PEAK 12(XP22.33) WILD-TYPE" 
                    TCGA-HW-7486                     TCGA-HW-7487 
"AMP PEAK 12(XP22.33) WILD-TYPE" "AMP PEAK 12(XP22.33) WILD-TYPE" 
                    TCGA-HW-7489                     TCGA-HW-7490 
"AMP PEAK 12(XP22.33) WILD-TYPE" "AMP PEAK 12(XP22.33) WILD-TYPE" 
                    TCGA-HW-7491                     TCGA-HW-7493 
"AMP PEAK 12(XP22.33) WILD-TYPE"   "AMP PEAK 12(XP22.33) MUTATED" 
                    TCGA-HW-7495                     TCGA-IK-7675 
"AMP PEAK 12(XP22.33) WILD-TYPE" "AMP PEAK 12(XP22.33) WILD-TYPE" 
                    TCGA-IK-8125 
"AMP PEAK 12(XP22.33) WILD-TYPE" 
                    TCGA-CS-4938                     TCGA-CS-4941 
"AMP PEAK 12(XP22.33) WILD-TYPE" "AMP PEAK 12(XP22.33) WILD-TYPE" 
                    TCGA-CS-4942                     TCGA-CS-4943 
"AMP PEAK 12(XP22.33) WILD-TYPE" "AMP PEAK 12(XP22.33) WILD-TYPE" 
                    TCGA-CS-4944                     TCGA-CS-5390 
"AMP PEAK 12(XP22.33) WILD-TYPE" "AMP PEAK 12(XP22.33) WILD-TYPE" 
                    TCGA-CS-5393                     TCGA-CS-5394 
"AMP PEAK 12(XP22.33) WILD-TYPE" "AMP PEAK 12(XP22.33) WILD-TYPE" 
                    TCGA-CS-5395                     TCGA-CS-5396 
"AMP PEAK 12(XP22.33) WILD-TYPE" "AMP PEAK 12(XP22.33) WILD-TYPE" 
                    TCGA-CS-5397                     TCGA-CS-6186 
"AMP PEAK 12(XP22.33) WILD-TYPE" "AMP PEAK 12(XP22.33) WILD-TYPE" 
                    TCGA-CS-6188                     TCGA-CS-6290 
"AMP PEAK 12(XP22.33) WILD-TYPE" "AMP PEAK 12(XP22.33) WILD-TYPE" 
                    TCGA-CS-6665                     TCGA-CS-6666 
  "AMP PEAK 12(XP22.33) MUTATED" "AMP PEAK 12(XP22.33) WILD-TYPE" 
                    TCGA-CS-6667                     TCGA-CS-6668 
  "AMP PEAK 12(XP22.33) MUTATED" "AMP PEAK 12(XP22.33) WILD-TYPE" 
                    TCGA-CS-6669                     TCGA-CS-6670 
"AMP PEAK 12(XP22.33) WILD-TYPE" "AMP PEAK 12(XP22.33) WILD-TYPE" 
                    TCGA-DB-5270                     TCGA-DB-5273 
"AMP PEAK 12(XP22.33) WILD-TYPE" "AMP PEAK 12(XP22.33) WILD-TYPE" 
                    TCGA-DB-5274                     TCGA-DB-5275 
"AMP PEAK 12(XP22.33) WILD-TYPE" "AMP PEAK 12(XP22.33) WILD-TYPE" 
                    TCGA-DB-5276                     TCGA-DB-5277 
"AMP PEAK 12(XP22.33) WILD-TYPE"   "AMP PEAK 12(XP22.33) MUTATED" 
                    TCGA-DB-5278                     TCGA-DB-5279 
"AMP PEAK 12(XP22.33) WILD-TYPE" "AMP PEAK 12(XP22.33) WILD-TYPE" 
                    TCGA-DB-5280                     TCGA-DB-5281 
"AMP PEAK 12(XP22.33) WILD-TYPE" "AMP PEAK 12(XP22.33) WILD-TYPE" 
                    TCGA-DH-5140                     TCGA-DH-5141 
"AMP PEAK 12(XP22.33) WILD-TYPE" "AMP PEAK 12(XP22.33) WILD-TYPE" 
                    TCGA-DH-5142                     TCGA-DH-5143 
"AMP PEAK 12(XP22.33) WILD-TYPE" "AMP PEAK 12(XP22.33) WILD-TYPE" 
                    TCGA-DH-5144                     TCGA-DU-5847 
"AMP PEAK 12(XP22.33) WILD-TYPE" "AMP PEAK 12(XP22.33) WILD-TYPE" 
                    TCGA-DU-5849                     TCGA-DU-5851 
"AMP PEAK 12(XP22.33) WILD-TYPE" "AMP PEAK 12(XP22.33) WILD-TYPE" 
                    TCGA-DU-5852                     TCGA-DU-5853 
"AMP PEAK 12(XP22.33) WILD-TYPE" "AMP PEAK 12(XP22.33) WILD-TYPE" 
                    TCGA-DU-5854                     TCGA-DU-5855 
"AMP PEAK 12(XP22.33) WILD-TYPE" "AMP PEAK 12(XP22.33) WILD-TYPE" 
                    TCGA-DU-5870                     TCGA-DU-5871 
"AMP PEAK 12(XP22.33) WILD-TYPE" "AMP PEAK 12(XP22.33) WILD-TYPE" 
                    TCGA-DU-5872                     TCGA-DU-5874 
"AMP PEAK 12(XP22.33) WILD-TYPE" "AMP PEAK 12(XP22.33) WILD-TYPE" 
                    TCGA-DU-6392                     TCGA-DU-6393 
"AMP PEAK 12(XP22.33) WILD-TYPE" "AMP PEAK 12(XP22.33) WILD-TYPE" 
                    TCGA-DU-6394                     TCGA-DU-6395 
"AMP PEAK 12(XP22.33) WILD-TYPE" "AMP PEAK 12(XP22.33) WILD-TYPE" 
                    TCGA-DU-6396                     TCGA-DU-6397 
"AMP PEAK 12(XP22.33) WILD-TYPE" "AMP PEAK 12(XP22.33) WILD-TYPE" 
                    TCGA-DU-6399                     TCGA-DU-6400 
"AMP PEAK 12(XP22.33) WILD-TYPE" "AMP PEAK 12(XP22.33) WILD-TYPE" 
                    TCGA-DU-6401                     TCGA-DU-6402 
"AMP PEAK 12(XP22.33) WILD-TYPE" "AMP PEAK 12(XP22.33) WILD-TYPE" 
                    TCGA-DU-6403                     TCGA-DU-6404 
"AMP PEAK 12(XP22.33) WILD-TYPE"   "AMP PEAK 12(XP22.33) MUTATED" 
                    TCGA-DU-6405                     TCGA-DU-6406 
"AMP PEAK 12(XP22.33) WILD-TYPE" "AMP PEAK 12(XP22.33) WILD-TYPE" 
                    TCGA-DU-6407                     TCGA-DU-6408 
"AMP PEAK 12(XP22.33) WILD-TYPE" "AMP PEAK 12(XP22.33) WILD-TYPE" 
                    TCGA-DU-6410                     TCGA-DU-6542 
"AMP PEAK 12(XP22.33) WILD-TYPE" "AMP PEAK 12(XP22.33) WILD-TYPE" 
                    TCGA-DU-7006                     TCGA-DU-7007 
"AMP PEAK 12(XP22.33) WILD-TYPE" "AMP PEAK 12(XP22.33) WILD-TYPE" 
                    TCGA-DU-7008                     TCGA-DU-7009 
"AMP PEAK 12(XP22.33) WILD-TYPE" "AMP PEAK 12(XP22.33) WILD-TYPE" 
                    TCGA-DU-7010                     TCGA-DU-7011 
  "AMP PEAK 12(XP22.33) MUTATED" "AMP PEAK 12(XP22.33) WILD-TYPE" 
                    TCGA-DU-7012                     TCGA-DU-7013 
"AMP PEAK 12(XP22.33) WILD-TYPE"   "AMP PEAK 12(XP22.33) MUTATED" 
                    TCGA-DU-7014                     TCGA-DU-7015 
"AMP PEAK 12(XP22.33) WILD-TYPE" "AMP PEAK 12(XP22.33) WILD-TYPE" 
                    TCGA-DU-7018                     TCGA-DU-7019 
"AMP PEAK 12(XP22.33) WILD-TYPE" "AMP PEAK 12(XP22.33) WILD-TYPE" 
                    TCGA-DU-7290                     TCGA-DU-7292 
"AMP PEAK 12(XP22.33) WILD-TYPE" "AMP PEAK 12(XP22.33) WILD-TYPE" 
                    TCGA-DU-7294                     TCGA-DU-7298 
"AMP PEAK 12(XP22.33) WILD-TYPE" "AMP PEAK 12(XP22.33) WILD-TYPE" 
                    TCGA-DU-7299                     TCGA-DU-7300 
  "AMP PEAK 12(XP22.33) MUTATED" "AMP PEAK 12(XP22.33) WILD-TYPE" 
                    TCGA-DU-7301                     TCGA-DU-7302 
"AMP PEAK 12(XP22.33) WILD-TYPE" "AMP PEAK 12(XP22.33) WILD-TYPE" 
                    TCGA-DU-7304                     TCGA-DU-7306 
  "AMP PEAK 12(XP22.33) MUTATED" "AMP PEAK 12(XP22.33) WILD-TYPE" 
                    TCGA-DU-7309                     TCGA-E1-5302 
"AMP PEAK 12(XP22.33) WILD-TYPE"   "AMP PEAK 12(XP22.33) MUTATED" 
                    TCGA-E1-5303                     TCGA-E1-5304 
"AMP PEAK 12(XP22.33) WILD-TYPE" "AMP PEAK 12(XP22.33) WILD-TYPE" 
                    TCGA-E1-5305                     TCGA-E1-5307 
"AMP PEAK 12(XP22.33) WILD-TYPE" "AMP PEAK 12(XP22.33) WILD-TYPE" 
                    TCGA-E1-5311                     TCGA-E1-5318 
"AMP PEAK 12(XP22.33) WILD-TYPE" "AMP PEAK 12(XP22.33) WILD-TYPE" 
                    TCGA-E1-5319                     TCGA-E1-5322 
"AMP PEAK 12(XP22.33) WILD-TYPE" "AMP PEAK 12(XP22.33) WILD-TYPE" 
                    TCGA-EZ-7264                     TCGA-FG-5962 
"AMP PEAK 12(XP22.33) WILD-TYPE" "AMP PEAK 12(XP22.33) WILD-TYPE" 
                    TCGA-FG-5963                     TCGA-FG-5964 
"AMP PEAK 12(XP22.33) WILD-TYPE" "AMP PEAK 12(XP22.33) WILD-TYPE" 
                    TCGA-FG-5965                     TCGA-FG-6688 
"AMP PEAK 12(XP22.33) WILD-TYPE" "AMP PEAK 12(XP22.33) WILD-TYPE" 
                    TCGA-FG-6689                     TCGA-FG-6690 
"AMP PEAK 12(XP22.33) WILD-TYPE" "AMP PEAK 12(XP22.33) WILD-TYPE" 
                    TCGA-FG-6691                     TCGA-FG-6692 
"AMP PEAK 12(XP22.33) WILD-TYPE" "AMP PEAK 12(XP22.33) WILD-TYPE" 
                    TCGA-FG-7634                     TCGA-FG-7636 
"AMP PEAK 12(XP22.33) WILD-TYPE" "AMP PEAK 12(XP22.33) WILD-TYPE" 
                    TCGA-FG-7638                     TCGA-FG-7643 
"AMP PEAK 12(XP22.33) WILD-TYPE" "AMP PEAK 12(XP22.33) WILD-TYPE" 
                    TCGA-FN-7833                     TCGA-HT-7467 
"AMP PEAK 12(XP22.33) WILD-TYPE" "AMP PEAK 12(XP22.33) WILD-TYPE" 
                    TCGA-HT-7468                     TCGA-HT-7470 
"AMP PEAK 12(XP22.33) WILD-TYPE" "AMP PEAK 12(XP22.33) WILD-TYPE" 
                    TCGA-HT-7472                     TCGA-HT-7473 
"AMP PEAK 12(XP22.33) WILD-TYPE"   "AMP PEAK 12(XP22.33) MUTATED" 
                    TCGA-HT-7474                     TCGA-HT-7475 
"AMP PEAK 12(XP22.33) WILD-TYPE" "AMP PEAK 12(XP22.33) WILD-TYPE" 
                    TCGA-HT-7476                     TCGA-HT-7478 
"AMP PEAK 12(XP22.33) WILD-TYPE" "AMP PEAK 12(XP22.33) WILD-TYPE" 
                    TCGA-HT-7479                     TCGA-HT-7480 
"AMP PEAK 12(XP22.33) WILD-TYPE" "AMP PEAK 12(XP22.33) WILD-TYPE" 
                    TCGA-HT-7481                     TCGA-HT-7482 
"AMP PEAK 12(XP22.33) WILD-TYPE" "AMP PEAK 12(XP22.33) WILD-TYPE" 
                    TCGA-HT-7483                     TCGA-HT-7485 
"AMP PEAK 12(XP22.33) WILD-TYPE" "AMP PEAK 12(XP22.33) WILD-TYPE" 
                    TCGA-HT-7601                     TCGA-HT-7602 
"AMP PEAK 12(XP22.33) WILD-TYPE" "AMP PEAK 12(XP22.33) WILD-TYPE" 
                    TCGA-HT-7603                     TCGA-HT-7604 
"AMP PEAK 12(XP22.33) WILD-TYPE"   "AMP PEAK 12(XP22.33) MUTATED" 
                    TCGA-HT-7605                     TCGA-HT-7606 
"AMP PEAK 12(XP22.33) WILD-TYPE" "AMP PEAK 12(XP22.33) WILD-TYPE" 
                    TCGA-HT-7607                     TCGA-HT-7608 
"AMP PEAK 12(XP22.33) WILD-TYPE" "AMP PEAK 12(XP22.33) WILD-TYPE" 
                    TCGA-HT-7609                     TCGA-HT-7610 
"AMP PEAK 12(XP22.33) WILD-TYPE" "AMP PEAK 12(XP22.33) WILD-TYPE" 
                    TCGA-HW-7486                     TCGA-HW-7487 
"AMP PEAK 12(XP22.33) WILD-TYPE" "AMP PEAK 12(XP22.33) WILD-TYPE" 
                    TCGA-HW-7489                     TCGA-HW-7490 
"AMP PEAK 12(XP22.33) WILD-TYPE" "AMP PEAK 12(XP22.33) WILD-TYPE" 
                    TCGA-HW-7491                     TCGA-HW-7493 
"AMP PEAK 12(XP22.33) WILD-TYPE"   "AMP PEAK 12(XP22.33) MUTATED" 
                    TCGA-HW-7495                     TCGA-IK-7675 
"AMP PEAK 12(XP22.33) WILD-TYPE" "AMP PEAK 12(XP22.33) WILD-TYPE" 
                    TCGA-IK-8125 
"AMP PEAK 12(XP22.33) WILD-TYPE" 
[1] "hr=" "1.3"
D12V2, continuous
D12V3, binary
[1] "tbl2"
                                cls
clus                             [,1] [,2]
  AMP PEAK 12(XP22.33) MUTATED      5    7
  AMP PEAK 12(XP22.33) WILD-TYPE   57   76
        clus
vv       AMP PEAK 12(XP22.33) MUTATED AMP PEAK 12(XP22.33) WILD-TYPE
  FEMALE                            5                             57
  MALE                              7                             76
D12V4, continuous
D12V5, multiclass
                   clus
vv                  AMP PEAK 12(XP22.33) MUTATED AMP PEAK 12(XP22.33) WILD-TYPE
  ASTROCYTOMA                                  9                             41
  OLIGOASTROCYTOMA                             1                             35
  OLIGODENDROGLIOMA                            2                             56
D12V6, binary
[1] "tbl2"
                                cls
clus                             [,1] [,2]
  AMP PEAK 12(XP22.33) MUTATED      4    8
  AMP PEAK 12(XP22.33) WILD-TYPE   55   78
     clus
vv    AMP PEAK 12(XP22.33) MUTATED AMP PEAK 12(XP22.33) WILD-TYPE
  NO                             8                             78
  YES                            4                             55
D12V7, binary
[1] "tbl2"
                                cls
clus                             [,1] [,2]
  AMP PEAK 12(XP22.33) MUTATED      6    6
  AMP PEAK 12(XP22.33) WILD-TYPE   68   65
     clus
vv    AMP PEAK 12(XP22.33) MUTATED AMP PEAK 12(XP22.33) WILD-TYPE
  NO                             6                             65
  YES                            6                             68

Clustering(13) Variable = Amp Peak 13(Xp11.22) mutation analysis
D13V1, survival
                    TCGA-CS-4938                     TCGA-CS-4941 
"AMP PEAK 13(XP11.22) WILD-TYPE" "AMP PEAK 13(XP11.22) WILD-TYPE" 
                    TCGA-CS-4942                     TCGA-CS-4943 
"AMP PEAK 13(XP11.22) WILD-TYPE" "AMP PEAK 13(XP11.22) WILD-TYPE" 
                    TCGA-CS-4944                     TCGA-CS-5390 
"AMP PEAK 13(XP11.22) WILD-TYPE" "AMP PEAK 13(XP11.22) WILD-TYPE" 
                    TCGA-CS-5393                     TCGA-CS-5394 
"AMP PEAK 13(XP11.22) WILD-TYPE" "AMP PEAK 13(XP11.22) WILD-TYPE" 
                    TCGA-CS-5395                     TCGA-CS-5396 
"AMP PEAK 13(XP11.22) WILD-TYPE" "AMP PEAK 13(XP11.22) WILD-TYPE" 
                    TCGA-CS-5397                     TCGA-CS-6186 
"AMP PEAK 13(XP11.22) WILD-TYPE" "AMP PEAK 13(XP11.22) WILD-TYPE" 
                    TCGA-CS-6188                     TCGA-CS-6290 
"AMP PEAK 13(XP11.22) WILD-TYPE" "AMP PEAK 13(XP11.22) WILD-TYPE" 
                    TCGA-CS-6665                     TCGA-CS-6666 
  "AMP PEAK 13(XP11.22) MUTATED" "AMP PEAK 13(XP11.22) WILD-TYPE" 
                    TCGA-CS-6667                     TCGA-CS-6668 
  "AMP PEAK 13(XP11.22) MUTATED" "AMP PEAK 13(XP11.22) WILD-TYPE" 
                    TCGA-CS-6669                     TCGA-CS-6670 
"AMP PEAK 13(XP11.22) WILD-TYPE" "AMP PEAK 13(XP11.22) WILD-TYPE" 
                    TCGA-DB-5270                     TCGA-DB-5273 
"AMP PEAK 13(XP11.22) WILD-TYPE" "AMP PEAK 13(XP11.22) WILD-TYPE" 
                    TCGA-DB-5274                     TCGA-DB-5275 
"AMP PEAK 13(XP11.22) WILD-TYPE" "AMP PEAK 13(XP11.22) WILD-TYPE" 
                    TCGA-DB-5276                     TCGA-DB-5277 
"AMP PEAK 13(XP11.22) WILD-TYPE"   "AMP PEAK 13(XP11.22) MUTATED" 
                    TCGA-DB-5278                     TCGA-DB-5279 
"AMP PEAK 13(XP11.22) WILD-TYPE" "AMP PEAK 13(XP11.22) WILD-TYPE" 
                    TCGA-DB-5280                     TCGA-DB-5281 
"AMP PEAK 13(XP11.22) WILD-TYPE"   "AMP PEAK 13(XP11.22) MUTATED" 
                    TCGA-DH-5140                     TCGA-DH-5141 
"AMP PEAK 13(XP11.22) WILD-TYPE" "AMP PEAK 13(XP11.22) WILD-TYPE" 
                    TCGA-DH-5142                     TCGA-DH-5143 
"AMP PEAK 13(XP11.22) WILD-TYPE" "AMP PEAK 13(XP11.22) WILD-TYPE" 
                    TCGA-DH-5144                     TCGA-DU-5847 
"AMP PEAK 13(XP11.22) WILD-TYPE" "AMP PEAK 13(XP11.22) WILD-TYPE" 
                    TCGA-DU-5849                     TCGA-DU-5851 
"AMP PEAK 13(XP11.22) WILD-TYPE" "AMP PEAK 13(XP11.22) WILD-TYPE" 
                    TCGA-DU-5852                     TCGA-DU-5853 
"AMP PEAK 13(XP11.22) WILD-TYPE" "AMP PEAK 13(XP11.22) WILD-TYPE" 
                    TCGA-DU-5854                     TCGA-DU-5855 
"AMP PEAK 13(XP11.22) WILD-TYPE" "AMP PEAK 13(XP11.22) WILD-TYPE" 
                    TCGA-DU-5870                     TCGA-DU-5871 
"AMP PEAK 13(XP11.22) WILD-TYPE"   "AMP PEAK 13(XP11.22) MUTATED" 
                    TCGA-DU-5872                     TCGA-DU-5874 
"AMP PEAK 13(XP11.22) WILD-TYPE" "AMP PEAK 13(XP11.22) WILD-TYPE" 
                    TCGA-DU-6392                     TCGA-DU-6393 
"AMP PEAK 13(XP11.22) WILD-TYPE" "AMP PEAK 13(XP11.22) WILD-TYPE" 
                    TCGA-DU-6394                     TCGA-DU-6395 
"AMP PEAK 13(XP11.22) WILD-TYPE" "AMP PEAK 13(XP11.22) WILD-TYPE" 
                    TCGA-DU-6396                     TCGA-DU-6397 
"AMP PEAK 13(XP11.22) WILD-TYPE" "AMP PEAK 13(XP11.22) WILD-TYPE" 
                    TCGA-DU-6399                     TCGA-DU-6400 
"AMP PEAK 13(XP11.22) WILD-TYPE" "AMP PEAK 13(XP11.22) WILD-TYPE" 
                    TCGA-DU-6401                     TCGA-DU-6402 
"AMP PEAK 13(XP11.22) WILD-TYPE" "AMP PEAK 13(XP11.22) WILD-TYPE" 
                    TCGA-DU-6403                     TCGA-DU-6404 
"AMP PEAK 13(XP11.22) WILD-TYPE" "AMP PEAK 13(XP11.22) WILD-TYPE" 
                    TCGA-DU-6405                     TCGA-DU-6406 
"AMP PEAK 13(XP11.22) WILD-TYPE" "AMP PEAK 13(XP11.22) WILD-TYPE" 
                    TCGA-DU-6407                     TCGA-DU-6408 
  "AMP PEAK 13(XP11.22) MUTATED" "AMP PEAK 13(XP11.22) WILD-TYPE" 
                    TCGA-DU-6410                     TCGA-DU-6542 
"AMP PEAK 13(XP11.22) WILD-TYPE" "AMP PEAK 13(XP11.22) WILD-TYPE" 
                    TCGA-DU-7006                     TCGA-DU-7007 
"AMP PEAK 13(XP11.22) WILD-TYPE" "AMP PEAK 13(XP11.22) WILD-TYPE" 
                    TCGA-DU-7008                     TCGA-DU-7009 
"AMP PEAK 13(XP11.22) WILD-TYPE" "AMP PEAK 13(XP11.22) WILD-TYPE" 
                    TCGA-DU-7010                     TCGA-DU-7011 
"AMP PEAK 13(XP11.22) WILD-TYPE" "AMP PEAK 13(XP11.22) WILD-TYPE" 
                    TCGA-DU-7012                     TCGA-DU-7013 
"AMP PEAK 13(XP11.22) WILD-TYPE" "AMP PEAK 13(XP11.22) WILD-TYPE" 
                    TCGA-DU-7014                     TCGA-DU-7015 
  "AMP PEAK 13(XP11.22) MUTATED" "AMP PEAK 13(XP11.22) WILD-TYPE" 
                    TCGA-DU-7018                     TCGA-DU-7019 
"AMP PEAK 13(XP11.22) WILD-TYPE" "AMP PEAK 13(XP11.22) WILD-TYPE" 
                    TCGA-DU-7290                     TCGA-DU-7292 
"AMP PEAK 13(XP11.22) WILD-TYPE" "AMP PEAK 13(XP11.22) WILD-TYPE" 
                    TCGA-DU-7294                     TCGA-DU-7298 
"AMP PEAK 13(XP11.22) WILD-TYPE" "AMP PEAK 13(XP11.22) WILD-TYPE" 
                    TCGA-DU-7299                     TCGA-DU-7300 
"AMP PEAK 13(XP11.22) WILD-TYPE" "AMP PEAK 13(XP11.22) WILD-TYPE" 
                    TCGA-DU-7301                     TCGA-DU-7302 
"AMP PEAK 13(XP11.22) WILD-TYPE" "AMP PEAK 13(XP11.22) WILD-TYPE" 
                    TCGA-DU-7304                     TCGA-DU-7306 
"AMP PEAK 13(XP11.22) WILD-TYPE" "AMP PEAK 13(XP11.22) WILD-TYPE" 
                    TCGA-DU-7309                     TCGA-E1-5302 
"AMP PEAK 13(XP11.22) WILD-TYPE"   "AMP PEAK 13(XP11.22) MUTATED" 
                    TCGA-E1-5303                     TCGA-E1-5304 
"AMP PEAK 13(XP11.22) WILD-TYPE" "AMP PEAK 13(XP11.22) WILD-TYPE" 
                    TCGA-E1-5305                     TCGA-E1-5307 
"AMP PEAK 13(XP11.22) WILD-TYPE" "AMP PEAK 13(XP11.22) WILD-TYPE" 
                    TCGA-E1-5311                     TCGA-E1-5318 
"AMP PEAK 13(XP11.22) WILD-TYPE"   "AMP PEAK 13(XP11.22) MUTATED" 
                    TCGA-E1-5319                     TCGA-E1-5322 
"AMP PEAK 13(XP11.22) WILD-TYPE" "AMP PEAK 13(XP11.22) WILD-TYPE" 
                    TCGA-EZ-7264                     TCGA-FG-5962 
"AMP PEAK 13(XP11.22) WILD-TYPE" "AMP PEAK 13(XP11.22) WILD-TYPE" 
                    TCGA-FG-5963                     TCGA-FG-5964 
"AMP PEAK 13(XP11.22) WILD-TYPE" "AMP PEAK 13(XP11.22) WILD-TYPE" 
                    TCGA-FG-5965                     TCGA-FG-6688 
"AMP PEAK 13(XP11.22) WILD-TYPE" "AMP PEAK 13(XP11.22) WILD-TYPE" 
                    TCGA-FG-6689                     TCGA-FG-6690 
"AMP PEAK 13(XP11.22) WILD-TYPE" "AMP PEAK 13(XP11.22) WILD-TYPE" 
                    TCGA-FG-6691                     TCGA-FG-6692 
"AMP PEAK 13(XP11.22) WILD-TYPE" "AMP PEAK 13(XP11.22) WILD-TYPE" 
                    TCGA-FG-7634                     TCGA-FG-7636 
"AMP PEAK 13(XP11.22) WILD-TYPE"   "AMP PEAK 13(XP11.22) MUTATED" 
                    TCGA-FG-7638                     TCGA-FG-7643 
"AMP PEAK 13(XP11.22) WILD-TYPE" "AMP PEAK 13(XP11.22) WILD-TYPE" 
                    TCGA-FN-7833                     TCGA-HT-7467 
"AMP PEAK 13(XP11.22) WILD-TYPE" "AMP PEAK 13(XP11.22) WILD-TYPE" 
                    TCGA-HT-7468                     TCGA-HT-7470 
"AMP PEAK 13(XP11.22) WILD-TYPE" "AMP PEAK 13(XP11.22) WILD-TYPE" 
                    TCGA-HT-7472                     TCGA-HT-7473 
"AMP PEAK 13(XP11.22) WILD-TYPE" "AMP PEAK 13(XP11.22) WILD-TYPE" 
                    TCGA-HT-7474                     TCGA-HT-7475 
"AMP PEAK 13(XP11.22) WILD-TYPE"   "AMP PEAK 13(XP11.22) MUTATED" 
                    TCGA-HT-7476                     TCGA-HT-7478 
  "AMP PEAK 13(XP11.22) MUTATED" "AMP PEAK 13(XP11.22) WILD-TYPE" 
                    TCGA-HT-7479                     TCGA-HT-7480 
"AMP PEAK 13(XP11.22) WILD-TYPE" "AMP PEAK 13(XP11.22) WILD-TYPE" 
                    TCGA-HT-7481                     TCGA-HT-7482 
"AMP PEAK 13(XP11.22) WILD-TYPE" "AMP PEAK 13(XP11.22) WILD-TYPE" 
                    TCGA-HT-7483                     TCGA-HT-7485 
"AMP PEAK 13(XP11.22) WILD-TYPE" "AMP PEAK 13(XP11.22) WILD-TYPE" 
                    TCGA-HT-7601                     TCGA-HT-7602 
"AMP PEAK 13(XP11.22) WILD-TYPE" "AMP PEAK 13(XP11.22) WILD-TYPE" 
                    TCGA-HT-7603                     TCGA-HT-7604 
"AMP PEAK 13(XP11.22) WILD-TYPE" "AMP PEAK 13(XP11.22) WILD-TYPE" 
                    TCGA-HT-7605                     TCGA-HT-7606 
"AMP PEAK 13(XP11.22) WILD-TYPE" "AMP PEAK 13(XP11.22) WILD-TYPE" 
                    TCGA-HT-7607                     TCGA-HT-7608 
"AMP PEAK 13(XP11.22) WILD-TYPE" "AMP PEAK 13(XP11.22) WILD-TYPE" 
                    TCGA-HT-7609                     TCGA-HT-7610 
  "AMP PEAK 13(XP11.22) MUTATED" "AMP PEAK 13(XP11.22) WILD-TYPE" 
                    TCGA-HW-7486                     TCGA-HW-7487 
"AMP PEAK 13(XP11.22) WILD-TYPE" "AMP PEAK 13(XP11.22) WILD-TYPE" 
                    TCGA-HW-7489                     TCGA-HW-7490 
"AMP PEAK 13(XP11.22) WILD-TYPE" "AMP PEAK 13(XP11.22) WILD-TYPE" 
                    TCGA-HW-7491                     TCGA-HW-7493 
"AMP PEAK 13(XP11.22) WILD-TYPE"   "AMP PEAK 13(XP11.22) MUTATED" 
                    TCGA-HW-7495                     TCGA-IK-7675 
"AMP PEAK 13(XP11.22) WILD-TYPE" "AMP PEAK 13(XP11.22) WILD-TYPE" 
                    TCGA-IK-8125 
"AMP PEAK 13(XP11.22) WILD-TYPE" 
                    TCGA-CS-4938                     TCGA-CS-4941 
"AMP PEAK 13(XP11.22) WILD-TYPE" "AMP PEAK 13(XP11.22) WILD-TYPE" 
                    TCGA-CS-4942                     TCGA-CS-4943 
"AMP PEAK 13(XP11.22) WILD-TYPE" "AMP PEAK 13(XP11.22) WILD-TYPE" 
                    TCGA-CS-4944                     TCGA-CS-5390 
"AMP PEAK 13(XP11.22) WILD-TYPE" "AMP PEAK 13(XP11.22) WILD-TYPE" 
                    TCGA-CS-5393                     TCGA-CS-5394 
"AMP PEAK 13(XP11.22) WILD-TYPE" "AMP PEAK 13(XP11.22) WILD-TYPE" 
                    TCGA-CS-5395                     TCGA-CS-5396 
"AMP PEAK 13(XP11.22) WILD-TYPE" "AMP PEAK 13(XP11.22) WILD-TYPE" 
                    TCGA-CS-5397                     TCGA-CS-6186 
"AMP PEAK 13(XP11.22) WILD-TYPE" "AMP PEAK 13(XP11.22) WILD-TYPE" 
                    TCGA-CS-6188                     TCGA-CS-6290 
"AMP PEAK 13(XP11.22) WILD-TYPE" "AMP PEAK 13(XP11.22) WILD-TYPE" 
                    TCGA-CS-6665                     TCGA-CS-6666 
  "AMP PEAK 13(XP11.22) MUTATED" "AMP PEAK 13(XP11.22) WILD-TYPE" 
                    TCGA-CS-6667                     TCGA-CS-6668 
  "AMP PEAK 13(XP11.22) MUTATED" "AMP PEAK 13(XP11.22) WILD-TYPE" 
                    TCGA-CS-6669                     TCGA-CS-6670 
"AMP PEAK 13(XP11.22) WILD-TYPE" "AMP PEAK 13(XP11.22) WILD-TYPE" 
                    TCGA-DB-5270                     TCGA-DB-5273 
"AMP PEAK 13(XP11.22) WILD-TYPE" "AMP PEAK 13(XP11.22) WILD-TYPE" 
                    TCGA-DB-5274                     TCGA-DB-5275 
"AMP PEAK 13(XP11.22) WILD-TYPE" "AMP PEAK 13(XP11.22) WILD-TYPE" 
                    TCGA-DB-5276                     TCGA-DB-5277 
"AMP PEAK 13(XP11.22) WILD-TYPE"   "AMP PEAK 13(XP11.22) MUTATED" 
                    TCGA-DB-5278                     TCGA-DB-5279 
"AMP PEAK 13(XP11.22) WILD-TYPE" "AMP PEAK 13(XP11.22) WILD-TYPE" 
                    TCGA-DB-5280                     TCGA-DB-5281 
"AMP PEAK 13(XP11.22) WILD-TYPE"   "AMP PEAK 13(XP11.22) MUTATED" 
                    TCGA-DH-5140                     TCGA-DH-5141 
"AMP PEAK 13(XP11.22) WILD-TYPE" "AMP PEAK 13(XP11.22) WILD-TYPE" 
                    TCGA-DH-5142                     TCGA-DH-5143 
"AMP PEAK 13(XP11.22) WILD-TYPE" "AMP PEAK 13(XP11.22) WILD-TYPE" 
                    TCGA-DH-5144                     TCGA-DU-5847 
"AMP PEAK 13(XP11.22) WILD-TYPE" "AMP PEAK 13(XP11.22) WILD-TYPE" 
                    TCGA-DU-5849                     TCGA-DU-5851 
"AMP PEAK 13(XP11.22) WILD-TYPE" "AMP PEAK 13(XP11.22) WILD-TYPE" 
                    TCGA-DU-5852                     TCGA-DU-5853 
"AMP PEAK 13(XP11.22) WILD-TYPE" "AMP PEAK 13(XP11.22) WILD-TYPE" 
                    TCGA-DU-5854                     TCGA-DU-5855 
"AMP PEAK 13(XP11.22) WILD-TYPE" "AMP PEAK 13(XP11.22) WILD-TYPE" 
                    TCGA-DU-5870                     TCGA-DU-5871 
"AMP PEAK 13(XP11.22) WILD-TYPE"   "AMP PEAK 13(XP11.22) MUTATED" 
                    TCGA-DU-5872                     TCGA-DU-5874 
"AMP PEAK 13(XP11.22) WILD-TYPE" "AMP PEAK 13(XP11.22) WILD-TYPE" 
                    TCGA-DU-6392                     TCGA-DU-6393 
"AMP PEAK 13(XP11.22) WILD-TYPE" "AMP PEAK 13(XP11.22) WILD-TYPE" 
                    TCGA-DU-6394                     TCGA-DU-6395 
"AMP PEAK 13(XP11.22) WILD-TYPE" "AMP PEAK 13(XP11.22) WILD-TYPE" 
                    TCGA-DU-6396                     TCGA-DU-6397 
"AMP PEAK 13(XP11.22) WILD-TYPE" "AMP PEAK 13(XP11.22) WILD-TYPE" 
                    TCGA-DU-6399                     TCGA-DU-6400 
"AMP PEAK 13(XP11.22) WILD-TYPE" "AMP PEAK 13(XP11.22) WILD-TYPE" 
                    TCGA-DU-6401                     TCGA-DU-6402 
"AMP PEAK 13(XP11.22) WILD-TYPE" "AMP PEAK 13(XP11.22) WILD-TYPE" 
                    TCGA-DU-6403                     TCGA-DU-6404 
"AMP PEAK 13(XP11.22) WILD-TYPE" "AMP PEAK 13(XP11.22) WILD-TYPE" 
                    TCGA-DU-6405                     TCGA-DU-6406 
"AMP PEAK 13(XP11.22) WILD-TYPE" "AMP PEAK 13(XP11.22) WILD-TYPE" 
                    TCGA-DU-6407                     TCGA-DU-6408 
  "AMP PEAK 13(XP11.22) MUTATED" "AMP PEAK 13(XP11.22) WILD-TYPE" 
                    TCGA-DU-6410                     TCGA-DU-6542 
"AMP PEAK 13(XP11.22) WILD-TYPE" "AMP PEAK 13(XP11.22) WILD-TYPE" 
                    TCGA-DU-7006                     TCGA-DU-7007 
"AMP PEAK 13(XP11.22) WILD-TYPE" "AMP PEAK 13(XP11.22) WILD-TYPE" 
                    TCGA-DU-7008                     TCGA-DU-7009 
"AMP PEAK 13(XP11.22) WILD-TYPE" "AMP PEAK 13(XP11.22) WILD-TYPE" 
                    TCGA-DU-7010                     TCGA-DU-7011 
"AMP PEAK 13(XP11.22) WILD-TYPE" "AMP PEAK 13(XP11.22) WILD-TYPE" 
                    TCGA-DU-7012                     TCGA-DU-7013 
"AMP PEAK 13(XP11.22) WILD-TYPE" "AMP PEAK 13(XP11.22) WILD-TYPE" 
                    TCGA-DU-7014                     TCGA-DU-7015 
  "AMP PEAK 13(XP11.22) MUTATED" "AMP PEAK 13(XP11.22) WILD-TYPE" 
                    TCGA-DU-7018                     TCGA-DU-7019 
"AMP PEAK 13(XP11.22) WILD-TYPE" "AMP PEAK 13(XP11.22) WILD-TYPE" 
                    TCGA-DU-7290                     TCGA-DU-7292 
"AMP PEAK 13(XP11.22) WILD-TYPE" "AMP PEAK 13(XP11.22) WILD-TYPE" 
                    TCGA-DU-7294                     TCGA-DU-7298 
"AMP PEAK 13(XP11.22) WILD-TYPE" "AMP PEAK 13(XP11.22) WILD-TYPE" 
                    TCGA-DU-7299                     TCGA-DU-7300 
"AMP PEAK 13(XP11.22) WILD-TYPE" "AMP PEAK 13(XP11.22) WILD-TYPE" 
                    TCGA-DU-7301                     TCGA-DU-7302 
"AMP PEAK 13(XP11.22) WILD-TYPE" "AMP PEAK 13(XP11.22) WILD-TYPE" 
                    TCGA-DU-7304                     TCGA-DU-7306 
"AMP PEAK 13(XP11.22) WILD-TYPE" "AMP PEAK 13(XP11.22) WILD-TYPE" 
                    TCGA-DU-7309                     TCGA-E1-5302 
"AMP PEAK 13(XP11.22) WILD-TYPE"   "AMP PEAK 13(XP11.22) MUTATED" 
                    TCGA-E1-5303                     TCGA-E1-5304 
"AMP PEAK 13(XP11.22) WILD-TYPE" "AMP PEAK 13(XP11.22) WILD-TYPE" 
                    TCGA-E1-5305                     TCGA-E1-5307 
"AMP PEAK 13(XP11.22) WILD-TYPE" "AMP PEAK 13(XP11.22) WILD-TYPE" 
                    TCGA-E1-5311                     TCGA-E1-5318 
"AMP PEAK 13(XP11.22) WILD-TYPE"   "AMP PEAK 13(XP11.22) MUTATED" 
                    TCGA-E1-5319                     TCGA-E1-5322 
"AMP PEAK 13(XP11.22) WILD-TYPE" "AMP PEAK 13(XP11.22) WILD-TYPE" 
                    TCGA-EZ-7264                     TCGA-FG-5962 
"AMP PEAK 13(XP11.22) WILD-TYPE" "AMP PEAK 13(XP11.22) WILD-TYPE" 
                    TCGA-FG-5963                     TCGA-FG-5964 
"AMP PEAK 13(XP11.22) WILD-TYPE" "AMP PEAK 13(XP11.22) WILD-TYPE" 
                    TCGA-FG-5965                     TCGA-FG-6688 
"AMP PEAK 13(XP11.22) WILD-TYPE" "AMP PEAK 13(XP11.22) WILD-TYPE" 
                    TCGA-FG-6689                     TCGA-FG-6690 
"AMP PEAK 13(XP11.22) WILD-TYPE" "AMP PEAK 13(XP11.22) WILD-TYPE" 
                    TCGA-FG-6691                     TCGA-FG-6692 
"AMP PEAK 13(XP11.22) WILD-TYPE" "AMP PEAK 13(XP11.22) WILD-TYPE" 
                    TCGA-FG-7634                     TCGA-FG-7636 
"AMP PEAK 13(XP11.22) WILD-TYPE"   "AMP PEAK 13(XP11.22) MUTATED" 
                    TCGA-FG-7638                     TCGA-FG-7643 
"AMP PEAK 13(XP11.22) WILD-TYPE" "AMP PEAK 13(XP11.22) WILD-TYPE" 
                    TCGA-FN-7833                     TCGA-HT-7467 
"AMP PEAK 13(XP11.22) WILD-TYPE" "AMP PEAK 13(XP11.22) WILD-TYPE" 
                    TCGA-HT-7468                     TCGA-HT-7470 
"AMP PEAK 13(XP11.22) WILD-TYPE" "AMP PEAK 13(XP11.22) WILD-TYPE" 
                    TCGA-HT-7472                     TCGA-HT-7473 
"AMP PEAK 13(XP11.22) WILD-TYPE" "AMP PEAK 13(XP11.22) WILD-TYPE" 
                    TCGA-HT-7474                     TCGA-HT-7475 
"AMP PEAK 13(XP11.22) WILD-TYPE"   "AMP PEAK 13(XP11.22) MUTATED" 
                    TCGA-HT-7476                     TCGA-HT-7478 
  "AMP PEAK 13(XP11.22) MUTATED" "AMP PEAK 13(XP11.22) WILD-TYPE" 
                    TCGA-HT-7479                     TCGA-HT-7480 
"AMP PEAK 13(XP11.22) WILD-TYPE" "AMP PEAK 13(XP11.22) WILD-TYPE" 
                    TCGA-HT-7481                     TCGA-HT-7482 
"AMP PEAK 13(XP11.22) WILD-TYPE" "AMP PEAK 13(XP11.22) WILD-TYPE" 
                    TCGA-HT-7483                     TCGA-HT-7485 
"AMP PEAK 13(XP11.22) WILD-TYPE" "AMP PEAK 13(XP11.22) WILD-TYPE" 
                    TCGA-HT-7601                     TCGA-HT-7602 
"AMP PEAK 13(XP11.22) WILD-TYPE" "AMP PEAK 13(XP11.22) WILD-TYPE" 
                    TCGA-HT-7603                     TCGA-HT-7604 
"AMP PEAK 13(XP11.22) WILD-TYPE" "AMP PEAK 13(XP11.22) WILD-TYPE" 
                    TCGA-HT-7605                     TCGA-HT-7606 
"AMP PEAK 13(XP11.22) WILD-TYPE" "AMP PEAK 13(XP11.22) WILD-TYPE" 
                    TCGA-HT-7607                     TCGA-HT-7608 
"AMP PEAK 13(XP11.22) WILD-TYPE" "AMP PEAK 13(XP11.22) WILD-TYPE" 
                    TCGA-HT-7609                     TCGA-HT-7610 
  "AMP PEAK 13(XP11.22) MUTATED" "AMP PEAK 13(XP11.22) WILD-TYPE" 
                    TCGA-HW-7486                     TCGA-HW-7487 
"AMP PEAK 13(XP11.22) WILD-TYPE" "AMP PEAK 13(XP11.22) WILD-TYPE" 
                    TCGA-HW-7489                     TCGA-HW-7490 
"AMP PEAK 13(XP11.22) WILD-TYPE" "AMP PEAK 13(XP11.22) WILD-TYPE" 
                    TCGA-HW-7491                     TCGA-HW-7493 
"AMP PEAK 13(XP11.22) WILD-TYPE"   "AMP PEAK 13(XP11.22) MUTATED" 
                    TCGA-HW-7495                     TCGA-IK-7675 
"AMP PEAK 13(XP11.22) WILD-TYPE" "AMP PEAK 13(XP11.22) WILD-TYPE" 
                    TCGA-IK-8125 
"AMP PEAK 13(XP11.22) WILD-TYPE" 
                    TCGA-CS-4938                     TCGA-CS-4941 
"AMP PEAK 13(XP11.22) WILD-TYPE" "AMP PEAK 13(XP11.22) WILD-TYPE" 
                    TCGA-CS-4942                     TCGA-CS-4943 
"AMP PEAK 13(XP11.22) WILD-TYPE" "AMP PEAK 13(XP11.22) WILD-TYPE" 
                    TCGA-CS-4944                     TCGA-CS-5390 
"AMP PEAK 13(XP11.22) WILD-TYPE" "AMP PEAK 13(XP11.22) WILD-TYPE" 
                    TCGA-CS-5393                     TCGA-CS-5394 
"AMP PEAK 13(XP11.22) WILD-TYPE" "AMP PEAK 13(XP11.22) WILD-TYPE" 
                    TCGA-CS-5395                     TCGA-CS-5396 
"AMP PEAK 13(XP11.22) WILD-TYPE" "AMP PEAK 13(XP11.22) WILD-TYPE" 
                    TCGA-CS-5397                     TCGA-CS-6186 
"AMP PEAK 13(XP11.22) WILD-TYPE" "AMP PEAK 13(XP11.22) WILD-TYPE" 
                    TCGA-CS-6188                     TCGA-CS-6290 
"AMP PEAK 13(XP11.22) WILD-TYPE" "AMP PEAK 13(XP11.22) WILD-TYPE" 
                    TCGA-CS-6665                     TCGA-CS-6666 
  "AMP PEAK 13(XP11.22) MUTATED" "AMP PEAK 13(XP11.22) WILD-TYPE" 
                    TCGA-CS-6667                     TCGA-CS-6668 
  "AMP PEAK 13(XP11.22) MUTATED" "AMP PEAK 13(XP11.22) WILD-TYPE" 
                    TCGA-CS-6669                     TCGA-CS-6670 
"AMP PEAK 13(XP11.22) WILD-TYPE" "AMP PEAK 13(XP11.22) WILD-TYPE" 
                    TCGA-DB-5270                     TCGA-DB-5273 
"AMP PEAK 13(XP11.22) WILD-TYPE" "AMP PEAK 13(XP11.22) WILD-TYPE" 
                    TCGA-DB-5274                     TCGA-DB-5275 
"AMP PEAK 13(XP11.22) WILD-TYPE" "AMP PEAK 13(XP11.22) WILD-TYPE" 
                    TCGA-DB-5276                     TCGA-DB-5277 
"AMP PEAK 13(XP11.22) WILD-TYPE"   "AMP PEAK 13(XP11.22) MUTATED" 
                    TCGA-DB-5278                     TCGA-DB-5279 
"AMP PEAK 13(XP11.22) WILD-TYPE" "AMP PEAK 13(XP11.22) WILD-TYPE" 
                    TCGA-DB-5280                     TCGA-DB-5281 
"AMP PEAK 13(XP11.22) WILD-TYPE"   "AMP PEAK 13(XP11.22) MUTATED" 
                    TCGA-DH-5140                     TCGA-DH-5141 
"AMP PEAK 13(XP11.22) WILD-TYPE" "AMP PEAK 13(XP11.22) WILD-TYPE" 
                    TCGA-DH-5142                     TCGA-DH-5143 
"AMP PEAK 13(XP11.22) WILD-TYPE" "AMP PEAK 13(XP11.22) WILD-TYPE" 
                    TCGA-DH-5144                     TCGA-DU-5847 
"AMP PEAK 13(XP11.22) WILD-TYPE" "AMP PEAK 13(XP11.22) WILD-TYPE" 
                    TCGA-DU-5849                     TCGA-DU-5851 
"AMP PEAK 13(XP11.22) WILD-TYPE" "AMP PEAK 13(XP11.22) WILD-TYPE" 
                    TCGA-DU-5852                     TCGA-DU-5853 
"AMP PEAK 13(XP11.22) WILD-TYPE" "AMP PEAK 13(XP11.22) WILD-TYPE" 
                    TCGA-DU-5854                     TCGA-DU-5855 
"AMP PEAK 13(XP11.22) WILD-TYPE" "AMP PEAK 13(XP11.22) WILD-TYPE" 
                    TCGA-DU-5870                     TCGA-DU-5871 
"AMP PEAK 13(XP11.22) WILD-TYPE"   "AMP PEAK 13(XP11.22) MUTATED" 
                    TCGA-DU-5872                     TCGA-DU-5874 
"AMP PEAK 13(XP11.22) WILD-TYPE" "AMP PEAK 13(XP11.22) WILD-TYPE" 
                    TCGA-DU-6392                     TCGA-DU-6393 
"AMP PEAK 13(XP11.22) WILD-TYPE" "AMP PEAK 13(XP11.22) WILD-TYPE" 
                    TCGA-DU-6394                     TCGA-DU-6395 
"AMP PEAK 13(XP11.22) WILD-TYPE" "AMP PEAK 13(XP11.22) WILD-TYPE" 
                    TCGA-DU-6396                     TCGA-DU-6397 
"AMP PEAK 13(XP11.22) WILD-TYPE" "AMP PEAK 13(XP11.22) WILD-TYPE" 
                    TCGA-DU-6399                     TCGA-DU-6400 
"AMP PEAK 13(XP11.22) WILD-TYPE" "AMP PEAK 13(XP11.22) WILD-TYPE" 
                    TCGA-DU-6401                     TCGA-DU-6402 
"AMP PEAK 13(XP11.22) WILD-TYPE" "AMP PEAK 13(XP11.22) WILD-TYPE" 
                    TCGA-DU-6403                     TCGA-DU-6404 
"AMP PEAK 13(XP11.22) WILD-TYPE" "AMP PEAK 13(XP11.22) WILD-TYPE" 
                    TCGA-DU-6405                     TCGA-DU-6406 
"AMP PEAK 13(XP11.22) WILD-TYPE" "AMP PEAK 13(XP11.22) WILD-TYPE" 
                    TCGA-DU-6407                     TCGA-DU-6408 
  "AMP PEAK 13(XP11.22) MUTATED" "AMP PEAK 13(XP11.22) WILD-TYPE" 
                    TCGA-DU-6410                     TCGA-DU-6542 
"AMP PEAK 13(XP11.22) WILD-TYPE" "AMP PEAK 13(XP11.22) WILD-TYPE" 
                    TCGA-DU-7006                     TCGA-DU-7007 
"AMP PEAK 13(XP11.22) WILD-TYPE" "AMP PEAK 13(XP11.22) WILD-TYPE" 
                    TCGA-DU-7008                     TCGA-DU-7009 
"AMP PEAK 13(XP11.22) WILD-TYPE" "AMP PEAK 13(XP11.22) WILD-TYPE" 
                    TCGA-DU-7010                     TCGA-DU-7011 
"AMP PEAK 13(XP11.22) WILD-TYPE" "AMP PEAK 13(XP11.22) WILD-TYPE" 
                    TCGA-DU-7012                     TCGA-DU-7013 
"AMP PEAK 13(XP11.22) WILD-TYPE" "AMP PEAK 13(XP11.22) WILD-TYPE" 
                    TCGA-DU-7014                     TCGA-DU-7015 
  "AMP PEAK 13(XP11.22) MUTATED" "AMP PEAK 13(XP11.22) WILD-TYPE" 
                    TCGA-DU-7018                     TCGA-DU-7019 
"AMP PEAK 13(XP11.22) WILD-TYPE" "AMP PEAK 13(XP11.22) WILD-TYPE" 
                    TCGA-DU-7290                     TCGA-DU-7292 
"AMP PEAK 13(XP11.22) WILD-TYPE" "AMP PEAK 13(XP11.22) WILD-TYPE" 
                    TCGA-DU-7294                     TCGA-DU-7298 
"AMP PEAK 13(XP11.22) WILD-TYPE" "AMP PEAK 13(XP11.22) WILD-TYPE" 
                    TCGA-DU-7299                     TCGA-DU-7300 
"AMP PEAK 13(XP11.22) WILD-TYPE" "AMP PEAK 13(XP11.22) WILD-TYPE" 
                    TCGA-DU-7301                     TCGA-DU-7302 
"AMP PEAK 13(XP11.22) WILD-TYPE" "AMP PEAK 13(XP11.22) WILD-TYPE" 
                    TCGA-DU-7304                     TCGA-DU-7306 
"AMP PEAK 13(XP11.22) WILD-TYPE" "AMP PEAK 13(XP11.22) WILD-TYPE" 
                    TCGA-DU-7309                     TCGA-E1-5302 
"AMP PEAK 13(XP11.22) WILD-TYPE"   "AMP PEAK 13(XP11.22) MUTATED" 
                    TCGA-E1-5303                     TCGA-E1-5304 
"AMP PEAK 13(XP11.22) WILD-TYPE" "AMP PEAK 13(XP11.22) WILD-TYPE" 
                    TCGA-E1-5305                     TCGA-E1-5307 
"AMP PEAK 13(XP11.22) WILD-TYPE" "AMP PEAK 13(XP11.22) WILD-TYPE" 
                    TCGA-E1-5311                     TCGA-E1-5318 
"AMP PEAK 13(XP11.22) WILD-TYPE"   "AMP PEAK 13(XP11.22) MUTATED" 
                    TCGA-E1-5319                     TCGA-E1-5322 
"AMP PEAK 13(XP11.22) WILD-TYPE" "AMP PEAK 13(XP11.22) WILD-TYPE" 
                    TCGA-EZ-7264                     TCGA-FG-5962 
"AMP PEAK 13(XP11.22) WILD-TYPE" "AMP PEAK 13(XP11.22) WILD-TYPE" 
                    TCGA-FG-5963                     TCGA-FG-5964 
"AMP PEAK 13(XP11.22) WILD-TYPE" "AMP PEAK 13(XP11.22) WILD-TYPE" 
                    TCGA-FG-5965                     TCGA-FG-6688 
"AMP PEAK 13(XP11.22) WILD-TYPE" "AMP PEAK 13(XP11.22) WILD-TYPE" 
                    TCGA-FG-6689                     TCGA-FG-6690 
"AMP PEAK 13(XP11.22) WILD-TYPE" "AMP PEAK 13(XP11.22) WILD-TYPE" 
                    TCGA-FG-6691                     TCGA-FG-6692 
"AMP PEAK 13(XP11.22) WILD-TYPE" "AMP PEAK 13(XP11.22) WILD-TYPE" 
                    TCGA-FG-7634                     TCGA-FG-7636 
"AMP PEAK 13(XP11.22) WILD-TYPE"   "AMP PEAK 13(XP11.22) MUTATED" 
                    TCGA-FG-7638                     TCGA-FG-7643 
"AMP PEAK 13(XP11.22) WILD-TYPE" "AMP PEAK 13(XP11.22) WILD-TYPE" 
                    TCGA-FN-7833                     TCGA-HT-7467 
"AMP PEAK 13(XP11.22) WILD-TYPE" "AMP PEAK 13(XP11.22) WILD-TYPE" 
                    TCGA-HT-7468                     TCGA-HT-7470 
"AMP PEAK 13(XP11.22) WILD-TYPE" "AMP PEAK 13(XP11.22) WILD-TYPE" 
                    TCGA-HT-7472                     TCGA-HT-7473 
"AMP PEAK 13(XP11.22) WILD-TYPE" "AMP PEAK 13(XP11.22) WILD-TYPE" 
                    TCGA-HT-7474                     TCGA-HT-7475 
"AMP PEAK 13(XP11.22) WILD-TYPE"   "AMP PEAK 13(XP11.22) MUTATED" 
                    TCGA-HT-7476                     TCGA-HT-7478 
  "AMP PEAK 13(XP11.22) MUTATED" "AMP PEAK 13(XP11.22) WILD-TYPE" 
                    TCGA-HT-7479                     TCGA-HT-7480 
"AMP PEAK 13(XP11.22) WILD-TYPE" "AMP PEAK 13(XP11.22) WILD-TYPE" 
                    TCGA-HT-7481                     TCGA-HT-7482 
"AMP PEAK 13(XP11.22) WILD-TYPE" "AMP PEAK 13(XP11.22) WILD-TYPE" 
                    TCGA-HT-7483                     TCGA-HT-7485 
"AMP PEAK 13(XP11.22) WILD-TYPE" "AMP PEAK 13(XP11.22) WILD-TYPE" 
                    TCGA-HT-7601                     TCGA-HT-7602 
"AMP PEAK 13(XP11.22) WILD-TYPE" "AMP PEAK 13(XP11.22) WILD-TYPE" 
                    TCGA-HT-7603                     TCGA-HT-7604 
"AMP PEAK 13(XP11.22) WILD-TYPE" "AMP PEAK 13(XP11.22) WILD-TYPE" 
                    TCGA-HT-7605                     TCGA-HT-7606 
"AMP PEAK 13(XP11.22) WILD-TYPE" "AMP PEAK 13(XP11.22) WILD-TYPE" 
                    TCGA-HT-7607                     TCGA-HT-7608 
"AMP PEAK 13(XP11.22) WILD-TYPE" "AMP PEAK 13(XP11.22) WILD-TYPE" 
                    TCGA-HT-7609                     TCGA-HT-7610 
  "AMP PEAK 13(XP11.22) MUTATED" "AMP PEAK 13(XP11.22) WILD-TYPE" 
                    TCGA-HW-7486                     TCGA-HW-7487 
"AMP PEAK 13(XP11.22) WILD-TYPE" "AMP PEAK 13(XP11.22) WILD-TYPE" 
                    TCGA-HW-7489                     TCGA-HW-7490 
"AMP PEAK 13(XP11.22) WILD-TYPE" "AMP PEAK 13(XP11.22) WILD-TYPE" 
                    TCGA-HW-7491                     TCGA-HW-7493 
"AMP PEAK 13(XP11.22) WILD-TYPE"   "AMP PEAK 13(XP11.22) MUTATED" 
                    TCGA-HW-7495                     TCGA-IK-7675 
"AMP PEAK 13(XP11.22) WILD-TYPE" "AMP PEAK 13(XP11.22) WILD-TYPE" 
                    TCGA-IK-8125 
"AMP PEAK 13(XP11.22) WILD-TYPE" 
[1] "hr=" "1.3"
D13V2, continuous
D13V3, binary
[1] "tbl2"
                                cls
clus                             [,1] [,2]
  AMP PEAK 13(XP11.22) MUTATED      6    8
  AMP PEAK 13(XP11.22) WILD-TYPE   56   75
        clus
vv       AMP PEAK 13(XP11.22) MUTATED AMP PEAK 13(XP11.22) WILD-TYPE
  FEMALE                            6                             56
  MALE                              8                             75
D13V4, continuous
D13V5, multiclass
                   clus
vv                  AMP PEAK 13(XP11.22) MUTATED AMP PEAK 13(XP11.22) WILD-TYPE
  ASTROCYTOMA                                  7                             43
  OLIGOASTROCYTOMA                             4                             32
  OLIGODENDROGLIOMA                            3                             55
D13V6, binary
[1] "tbl2"
                                cls
clus                             [,1] [,2]
  AMP PEAK 13(XP11.22) MUTATED      3   11
  AMP PEAK 13(XP11.22) WILD-TYPE   56   75
     clus
vv    AMP PEAK 13(XP11.22) MUTATED AMP PEAK 13(XP11.22) WILD-TYPE
  NO                            11                             75
  YES                            3                             56
D13V7, binary
[1] "tbl2"
                                cls
clus                             [,1] [,2]
  AMP PEAK 13(XP11.22) MUTATED      4   10
  AMP PEAK 13(XP11.22) WILD-TYPE   70   61
     clus
vv    AMP PEAK 13(XP11.22) MUTATED AMP PEAK 13(XP11.22) WILD-TYPE
  NO                            10                             61
  YES                            4                             70

Clustering(14) Variable = Amp Peak 14(Xq11.2) mutation analysis
D14V1, survival
                   TCGA-CS-4938                    TCGA-CS-4941 
  "AMP PEAK 14(XQ11.2) MUTATED" "AMP PEAK 14(XQ11.2) WILD-TYPE" 
                   TCGA-CS-4942                    TCGA-CS-4943 
"AMP PEAK 14(XQ11.2) WILD-TYPE" "AMP PEAK 14(XQ11.2) WILD-TYPE" 
                   TCGA-CS-4944                    TCGA-CS-5390 
"AMP PEAK 14(XQ11.2) WILD-TYPE" "AMP PEAK 14(XQ11.2) WILD-TYPE" 
                   TCGA-CS-5393                    TCGA-CS-5394 
"AMP PEAK 14(XQ11.2) WILD-TYPE" "AMP PEAK 14(XQ11.2) WILD-TYPE" 
                   TCGA-CS-5395                    TCGA-CS-5396 
"AMP PEAK 14(XQ11.2) WILD-TYPE" "AMP PEAK 14(XQ11.2) WILD-TYPE" 
                   TCGA-CS-5397                    TCGA-CS-6186 
"AMP PEAK 14(XQ11.2) WILD-TYPE" "AMP PEAK 14(XQ11.2) WILD-TYPE" 
                   TCGA-CS-6188                    TCGA-CS-6290 
"AMP PEAK 14(XQ11.2) WILD-TYPE" "AMP PEAK 14(XQ11.2) WILD-TYPE" 
                   TCGA-CS-6665                    TCGA-CS-6666 
  "AMP PEAK 14(XQ11.2) MUTATED" "AMP PEAK 14(XQ11.2) WILD-TYPE" 
                   TCGA-CS-6667                    TCGA-CS-6668 
  "AMP PEAK 14(XQ11.2) MUTATED" "AMP PEAK 14(XQ11.2) WILD-TYPE" 
                   TCGA-CS-6669                    TCGA-CS-6670 
"AMP PEAK 14(XQ11.2) WILD-TYPE" "AMP PEAK 14(XQ11.2) WILD-TYPE" 
                   TCGA-DB-5270                    TCGA-DB-5273 
"AMP PEAK 14(XQ11.2) WILD-TYPE" "AMP PEAK 14(XQ11.2) WILD-TYPE" 
                   TCGA-DB-5274                    TCGA-DB-5275 
"AMP PEAK 14(XQ11.2) WILD-TYPE" "AMP PEAK 14(XQ11.2) WILD-TYPE" 
                   TCGA-DB-5276                    TCGA-DB-5277 
"AMP PEAK 14(XQ11.2) WILD-TYPE"   "AMP PEAK 14(XQ11.2) MUTATED" 
                   TCGA-DB-5278                    TCGA-DB-5279 
"AMP PEAK 14(XQ11.2) WILD-TYPE" "AMP PEAK 14(XQ11.2) WILD-TYPE" 
                   TCGA-DB-5280                    TCGA-DB-5281 
"AMP PEAK 14(XQ11.2) WILD-TYPE"   "AMP PEAK 14(XQ11.2) MUTATED" 
                   TCGA-DH-5140                    TCGA-DH-5141 
"AMP PEAK 14(XQ11.2) WILD-TYPE" "AMP PEAK 14(XQ11.2) WILD-TYPE" 
                   TCGA-DH-5142                    TCGA-DH-5143 
  "AMP PEAK 14(XQ11.2) MUTATED" "AMP PEAK 14(XQ11.2) WILD-TYPE" 
                   TCGA-DH-5144                    TCGA-DU-5847 
"AMP PEAK 14(XQ11.2) WILD-TYPE" "AMP PEAK 14(XQ11.2) WILD-TYPE" 
                   TCGA-DU-5849                    TCGA-DU-5851 
"AMP PEAK 14(XQ11.2) WILD-TYPE" "AMP PEAK 14(XQ11.2) WILD-TYPE" 
                   TCGA-DU-5852                    TCGA-DU-5853 
"AMP PEAK 14(XQ11.2) WILD-TYPE" "AMP PEAK 14(XQ11.2) WILD-TYPE" 
                   TCGA-DU-5854                    TCGA-DU-5855 
"AMP PEAK 14(XQ11.2) WILD-TYPE" "AMP PEAK 14(XQ11.2) WILD-TYPE" 
                   TCGA-DU-5870                    TCGA-DU-5871 
"AMP PEAK 14(XQ11.2) WILD-TYPE"   "AMP PEAK 14(XQ11.2) MUTATED" 
                   TCGA-DU-5872                    TCGA-DU-5874 
"AMP PEAK 14(XQ11.2) WILD-TYPE" "AMP PEAK 14(XQ11.2) WILD-TYPE" 
                   TCGA-DU-6392                    TCGA-DU-6393 
"AMP PEAK 14(XQ11.2) WILD-TYPE" "AMP PEAK 14(XQ11.2) WILD-TYPE" 
                   TCGA-DU-6394                    TCGA-DU-6395 
"AMP PEAK 14(XQ11.2) WILD-TYPE" "AMP PEAK 14(XQ11.2) WILD-TYPE" 
                   TCGA-DU-6396                    TCGA-DU-6397 
  "AMP PEAK 14(XQ11.2) MUTATED" "AMP PEAK 14(XQ11.2) WILD-TYPE" 
                   TCGA-DU-6399                    TCGA-DU-6400 
"AMP PEAK 14(XQ11.2) WILD-TYPE" "AMP PEAK 14(XQ11.2) WILD-TYPE" 
                   TCGA-DU-6401                    TCGA-DU-6402 
  "AMP PEAK 14(XQ11.2) MUTATED" "AMP PEAK 14(XQ11.2) WILD-TYPE" 
                   TCGA-DU-6403                    TCGA-DU-6404 
"AMP PEAK 14(XQ11.2) WILD-TYPE" "AMP PEAK 14(XQ11.2) WILD-TYPE" 
                   TCGA-DU-6405                    TCGA-DU-6406 
"AMP PEAK 14(XQ11.2) WILD-TYPE" "AMP PEAK 14(XQ11.2) WILD-TYPE" 
                   TCGA-DU-6407                    TCGA-DU-6408 
  "AMP PEAK 14(XQ11.2) MUTATED" "AMP PEAK 14(XQ11.2) WILD-TYPE" 
                   TCGA-DU-6410                    TCGA-DU-6542 
"AMP PEAK 14(XQ11.2) WILD-TYPE"   "AMP PEAK 14(XQ11.2) MUTATED" 
                   TCGA-DU-7006                    TCGA-DU-7007 
"AMP PEAK 14(XQ11.2) WILD-TYPE"   "AMP PEAK 14(XQ11.2) MUTATED" 
                   TCGA-DU-7008                    TCGA-DU-7009 
"AMP PEAK 14(XQ11.2) WILD-TYPE" "AMP PEAK 14(XQ11.2) WILD-TYPE" 
                   TCGA-DU-7010                    TCGA-DU-7011 
"AMP PEAK 14(XQ11.2) WILD-TYPE" "AMP PEAK 14(XQ11.2) WILD-TYPE" 
                   TCGA-DU-7012                    TCGA-DU-7013 
"AMP PEAK 14(XQ11.2) WILD-TYPE" "AMP PEAK 14(XQ11.2) WILD-TYPE" 
                   TCGA-DU-7014                    TCGA-DU-7015 
  "AMP PEAK 14(XQ11.2) MUTATED" "AMP PEAK 14(XQ11.2) WILD-TYPE" 
                   TCGA-DU-7018                    TCGA-DU-7019 
"AMP PEAK 14(XQ11.2) WILD-TYPE" "AMP PEAK 14(XQ11.2) WILD-TYPE" 
                   TCGA-DU-7290                    TCGA-DU-7292 
"AMP PEAK 14(XQ11.2) WILD-TYPE" "AMP PEAK 14(XQ11.2) WILD-TYPE" 
                   TCGA-DU-7294                    TCGA-DU-7298 
"AMP PEAK 14(XQ11.2) WILD-TYPE" "AMP PEAK 14(XQ11.2) WILD-TYPE" 
                   TCGA-DU-7299                    TCGA-DU-7300 
"AMP PEAK 14(XQ11.2) WILD-TYPE" "AMP PEAK 14(XQ11.2) WILD-TYPE" 
                   TCGA-DU-7301                    TCGA-DU-7302 
"AMP PEAK 14(XQ11.2) WILD-TYPE" "AMP PEAK 14(XQ11.2) WILD-TYPE" 
                   TCGA-DU-7304                    TCGA-DU-7306 
"AMP PEAK 14(XQ11.2) WILD-TYPE" "AMP PEAK 14(XQ11.2) WILD-TYPE" 
                   TCGA-DU-7309                    TCGA-E1-5302 
"AMP PEAK 14(XQ11.2) WILD-TYPE" "AMP PEAK 14(XQ11.2) WILD-TYPE" 
                   TCGA-E1-5303                    TCGA-E1-5304 
"AMP PEAK 14(XQ11.2) WILD-TYPE" "AMP PEAK 14(XQ11.2) WILD-TYPE" 
                   TCGA-E1-5305                    TCGA-E1-5307 
"AMP PEAK 14(XQ11.2) WILD-TYPE"   "AMP PEAK 14(XQ11.2) MUTATED" 
                   TCGA-E1-5311                    TCGA-E1-5318 
"AMP PEAK 14(XQ11.2) WILD-TYPE" "AMP PEAK 14(XQ11.2) WILD-TYPE" 
                   TCGA-E1-5319                    TCGA-E1-5322 
"AMP PEAK 14(XQ11.2) WILD-TYPE"   "AMP PEAK 14(XQ11.2) MUTATED" 
                   TCGA-EZ-7264                    TCGA-FG-5962 
"AMP PEAK 14(XQ11.2) WILD-TYPE" "AMP PEAK 14(XQ11.2) WILD-TYPE" 
                   TCGA-FG-5963                    TCGA-FG-5964 
"AMP PEAK 14(XQ11.2) WILD-TYPE" "AMP PEAK 14(XQ11.2) WILD-TYPE" 
                   TCGA-FG-5965                    TCGA-FG-6688 
"AMP PEAK 14(XQ11.2) WILD-TYPE" "AMP PEAK 14(XQ11.2) WILD-TYPE" 
                   TCGA-FG-6689                    TCGA-FG-6690 
"AMP PEAK 14(XQ11.2) WILD-TYPE" "AMP PEAK 14(XQ11.2) WILD-TYPE" 
                   TCGA-FG-6691                    TCGA-FG-6692 
"AMP PEAK 14(XQ11.2) WILD-TYPE" "AMP PEAK 14(XQ11.2) WILD-TYPE" 
                   TCGA-FG-7634                    TCGA-FG-7636 
"AMP PEAK 14(XQ11.2) WILD-TYPE"   "AMP PEAK 14(XQ11.2) MUTATED" 
                   TCGA-FG-7638                    TCGA-FG-7643 
"AMP PEAK 14(XQ11.2) WILD-TYPE" "AMP PEAK 14(XQ11.2) WILD-TYPE" 
                   TCGA-FN-7833                    TCGA-HT-7467 
"AMP PEAK 14(XQ11.2) WILD-TYPE" "AMP PEAK 14(XQ11.2) WILD-TYPE" 
                   TCGA-HT-7468                    TCGA-HT-7470 
"AMP PEAK 14(XQ11.2) WILD-TYPE" "AMP PEAK 14(XQ11.2) WILD-TYPE" 
                   TCGA-HT-7472                    TCGA-HT-7473 
"AMP PEAK 14(XQ11.2) WILD-TYPE" "AMP PEAK 14(XQ11.2) WILD-TYPE" 
                   TCGA-HT-7474                    TCGA-HT-7475 
"AMP PEAK 14(XQ11.2) WILD-TYPE" "AMP PEAK 14(XQ11.2) WILD-TYPE" 
                   TCGA-HT-7476                    TCGA-HT-7478 
  "AMP PEAK 14(XQ11.2) MUTATED" "AMP PEAK 14(XQ11.2) WILD-TYPE" 
                   TCGA-HT-7479                    TCGA-HT-7480 
"AMP PEAK 14(XQ11.2) WILD-TYPE" "AMP PEAK 14(XQ11.2) WILD-TYPE" 
                   TCGA-HT-7481                    TCGA-HT-7482 
"AMP PEAK 14(XQ11.2) WILD-TYPE" "AMP PEAK 14(XQ11.2) WILD-TYPE" 
                   TCGA-HT-7483                    TCGA-HT-7485 
"AMP PEAK 14(XQ11.2) WILD-TYPE" "AMP PEAK 14(XQ11.2) WILD-TYPE" 
                   TCGA-HT-7601                    TCGA-HT-7602 
"AMP PEAK 14(XQ11.2) WILD-TYPE" "AMP PEAK 14(XQ11.2) WILD-TYPE" 
                   TCGA-HT-7603                    TCGA-HT-7604 
"AMP PEAK 14(XQ11.2) WILD-TYPE" "AMP PEAK 14(XQ11.2) WILD-TYPE" 
                   TCGA-HT-7605                    TCGA-HT-7606 
"AMP PEAK 14(XQ11.2) WILD-TYPE" "AMP PEAK 14(XQ11.2) WILD-TYPE" 
                   TCGA-HT-7607                    TCGA-HT-7608 
"AMP PEAK 14(XQ11.2) WILD-TYPE" "AMP PEAK 14(XQ11.2) WILD-TYPE" 
                   TCGA-HT-7609                    TCGA-HT-7610 
  "AMP PEAK 14(XQ11.2) MUTATED" "AMP PEAK 14(XQ11.2) WILD-TYPE" 
                   TCGA-HW-7486                    TCGA-HW-7487 
"AMP PEAK 14(XQ11.2) WILD-TYPE" "AMP PEAK 14(XQ11.2) WILD-TYPE" 
                   TCGA-HW-7489                    TCGA-HW-7490 
"AMP PEAK 14(XQ11.2) WILD-TYPE" "AMP PEAK 14(XQ11.2) WILD-TYPE" 
                   TCGA-HW-7491                    TCGA-HW-7493 
"AMP PEAK 14(XQ11.2) WILD-TYPE"   "AMP PEAK 14(XQ11.2) MUTATED" 
                   TCGA-HW-7495                    TCGA-IK-7675 
"AMP PEAK 14(XQ11.2) WILD-TYPE" "AMP PEAK 14(XQ11.2) WILD-TYPE" 
                   TCGA-IK-8125 
"AMP PEAK 14(XQ11.2) WILD-TYPE" 
                   TCGA-CS-4938                    TCGA-CS-4941 
  "AMP PEAK 14(XQ11.2) MUTATED" "AMP PEAK 14(XQ11.2) WILD-TYPE" 
                   TCGA-CS-4942                    TCGA-CS-4943 
"AMP PEAK 14(XQ11.2) WILD-TYPE" "AMP PEAK 14(XQ11.2) WILD-TYPE" 
                   TCGA-CS-4944                    TCGA-CS-5390 
"AMP PEAK 14(XQ11.2) WILD-TYPE" "AMP PEAK 14(XQ11.2) WILD-TYPE" 
                   TCGA-CS-5393                    TCGA-CS-5394 
"AMP PEAK 14(XQ11.2) WILD-TYPE" "AMP PEAK 14(XQ11.2) WILD-TYPE" 
                   TCGA-CS-5395                    TCGA-CS-5396 
"AMP PEAK 14(XQ11.2) WILD-TYPE" "AMP PEAK 14(XQ11.2) WILD-TYPE" 
                   TCGA-CS-5397                    TCGA-CS-6186 
"AMP PEAK 14(XQ11.2) WILD-TYPE" "AMP PEAK 14(XQ11.2) WILD-TYPE" 
                   TCGA-CS-6188                    TCGA-CS-6290 
"AMP PEAK 14(XQ11.2) WILD-TYPE" "AMP PEAK 14(XQ11.2) WILD-TYPE" 
                   TCGA-CS-6665                    TCGA-CS-6666 
  "AMP PEAK 14(XQ11.2) MUTATED" "AMP PEAK 14(XQ11.2) WILD-TYPE" 
                   TCGA-CS-6667                    TCGA-CS-6668 
  "AMP PEAK 14(XQ11.2) MUTATED" "AMP PEAK 14(XQ11.2) WILD-TYPE" 
                   TCGA-CS-6669                    TCGA-CS-6670 
"AMP PEAK 14(XQ11.2) WILD-TYPE" "AMP PEAK 14(XQ11.2) WILD-TYPE" 
                   TCGA-DB-5270                    TCGA-DB-5273 
"AMP PEAK 14(XQ11.2) WILD-TYPE" "AMP PEAK 14(XQ11.2) WILD-TYPE" 
                   TCGA-DB-5274                    TCGA-DB-5275 
"AMP PEAK 14(XQ11.2) WILD-TYPE" "AMP PEAK 14(XQ11.2) WILD-TYPE" 
                   TCGA-DB-5276                    TCGA-DB-5277 
"AMP PEAK 14(XQ11.2) WILD-TYPE"   "AMP PEAK 14(XQ11.2) MUTATED" 
                   TCGA-DB-5278                    TCGA-DB-5279 
"AMP PEAK 14(XQ11.2) WILD-TYPE" "AMP PEAK 14(XQ11.2) WILD-TYPE" 
                   TCGA-DB-5280                    TCGA-DB-5281 
"AMP PEAK 14(XQ11.2) WILD-TYPE"   "AMP PEAK 14(XQ11.2) MUTATED" 
                   TCGA-DH-5140                    TCGA-DH-5141 
"AMP PEAK 14(XQ11.2) WILD-TYPE" "AMP PEAK 14(XQ11.2) WILD-TYPE" 
                   TCGA-DH-5142                    TCGA-DH-5143 
  "AMP PEAK 14(XQ11.2) MUTATED" "AMP PEAK 14(XQ11.2) WILD-TYPE" 
                   TCGA-DH-5144                    TCGA-DU-5847 
"AMP PEAK 14(XQ11.2) WILD-TYPE" "AMP PEAK 14(XQ11.2) WILD-TYPE" 
                   TCGA-DU-5849                    TCGA-DU-5851 
"AMP PEAK 14(XQ11.2) WILD-TYPE" "AMP PEAK 14(XQ11.2) WILD-TYPE" 
                   TCGA-DU-5852                    TCGA-DU-5853 
"AMP PEAK 14(XQ11.2) WILD-TYPE" "AMP PEAK 14(XQ11.2) WILD-TYPE" 
                   TCGA-DU-5854                    TCGA-DU-5855 
"AMP PEAK 14(XQ11.2) WILD-TYPE" "AMP PEAK 14(XQ11.2) WILD-TYPE" 
                   TCGA-DU-5870                    TCGA-DU-5871 
"AMP PEAK 14(XQ11.2) WILD-TYPE"   "AMP PEAK 14(XQ11.2) MUTATED" 
                   TCGA-DU-5872                    TCGA-DU-5874 
"AMP PEAK 14(XQ11.2) WILD-TYPE" "AMP PEAK 14(XQ11.2) WILD-TYPE" 
                   TCGA-DU-6392                    TCGA-DU-6393 
"AMP PEAK 14(XQ11.2) WILD-TYPE" "AMP PEAK 14(XQ11.2) WILD-TYPE" 
                   TCGA-DU-6394                    TCGA-DU-6395 
"AMP PEAK 14(XQ11.2) WILD-TYPE" "AMP PEAK 14(XQ11.2) WILD-TYPE" 
                   TCGA-DU-6396                    TCGA-DU-6397 
  "AMP PEAK 14(XQ11.2) MUTATED" "AMP PEAK 14(XQ11.2) WILD-TYPE" 
                   TCGA-DU-6399                    TCGA-DU-6400 
"AMP PEAK 14(XQ11.2) WILD-TYPE" "AMP PEAK 14(XQ11.2) WILD-TYPE" 
                   TCGA-DU-6401                    TCGA-DU-6402 
  "AMP PEAK 14(XQ11.2) MUTATED" "AMP PEAK 14(XQ11.2) WILD-TYPE" 
                   TCGA-DU-6403                    TCGA-DU-6404 
"AMP PEAK 14(XQ11.2) WILD-TYPE" "AMP PEAK 14(XQ11.2) WILD-TYPE" 
                   TCGA-DU-6405                    TCGA-DU-6406 
"AMP PEAK 14(XQ11.2) WILD-TYPE" "AMP PEAK 14(XQ11.2) WILD-TYPE" 
                   TCGA-DU-6407                    TCGA-DU-6408 
  "AMP PEAK 14(XQ11.2) MUTATED" "AMP PEAK 14(XQ11.2) WILD-TYPE" 
                   TCGA-DU-6410                    TCGA-DU-6542 
"AMP PEAK 14(XQ11.2) WILD-TYPE"   "AMP PEAK 14(XQ11.2) MUTATED" 
                   TCGA-DU-7006                    TCGA-DU-7007 
"AMP PEAK 14(XQ11.2) WILD-TYPE"   "AMP PEAK 14(XQ11.2) MUTATED" 
                   TCGA-DU-7008                    TCGA-DU-7009 
"AMP PEAK 14(XQ11.2) WILD-TYPE" "AMP PEAK 14(XQ11.2) WILD-TYPE" 
                   TCGA-DU-7010                    TCGA-DU-7011 
"AMP PEAK 14(XQ11.2) WILD-TYPE" "AMP PEAK 14(XQ11.2) WILD-TYPE" 
                   TCGA-DU-7012                    TCGA-DU-7013 
"AMP PEAK 14(XQ11.2) WILD-TYPE" "AMP PEAK 14(XQ11.2) WILD-TYPE" 
                   TCGA-DU-7014                    TCGA-DU-7015 
  "AMP PEAK 14(XQ11.2) MUTATED" "AMP PEAK 14(XQ11.2) WILD-TYPE" 
                   TCGA-DU-7018                    TCGA-DU-7019 
"AMP PEAK 14(XQ11.2) WILD-TYPE" "AMP PEAK 14(XQ11.2) WILD-TYPE" 
                   TCGA-DU-7290                    TCGA-DU-7292 
"AMP PEAK 14(XQ11.2) WILD-TYPE" "AMP PEAK 14(XQ11.2) WILD-TYPE" 
                   TCGA-DU-7294                    TCGA-DU-7298 
"AMP PEAK 14(XQ11.2) WILD-TYPE" "AMP PEAK 14(XQ11.2) WILD-TYPE" 
                   TCGA-DU-7299                    TCGA-DU-7300 
"AMP PEAK 14(XQ11.2) WILD-TYPE" "AMP PEAK 14(XQ11.2) WILD-TYPE" 
                   TCGA-DU-7301                    TCGA-DU-7302 
"AMP PEAK 14(XQ11.2) WILD-TYPE" "AMP PEAK 14(XQ11.2) WILD-TYPE" 
                   TCGA-DU-7304                    TCGA-DU-7306 
"AMP PEAK 14(XQ11.2) WILD-TYPE" "AMP PEAK 14(XQ11.2) WILD-TYPE" 
                   TCGA-DU-7309                    TCGA-E1-5302 
"AMP PEAK 14(XQ11.2) WILD-TYPE" "AMP PEAK 14(XQ11.2) WILD-TYPE" 
                   TCGA-E1-5303                    TCGA-E1-5304 
"AMP PEAK 14(XQ11.2) WILD-TYPE" "AMP PEAK 14(XQ11.2) WILD-TYPE" 
                   TCGA-E1-5305                    TCGA-E1-5307 
"AMP PEAK 14(XQ11.2) WILD-TYPE"   "AMP PEAK 14(XQ11.2) MUTATED" 
                   TCGA-E1-5311                    TCGA-E1-5318 
"AMP PEAK 14(XQ11.2) WILD-TYPE" "AMP PEAK 14(XQ11.2) WILD-TYPE" 
                   TCGA-E1-5319                    TCGA-E1-5322 
"AMP PEAK 14(XQ11.2) WILD-TYPE"   "AMP PEAK 14(XQ11.2) MUTATED" 
                   TCGA-EZ-7264                    TCGA-FG-5962 
"AMP PEAK 14(XQ11.2) WILD-TYPE" "AMP PEAK 14(XQ11.2) WILD-TYPE" 
                   TCGA-FG-5963                    TCGA-FG-5964 
"AMP PEAK 14(XQ11.2) WILD-TYPE" "AMP PEAK 14(XQ11.2) WILD-TYPE" 
                   TCGA-FG-5965                    TCGA-FG-6688 
"AMP PEAK 14(XQ11.2) WILD-TYPE" "AMP PEAK 14(XQ11.2) WILD-TYPE" 
                   TCGA-FG-6689                    TCGA-FG-6690 
"AMP PEAK 14(XQ11.2) WILD-TYPE" "AMP PEAK 14(XQ11.2) WILD-TYPE" 
                   TCGA-FG-6691                    TCGA-FG-6692 
"AMP PEAK 14(XQ11.2) WILD-TYPE" "AMP PEAK 14(XQ11.2) WILD-TYPE" 
                   TCGA-FG-7634                    TCGA-FG-7636 
"AMP PEAK 14(XQ11.2) WILD-TYPE"   "AMP PEAK 14(XQ11.2) MUTATED" 
                   TCGA-FG-7638                    TCGA-FG-7643 
"AMP PEAK 14(XQ11.2) WILD-TYPE" "AMP PEAK 14(XQ11.2) WILD-TYPE" 
                   TCGA-FN-7833                    TCGA-HT-7467 
"AMP PEAK 14(XQ11.2) WILD-TYPE" "AMP PEAK 14(XQ11.2) WILD-TYPE" 
                   TCGA-HT-7468                    TCGA-HT-7470 
"AMP PEAK 14(XQ11.2) WILD-TYPE" "AMP PEAK 14(XQ11.2) WILD-TYPE" 
                   TCGA-HT-7472                    TCGA-HT-7473 
"AMP PEAK 14(XQ11.2) WILD-TYPE" "AMP PEAK 14(XQ11.2) WILD-TYPE" 
                   TCGA-HT-7474                    TCGA-HT-7475 
"AMP PEAK 14(XQ11.2) WILD-TYPE" "AMP PEAK 14(XQ11.2) WILD-TYPE" 
                   TCGA-HT-7476                    TCGA-HT-7478 
  "AMP PEAK 14(XQ11.2) MUTATED" "AMP PEAK 14(XQ11.2) WILD-TYPE" 
                   TCGA-HT-7479                    TCGA-HT-7480 
"AMP PEAK 14(XQ11.2) WILD-TYPE" "AMP PEAK 14(XQ11.2) WILD-TYPE" 
                   TCGA-HT-7481                    TCGA-HT-7482 
"AMP PEAK 14(XQ11.2) WILD-TYPE" "AMP PEAK 14(XQ11.2) WILD-TYPE" 
                   TCGA-HT-7483                    TCGA-HT-7485 
"AMP PEAK 14(XQ11.2) WILD-TYPE" "AMP PEAK 14(XQ11.2) WILD-TYPE" 
                   TCGA-HT-7601                    TCGA-HT-7602 
"AMP PEAK 14(XQ11.2) WILD-TYPE" "AMP PEAK 14(XQ11.2) WILD-TYPE" 
                   TCGA-HT-7603                    TCGA-HT-7604 
"AMP PEAK 14(XQ11.2) WILD-TYPE" "AMP PEAK 14(XQ11.2) WILD-TYPE" 
                   TCGA-HT-7605                    TCGA-HT-7606 
"AMP PEAK 14(XQ11.2) WILD-TYPE" "AMP PEAK 14(XQ11.2) WILD-TYPE" 
                   TCGA-HT-7607                    TCGA-HT-7608 
"AMP PEAK 14(XQ11.2) WILD-TYPE" "AMP PEAK 14(XQ11.2) WILD-TYPE" 
                   TCGA-HT-7609                    TCGA-HT-7610 
  "AMP PEAK 14(XQ11.2) MUTATED" "AMP PEAK 14(XQ11.2) WILD-TYPE" 
                   TCGA-HW-7486                    TCGA-HW-7487 
"AMP PEAK 14(XQ11.2) WILD-TYPE" "AMP PEAK 14(XQ11.2) WILD-TYPE" 
                   TCGA-HW-7489                    TCGA-HW-7490 
"AMP PEAK 14(XQ11.2) WILD-TYPE" "AMP PEAK 14(XQ11.2) WILD-TYPE" 
                   TCGA-HW-7491                    TCGA-HW-7493 
"AMP PEAK 14(XQ11.2) WILD-TYPE"   "AMP PEAK 14(XQ11.2) MUTATED" 
                   TCGA-HW-7495                    TCGA-IK-7675 
"AMP PEAK 14(XQ11.2) WILD-TYPE" "AMP PEAK 14(XQ11.2) WILD-TYPE" 
                   TCGA-IK-8125 
"AMP PEAK 14(XQ11.2) WILD-TYPE" 
                   TCGA-CS-4938                    TCGA-CS-4941 
  "AMP PEAK 14(XQ11.2) MUTATED" "AMP PEAK 14(XQ11.2) WILD-TYPE" 
                   TCGA-CS-4942                    TCGA-CS-4943 
"AMP PEAK 14(XQ11.2) WILD-TYPE" "AMP PEAK 14(XQ11.2) WILD-TYPE" 
                   TCGA-CS-4944                    TCGA-CS-5390 
"AMP PEAK 14(XQ11.2) WILD-TYPE" "AMP PEAK 14(XQ11.2) WILD-TYPE" 
                   TCGA-CS-5393                    TCGA-CS-5394 
"AMP PEAK 14(XQ11.2) WILD-TYPE" "AMP PEAK 14(XQ11.2) WILD-TYPE" 
                   TCGA-CS-5395                    TCGA-CS-5396 
"AMP PEAK 14(XQ11.2) WILD-TYPE" "AMP PEAK 14(XQ11.2) WILD-TYPE" 
                   TCGA-CS-5397                    TCGA-CS-6186 
"AMP PEAK 14(XQ11.2) WILD-TYPE" "AMP PEAK 14(XQ11.2) WILD-TYPE" 
                   TCGA-CS-6188                    TCGA-CS-6290 
"AMP PEAK 14(XQ11.2) WILD-TYPE" "AMP PEAK 14(XQ11.2) WILD-TYPE" 
                   TCGA-CS-6665                    TCGA-CS-6666 
  "AMP PEAK 14(XQ11.2) MUTATED" "AMP PEAK 14(XQ11.2) WILD-TYPE" 
                   TCGA-CS-6667                    TCGA-CS-6668 
  "AMP PEAK 14(XQ11.2) MUTATED" "AMP PEAK 14(XQ11.2) WILD-TYPE" 
                   TCGA-CS-6669                    TCGA-CS-6670 
"AMP PEAK 14(XQ11.2) WILD-TYPE" "AMP PEAK 14(XQ11.2) WILD-TYPE" 
                   TCGA-DB-5270                    TCGA-DB-5273 
"AMP PEAK 14(XQ11.2) WILD-TYPE" "AMP PEAK 14(XQ11.2) WILD-TYPE" 
                   TCGA-DB-5274                    TCGA-DB-5275 
"AMP PEAK 14(XQ11.2) WILD-TYPE" "AMP PEAK 14(XQ11.2) WILD-TYPE" 
                   TCGA-DB-5276                    TCGA-DB-5277 
"AMP PEAK 14(XQ11.2) WILD-TYPE"   "AMP PEAK 14(XQ11.2) MUTATED" 
                   TCGA-DB-5278                    TCGA-DB-5279 
"AMP PEAK 14(XQ11.2) WILD-TYPE" "AMP PEAK 14(XQ11.2) WILD-TYPE" 
                   TCGA-DB-5280                    TCGA-DB-5281 
"AMP PEAK 14(XQ11.2) WILD-TYPE"   "AMP PEAK 14(XQ11.2) MUTATED" 
                   TCGA-DH-5140                    TCGA-DH-5141 
"AMP PEAK 14(XQ11.2) WILD-TYPE" "AMP PEAK 14(XQ11.2) WILD-TYPE" 
                   TCGA-DH-5142                    TCGA-DH-5143 
  "AMP PEAK 14(XQ11.2) MUTATED" "AMP PEAK 14(XQ11.2) WILD-TYPE" 
                   TCGA-DH-5144                    TCGA-DU-5847 
"AMP PEAK 14(XQ11.2) WILD-TYPE" "AMP PEAK 14(XQ11.2) WILD-TYPE" 
                   TCGA-DU-5849                    TCGA-DU-5851 
"AMP PEAK 14(XQ11.2) WILD-TYPE" "AMP PEAK 14(XQ11.2) WILD-TYPE" 
                   TCGA-DU-5852                    TCGA-DU-5853 
"AMP PEAK 14(XQ11.2) WILD-TYPE" "AMP PEAK 14(XQ11.2) WILD-TYPE" 
                   TCGA-DU-5854                    TCGA-DU-5855 
"AMP PEAK 14(XQ11.2) WILD-TYPE" "AMP PEAK 14(XQ11.2) WILD-TYPE" 
                   TCGA-DU-5870                    TCGA-DU-5871 
"AMP PEAK 14(XQ11.2) WILD-TYPE"   "AMP PEAK 14(XQ11.2) MUTATED" 
                   TCGA-DU-5872                    TCGA-DU-5874 
"AMP PEAK 14(XQ11.2) WILD-TYPE" "AMP PEAK 14(XQ11.2) WILD-TYPE" 
                   TCGA-DU-6392                    TCGA-DU-6393 
"AMP PEAK 14(XQ11.2) WILD-TYPE" "AMP PEAK 14(XQ11.2) WILD-TYPE" 
                   TCGA-DU-6394                    TCGA-DU-6395 
"AMP PEAK 14(XQ11.2) WILD-TYPE" "AMP PEAK 14(XQ11.2) WILD-TYPE" 
                   TCGA-DU-6396                    TCGA-DU-6397 
  "AMP PEAK 14(XQ11.2) MUTATED" "AMP PEAK 14(XQ11.2) WILD-TYPE" 
                   TCGA-DU-6399                    TCGA-DU-6400 
"AMP PEAK 14(XQ11.2) WILD-TYPE" "AMP PEAK 14(XQ11.2) WILD-TYPE" 
                   TCGA-DU-6401                    TCGA-DU-6402 
  "AMP PEAK 14(XQ11.2) MUTATED" "AMP PEAK 14(XQ11.2) WILD-TYPE" 
                   TCGA-DU-6403                    TCGA-DU-6404 
"AMP PEAK 14(XQ11.2) WILD-TYPE" "AMP PEAK 14(XQ11.2) WILD-TYPE" 
                   TCGA-DU-6405                    TCGA-DU-6406 
"AMP PEAK 14(XQ11.2) WILD-TYPE" "AMP PEAK 14(XQ11.2) WILD-TYPE" 
                   TCGA-DU-6407                    TCGA-DU-6408 
  "AMP PEAK 14(XQ11.2) MUTATED" "AMP PEAK 14(XQ11.2) WILD-TYPE" 
                   TCGA-DU-6410                    TCGA-DU-6542 
"AMP PEAK 14(XQ11.2) WILD-TYPE"   "AMP PEAK 14(XQ11.2) MUTATED" 
                   TCGA-DU-7006                    TCGA-DU-7007 
"AMP PEAK 14(XQ11.2) WILD-TYPE"   "AMP PEAK 14(XQ11.2) MUTATED" 
                   TCGA-DU-7008                    TCGA-DU-7009 
"AMP PEAK 14(XQ11.2) WILD-TYPE" "AMP PEAK 14(XQ11.2) WILD-TYPE" 
                   TCGA-DU-7010                    TCGA-DU-7011 
"AMP PEAK 14(XQ11.2) WILD-TYPE" "AMP PEAK 14(XQ11.2) WILD-TYPE" 
                   TCGA-DU-7012                    TCGA-DU-7013 
"AMP PEAK 14(XQ11.2) WILD-TYPE" "AMP PEAK 14(XQ11.2) WILD-TYPE" 
                   TCGA-DU-7014                    TCGA-DU-7015 
  "AMP PEAK 14(XQ11.2) MUTATED" "AMP PEAK 14(XQ11.2) WILD-TYPE" 
                   TCGA-DU-7018                    TCGA-DU-7019 
"AMP PEAK 14(XQ11.2) WILD-TYPE" "AMP PEAK 14(XQ11.2) WILD-TYPE" 
                   TCGA-DU-7290                    TCGA-DU-7292 
"AMP PEAK 14(XQ11.2) WILD-TYPE" "AMP PEAK 14(XQ11.2) WILD-TYPE" 
                   TCGA-DU-7294                    TCGA-DU-7298 
"AMP PEAK 14(XQ11.2) WILD-TYPE" "AMP PEAK 14(XQ11.2) WILD-TYPE" 
                   TCGA-DU-7299                    TCGA-DU-7300 
"AMP PEAK 14(XQ11.2) WILD-TYPE" "AMP PEAK 14(XQ11.2) WILD-TYPE" 
                   TCGA-DU-7301                    TCGA-DU-7302 
"AMP PEAK 14(XQ11.2) WILD-TYPE" "AMP PEAK 14(XQ11.2) WILD-TYPE" 
                   TCGA-DU-7304                    TCGA-DU-7306 
"AMP PEAK 14(XQ11.2) WILD-TYPE" "AMP PEAK 14(XQ11.2) WILD-TYPE" 
                   TCGA-DU-7309                    TCGA-E1-5302 
"AMP PEAK 14(XQ11.2) WILD-TYPE" "AMP PEAK 14(XQ11.2) WILD-TYPE" 
                   TCGA-E1-5303                    TCGA-E1-5304 
"AMP PEAK 14(XQ11.2) WILD-TYPE" "AMP PEAK 14(XQ11.2) WILD-TYPE" 
                   TCGA-E1-5305                    TCGA-E1-5307 
"AMP PEAK 14(XQ11.2) WILD-TYPE"   "AMP PEAK 14(XQ11.2) MUTATED" 
                   TCGA-E1-5311                    TCGA-E1-5318 
"AMP PEAK 14(XQ11.2) WILD-TYPE" "AMP PEAK 14(XQ11.2) WILD-TYPE" 
                   TCGA-E1-5319                    TCGA-E1-5322 
"AMP PEAK 14(XQ11.2) WILD-TYPE"   "AMP PEAK 14(XQ11.2) MUTATED" 
                   TCGA-EZ-7264                    TCGA-FG-5962 
"AMP PEAK 14(XQ11.2) WILD-TYPE" "AMP PEAK 14(XQ11.2) WILD-TYPE" 
                   TCGA-FG-5963                    TCGA-FG-5964 
"AMP PEAK 14(XQ11.2) WILD-TYPE" "AMP PEAK 14(XQ11.2) WILD-TYPE" 
                   TCGA-FG-5965                    TCGA-FG-6688 
"AMP PEAK 14(XQ11.2) WILD-TYPE" "AMP PEAK 14(XQ11.2) WILD-TYPE" 
                   TCGA-FG-6689                    TCGA-FG-6690 
"AMP PEAK 14(XQ11.2) WILD-TYPE" "AMP PEAK 14(XQ11.2) WILD-TYPE" 
                   TCGA-FG-6691                    TCGA-FG-6692 
"AMP PEAK 14(XQ11.2) WILD-TYPE" "AMP PEAK 14(XQ11.2) WILD-TYPE" 
                   TCGA-FG-7634                    TCGA-FG-7636 
"AMP PEAK 14(XQ11.2) WILD-TYPE"   "AMP PEAK 14(XQ11.2) MUTATED" 
                   TCGA-FG-7638                    TCGA-FG-7643 
"AMP PEAK 14(XQ11.2) WILD-TYPE" "AMP PEAK 14(XQ11.2) WILD-TYPE" 
                   TCGA-FN-7833                    TCGA-HT-7467 
"AMP PEAK 14(XQ11.2) WILD-TYPE" "AMP PEAK 14(XQ11.2) WILD-TYPE" 
                   TCGA-HT-7468                    TCGA-HT-7470 
"AMP PEAK 14(XQ11.2) WILD-TYPE" "AMP PEAK 14(XQ11.2) WILD-TYPE" 
                   TCGA-HT-7472                    TCGA-HT-7473 
"AMP PEAK 14(XQ11.2) WILD-TYPE" "AMP PEAK 14(XQ11.2) WILD-TYPE" 
                   TCGA-HT-7474                    TCGA-HT-7475 
"AMP PEAK 14(XQ11.2) WILD-TYPE" "AMP PEAK 14(XQ11.2) WILD-TYPE" 
                   TCGA-HT-7476                    TCGA-HT-7478 
  "AMP PEAK 14(XQ11.2) MUTATED" "AMP PEAK 14(XQ11.2) WILD-TYPE" 
                   TCGA-HT-7479                    TCGA-HT-7480 
"AMP PEAK 14(XQ11.2) WILD-TYPE" "AMP PEAK 14(XQ11.2) WILD-TYPE" 
                   TCGA-HT-7481                    TCGA-HT-7482 
"AMP PEAK 14(XQ11.2) WILD-TYPE" "AMP PEAK 14(XQ11.2) WILD-TYPE" 
                   TCGA-HT-7483                    TCGA-HT-7485 
"AMP PEAK 14(XQ11.2) WILD-TYPE" "AMP PEAK 14(XQ11.2) WILD-TYPE" 
                   TCGA-HT-7601                    TCGA-HT-7602 
"AMP PEAK 14(XQ11.2) WILD-TYPE" "AMP PEAK 14(XQ11.2) WILD-TYPE" 
                   TCGA-HT-7603                    TCGA-HT-7604 
"AMP PEAK 14(XQ11.2) WILD-TYPE" "AMP PEAK 14(XQ11.2) WILD-TYPE" 
                   TCGA-HT-7605                    TCGA-HT-7606 
"AMP PEAK 14(XQ11.2) WILD-TYPE" "AMP PEAK 14(XQ11.2) WILD-TYPE" 
                   TCGA-HT-7607                    TCGA-HT-7608 
"AMP PEAK 14(XQ11.2) WILD-TYPE" "AMP PEAK 14(XQ11.2) WILD-TYPE" 
                   TCGA-HT-7609                    TCGA-HT-7610 
  "AMP PEAK 14(XQ11.2) MUTATED" "AMP PEAK 14(XQ11.2) WILD-TYPE" 
                   TCGA-HW-7486                    TCGA-HW-7487 
"AMP PEAK 14(XQ11.2) WILD-TYPE" "AMP PEAK 14(XQ11.2) WILD-TYPE" 
                   TCGA-HW-7489                    TCGA-HW-7490 
"AMP PEAK 14(XQ11.2) WILD-TYPE" "AMP PEAK 14(XQ11.2) WILD-TYPE" 
                   TCGA-HW-7491                    TCGA-HW-7493 
"AMP PEAK 14(XQ11.2) WILD-TYPE"   "AMP PEAK 14(XQ11.2) MUTATED" 
                   TCGA-HW-7495                    TCGA-IK-7675 
"AMP PEAK 14(XQ11.2) WILD-TYPE" "AMP PEAK 14(XQ11.2) WILD-TYPE" 
                   TCGA-IK-8125 
"AMP PEAK 14(XQ11.2) WILD-TYPE" 
[1] "hr=" "1.2"
D14V2, continuous
D14V3, binary
[1] "tbl2"
                               cls
clus                            [,1] [,2]
  AMP PEAK 14(XQ11.2) MUTATED     10    9
  AMP PEAK 14(XQ11.2) WILD-TYPE   52   74
        clus
vv       AMP PEAK 14(XQ11.2) MUTATED AMP PEAK 14(XQ11.2) WILD-TYPE
  FEMALE                          10                            52
  MALE                             9                            74
D14V4, continuous
D14V5, multiclass
                   clus
vv                  AMP PEAK 14(XQ11.2) MUTATED AMP PEAK 14(XQ11.2) WILD-TYPE
  ASTROCYTOMA                                10                            40
  OLIGOASTROCYTOMA                            5                            31
  OLIGODENDROGLIOMA                           3                            55
D14V6, binary
[1] "tbl2"
                               cls
clus                            [,1] [,2]
  AMP PEAK 14(XQ11.2) MUTATED      5   14
  AMP PEAK 14(XQ11.2) WILD-TYPE   54   72
     clus
vv    AMP PEAK 14(XQ11.2) MUTATED AMP PEAK 14(XQ11.2) WILD-TYPE
  NO                           14                            72
  YES                           5                            54
D14V7, binary
[1] "tbl2"
                               cls
clus                            [,1] [,2]
  AMP PEAK 14(XQ11.2) MUTATED      8   11
  AMP PEAK 14(XQ11.2) WILD-TYPE   66   60
     clus
vv    AMP PEAK 14(XQ11.2) MUTATED AMP PEAK 14(XQ11.2) WILD-TYPE
  NO                           11                            60
  YES                           8                            66

Clustering(15) Variable = Del Peak  1(1p36.31) mutation analysis
D15V1, survival
                    TCGA-CS-4938                     TCGA-CS-4941 
"DEL PEAK  1(1P36.31) WILD-TYPE" "DEL PEAK  1(1P36.31) WILD-TYPE" 
                    TCGA-CS-4942                     TCGA-CS-4943 
"DEL PEAK  1(1P36.31) WILD-TYPE" "DEL PEAK  1(1P36.31) WILD-TYPE" 
                    TCGA-CS-4944                     TCGA-CS-5390 
"DEL PEAK  1(1P36.31) WILD-TYPE"   "DEL PEAK  1(1P36.31) MUTATED" 
                    TCGA-CS-5393                     TCGA-CS-5394 
"DEL PEAK  1(1P36.31) WILD-TYPE"   "DEL PEAK  1(1P36.31) MUTATED" 
                    TCGA-CS-5395                     TCGA-CS-5396 
"DEL PEAK  1(1P36.31) WILD-TYPE"   "DEL PEAK  1(1P36.31) MUTATED" 
                    TCGA-CS-5397                     TCGA-CS-6186 
"DEL PEAK  1(1P36.31) WILD-TYPE" "DEL PEAK  1(1P36.31) WILD-TYPE" 
                    TCGA-CS-6188                     TCGA-CS-6290 
"DEL PEAK  1(1P36.31) WILD-TYPE" "DEL PEAK  1(1P36.31) WILD-TYPE" 
                    TCGA-CS-6665                     TCGA-CS-6666 
"DEL PEAK  1(1P36.31) WILD-TYPE" "DEL PEAK  1(1P36.31) WILD-TYPE" 
                    TCGA-CS-6667                     TCGA-CS-6668 
"DEL PEAK  1(1P36.31) WILD-TYPE"   "DEL PEAK  1(1P36.31) MUTATED" 
                    TCGA-CS-6669                     TCGA-CS-6670 
"DEL PEAK  1(1P36.31) WILD-TYPE"   "DEL PEAK  1(1P36.31) MUTATED" 
                    TCGA-DB-5270                     TCGA-DB-5273 
"DEL PEAK  1(1P36.31) WILD-TYPE" "DEL PEAK  1(1P36.31) WILD-TYPE" 
                    TCGA-DB-5274                     TCGA-DB-5275 
  "DEL PEAK  1(1P36.31) MUTATED"   "DEL PEAK  1(1P36.31) MUTATED" 
                    TCGA-DB-5276                     TCGA-DB-5277 
"DEL PEAK  1(1P36.31) WILD-TYPE" "DEL PEAK  1(1P36.31) WILD-TYPE" 
                    TCGA-DB-5278                     TCGA-DB-5279 
  "DEL PEAK  1(1P36.31) MUTATED"   "DEL PEAK  1(1P36.31) MUTATED" 
                    TCGA-DB-5280                     TCGA-DB-5281 
"DEL PEAK  1(1P36.31) WILD-TYPE" "DEL PEAK  1(1P36.31) WILD-TYPE" 
                    TCGA-DH-5140                     TCGA-DH-5141 
"DEL PEAK  1(1P36.31) WILD-TYPE"   "DEL PEAK  1(1P36.31) MUTATED" 
                    TCGA-DH-5142                     TCGA-DH-5143 
"DEL PEAK  1(1P36.31) WILD-TYPE" "DEL PEAK  1(1P36.31) WILD-TYPE" 
                    TCGA-DH-5144                     TCGA-DU-5847 
  "DEL PEAK  1(1P36.31) MUTATED" "DEL PEAK  1(1P36.31) WILD-TYPE" 
                    TCGA-DU-5849                     TCGA-DU-5851 
  "DEL PEAK  1(1P36.31) MUTATED" "DEL PEAK  1(1P36.31) WILD-TYPE" 
                    TCGA-DU-5852                     TCGA-DU-5853 
  "DEL PEAK  1(1P36.31) MUTATED" "DEL PEAK  1(1P36.31) WILD-TYPE" 
                    TCGA-DU-5854                     TCGA-DU-5855 
"DEL PEAK  1(1P36.31) WILD-TYPE" "DEL PEAK  1(1P36.31) WILD-TYPE" 
                    TCGA-DU-5870                     TCGA-DU-5871 
  "DEL PEAK  1(1P36.31) MUTATED" "DEL PEAK  1(1P36.31) WILD-TYPE" 
                    TCGA-DU-5872                     TCGA-DU-5874 
  "DEL PEAK  1(1P36.31) MUTATED"   "DEL PEAK  1(1P36.31) MUTATED" 
                    TCGA-DU-6392                     TCGA-DU-6393 
"DEL PEAK  1(1P36.31) WILD-TYPE"   "DEL PEAK  1(1P36.31) MUTATED" 
                    TCGA-DU-6394                     TCGA-DU-6395 
  "DEL PEAK  1(1P36.31) MUTATED" "DEL PEAK  1(1P36.31) WILD-TYPE" 
                    TCGA-DU-6396                     TCGA-DU-6397 
  "DEL PEAK  1(1P36.31) MUTATED"   "DEL PEAK  1(1P36.31) MUTATED" 
                    TCGA-DU-6399                     TCGA-DU-6400 
"DEL PEAK  1(1P36.31) WILD-TYPE"   "DEL PEAK  1(1P36.31) MUTATED" 
                    TCGA-DU-6401                     TCGA-DU-6402 
"DEL PEAK  1(1P36.31) WILD-TYPE"   "DEL PEAK  1(1P36.31) MUTATED" 
                    TCGA-DU-6403                     TCGA-DU-6404 
"DEL PEAK  1(1P36.31) WILD-TYPE" "DEL PEAK  1(1P36.31) WILD-TYPE" 
                    TCGA-DU-6405                     TCGA-DU-6406 
  "DEL PEAK  1(1P36.31) MUTATED" "DEL PEAK  1(1P36.31) WILD-TYPE" 
                    TCGA-DU-6407                     TCGA-DU-6408 
"DEL PEAK  1(1P36.31) WILD-TYPE" "DEL PEAK  1(1P36.31) WILD-TYPE" 
                    TCGA-DU-6410                     TCGA-DU-6542 
  "DEL PEAK  1(1P36.31) MUTATED" "DEL PEAK  1(1P36.31) WILD-TYPE" 
                    TCGA-DU-7006                     TCGA-DU-7007 
  "DEL PEAK  1(1P36.31) MUTATED" "DEL PEAK  1(1P36.31) WILD-TYPE" 
                    TCGA-DU-7008                     TCGA-DU-7009 
"DEL PEAK  1(1P36.31) WILD-TYPE"   "DEL PEAK  1(1P36.31) MUTATED" 
                    TCGA-DU-7010                     TCGA-DU-7011 
"DEL PEAK  1(1P36.31) WILD-TYPE" "DEL PEAK  1(1P36.31) WILD-TYPE" 
                    TCGA-DU-7012                     TCGA-DU-7013 
"DEL PEAK  1(1P36.31) WILD-TYPE" "DEL PEAK  1(1P36.31) WILD-TYPE" 
                    TCGA-DU-7014                     TCGA-DU-7015 
  "DEL PEAK  1(1P36.31) MUTATED" "DEL PEAK  1(1P36.31) WILD-TYPE" 
                    TCGA-DU-7018                     TCGA-DU-7019 
  "DEL PEAK  1(1P36.31) MUTATED" "DEL PEAK  1(1P36.31) WILD-TYPE" 
                    TCGA-DU-7290                     TCGA-DU-7292 
  "DEL PEAK  1(1P36.31) MUTATED" "DEL PEAK  1(1P36.31) WILD-TYPE" 
                    TCGA-DU-7294                     TCGA-DU-7298 
  "DEL PEAK  1(1P36.31) MUTATED" "DEL PEAK  1(1P36.31) WILD-TYPE" 
                    TCGA-DU-7299                     TCGA-DU-7300 
"DEL PEAK  1(1P36.31) WILD-TYPE"   "DEL PEAK  1(1P36.31) MUTATED" 
                    TCGA-DU-7301                     TCGA-DU-7302 
"DEL PEAK  1(1P36.31) WILD-TYPE"   "DEL PEAK  1(1P36.31) MUTATED" 
                    TCGA-DU-7304                     TCGA-DU-7306 
"DEL PEAK  1(1P36.31) WILD-TYPE" "DEL PEAK  1(1P36.31) WILD-TYPE" 
                    TCGA-DU-7309                     TCGA-E1-5302 
"DEL PEAK  1(1P36.31) WILD-TYPE" "DEL PEAK  1(1P36.31) WILD-TYPE" 
                    TCGA-E1-5303                     TCGA-E1-5304 
"DEL PEAK  1(1P36.31) WILD-TYPE" "DEL PEAK  1(1P36.31) WILD-TYPE" 
                    TCGA-E1-5305                     TCGA-E1-5307 
"DEL PEAK  1(1P36.31) WILD-TYPE" "DEL PEAK  1(1P36.31) WILD-TYPE" 
                    TCGA-E1-5311                     TCGA-E1-5318 
  "DEL PEAK  1(1P36.31) MUTATED"   "DEL PEAK  1(1P36.31) MUTATED" 
                    TCGA-E1-5319                     TCGA-E1-5322 
  "DEL PEAK  1(1P36.31) MUTATED" "DEL PEAK  1(1P36.31) WILD-TYPE" 
                    TCGA-EZ-7264                     TCGA-FG-5962 
  "DEL PEAK  1(1P36.31) MUTATED"   "DEL PEAK  1(1P36.31) MUTATED" 
                    TCGA-FG-5963                     TCGA-FG-5964 
"DEL PEAK  1(1P36.31) WILD-TYPE"   "DEL PEAK  1(1P36.31) MUTATED" 
                    TCGA-FG-5965                     TCGA-FG-6688 
"DEL PEAK  1(1P36.31) WILD-TYPE" "DEL PEAK  1(1P36.31) WILD-TYPE" 
                    TCGA-FG-6689                     TCGA-FG-6690 
"DEL PEAK  1(1P36.31) WILD-TYPE" "DEL PEAK  1(1P36.31) WILD-TYPE" 
                    TCGA-FG-6691                     TCGA-FG-6692 
"DEL PEAK  1(1P36.31) WILD-TYPE"   "DEL PEAK  1(1P36.31) MUTATED" 
                    TCGA-FG-7634                     TCGA-FG-7636 
  "DEL PEAK  1(1P36.31) MUTATED" "DEL PEAK  1(1P36.31) WILD-TYPE" 
                    TCGA-FG-7638                     TCGA-FG-7643 
  "DEL PEAK  1(1P36.31) MUTATED" "DEL PEAK  1(1P36.31) WILD-TYPE" 
                    TCGA-FN-7833                     TCGA-HT-7467 
"DEL PEAK  1(1P36.31) WILD-TYPE"   "DEL PEAK  1(1P36.31) MUTATED" 
                    TCGA-HT-7468                     TCGA-HT-7470 
  "DEL PEAK  1(1P36.31) MUTATED" "DEL PEAK  1(1P36.31) WILD-TYPE" 
                    TCGA-HT-7472                     TCGA-HT-7473 
"DEL PEAK  1(1P36.31) WILD-TYPE" "DEL PEAK  1(1P36.31) WILD-TYPE" 
                    TCGA-HT-7474                     TCGA-HT-7475 
"DEL PEAK  1(1P36.31) WILD-TYPE" "DEL PEAK  1(1P36.31) WILD-TYPE" 
                    TCGA-HT-7476                     TCGA-HT-7478 
"DEL PEAK  1(1P36.31) WILD-TYPE" "DEL PEAK  1(1P36.31) WILD-TYPE" 
                    TCGA-HT-7479                     TCGA-HT-7480 
"DEL PEAK  1(1P36.31) WILD-TYPE"   "DEL PEAK  1(1P36.31) MUTATED" 
                    TCGA-HT-7481                     TCGA-HT-7482 
  "DEL PEAK  1(1P36.31) MUTATED" "DEL PEAK  1(1P36.31) WILD-TYPE" 
                    TCGA-HT-7483                     TCGA-HT-7485 
"DEL PEAK  1(1P36.31) WILD-TYPE" "DEL PEAK  1(1P36.31) WILD-TYPE" 
                    TCGA-HT-7601                     TCGA-HT-7602 
"DEL PEAK  1(1P36.31) WILD-TYPE" "DEL PEAK  1(1P36.31) WILD-TYPE" 
                    TCGA-HT-7603                     TCGA-HT-7604 
"DEL PEAK  1(1P36.31) WILD-TYPE" "DEL PEAK  1(1P36.31) WILD-TYPE" 
                    TCGA-HT-7605                     TCGA-HT-7606 
  "DEL PEAK  1(1P36.31) MUTATED" "DEL PEAK  1(1P36.31) WILD-TYPE" 
                    TCGA-HT-7607                     TCGA-HT-7608 
  "DEL PEAK  1(1P36.31) MUTATED"   "DEL PEAK  1(1P36.31) MUTATED" 
                    TCGA-HT-7609                     TCGA-HT-7610 
"DEL PEAK  1(1P36.31) WILD-TYPE" "DEL PEAK  1(1P36.31) WILD-TYPE" 
                    TCGA-HW-7486                     TCGA-HW-7487 
  "DEL PEAK  1(1P36.31) MUTATED"   "DEL PEAK  1(1P36.31) MUTATED" 
                    TCGA-HW-7489                     TCGA-HW-7490 
"DEL PEAK  1(1P36.31) WILD-TYPE" "DEL PEAK  1(1P36.31) WILD-TYPE" 
                    TCGA-HW-7491                     TCGA-HW-7493 
  "DEL PEAK  1(1P36.31) MUTATED" "DEL PEAK  1(1P36.31) WILD-TYPE" 
                    TCGA-HW-7495                     TCGA-IK-7675 
  "DEL PEAK  1(1P36.31) MUTATED" "DEL PEAK  1(1P36.31) WILD-TYPE" 
                    TCGA-IK-8125 
  "DEL PEAK  1(1P36.31) MUTATED" 
                    TCGA-CS-4938                     TCGA-CS-4941 
"DEL PEAK  1(1P36.31) WILD-TYPE" "DEL PEAK  1(1P36.31) WILD-TYPE" 
                    TCGA-CS-4942                     TCGA-CS-4943 
"DEL PEAK  1(1P36.31) WILD-TYPE" "DEL PEAK  1(1P36.31) WILD-TYPE" 
                    TCGA-CS-4944                     TCGA-CS-5390 
"DEL PEAK  1(1P36.31) WILD-TYPE"   "DEL PEAK  1(1P36.31) MUTATED" 
                    TCGA-CS-5393                     TCGA-CS-5394 
"DEL PEAK  1(1P36.31) WILD-TYPE"   "DEL PEAK  1(1P36.31) MUTATED" 
                    TCGA-CS-5395                     TCGA-CS-5396 
"DEL PEAK  1(1P36.31) WILD-TYPE"   "DEL PEAK  1(1P36.31) MUTATED" 
                    TCGA-CS-5397                     TCGA-CS-6186 
"DEL PEAK  1(1P36.31) WILD-TYPE" "DEL PEAK  1(1P36.31) WILD-TYPE" 
                    TCGA-CS-6188                     TCGA-CS-6290 
"DEL PEAK  1(1P36.31) WILD-TYPE" "DEL PEAK  1(1P36.31) WILD-TYPE" 
                    TCGA-CS-6665                     TCGA-CS-6666 
"DEL PEAK  1(1P36.31) WILD-TYPE" "DEL PEAK  1(1P36.31) WILD-TYPE" 
                    TCGA-CS-6667                     TCGA-CS-6668 
"DEL PEAK  1(1P36.31) WILD-TYPE"   "DEL PEAK  1(1P36.31) MUTATED" 
                    TCGA-CS-6669                     TCGA-CS-6670 
"DEL PEAK  1(1P36.31) WILD-TYPE"   "DEL PEAK  1(1P36.31) MUTATED" 
                    TCGA-DB-5270                     TCGA-DB-5273 
"DEL PEAK  1(1P36.31) WILD-TYPE" "DEL PEAK  1(1P36.31) WILD-TYPE" 
                    TCGA-DB-5274                     TCGA-DB-5275 
  "DEL PEAK  1(1P36.31) MUTATED"   "DEL PEAK  1(1P36.31) MUTATED" 
                    TCGA-DB-5276                     TCGA-DB-5277 
"DEL PEAK  1(1P36.31) WILD-TYPE" "DEL PEAK  1(1P36.31) WILD-TYPE" 
                    TCGA-DB-5278                     TCGA-DB-5279 
  "DEL PEAK  1(1P36.31) MUTATED"   "DEL PEAK  1(1P36.31) MUTATED" 
                    TCGA-DB-5280                     TCGA-DB-5281 
"DEL PEAK  1(1P36.31) WILD-TYPE" "DEL PEAK  1(1P36.31) WILD-TYPE" 
                    TCGA-DH-5140                     TCGA-DH-5141 
"DEL PEAK  1(1P36.31) WILD-TYPE"   "DEL PEAK  1(1P36.31) MUTATED" 
                    TCGA-DH-5142                     TCGA-DH-5143 
"DEL PEAK  1(1P36.31) WILD-TYPE" "DEL PEAK  1(1P36.31) WILD-TYPE" 
                    TCGA-DH-5144                     TCGA-DU-5847 
  "DEL PEAK  1(1P36.31) MUTATED" "DEL PEAK  1(1P36.31) WILD-TYPE" 
                    TCGA-DU-5849                     TCGA-DU-5851 
  "DEL PEAK  1(1P36.31) MUTATED" "DEL PEAK  1(1P36.31) WILD-TYPE" 
                    TCGA-DU-5852                     TCGA-DU-5853 
  "DEL PEAK  1(1P36.31) MUTATED" "DEL PEAK  1(1P36.31) WILD-TYPE" 
                    TCGA-DU-5854                     TCGA-DU-5855 
"DEL PEAK  1(1P36.31) WILD-TYPE" "DEL PEAK  1(1P36.31) WILD-TYPE" 
                    TCGA-DU-5870                     TCGA-DU-5871 
  "DEL PEAK  1(1P36.31) MUTATED" "DEL PEAK  1(1P36.31) WILD-TYPE" 
                    TCGA-DU-5872                     TCGA-DU-5874 
  "DEL PEAK  1(1P36.31) MUTATED"   "DEL PEAK  1(1P36.31) MUTATED" 
                    TCGA-DU-6392                     TCGA-DU-6393 
"DEL PEAK  1(1P36.31) WILD-TYPE"   "DEL PEAK  1(1P36.31) MUTATED" 
                    TCGA-DU-6394                     TCGA-DU-6395 
  "DEL PEAK  1(1P36.31) MUTATED" "DEL PEAK  1(1P36.31) WILD-TYPE" 
                    TCGA-DU-6396                     TCGA-DU-6397 
  "DEL PEAK  1(1P36.31) MUTATED"   "DEL PEAK  1(1P36.31) MUTATED" 
                    TCGA-DU-6399                     TCGA-DU-6400 
"DEL PEAK  1(1P36.31) WILD-TYPE"   "DEL PEAK  1(1P36.31) MUTATED" 
                    TCGA-DU-6401                     TCGA-DU-6402 
"DEL PEAK  1(1P36.31) WILD-TYPE"   "DEL PEAK  1(1P36.31) MUTATED" 
                    TCGA-DU-6403                     TCGA-DU-6404 
"DEL PEAK  1(1P36.31) WILD-TYPE" "DEL PEAK  1(1P36.31) WILD-TYPE" 
                    TCGA-DU-6405                     TCGA-DU-6406 
  "DEL PEAK  1(1P36.31) MUTATED" "DEL PEAK  1(1P36.31) WILD-TYPE" 
                    TCGA-DU-6407                     TCGA-DU-6408 
"DEL PEAK  1(1P36.31) WILD-TYPE" "DEL PEAK  1(1P36.31) WILD-TYPE" 
                    TCGA-DU-6410                     TCGA-DU-6542 
  "DEL PEAK  1(1P36.31) MUTATED" "DEL PEAK  1(1P36.31) WILD-TYPE" 
                    TCGA-DU-7006                     TCGA-DU-7007 
  "DEL PEAK  1(1P36.31) MUTATED" "DEL PEAK  1(1P36.31) WILD-TYPE" 
                    TCGA-DU-7008                     TCGA-DU-7009 
"DEL PEAK  1(1P36.31) WILD-TYPE"   "DEL PEAK  1(1P36.31) MUTATED" 
                    TCGA-DU-7010                     TCGA-DU-7011 
"DEL PEAK  1(1P36.31) WILD-TYPE" "DEL PEAK  1(1P36.31) WILD-TYPE" 
                    TCGA-DU-7012                     TCGA-DU-7013 
"DEL PEAK  1(1P36.31) WILD-TYPE" "DEL PEAK  1(1P36.31) WILD-TYPE" 
                    TCGA-DU-7014                     TCGA-DU-7015 
  "DEL PEAK  1(1P36.31) MUTATED" "DEL PEAK  1(1P36.31) WILD-TYPE" 
                    TCGA-DU-7018                     TCGA-DU-7019 
  "DEL PEAK  1(1P36.31) MUTATED" "DEL PEAK  1(1P36.31) WILD-TYPE" 
                    TCGA-DU-7290                     TCGA-DU-7292 
  "DEL PEAK  1(1P36.31) MUTATED" "DEL PEAK  1(1P36.31) WILD-TYPE" 
                    TCGA-DU-7294                     TCGA-DU-7298 
  "DEL PEAK  1(1P36.31) MUTATED" "DEL PEAK  1(1P36.31) WILD-TYPE" 
                    TCGA-DU-7299                     TCGA-DU-7300 
"DEL PEAK  1(1P36.31) WILD-TYPE"   "DEL PEAK  1(1P36.31) MUTATED" 
                    TCGA-DU-7301                     TCGA-DU-7302 
"DEL PEAK  1(1P36.31) WILD-TYPE"   "DEL PEAK  1(1P36.31) MUTATED" 
                    TCGA-DU-7304                     TCGA-DU-7306 
"DEL PEAK  1(1P36.31) WILD-TYPE" "DEL PEAK  1(1P36.31) WILD-TYPE" 
                    TCGA-DU-7309                     TCGA-E1-5302 
"DEL PEAK  1(1P36.31) WILD-TYPE" "DEL PEAK  1(1P36.31) WILD-TYPE" 
                    TCGA-E1-5303                     TCGA-E1-5304 
"DEL PEAK  1(1P36.31) WILD-TYPE" "DEL PEAK  1(1P36.31) WILD-TYPE" 
                    TCGA-E1-5305                     TCGA-E1-5307 
"DEL PEAK  1(1P36.31) WILD-TYPE" "DEL PEAK  1(1P36.31) WILD-TYPE" 
                    TCGA-E1-5311                     TCGA-E1-5318 
  "DEL PEAK  1(1P36.31) MUTATED"   "DEL PEAK  1(1P36.31) MUTATED" 
                    TCGA-E1-5319                     TCGA-E1-5322 
  "DEL PEAK  1(1P36.31) MUTATED" "DEL PEAK  1(1P36.31) WILD-TYPE" 
                    TCGA-EZ-7264                     TCGA-FG-5962 
  "DEL PEAK  1(1P36.31) MUTATED"   "DEL PEAK  1(1P36.31) MUTATED" 
                    TCGA-FG-5963                     TCGA-FG-5964 
"DEL PEAK  1(1P36.31) WILD-TYPE"   "DEL PEAK  1(1P36.31) MUTATED" 
                    TCGA-FG-5965                     TCGA-FG-6688 
"DEL PEAK  1(1P36.31) WILD-TYPE" "DEL PEAK  1(1P36.31) WILD-TYPE" 
                    TCGA-FG-6689                     TCGA-FG-6690 
"DEL PEAK  1(1P36.31) WILD-TYPE" "DEL PEAK  1(1P36.31) WILD-TYPE" 
                    TCGA-FG-6691                     TCGA-FG-6692 
"DEL PEAK  1(1P36.31) WILD-TYPE"   "DEL PEAK  1(1P36.31) MUTATED" 
                    TCGA-FG-7634                     TCGA-FG-7636 
  "DEL PEAK  1(1P36.31) MUTATED" "DEL PEAK  1(1P36.31) WILD-TYPE" 
                    TCGA-FG-7638                     TCGA-FG-7643 
  "DEL PEAK  1(1P36.31) MUTATED" "DEL PEAK  1(1P36.31) WILD-TYPE" 
                    TCGA-FN-7833                     TCGA-HT-7467 
"DEL PEAK  1(1P36.31) WILD-TYPE"   "DEL PEAK  1(1P36.31) MUTATED" 
                    TCGA-HT-7468                     TCGA-HT-7470 
  "DEL PEAK  1(1P36.31) MUTATED" "DEL PEAK  1(1P36.31) WILD-TYPE" 
                    TCGA-HT-7472                     TCGA-HT-7473 
"DEL PEAK  1(1P36.31) WILD-TYPE" "DEL PEAK  1(1P36.31) WILD-TYPE" 
                    TCGA-HT-7474                     TCGA-HT-7475 
"DEL PEAK  1(1P36.31) WILD-TYPE" "DEL PEAK  1(1P36.31) WILD-TYPE" 
                    TCGA-HT-7476                     TCGA-HT-7478 
"DEL PEAK  1(1P36.31) WILD-TYPE" "DEL PEAK  1(1P36.31) WILD-TYPE" 
                    TCGA-HT-7479                     TCGA-HT-7480 
"DEL PEAK  1(1P36.31) WILD-TYPE"   "DEL PEAK  1(1P36.31) MUTATED" 
                    TCGA-HT-7481                     TCGA-HT-7482 
  "DEL PEAK  1(1P36.31) MUTATED" "DEL PEAK  1(1P36.31) WILD-TYPE" 
                    TCGA-HT-7483                     TCGA-HT-7485 
"DEL PEAK  1(1P36.31) WILD-TYPE" "DEL PEAK  1(1P36.31) WILD-TYPE" 
                    TCGA-HT-7601                     TCGA-HT-7602 
"DEL PEAK  1(1P36.31) WILD-TYPE" "DEL PEAK  1(1P36.31) WILD-TYPE" 
                    TCGA-HT-7603                     TCGA-HT-7604 
"DEL PEAK  1(1P36.31) WILD-TYPE" "DEL PEAK  1(1P36.31) WILD-TYPE" 
                    TCGA-HT-7605                     TCGA-HT-7606 
  "DEL PEAK  1(1P36.31) MUTATED" "DEL PEAK  1(1P36.31) WILD-TYPE" 
                    TCGA-HT-7607                     TCGA-HT-7608 
  "DEL PEAK  1(1P36.31) MUTATED"   "DEL PEAK  1(1P36.31) MUTATED" 
                    TCGA-HT-7609                     TCGA-HT-7610 
"DEL PEAK  1(1P36.31) WILD-TYPE" "DEL PEAK  1(1P36.31) WILD-TYPE" 
                    TCGA-HW-7486                     TCGA-HW-7487 
  "DEL PEAK  1(1P36.31) MUTATED"   "DEL PEAK  1(1P36.31) MUTATED" 
                    TCGA-HW-7489                     TCGA-HW-7490 
"DEL PEAK  1(1P36.31) WILD-TYPE" "DEL PEAK  1(1P36.31) WILD-TYPE" 
                    TCGA-HW-7491                     TCGA-HW-7493 
  "DEL PEAK  1(1P36.31) MUTATED" "DEL PEAK  1(1P36.31) WILD-TYPE" 
                    TCGA-HW-7495                     TCGA-IK-7675 
  "DEL PEAK  1(1P36.31) MUTATED" "DEL PEAK  1(1P36.31) WILD-TYPE" 
                    TCGA-IK-8125 
  "DEL PEAK  1(1P36.31) MUTATED" 
                    TCGA-CS-4938                     TCGA-CS-4941 
"DEL PEAK  1(1P36.31) WILD-TYPE" "DEL PEAK  1(1P36.31) WILD-TYPE" 
                    TCGA-CS-4942                     TCGA-CS-4943 
"DEL PEAK  1(1P36.31) WILD-TYPE" "DEL PEAK  1(1P36.31) WILD-TYPE" 
                    TCGA-CS-4944                     TCGA-CS-5390 
"DEL PEAK  1(1P36.31) WILD-TYPE"   "DEL PEAK  1(1P36.31) MUTATED" 
                    TCGA-CS-5393                     TCGA-CS-5394 
"DEL PEAK  1(1P36.31) WILD-TYPE"   "DEL PEAK  1(1P36.31) MUTATED" 
                    TCGA-CS-5395                     TCGA-CS-5396 
"DEL PEAK  1(1P36.31) WILD-TYPE"   "DEL PEAK  1(1P36.31) MUTATED" 
                    TCGA-CS-5397                     TCGA-CS-6186 
"DEL PEAK  1(1P36.31) WILD-TYPE" "DEL PEAK  1(1P36.31) WILD-TYPE" 
                    TCGA-CS-6188                     TCGA-CS-6290 
"DEL PEAK  1(1P36.31) WILD-TYPE" "DEL PEAK  1(1P36.31) WILD-TYPE" 
                    TCGA-CS-6665                     TCGA-CS-6666 
"DEL PEAK  1(1P36.31) WILD-TYPE" "DEL PEAK  1(1P36.31) WILD-TYPE" 
                    TCGA-CS-6667                     TCGA-CS-6668 
"DEL PEAK  1(1P36.31) WILD-TYPE"   "DEL PEAK  1(1P36.31) MUTATED" 
                    TCGA-CS-6669                     TCGA-CS-6670 
"DEL PEAK  1(1P36.31) WILD-TYPE"   "DEL PEAK  1(1P36.31) MUTATED" 
                    TCGA-DB-5270                     TCGA-DB-5273 
"DEL PEAK  1(1P36.31) WILD-TYPE" "DEL PEAK  1(1P36.31) WILD-TYPE" 
                    TCGA-DB-5274                     TCGA-DB-5275 
  "DEL PEAK  1(1P36.31) MUTATED"   "DEL PEAK  1(1P36.31) MUTATED" 
                    TCGA-DB-5276                     TCGA-DB-5277 
"DEL PEAK  1(1P36.31) WILD-TYPE" "DEL PEAK  1(1P36.31) WILD-TYPE" 
                    TCGA-DB-5278                     TCGA-DB-5279 
  "DEL PEAK  1(1P36.31) MUTATED"   "DEL PEAK  1(1P36.31) MUTATED" 
                    TCGA-DB-5280                     TCGA-DB-5281 
"DEL PEAK  1(1P36.31) WILD-TYPE" "DEL PEAK  1(1P36.31) WILD-TYPE" 
                    TCGA-DH-5140                     TCGA-DH-5141 
"DEL PEAK  1(1P36.31) WILD-TYPE"   "DEL PEAK  1(1P36.31) MUTATED" 
                    TCGA-DH-5142                     TCGA-DH-5143 
"DEL PEAK  1(1P36.31) WILD-TYPE" "DEL PEAK  1(1P36.31) WILD-TYPE" 
                    TCGA-DH-5144                     TCGA-DU-5847 
  "DEL PEAK  1(1P36.31) MUTATED" "DEL PEAK  1(1P36.31) WILD-TYPE" 
                    TCGA-DU-5849                     TCGA-DU-5851 
  "DEL PEAK  1(1P36.31) MUTATED" "DEL PEAK  1(1P36.31) WILD-TYPE" 
                    TCGA-DU-5852                     TCGA-DU-5853 
  "DEL PEAK  1(1P36.31) MUTATED" "DEL PEAK  1(1P36.31) WILD-TYPE" 
                    TCGA-DU-5854                     TCGA-DU-5855 
"DEL PEAK  1(1P36.31) WILD-TYPE" "DEL PEAK  1(1P36.31) WILD-TYPE" 
                    TCGA-DU-5870                     TCGA-DU-5871 
  "DEL PEAK  1(1P36.31) MUTATED" "DEL PEAK  1(1P36.31) WILD-TYPE" 
                    TCGA-DU-5872                     TCGA-DU-5874 
  "DEL PEAK  1(1P36.31) MUTATED"   "DEL PEAK  1(1P36.31) MUTATED" 
                    TCGA-DU-6392                     TCGA-DU-6393 
"DEL PEAK  1(1P36.31) WILD-TYPE"   "DEL PEAK  1(1P36.31) MUTATED" 
                    TCGA-DU-6394                     TCGA-DU-6395 
  "DEL PEAK  1(1P36.31) MUTATED" "DEL PEAK  1(1P36.31) WILD-TYPE" 
                    TCGA-DU-6396                     TCGA-DU-6397 
  "DEL PEAK  1(1P36.31) MUTATED"   "DEL PEAK  1(1P36.31) MUTATED" 
                    TCGA-DU-6399                     TCGA-DU-6400 
"DEL PEAK  1(1P36.31) WILD-TYPE"   "DEL PEAK  1(1P36.31) MUTATED" 
                    TCGA-DU-6401                     TCGA-DU-6402 
"DEL PEAK  1(1P36.31) WILD-TYPE"   "DEL PEAK  1(1P36.31) MUTATED" 
                    TCGA-DU-6403                     TCGA-DU-6404 
"DEL PEAK  1(1P36.31) WILD-TYPE" "DEL PEAK  1(1P36.31) WILD-TYPE" 
                    TCGA-DU-6405                     TCGA-DU-6406 
  "DEL PEAK  1(1P36.31) MUTATED" "DEL PEAK  1(1P36.31) WILD-TYPE" 
                    TCGA-DU-6407                     TCGA-DU-6408 
"DEL PEAK  1(1P36.31) WILD-TYPE" "DEL PEAK  1(1P36.31) WILD-TYPE" 
                    TCGA-DU-6410                     TCGA-DU-6542 
  "DEL PEAK  1(1P36.31) MUTATED" "DEL PEAK  1(1P36.31) WILD-TYPE" 
                    TCGA-DU-7006                     TCGA-DU-7007 
  "DEL PEAK  1(1P36.31) MUTATED" "DEL PEAK  1(1P36.31) WILD-TYPE" 
                    TCGA-DU-7008                     TCGA-DU-7009 
"DEL PEAK  1(1P36.31) WILD-TYPE"   "DEL PEAK  1(1P36.31) MUTATED" 
                    TCGA-DU-7010                     TCGA-DU-7011 
"DEL PEAK  1(1P36.31) WILD-TYPE" "DEL PEAK  1(1P36.31) WILD-TYPE" 
                    TCGA-DU-7012                     TCGA-DU-7013 
"DEL PEAK  1(1P36.31) WILD-TYPE" "DEL PEAK  1(1P36.31) WILD-TYPE" 
                    TCGA-DU-7014                     TCGA-DU-7015 
  "DEL PEAK  1(1P36.31) MUTATED" "DEL PEAK  1(1P36.31) WILD-TYPE" 
                    TCGA-DU-7018                     TCGA-DU-7019 
  "DEL PEAK  1(1P36.31) MUTATED" "DEL PEAK  1(1P36.31) WILD-TYPE" 
                    TCGA-DU-7290                     TCGA-DU-7292 
  "DEL PEAK  1(1P36.31) MUTATED" "DEL PEAK  1(1P36.31) WILD-TYPE" 
                    TCGA-DU-7294                     TCGA-DU-7298 
  "DEL PEAK  1(1P36.31) MUTATED" "DEL PEAK  1(1P36.31) WILD-TYPE" 
                    TCGA-DU-7299                     TCGA-DU-7300 
"DEL PEAK  1(1P36.31) WILD-TYPE"   "DEL PEAK  1(1P36.31) MUTATED" 
                    TCGA-DU-7301                     TCGA-DU-7302 
"DEL PEAK  1(1P36.31) WILD-TYPE"   "DEL PEAK  1(1P36.31) MUTATED" 
                    TCGA-DU-7304                     TCGA-DU-7306 
"DEL PEAK  1(1P36.31) WILD-TYPE" "DEL PEAK  1(1P36.31) WILD-TYPE" 
                    TCGA-DU-7309                     TCGA-E1-5302 
"DEL PEAK  1(1P36.31) WILD-TYPE" "DEL PEAK  1(1P36.31) WILD-TYPE" 
                    TCGA-E1-5303                     TCGA-E1-5304 
"DEL PEAK  1(1P36.31) WILD-TYPE" "DEL PEAK  1(1P36.31) WILD-TYPE" 
                    TCGA-E1-5305                     TCGA-E1-5307 
"DEL PEAK  1(1P36.31) WILD-TYPE" "DEL PEAK  1(1P36.31) WILD-TYPE" 
                    TCGA-E1-5311                     TCGA-E1-5318 
  "DEL PEAK  1(1P36.31) MUTATED"   "DEL PEAK  1(1P36.31) MUTATED" 
                    TCGA-E1-5319                     TCGA-E1-5322 
  "DEL PEAK  1(1P36.31) MUTATED" "DEL PEAK  1(1P36.31) WILD-TYPE" 
                    TCGA-EZ-7264                     TCGA-FG-5962 
  "DEL PEAK  1(1P36.31) MUTATED"   "DEL PEAK  1(1P36.31) MUTATED" 
                    TCGA-FG-5963                     TCGA-FG-5964 
"DEL PEAK  1(1P36.31) WILD-TYPE"   "DEL PEAK  1(1P36.31) MUTATED" 
                    TCGA-FG-5965                     TCGA-FG-6688 
"DEL PEAK  1(1P36.31) WILD-TYPE" "DEL PEAK  1(1P36.31) WILD-TYPE" 
                    TCGA-FG-6689                     TCGA-FG-6690 
"DEL PEAK  1(1P36.31) WILD-TYPE" "DEL PEAK  1(1P36.31) WILD-TYPE" 
                    TCGA-FG-6691                     TCGA-FG-6692 
"DEL PEAK  1(1P36.31) WILD-TYPE"   "DEL PEAK  1(1P36.31) MUTATED" 
                    TCGA-FG-7634                     TCGA-FG-7636 
  "DEL PEAK  1(1P36.31) MUTATED" "DEL PEAK  1(1P36.31) WILD-TYPE" 
                    TCGA-FG-7638                     TCGA-FG-7643 
  "DEL PEAK  1(1P36.31) MUTATED" "DEL PEAK  1(1P36.31) WILD-TYPE" 
                    TCGA-FN-7833                     TCGA-HT-7467 
"DEL PEAK  1(1P36.31) WILD-TYPE"   "DEL PEAK  1(1P36.31) MUTATED" 
                    TCGA-HT-7468                     TCGA-HT-7470 
  "DEL PEAK  1(1P36.31) MUTATED" "DEL PEAK  1(1P36.31) WILD-TYPE" 
                    TCGA-HT-7472                     TCGA-HT-7473 
"DEL PEAK  1(1P36.31) WILD-TYPE" "DEL PEAK  1(1P36.31) WILD-TYPE" 
                    TCGA-HT-7474                     TCGA-HT-7475 
"DEL PEAK  1(1P36.31) WILD-TYPE" "DEL PEAK  1(1P36.31) WILD-TYPE" 
                    TCGA-HT-7476                     TCGA-HT-7478 
"DEL PEAK  1(1P36.31) WILD-TYPE" "DEL PEAK  1(1P36.31) WILD-TYPE" 
                    TCGA-HT-7479                     TCGA-HT-7480 
"DEL PEAK  1(1P36.31) WILD-TYPE"   "DEL PEAK  1(1P36.31) MUTATED" 
                    TCGA-HT-7481                     TCGA-HT-7482 
  "DEL PEAK  1(1P36.31) MUTATED" "DEL PEAK  1(1P36.31) WILD-TYPE" 
                    TCGA-HT-7483                     TCGA-HT-7485 
"DEL PEAK  1(1P36.31) WILD-TYPE" "DEL PEAK  1(1P36.31) WILD-TYPE" 
                    TCGA-HT-7601                     TCGA-HT-7602 
"DEL PEAK  1(1P36.31) WILD-TYPE" "DEL PEAK  1(1P36.31) WILD-TYPE" 
                    TCGA-HT-7603                     TCGA-HT-7604 
"DEL PEAK  1(1P36.31) WILD-TYPE" "DEL PEAK  1(1P36.31) WILD-TYPE" 
                    TCGA-HT-7605                     TCGA-HT-7606 
  "DEL PEAK  1(1P36.31) MUTATED" "DEL PEAK  1(1P36.31) WILD-TYPE" 
                    TCGA-HT-7607                     TCGA-HT-7608 
  "DEL PEAK  1(1P36.31) MUTATED"   "DEL PEAK  1(1P36.31) MUTATED" 
                    TCGA-HT-7609                     TCGA-HT-7610 
"DEL PEAK  1(1P36.31) WILD-TYPE" "DEL PEAK  1(1P36.31) WILD-TYPE" 
                    TCGA-HW-7486                     TCGA-HW-7487 
  "DEL PEAK  1(1P36.31) MUTATED"   "DEL PEAK  1(1P36.31) MUTATED" 
                    TCGA-HW-7489                     TCGA-HW-7490 
"DEL PEAK  1(1P36.31) WILD-TYPE" "DEL PEAK  1(1P36.31) WILD-TYPE" 
                    TCGA-HW-7491                     TCGA-HW-7493 
  "DEL PEAK  1(1P36.31) MUTATED" "DEL PEAK  1(1P36.31) WILD-TYPE" 
                    TCGA-HW-7495                     TCGA-IK-7675 
  "DEL PEAK  1(1P36.31) MUTATED" "DEL PEAK  1(1P36.31) WILD-TYPE" 
                    TCGA-IK-8125 
  "DEL PEAK  1(1P36.31) MUTATED" 
[1] "hr=" "1.1"
D15V2, continuous
D15V3, binary
[1] "tbl2"
                                cls
clus                             [,1] [,2]
  DEL PEAK  1(1P36.31) MUTATED     25   28
  DEL PEAK  1(1P36.31) WILD-TYPE   37   55
        clus
vv       DEL PEAK  1(1P36.31) MUTATED DEL PEAK  1(1P36.31) WILD-TYPE
  FEMALE                           25                             37
  MALE                             28                             55
D15V4, continuous
D15V5, multiclass
                   clus
vv                  DEL PEAK  1(1P36.31) MUTATED DEL PEAK  1(1P36.31) WILD-TYPE
  ASTROCYTOMA                                  6                             44
  OLIGOASTROCYTOMA                             7                             29
  OLIGODENDROGLIOMA                           40                             18
D15V6, binary
[1] "tbl2"
                                cls
clus                             [,1] [,2]
  DEL PEAK  1(1P36.31) MUTATED     32   21
  DEL PEAK  1(1P36.31) WILD-TYPE   27   65
     clus
vv    DEL PEAK  1(1P36.31) MUTATED DEL PEAK  1(1P36.31) WILD-TYPE
  NO                            21                             65
  YES                           32                             27
D15V7, binary
[1] "tbl2"
                                cls
clus                             [,1] [,2]
  DEL PEAK  1(1P36.31) MUTATED     29   24
  DEL PEAK  1(1P36.31) WILD-TYPE   45   47
     clus
vv    DEL PEAK  1(1P36.31) MUTATED DEL PEAK  1(1P36.31) WILD-TYPE
  NO                            24                             47
  YES                           29                             45

Clustering(16) Variable = Del Peak  2(1q44) mutation analysis
D16V1, survival
                 TCGA-CS-4938                  TCGA-CS-4941 
"DEL PEAK  2(1Q44) WILD-TYPE" "DEL PEAK  2(1Q44) WILD-TYPE" 
                 TCGA-CS-4942                  TCGA-CS-4943 
"DEL PEAK  2(1Q44) WILD-TYPE"   "DEL PEAK  2(1Q44) MUTATED" 
                 TCGA-CS-4944                  TCGA-CS-5390 
"DEL PEAK  2(1Q44) WILD-TYPE" "DEL PEAK  2(1Q44) WILD-TYPE" 
                 TCGA-CS-5393                  TCGA-CS-5394 
"DEL PEAK  2(1Q44) WILD-TYPE" "DEL PEAK  2(1Q44) WILD-TYPE" 
                 TCGA-CS-5395                  TCGA-CS-5396 
"DEL PEAK  2(1Q44) WILD-TYPE" "DEL PEAK  2(1Q44) WILD-TYPE" 
                 TCGA-CS-5397                  TCGA-CS-6186 
"DEL PEAK  2(1Q44) WILD-TYPE" "DEL PEAK  2(1Q44) WILD-TYPE" 
                 TCGA-CS-6188                  TCGA-CS-6290 
"DEL PEAK  2(1Q44) WILD-TYPE" "DEL PEAK  2(1Q44) WILD-TYPE" 
                 TCGA-CS-6665                  TCGA-CS-6666 
"DEL PEAK  2(1Q44) WILD-TYPE" "DEL PEAK  2(1Q44) WILD-TYPE" 
                 TCGA-CS-6667                  TCGA-CS-6668 
"DEL PEAK  2(1Q44) WILD-TYPE" "DEL PEAK  2(1Q44) WILD-TYPE" 
                 TCGA-CS-6669                  TCGA-CS-6670 
"DEL PEAK  2(1Q44) WILD-TYPE" "DEL PEAK  2(1Q44) WILD-TYPE" 
                 TCGA-DB-5270                  TCGA-DB-5273 
"DEL PEAK  2(1Q44) WILD-TYPE" "DEL PEAK  2(1Q44) WILD-TYPE" 
                 TCGA-DB-5274                  TCGA-DB-5275 
"DEL PEAK  2(1Q44) WILD-TYPE" "DEL PEAK  2(1Q44) WILD-TYPE" 
                 TCGA-DB-5276                  TCGA-DB-5277 
"DEL PEAK  2(1Q44) WILD-TYPE" "DEL PEAK  2(1Q44) WILD-TYPE" 
                 TCGA-DB-5278                  TCGA-DB-5279 
"DEL PEAK  2(1Q44) WILD-TYPE" "DEL PEAK  2(1Q44) WILD-TYPE" 
                 TCGA-DB-5280                  TCGA-DB-5281 
"DEL PEAK  2(1Q44) WILD-TYPE" "DEL PEAK  2(1Q44) WILD-TYPE" 
                 TCGA-DH-5140                  TCGA-DH-5141 
"DEL PEAK  2(1Q44) WILD-TYPE" "DEL PEAK  2(1Q44) WILD-TYPE" 
                 TCGA-DH-5142                  TCGA-DH-5143 
"DEL PEAK  2(1Q44) WILD-TYPE" "DEL PEAK  2(1Q44) WILD-TYPE" 
                 TCGA-DH-5144                  TCGA-DU-5847 
"DEL PEAK  2(1Q44) WILD-TYPE" "DEL PEAK  2(1Q44) WILD-TYPE" 
                 TCGA-DU-5849                  TCGA-DU-5851 
"DEL PEAK  2(1Q44) WILD-TYPE" "DEL PEAK  2(1Q44) WILD-TYPE" 
                 TCGA-DU-5852                  TCGA-DU-5853 
"DEL PEAK  2(1Q44) WILD-TYPE" "DEL PEAK  2(1Q44) WILD-TYPE" 
                 TCGA-DU-5854                  TCGA-DU-5855 
"DEL PEAK  2(1Q44) WILD-TYPE" "DEL PEAK  2(1Q44) WILD-TYPE" 
                 TCGA-DU-5870                  TCGA-DU-5871 
"DEL PEAK  2(1Q44) WILD-TYPE"   "DEL PEAK  2(1Q44) MUTATED" 
                 TCGA-DU-5872                  TCGA-DU-5874 
"DEL PEAK  2(1Q44) WILD-TYPE" "DEL PEAK  2(1Q44) WILD-TYPE" 
                 TCGA-DU-6392                  TCGA-DU-6393 
"DEL PEAK  2(1Q44) WILD-TYPE" "DEL PEAK  2(1Q44) WILD-TYPE" 
                 TCGA-DU-6394                  TCGA-DU-6395 
"DEL PEAK  2(1Q44) WILD-TYPE" "DEL PEAK  2(1Q44) WILD-TYPE" 
                 TCGA-DU-6396                  TCGA-DU-6397 
  "DEL PEAK  2(1Q44) MUTATED" "DEL PEAK  2(1Q44) WILD-TYPE" 
                 TCGA-DU-6399                  TCGA-DU-6400 
"DEL PEAK  2(1Q44) WILD-TYPE" "DEL PEAK  2(1Q44) WILD-TYPE" 
                 TCGA-DU-6401                  TCGA-DU-6402 
"DEL PEAK  2(1Q44) WILD-TYPE" "DEL PEAK  2(1Q44) WILD-TYPE" 
                 TCGA-DU-6403                  TCGA-DU-6404 
"DEL PEAK  2(1Q44) WILD-TYPE" "DEL PEAK  2(1Q44) WILD-TYPE" 
                 TCGA-DU-6405                  TCGA-DU-6406 
"DEL PEAK  2(1Q44) WILD-TYPE" "DEL PEAK  2(1Q44) WILD-TYPE" 
                 TCGA-DU-6407                  TCGA-DU-6408 
"DEL PEAK  2(1Q44) WILD-TYPE" "DEL PEAK  2(1Q44) WILD-TYPE" 
                 TCGA-DU-6410                  TCGA-DU-6542 
"DEL PEAK  2(1Q44) WILD-TYPE"   "DEL PEAK  2(1Q44) MUTATED" 
                 TCGA-DU-7006                  TCGA-DU-7007 
"DEL PEAK  2(1Q44) WILD-TYPE" "DEL PEAK  2(1Q44) WILD-TYPE" 
                 TCGA-DU-7008                  TCGA-DU-7009 
"DEL PEAK  2(1Q44) WILD-TYPE" "DEL PEAK  2(1Q44) WILD-TYPE" 
                 TCGA-DU-7010                  TCGA-DU-7011 
"DEL PEAK  2(1Q44) WILD-TYPE" "DEL PEAK  2(1Q44) WILD-TYPE" 
                 TCGA-DU-7012                  TCGA-DU-7013 
"DEL PEAK  2(1Q44) WILD-TYPE" "DEL PEAK  2(1Q44) WILD-TYPE" 
                 TCGA-DU-7014                  TCGA-DU-7015 
"DEL PEAK  2(1Q44) WILD-TYPE"   "DEL PEAK  2(1Q44) MUTATED" 
                 TCGA-DU-7018                  TCGA-DU-7019 
"DEL PEAK  2(1Q44) WILD-TYPE" "DEL PEAK  2(1Q44) WILD-TYPE" 
                 TCGA-DU-7290                  TCGA-DU-7292 
"DEL PEAK  2(1Q44) WILD-TYPE" "DEL PEAK  2(1Q44) WILD-TYPE" 
                 TCGA-DU-7294                  TCGA-DU-7298 
"DEL PEAK  2(1Q44) WILD-TYPE" "DEL PEAK  2(1Q44) WILD-TYPE" 
                 TCGA-DU-7299                  TCGA-DU-7300 
"DEL PEAK  2(1Q44) WILD-TYPE" "DEL PEAK  2(1Q44) WILD-TYPE" 
                 TCGA-DU-7301                  TCGA-DU-7302 
"DEL PEAK  2(1Q44) WILD-TYPE" "DEL PEAK  2(1Q44) WILD-TYPE" 
                 TCGA-DU-7304                  TCGA-DU-7306 
"DEL PEAK  2(1Q44) WILD-TYPE" "DEL PEAK  2(1Q44) WILD-TYPE" 
                 TCGA-DU-7309                  TCGA-E1-5302 
"DEL PEAK  2(1Q44) WILD-TYPE"   "DEL PEAK  2(1Q44) MUTATED" 
                 TCGA-E1-5303                  TCGA-E1-5304 
"DEL PEAK  2(1Q44) WILD-TYPE" "DEL PEAK  2(1Q44) WILD-TYPE" 
                 TCGA-E1-5305                  TCGA-E1-5307 
"DEL PEAK  2(1Q44) WILD-TYPE" "DEL PEAK  2(1Q44) WILD-TYPE" 
                 TCGA-E1-5311                  TCGA-E1-5318 
"DEL PEAK  2(1Q44) WILD-TYPE" "DEL PEAK  2(1Q44) WILD-TYPE" 
                 TCGA-E1-5319                  TCGA-E1-5322 
"DEL PEAK  2(1Q44) WILD-TYPE"   "DEL PEAK  2(1Q44) MUTATED" 
                 TCGA-EZ-7264                  TCGA-FG-5962 
"DEL PEAK  2(1Q44) WILD-TYPE" "DEL PEAK  2(1Q44) WILD-TYPE" 
                 TCGA-FG-5963                  TCGA-FG-5964 
"DEL PEAK  2(1Q44) WILD-TYPE" "DEL PEAK  2(1Q44) WILD-TYPE" 
                 TCGA-FG-5965                  TCGA-FG-6688 
"DEL PEAK  2(1Q44) WILD-TYPE" "DEL PEAK  2(1Q44) WILD-TYPE" 
                 TCGA-FG-6689                  TCGA-FG-6690 
"DEL PEAK  2(1Q44) WILD-TYPE" "DEL PEAK  2(1Q44) WILD-TYPE" 
                 TCGA-FG-6691                  TCGA-FG-6692 
"DEL PEAK  2(1Q44) WILD-TYPE" "DEL PEAK  2(1Q44) WILD-TYPE" 
                 TCGA-FG-7634                  TCGA-FG-7636 
"DEL PEAK  2(1Q44) WILD-TYPE"   "DEL PEAK  2(1Q44) MUTATED" 
                 TCGA-FG-7638                  TCGA-FG-7643 
"DEL PEAK  2(1Q44) WILD-TYPE" "DEL PEAK  2(1Q44) WILD-TYPE" 
                 TCGA-FN-7833                  TCGA-HT-7467 
  "DEL PEAK  2(1Q44) MUTATED" "DEL PEAK  2(1Q44) WILD-TYPE" 
                 TCGA-HT-7468                  TCGA-HT-7470 
"DEL PEAK  2(1Q44) WILD-TYPE" "DEL PEAK  2(1Q44) WILD-TYPE" 
                 TCGA-HT-7472                  TCGA-HT-7473 
"DEL PEAK  2(1Q44) WILD-TYPE" "DEL PEAK  2(1Q44) WILD-TYPE" 
                 TCGA-HT-7474                  TCGA-HT-7475 
"DEL PEAK  2(1Q44) WILD-TYPE" "DEL PEAK  2(1Q44) WILD-TYPE" 
                 TCGA-HT-7476                  TCGA-HT-7478 
"DEL PEAK  2(1Q44) WILD-TYPE" "DEL PEAK  2(1Q44) WILD-TYPE" 
                 TCGA-HT-7479                  TCGA-HT-7480 
"DEL PEAK  2(1Q44) WILD-TYPE" "DEL PEAK  2(1Q44) WILD-TYPE" 
                 TCGA-HT-7481                  TCGA-HT-7482 
"DEL PEAK  2(1Q44) WILD-TYPE" "DEL PEAK  2(1Q44) WILD-TYPE" 
                 TCGA-HT-7483                  TCGA-HT-7485 
"DEL PEAK  2(1Q44) WILD-TYPE"   "DEL PEAK  2(1Q44) MUTATED" 
                 TCGA-HT-7601                  TCGA-HT-7602 
"DEL PEAK  2(1Q44) WILD-TYPE" "DEL PEAK  2(1Q44) WILD-TYPE" 
                 TCGA-HT-7603                  TCGA-HT-7604 
"DEL PEAK  2(1Q44) WILD-TYPE" "DEL PEAK  2(1Q44) WILD-TYPE" 
                 TCGA-HT-7605                  TCGA-HT-7606 
"DEL PEAK  2(1Q44) WILD-TYPE" "DEL PEAK  2(1Q44) WILD-TYPE" 
                 TCGA-HT-7607                  TCGA-HT-7608 
"DEL PEAK  2(1Q44) WILD-TYPE" "DEL PEAK  2(1Q44) WILD-TYPE" 
                 TCGA-HT-7609                  TCGA-HT-7610 
"DEL PEAK  2(1Q44) WILD-TYPE" "DEL PEAK  2(1Q44) WILD-TYPE" 
                 TCGA-HW-7486                  TCGA-HW-7487 
"DEL PEAK  2(1Q44) WILD-TYPE" "DEL PEAK  2(1Q44) WILD-TYPE" 
                 TCGA-HW-7489                  TCGA-HW-7490 
"DEL PEAK  2(1Q44) WILD-TYPE" "DEL PEAK  2(1Q44) WILD-TYPE" 
                 TCGA-HW-7491                  TCGA-HW-7493 
"DEL PEAK  2(1Q44) WILD-TYPE" "DEL PEAK  2(1Q44) WILD-TYPE" 
                 TCGA-HW-7495                  TCGA-IK-7675 
"DEL PEAK  2(1Q44) WILD-TYPE" "DEL PEAK  2(1Q44) WILD-TYPE" 
                 TCGA-IK-8125 
"DEL PEAK  2(1Q44) WILD-TYPE" 
                 TCGA-CS-4938                  TCGA-CS-4941 
"DEL PEAK  2(1Q44) WILD-TYPE" "DEL PEAK  2(1Q44) WILD-TYPE" 
                 TCGA-CS-4942                  TCGA-CS-4943 
"DEL PEAK  2(1Q44) WILD-TYPE"   "DEL PEAK  2(1Q44) MUTATED" 
                 TCGA-CS-4944                  TCGA-CS-5390 
"DEL PEAK  2(1Q44) WILD-TYPE" "DEL PEAK  2(1Q44) WILD-TYPE" 
                 TCGA-CS-5393                  TCGA-CS-5394 
"DEL PEAK  2(1Q44) WILD-TYPE" "DEL PEAK  2(1Q44) WILD-TYPE" 
                 TCGA-CS-5395                  TCGA-CS-5396 
"DEL PEAK  2(1Q44) WILD-TYPE" "DEL PEAK  2(1Q44) WILD-TYPE" 
                 TCGA-CS-5397                  TCGA-CS-6186 
"DEL PEAK  2(1Q44) WILD-TYPE" "DEL PEAK  2(1Q44) WILD-TYPE" 
                 TCGA-CS-6188                  TCGA-CS-6290 
"DEL PEAK  2(1Q44) WILD-TYPE" "DEL PEAK  2(1Q44) WILD-TYPE" 
                 TCGA-CS-6665                  TCGA-CS-6666 
"DEL PEAK  2(1Q44) WILD-TYPE" "DEL PEAK  2(1Q44) WILD-TYPE" 
                 TCGA-CS-6667                  TCGA-CS-6668 
"DEL PEAK  2(1Q44) WILD-TYPE" "DEL PEAK  2(1Q44) WILD-TYPE" 
                 TCGA-CS-6669                  TCGA-CS-6670 
"DEL PEAK  2(1Q44) WILD-TYPE" "DEL PEAK  2(1Q44) WILD-TYPE" 
                 TCGA-DB-5270                  TCGA-DB-5273 
"DEL PEAK  2(1Q44) WILD-TYPE" "DEL PEAK  2(1Q44) WILD-TYPE" 
                 TCGA-DB-5274                  TCGA-DB-5275 
"DEL PEAK  2(1Q44) WILD-TYPE" "DEL PEAK  2(1Q44) WILD-TYPE" 
                 TCGA-DB-5276                  TCGA-DB-5277 
"DEL PEAK  2(1Q44) WILD-TYPE" "DEL PEAK  2(1Q44) WILD-TYPE" 
                 TCGA-DB-5278                  TCGA-DB-5279 
"DEL PEAK  2(1Q44) WILD-TYPE" "DEL PEAK  2(1Q44) WILD-TYPE" 
                 TCGA-DB-5280                  TCGA-DB-5281 
"DEL PEAK  2(1Q44) WILD-TYPE" "DEL PEAK  2(1Q44) WILD-TYPE" 
                 TCGA-DH-5140                  TCGA-DH-5141 
"DEL PEAK  2(1Q44) WILD-TYPE" "DEL PEAK  2(1Q44) WILD-TYPE" 
                 TCGA-DH-5142                  TCGA-DH-5143 
"DEL PEAK  2(1Q44) WILD-TYPE" "DEL PEAK  2(1Q44) WILD-TYPE" 
                 TCGA-DH-5144                  TCGA-DU-5847 
"DEL PEAK  2(1Q44) WILD-TYPE" "DEL PEAK  2(1Q44) WILD-TYPE" 
                 TCGA-DU-5849                  TCGA-DU-5851 
"DEL PEAK  2(1Q44) WILD-TYPE" "DEL PEAK  2(1Q44) WILD-TYPE" 
                 TCGA-DU-5852                  TCGA-DU-5853 
"DEL PEAK  2(1Q44) WILD-TYPE" "DEL PEAK  2(1Q44) WILD-TYPE" 
                 TCGA-DU-5854                  TCGA-DU-5855 
"DEL PEAK  2(1Q44) WILD-TYPE" "DEL PEAK  2(1Q44) WILD-TYPE" 
                 TCGA-DU-5870                  TCGA-DU-5871 
"DEL PEAK  2(1Q44) WILD-TYPE"   "DEL PEAK  2(1Q44) MUTATED" 
                 TCGA-DU-5872                  TCGA-DU-5874 
"DEL PEAK  2(1Q44) WILD-TYPE" "DEL PEAK  2(1Q44) WILD-TYPE" 
                 TCGA-DU-6392                  TCGA-DU-6393 
"DEL PEAK  2(1Q44) WILD-TYPE" "DEL PEAK  2(1Q44) WILD-TYPE" 
                 TCGA-DU-6394                  TCGA-DU-6395 
"DEL PEAK  2(1Q44) WILD-TYPE" "DEL PEAK  2(1Q44) WILD-TYPE" 
                 TCGA-DU-6396                  TCGA-DU-6397 
  "DEL PEAK  2(1Q44) MUTATED" "DEL PEAK  2(1Q44) WILD-TYPE" 
                 TCGA-DU-6399                  TCGA-DU-6400 
"DEL PEAK  2(1Q44) WILD-TYPE" "DEL PEAK  2(1Q44) WILD-TYPE" 
                 TCGA-DU-6401                  TCGA-DU-6402 
"DEL PEAK  2(1Q44) WILD-TYPE" "DEL PEAK  2(1Q44) WILD-TYPE" 
                 TCGA-DU-6403                  TCGA-DU-6404 
"DEL PEAK  2(1Q44) WILD-TYPE" "DEL PEAK  2(1Q44) WILD-TYPE" 
                 TCGA-DU-6405                  TCGA-DU-6406 
"DEL PEAK  2(1Q44) WILD-TYPE" "DEL PEAK  2(1Q44) WILD-TYPE" 
                 TCGA-DU-6407                  TCGA-DU-6408 
"DEL PEAK  2(1Q44) WILD-TYPE" "DEL PEAK  2(1Q44) WILD-TYPE" 
                 TCGA-DU-6410                  TCGA-DU-6542 
"DEL PEAK  2(1Q44) WILD-TYPE"   "DEL PEAK  2(1Q44) MUTATED" 
                 TCGA-DU-7006                  TCGA-DU-7007 
"DEL PEAK  2(1Q44) WILD-TYPE" "DEL PEAK  2(1Q44) WILD-TYPE" 
                 TCGA-DU-7008                  TCGA-DU-7009 
"DEL PEAK  2(1Q44) WILD-TYPE" "DEL PEAK  2(1Q44) WILD-TYPE" 
                 TCGA-DU-7010                  TCGA-DU-7011 
"DEL PEAK  2(1Q44) WILD-TYPE" "DEL PEAK  2(1Q44) WILD-TYPE" 
                 TCGA-DU-7012                  TCGA-DU-7013 
"DEL PEAK  2(1Q44) WILD-TYPE" "DEL PEAK  2(1Q44) WILD-TYPE" 
                 TCGA-DU-7014                  TCGA-DU-7015 
"DEL PEAK  2(1Q44) WILD-TYPE"   "DEL PEAK  2(1Q44) MUTATED" 
                 TCGA-DU-7018                  TCGA-DU-7019 
"DEL PEAK  2(1Q44) WILD-TYPE" "DEL PEAK  2(1Q44) WILD-TYPE" 
                 TCGA-DU-7290                  TCGA-DU-7292 
"DEL PEAK  2(1Q44) WILD-TYPE" "DEL PEAK  2(1Q44) WILD-TYPE" 
                 TCGA-DU-7294                  TCGA-DU-7298 
"DEL PEAK  2(1Q44) WILD-TYPE" "DEL PEAK  2(1Q44) WILD-TYPE" 
                 TCGA-DU-7299                  TCGA-DU-7300 
"DEL PEAK  2(1Q44) WILD-TYPE" "DEL PEAK  2(1Q44) WILD-TYPE" 
                 TCGA-DU-7301                  TCGA-DU-7302 
"DEL PEAK  2(1Q44) WILD-TYPE" "DEL PEAK  2(1Q44) WILD-TYPE" 
                 TCGA-DU-7304                  TCGA-DU-7306 
"DEL PEAK  2(1Q44) WILD-TYPE" "DEL PEAK  2(1Q44) WILD-TYPE" 
                 TCGA-DU-7309                  TCGA-E1-5302 
"DEL PEAK  2(1Q44) WILD-TYPE"   "DEL PEAK  2(1Q44) MUTATED" 
                 TCGA-E1-5303                  TCGA-E1-5304 
"DEL PEAK  2(1Q44) WILD-TYPE" "DEL PEAK  2(1Q44) WILD-TYPE" 
                 TCGA-E1-5305                  TCGA-E1-5307 
"DEL PEAK  2(1Q44) WILD-TYPE" "DEL PEAK  2(1Q44) WILD-TYPE" 
                 TCGA-E1-5311                  TCGA-E1-5318 
"DEL PEAK  2(1Q44) WILD-TYPE" "DEL PEAK  2(1Q44) WILD-TYPE" 
                 TCGA-E1-5319                  TCGA-E1-5322 
"DEL PEAK  2(1Q44) WILD-TYPE"   "DEL PEAK  2(1Q44) MUTATED" 
                 TCGA-EZ-7264                  TCGA-FG-5962 
"DEL PEAK  2(1Q44) WILD-TYPE" "DEL PEAK  2(1Q44) WILD-TYPE" 
                 TCGA-FG-5963                  TCGA-FG-5964 
"DEL PEAK  2(1Q44) WILD-TYPE" "DEL PEAK  2(1Q44) WILD-TYPE" 
                 TCGA-FG-5965                  TCGA-FG-6688 
"DEL PEAK  2(1Q44) WILD-TYPE" "DEL PEAK  2(1Q44) WILD-TYPE" 
                 TCGA-FG-6689                  TCGA-FG-6690 
"DEL PEAK  2(1Q44) WILD-TYPE" "DEL PEAK  2(1Q44) WILD-TYPE" 
                 TCGA-FG-6691                  TCGA-FG-6692 
"DEL PEAK  2(1Q44) WILD-TYPE" "DEL PEAK  2(1Q44) WILD-TYPE" 
                 TCGA-FG-7634                  TCGA-FG-7636 
"DEL PEAK  2(1Q44) WILD-TYPE"   "DEL PEAK  2(1Q44) MUTATED" 
                 TCGA-FG-7638                  TCGA-FG-7643 
"DEL PEAK  2(1Q44) WILD-TYPE" "DEL PEAK  2(1Q44) WILD-TYPE" 
                 TCGA-FN-7833                  TCGA-HT-7467 
  "DEL PEAK  2(1Q44) MUTATED" "DEL PEAK  2(1Q44) WILD-TYPE" 
                 TCGA-HT-7468                  TCGA-HT-7470 
"DEL PEAK  2(1Q44) WILD-TYPE" "DEL PEAK  2(1Q44) WILD-TYPE" 
                 TCGA-HT-7472                  TCGA-HT-7473 
"DEL PEAK  2(1Q44) WILD-TYPE" "DEL PEAK  2(1Q44) WILD-TYPE" 
                 TCGA-HT-7474                  TCGA-HT-7475 
"DEL PEAK  2(1Q44) WILD-TYPE" "DEL PEAK  2(1Q44) WILD-TYPE" 
                 TCGA-HT-7476                  TCGA-HT-7478 
"DEL PEAK  2(1Q44) WILD-TYPE" "DEL PEAK  2(1Q44) WILD-TYPE" 
                 TCGA-HT-7479                  TCGA-HT-7480 
"DEL PEAK  2(1Q44) WILD-TYPE" "DEL PEAK  2(1Q44) WILD-TYPE" 
                 TCGA-HT-7481                  TCGA-HT-7482 
"DEL PEAK  2(1Q44) WILD-TYPE" "DEL PEAK  2(1Q44) WILD-TYPE" 
                 TCGA-HT-7483                  TCGA-HT-7485 
"DEL PEAK  2(1Q44) WILD-TYPE"   "DEL PEAK  2(1Q44) MUTATED" 
                 TCGA-HT-7601                  TCGA-HT-7602 
"DEL PEAK  2(1Q44) WILD-TYPE" "DEL PEAK  2(1Q44) WILD-TYPE" 
                 TCGA-HT-7603                  TCGA-HT-7604 
"DEL PEAK  2(1Q44) WILD-TYPE" "DEL PEAK  2(1Q44) WILD-TYPE" 
                 TCGA-HT-7605                  TCGA-HT-7606 
"DEL PEAK  2(1Q44) WILD-TYPE" "DEL PEAK  2(1Q44) WILD-TYPE" 
                 TCGA-HT-7607                  TCGA-HT-7608 
"DEL PEAK  2(1Q44) WILD-TYPE" "DEL PEAK  2(1Q44) WILD-TYPE" 
                 TCGA-HT-7609                  TCGA-HT-7610 
"DEL PEAK  2(1Q44) WILD-TYPE" "DEL PEAK  2(1Q44) WILD-TYPE" 
                 TCGA-HW-7486                  TCGA-HW-7487 
"DEL PEAK  2(1Q44) WILD-TYPE" "DEL PEAK  2(1Q44) WILD-TYPE" 
                 TCGA-HW-7489                  TCGA-HW-7490 
"DEL PEAK  2(1Q44) WILD-TYPE" "DEL PEAK  2(1Q44) WILD-TYPE" 
                 TCGA-HW-7491                  TCGA-HW-7493 
"DEL PEAK  2(1Q44) WILD-TYPE" "DEL PEAK  2(1Q44) WILD-TYPE" 
                 TCGA-HW-7495                  TCGA-IK-7675 
"DEL PEAK  2(1Q44) WILD-TYPE" "DEL PEAK  2(1Q44) WILD-TYPE" 
                 TCGA-IK-8125 
"DEL PEAK  2(1Q44) WILD-TYPE" 
                 TCGA-CS-4938                  TCGA-CS-4941 
"DEL PEAK  2(1Q44) WILD-TYPE" "DEL PEAK  2(1Q44) WILD-TYPE" 
                 TCGA-CS-4942                  TCGA-CS-4943 
"DEL PEAK  2(1Q44) WILD-TYPE"   "DEL PEAK  2(1Q44) MUTATED" 
                 TCGA-CS-4944                  TCGA-CS-5390 
"DEL PEAK  2(1Q44) WILD-TYPE" "DEL PEAK  2(1Q44) WILD-TYPE" 
                 TCGA-CS-5393                  TCGA-CS-5394 
"DEL PEAK  2(1Q44) WILD-TYPE" "DEL PEAK  2(1Q44) WILD-TYPE" 
                 TCGA-CS-5395                  TCGA-CS-5396 
"DEL PEAK  2(1Q44) WILD-TYPE" "DEL PEAK  2(1Q44) WILD-TYPE" 
                 TCGA-CS-5397                  TCGA-CS-6186 
"DEL PEAK  2(1Q44) WILD-TYPE" "DEL PEAK  2(1Q44) WILD-TYPE" 
                 TCGA-CS-6188                  TCGA-CS-6290 
"DEL PEAK  2(1Q44) WILD-TYPE" "DEL PEAK  2(1Q44) WILD-TYPE" 
                 TCGA-CS-6665                  TCGA-CS-6666 
"DEL PEAK  2(1Q44) WILD-TYPE" "DEL PEAK  2(1Q44) WILD-TYPE" 
                 TCGA-CS-6667                  TCGA-CS-6668 
"DEL PEAK  2(1Q44) WILD-TYPE" "DEL PEAK  2(1Q44) WILD-TYPE" 
                 TCGA-CS-6669                  TCGA-CS-6670 
"DEL PEAK  2(1Q44) WILD-TYPE" "DEL PEAK  2(1Q44) WILD-TYPE" 
                 TCGA-DB-5270                  TCGA-DB-5273 
"DEL PEAK  2(1Q44) WILD-TYPE" "DEL PEAK  2(1Q44) WILD-TYPE" 
                 TCGA-DB-5274                  TCGA-DB-5275 
"DEL PEAK  2(1Q44) WILD-TYPE" "DEL PEAK  2(1Q44) WILD-TYPE" 
                 TCGA-DB-5276                  TCGA-DB-5277 
"DEL PEAK  2(1Q44) WILD-TYPE" "DEL PEAK  2(1Q44) WILD-TYPE" 
                 TCGA-DB-5278                  TCGA-DB-5279 
"DEL PEAK  2(1Q44) WILD-TYPE" "DEL PEAK  2(1Q44) WILD-TYPE" 
                 TCGA-DB-5280                  TCGA-DB-5281 
"DEL PEAK  2(1Q44) WILD-TYPE" "DEL PEAK  2(1Q44) WILD-TYPE" 
                 TCGA-DH-5140                  TCGA-DH-5141 
"DEL PEAK  2(1Q44) WILD-TYPE" "DEL PEAK  2(1Q44) WILD-TYPE" 
                 TCGA-DH-5142                  TCGA-DH-5143 
"DEL PEAK  2(1Q44) WILD-TYPE" "DEL PEAK  2(1Q44) WILD-TYPE" 
                 TCGA-DH-5144                  TCGA-DU-5847 
"DEL PEAK  2(1Q44) WILD-TYPE" "DEL PEAK  2(1Q44) WILD-TYPE" 
                 TCGA-DU-5849                  TCGA-DU-5851 
"DEL PEAK  2(1Q44) WILD-TYPE" "DEL PEAK  2(1Q44) WILD-TYPE" 
                 TCGA-DU-5852                  TCGA-DU-5853 
"DEL PEAK  2(1Q44) WILD-TYPE" "DEL PEAK  2(1Q44) WILD-TYPE" 
                 TCGA-DU-5854                  TCGA-DU-5855 
"DEL PEAK  2(1Q44) WILD-TYPE" "DEL PEAK  2(1Q44) WILD-TYPE" 
                 TCGA-DU-5870                  TCGA-DU-5871 
"DEL PEAK  2(1Q44) WILD-TYPE"   "DEL PEAK  2(1Q44) MUTATED" 
                 TCGA-DU-5872                  TCGA-DU-5874 
"DEL PEAK  2(1Q44) WILD-TYPE" "DEL PEAK  2(1Q44) WILD-TYPE" 
                 TCGA-DU-6392                  TCGA-DU-6393 
"DEL PEAK  2(1Q44) WILD-TYPE" "DEL PEAK  2(1Q44) WILD-TYPE" 
                 TCGA-DU-6394                  TCGA-DU-6395 
"DEL PEAK  2(1Q44) WILD-TYPE" "DEL PEAK  2(1Q44) WILD-TYPE" 
                 TCGA-DU-6396                  TCGA-DU-6397 
  "DEL PEAK  2(1Q44) MUTATED" "DEL PEAK  2(1Q44) WILD-TYPE" 
                 TCGA-DU-6399                  TCGA-DU-6400 
"DEL PEAK  2(1Q44) WILD-TYPE" "DEL PEAK  2(1Q44) WILD-TYPE" 
                 TCGA-DU-6401                  TCGA-DU-6402 
"DEL PEAK  2(1Q44) WILD-TYPE" "DEL PEAK  2(1Q44) WILD-TYPE" 
                 TCGA-DU-6403                  TCGA-DU-6404 
"DEL PEAK  2(1Q44) WILD-TYPE" "DEL PEAK  2(1Q44) WILD-TYPE" 
                 TCGA-DU-6405                  TCGA-DU-6406 
"DEL PEAK  2(1Q44) WILD-TYPE" "DEL PEAK  2(1Q44) WILD-TYPE" 
                 TCGA-DU-6407                  TCGA-DU-6408 
"DEL PEAK  2(1Q44) WILD-TYPE" "DEL PEAK  2(1Q44) WILD-TYPE" 
                 TCGA-DU-6410                  TCGA-DU-6542 
"DEL PEAK  2(1Q44) WILD-TYPE"   "DEL PEAK  2(1Q44) MUTATED" 
                 TCGA-DU-7006                  TCGA-DU-7007 
"DEL PEAK  2(1Q44) WILD-TYPE" "DEL PEAK  2(1Q44) WILD-TYPE" 
                 TCGA-DU-7008                  TCGA-DU-7009 
"DEL PEAK  2(1Q44) WILD-TYPE" "DEL PEAK  2(1Q44) WILD-TYPE" 
                 TCGA-DU-7010                  TCGA-DU-7011 
"DEL PEAK  2(1Q44) WILD-TYPE" "DEL PEAK  2(1Q44) WILD-TYPE" 
                 TCGA-DU-7012                  TCGA-DU-7013 
"DEL PEAK  2(1Q44) WILD-TYPE" "DEL PEAK  2(1Q44) WILD-TYPE" 
                 TCGA-DU-7014                  TCGA-DU-7015 
"DEL PEAK  2(1Q44) WILD-TYPE"   "DEL PEAK  2(1Q44) MUTATED" 
                 TCGA-DU-7018                  TCGA-DU-7019 
"DEL PEAK  2(1Q44) WILD-TYPE" "DEL PEAK  2(1Q44) WILD-TYPE" 
                 TCGA-DU-7290                  TCGA-DU-7292 
"DEL PEAK  2(1Q44) WILD-TYPE" "DEL PEAK  2(1Q44) WILD-TYPE" 
                 TCGA-DU-7294                  TCGA-DU-7298 
"DEL PEAK  2(1Q44) WILD-TYPE" "DEL PEAK  2(1Q44) WILD-TYPE" 
                 TCGA-DU-7299                  TCGA-DU-7300 
"DEL PEAK  2(1Q44) WILD-TYPE" "DEL PEAK  2(1Q44) WILD-TYPE" 
                 TCGA-DU-7301                  TCGA-DU-7302 
"DEL PEAK  2(1Q44) WILD-TYPE" "DEL PEAK  2(1Q44) WILD-TYPE" 
                 TCGA-DU-7304                  TCGA-DU-7306 
"DEL PEAK  2(1Q44) WILD-TYPE" "DEL PEAK  2(1Q44) WILD-TYPE" 
                 TCGA-DU-7309                  TCGA-E1-5302 
"DEL PEAK  2(1Q44) WILD-TYPE"   "DEL PEAK  2(1Q44) MUTATED" 
                 TCGA-E1-5303                  TCGA-E1-5304 
"DEL PEAK  2(1Q44) WILD-TYPE" "DEL PEAK  2(1Q44) WILD-TYPE" 
                 TCGA-E1-5305                  TCGA-E1-5307 
"DEL PEAK  2(1Q44) WILD-TYPE" "DEL PEAK  2(1Q44) WILD-TYPE" 
                 TCGA-E1-5311                  TCGA-E1-5318 
"DEL PEAK  2(1Q44) WILD-TYPE" "DEL PEAK  2(1Q44) WILD-TYPE" 
                 TCGA-E1-5319                  TCGA-E1-5322 
"DEL PEAK  2(1Q44) WILD-TYPE"   "DEL PEAK  2(1Q44) MUTATED" 
                 TCGA-EZ-7264                  TCGA-FG-5962 
"DEL PEAK  2(1Q44) WILD-TYPE" "DEL PEAK  2(1Q44) WILD-TYPE" 
                 TCGA-FG-5963                  TCGA-FG-5964 
"DEL PEAK  2(1Q44) WILD-TYPE" "DEL PEAK  2(1Q44) WILD-TYPE" 
                 TCGA-FG-5965                  TCGA-FG-6688 
"DEL PEAK  2(1Q44) WILD-TYPE" "DEL PEAK  2(1Q44) WILD-TYPE" 
                 TCGA-FG-6689                  TCGA-FG-6690 
"DEL PEAK  2(1Q44) WILD-TYPE" "DEL PEAK  2(1Q44) WILD-TYPE" 
                 TCGA-FG-6691                  TCGA-FG-6692 
"DEL PEAK  2(1Q44) WILD-TYPE" "DEL PEAK  2(1Q44) WILD-TYPE" 
                 TCGA-FG-7634                  TCGA-FG-7636 
"DEL PEAK  2(1Q44) WILD-TYPE"   "DEL PEAK  2(1Q44) MUTATED" 
                 TCGA-FG-7638                  TCGA-FG-7643 
"DEL PEAK  2(1Q44) WILD-TYPE" "DEL PEAK  2(1Q44) WILD-TYPE" 
                 TCGA-FN-7833                  TCGA-HT-7467 
  "DEL PEAK  2(1Q44) MUTATED" "DEL PEAK  2(1Q44) WILD-TYPE" 
                 TCGA-HT-7468                  TCGA-HT-7470 
"DEL PEAK  2(1Q44) WILD-TYPE" "DEL PEAK  2(1Q44) WILD-TYPE" 
                 TCGA-HT-7472                  TCGA-HT-7473 
"DEL PEAK  2(1Q44) WILD-TYPE" "DEL PEAK  2(1Q44) WILD-TYPE" 
                 TCGA-HT-7474                  TCGA-HT-7475 
"DEL PEAK  2(1Q44) WILD-TYPE" "DEL PEAK  2(1Q44) WILD-TYPE" 
                 TCGA-HT-7476                  TCGA-HT-7478 
"DEL PEAK  2(1Q44) WILD-TYPE" "DEL PEAK  2(1Q44) WILD-TYPE" 
                 TCGA-HT-7479                  TCGA-HT-7480 
"DEL PEAK  2(1Q44) WILD-TYPE" "DEL PEAK  2(1Q44) WILD-TYPE" 
                 TCGA-HT-7481                  TCGA-HT-7482 
"DEL PEAK  2(1Q44) WILD-TYPE" "DEL PEAK  2(1Q44) WILD-TYPE" 
                 TCGA-HT-7483                  TCGA-HT-7485 
"DEL PEAK  2(1Q44) WILD-TYPE"   "DEL PEAK  2(1Q44) MUTATED" 
                 TCGA-HT-7601                  TCGA-HT-7602 
"DEL PEAK  2(1Q44) WILD-TYPE" "DEL PEAK  2(1Q44) WILD-TYPE" 
                 TCGA-HT-7603                  TCGA-HT-7604 
"DEL PEAK  2(1Q44) WILD-TYPE" "DEL PEAK  2(1Q44) WILD-TYPE" 
                 TCGA-HT-7605                  TCGA-HT-7606 
"DEL PEAK  2(1Q44) WILD-TYPE" "DEL PEAK  2(1Q44) WILD-TYPE" 
                 TCGA-HT-7607                  TCGA-HT-7608 
"DEL PEAK  2(1Q44) WILD-TYPE" "DEL PEAK  2(1Q44) WILD-TYPE" 
                 TCGA-HT-7609                  TCGA-HT-7610 
"DEL PEAK  2(1Q44) WILD-TYPE" "DEL PEAK  2(1Q44) WILD-TYPE" 
                 TCGA-HW-7486                  TCGA-HW-7487 
"DEL PEAK  2(1Q44) WILD-TYPE" "DEL PEAK  2(1Q44) WILD-TYPE" 
                 TCGA-HW-7489                  TCGA-HW-7490 
"DEL PEAK  2(1Q44) WILD-TYPE" "DEL PEAK  2(1Q44) WILD-TYPE" 
                 TCGA-HW-7491                  TCGA-HW-7493 
"DEL PEAK  2(1Q44) WILD-TYPE" "DEL PEAK  2(1Q44) WILD-TYPE" 
                 TCGA-HW-7495                  TCGA-IK-7675 
"DEL PEAK  2(1Q44) WILD-TYPE" "DEL PEAK  2(1Q44) WILD-TYPE" 
                 TCGA-IK-8125 
"DEL PEAK  2(1Q44) WILD-TYPE" 
[1] "hr=" "1.3"
D16V2, continuous
D16V3, binary
[1] "tbl2"
                             cls
clus                          [,1] [,2]
  DEL PEAK  2(1Q44) MUTATED      4    6
  DEL PEAK  2(1Q44) WILD-TYPE   58   77
        clus
vv       DEL PEAK  2(1Q44) MUTATED DEL PEAK  2(1Q44) WILD-TYPE
  FEMALE                         4                          58
  MALE                           6                          77
D16V4, continuous
D16V5, multiclass
                   clus
vv                  DEL PEAK  2(1Q44) MUTATED DEL PEAK  2(1Q44) WILD-TYPE
  ASTROCYTOMA                               4                          46
  OLIGOASTROCYTOMA                          4                          32
  OLIGODENDROGLIOMA                         1                          57
D16V6, binary
[1] "tbl2"
                             cls
clus                          [,1] [,2]
  DEL PEAK  2(1Q44) MUTATED      4    6
  DEL PEAK  2(1Q44) WILD-TYPE   55   80
     clus
vv    DEL PEAK  2(1Q44) MUTATED DEL PEAK  2(1Q44) WILD-TYPE
  NO                          6                          80
  YES                         4                          55
D16V7, binary
[1] "tbl2"
                             cls
clus                          [,1] [,2]
  DEL PEAK  2(1Q44) MUTATED      4    6
  DEL PEAK  2(1Q44) WILD-TYPE   70   65
     clus
vv    DEL PEAK  2(1Q44) MUTATED DEL PEAK  2(1Q44) WILD-TYPE
  NO                          6                          65
  YES                         4                          70

Clustering(17) Variable = Del Peak  3(2q37.3) mutation analysis
D17V1, survival
                   TCGA-CS-4938                    TCGA-CS-4941 
"DEL PEAK  3(2Q37.3) WILD-TYPE" "DEL PEAK  3(2Q37.3) WILD-TYPE" 
                   TCGA-CS-4942                    TCGA-CS-4943 
"DEL PEAK  3(2Q37.3) WILD-TYPE"   "DEL PEAK  3(2Q37.3) MUTATED" 
                   TCGA-CS-4944                    TCGA-CS-5390 
"DEL PEAK  3(2Q37.3) WILD-TYPE" "DEL PEAK  3(2Q37.3) WILD-TYPE" 
                   TCGA-CS-5393                    TCGA-CS-5394 
"DEL PEAK  3(2Q37.3) WILD-TYPE" "DEL PEAK  3(2Q37.3) WILD-TYPE" 
                   TCGA-CS-5395                    TCGA-CS-5396 
"DEL PEAK  3(2Q37.3) WILD-TYPE" "DEL PEAK  3(2Q37.3) WILD-TYPE" 
                   TCGA-CS-5397                    TCGA-CS-6186 
  "DEL PEAK  3(2Q37.3) MUTATED" "DEL PEAK  3(2Q37.3) WILD-TYPE" 
                   TCGA-CS-6188                    TCGA-CS-6290 
"DEL PEAK  3(2Q37.3) WILD-TYPE" "DEL PEAK  3(2Q37.3) WILD-TYPE" 
                   TCGA-CS-6665                    TCGA-CS-6666 
"DEL PEAK  3(2Q37.3) WILD-TYPE"   "DEL PEAK  3(2Q37.3) MUTATED" 
                   TCGA-CS-6667                    TCGA-CS-6668 
"DEL PEAK  3(2Q37.3) WILD-TYPE" "DEL PEAK  3(2Q37.3) WILD-TYPE" 
                   TCGA-CS-6669                    TCGA-CS-6670 
"DEL PEAK  3(2Q37.3) WILD-TYPE" "DEL PEAK  3(2Q37.3) WILD-TYPE" 
                   TCGA-DB-5270                    TCGA-DB-5273 
  "DEL PEAK  3(2Q37.3) MUTATED" "DEL PEAK  3(2Q37.3) WILD-TYPE" 
                   TCGA-DB-5274                    TCGA-DB-5275 
"DEL PEAK  3(2Q37.3) WILD-TYPE" "DEL PEAK  3(2Q37.3) WILD-TYPE" 
                   TCGA-DB-5276                    TCGA-DB-5277 
"DEL PEAK  3(2Q37.3) WILD-TYPE"   "DEL PEAK  3(2Q37.3) MUTATED" 
                   TCGA-DB-5278                    TCGA-DB-5279 
"DEL PEAK  3(2Q37.3) WILD-TYPE" "DEL PEAK  3(2Q37.3) WILD-TYPE" 
                   TCGA-DB-5280                    TCGA-DB-5281 
"DEL PEAK  3(2Q37.3) WILD-TYPE"   "DEL PEAK  3(2Q37.3) MUTATED" 
                   TCGA-DH-5140                    TCGA-DH-5141 
"DEL PEAK  3(2Q37.3) WILD-TYPE" "DEL PEAK  3(2Q37.3) WILD-TYPE" 
                   TCGA-DH-5142                    TCGA-DH-5143 
  "DEL PEAK  3(2Q37.3) MUTATED" "DEL PEAK  3(2Q37.3) WILD-TYPE" 
                   TCGA-DH-5144                    TCGA-DU-5847 
"DEL PEAK  3(2Q37.3) WILD-TYPE" "DEL PEAK  3(2Q37.3) WILD-TYPE" 
                   TCGA-DU-5849                    TCGA-DU-5851 
"DEL PEAK  3(2Q37.3) WILD-TYPE" "DEL PEAK  3(2Q37.3) WILD-TYPE" 
                   TCGA-DU-5852                    TCGA-DU-5853 
"DEL PEAK  3(2Q37.3) WILD-TYPE" "DEL PEAK  3(2Q37.3) WILD-TYPE" 
                   TCGA-DU-5854                    TCGA-DU-5855 
"DEL PEAK  3(2Q37.3) WILD-TYPE"   "DEL PEAK  3(2Q37.3) MUTATED" 
                   TCGA-DU-5870                    TCGA-DU-5871 
"DEL PEAK  3(2Q37.3) WILD-TYPE" "DEL PEAK  3(2Q37.3) WILD-TYPE" 
                   TCGA-DU-5872                    TCGA-DU-5874 
"DEL PEAK  3(2Q37.3) WILD-TYPE" "DEL PEAK  3(2Q37.3) WILD-TYPE" 
                   TCGA-DU-6392                    TCGA-DU-6393 
"DEL PEAK  3(2Q37.3) WILD-TYPE" "DEL PEAK  3(2Q37.3) WILD-TYPE" 
                   TCGA-DU-6394                    TCGA-DU-6395 
"DEL PEAK  3(2Q37.3) WILD-TYPE"   "DEL PEAK  3(2Q37.3) MUTATED" 
                   TCGA-DU-6396                    TCGA-DU-6397 
  "DEL PEAK  3(2Q37.3) MUTATED" "DEL PEAK  3(2Q37.3) WILD-TYPE" 
                   TCGA-DU-6399                    TCGA-DU-6400 
"DEL PEAK  3(2Q37.3) WILD-TYPE" "DEL PEAK  3(2Q37.3) WILD-TYPE" 
                   TCGA-DU-6401                    TCGA-DU-6402 
"DEL PEAK  3(2Q37.3) WILD-TYPE" "DEL PEAK  3(2Q37.3) WILD-TYPE" 
                   TCGA-DU-6403                    TCGA-DU-6404 
"DEL PEAK  3(2Q37.3) WILD-TYPE" "DEL PEAK  3(2Q37.3) WILD-TYPE" 
                   TCGA-DU-6405                    TCGA-DU-6406 
"DEL PEAK  3(2Q37.3) WILD-TYPE" "DEL PEAK  3(2Q37.3) WILD-TYPE" 
                   TCGA-DU-6407                    TCGA-DU-6408 
  "DEL PEAK  3(2Q37.3) MUTATED"   "DEL PEAK  3(2Q37.3) MUTATED" 
                   TCGA-DU-6410                    TCGA-DU-6542 
"DEL PEAK  3(2Q37.3) WILD-TYPE"   "DEL PEAK  3(2Q37.3) MUTATED" 
                   TCGA-DU-7006                    TCGA-DU-7007 
"DEL PEAK  3(2Q37.3) WILD-TYPE"   "DEL PEAK  3(2Q37.3) MUTATED" 
                   TCGA-DU-7008                    TCGA-DU-7009 
  "DEL PEAK  3(2Q37.3) MUTATED" "DEL PEAK  3(2Q37.3) WILD-TYPE" 
                   TCGA-DU-7010                    TCGA-DU-7011 
"DEL PEAK  3(2Q37.3) WILD-TYPE" "DEL PEAK  3(2Q37.3) WILD-TYPE" 
                   TCGA-DU-7012                    TCGA-DU-7013 
"DEL PEAK  3(2Q37.3) WILD-TYPE" "DEL PEAK  3(2Q37.3) WILD-TYPE" 
                   TCGA-DU-7014                    TCGA-DU-7015 
  "DEL PEAK  3(2Q37.3) MUTATED" "DEL PEAK  3(2Q37.3) WILD-TYPE" 
                   TCGA-DU-7018                    TCGA-DU-7019 
"DEL PEAK  3(2Q37.3) WILD-TYPE" "DEL PEAK  3(2Q37.3) WILD-TYPE" 
                   TCGA-DU-7290                    TCGA-DU-7292 
"DEL PEAK  3(2Q37.3) WILD-TYPE" "DEL PEAK  3(2Q37.3) WILD-TYPE" 
                   TCGA-DU-7294                    TCGA-DU-7298 
"DEL PEAK  3(2Q37.3) WILD-TYPE" "DEL PEAK  3(2Q37.3) WILD-TYPE" 
                   TCGA-DU-7299                    TCGA-DU-7300 
"DEL PEAK  3(2Q37.3) WILD-TYPE" "DEL PEAK  3(2Q37.3) WILD-TYPE" 
                   TCGA-DU-7301                    TCGA-DU-7302 
"DEL PEAK  3(2Q37.3) WILD-TYPE" "DEL PEAK  3(2Q37.3) WILD-TYPE" 
                   TCGA-DU-7304                    TCGA-DU-7306 
  "DEL PEAK  3(2Q37.3) MUTATED"   "DEL PEAK  3(2Q37.3) MUTATED" 
                   TCGA-DU-7309                    TCGA-E1-5302 
"DEL PEAK  3(2Q37.3) WILD-TYPE" "DEL PEAK  3(2Q37.3) WILD-TYPE" 
                   TCGA-E1-5303                    TCGA-E1-5304 
"DEL PEAK  3(2Q37.3) WILD-TYPE"   "DEL PEAK  3(2Q37.3) MUTATED" 
                   TCGA-E1-5305                    TCGA-E1-5307 
"DEL PEAK  3(2Q37.3) WILD-TYPE" "DEL PEAK  3(2Q37.3) WILD-TYPE" 
                   TCGA-E1-5311                    TCGA-E1-5318 
  "DEL PEAK  3(2Q37.3) MUTATED" "DEL PEAK  3(2Q37.3) WILD-TYPE" 
                   TCGA-E1-5319                    TCGA-E1-5322 
"DEL PEAK  3(2Q37.3) WILD-TYPE" "DEL PEAK  3(2Q37.3) WILD-TYPE" 
                   TCGA-EZ-7264                    TCGA-FG-5962 
"DEL PEAK  3(2Q37.3) WILD-TYPE" "DEL PEAK  3(2Q37.3) WILD-TYPE" 
                   TCGA-FG-5963                    TCGA-FG-5964 
"DEL PEAK  3(2Q37.3) WILD-TYPE" "DEL PEAK  3(2Q37.3) WILD-TYPE" 
                   TCGA-FG-5965                    TCGA-FG-6688 
"DEL PEAK  3(2Q37.3) WILD-TYPE" "DEL PEAK  3(2Q37.3) WILD-TYPE" 
                   TCGA-FG-6689                    TCGA-FG-6690 
"DEL PEAK  3(2Q37.3) WILD-TYPE" "DEL PEAK  3(2Q37.3) WILD-TYPE" 
                   TCGA-FG-6691                    TCGA-FG-6692 
"DEL PEAK  3(2Q37.3) WILD-TYPE" "DEL PEAK  3(2Q37.3) WILD-TYPE" 
                   TCGA-FG-7634                    TCGA-FG-7636 
"DEL PEAK  3(2Q37.3) WILD-TYPE" "DEL PEAK  3(2Q37.3) WILD-TYPE" 
                   TCGA-FG-7638                    TCGA-FG-7643 
"DEL PEAK  3(2Q37.3) WILD-TYPE" "DEL PEAK  3(2Q37.3) WILD-TYPE" 
                   TCGA-FN-7833                    TCGA-HT-7467 
"DEL PEAK  3(2Q37.3) WILD-TYPE" "DEL PEAK  3(2Q37.3) WILD-TYPE" 
                   TCGA-HT-7468                    TCGA-HT-7470 
"DEL PEAK  3(2Q37.3) WILD-TYPE" "DEL PEAK  3(2Q37.3) WILD-TYPE" 
                   TCGA-HT-7472                    TCGA-HT-7473 
"DEL PEAK  3(2Q37.3) WILD-TYPE"   "DEL PEAK  3(2Q37.3) MUTATED" 
                   TCGA-HT-7474                    TCGA-HT-7475 
"DEL PEAK  3(2Q37.3) WILD-TYPE" "DEL PEAK  3(2Q37.3) WILD-TYPE" 
                   TCGA-HT-7476                    TCGA-HT-7478 
"DEL PEAK  3(2Q37.3) WILD-TYPE" "DEL PEAK  3(2Q37.3) WILD-TYPE" 
                   TCGA-HT-7479                    TCGA-HT-7480 
"DEL PEAK  3(2Q37.3) WILD-TYPE" "DEL PEAK  3(2Q37.3) WILD-TYPE" 
                   TCGA-HT-7481                    TCGA-HT-7482 
"DEL PEAK  3(2Q37.3) WILD-TYPE" "DEL PEAK  3(2Q37.3) WILD-TYPE" 
                   TCGA-HT-7483                    TCGA-HT-7485 
"DEL PEAK  3(2Q37.3) WILD-TYPE" "DEL PEAK  3(2Q37.3) WILD-TYPE" 
                   TCGA-HT-7601                    TCGA-HT-7602 
  "DEL PEAK  3(2Q37.3) MUTATED" "DEL PEAK  3(2Q37.3) WILD-TYPE" 
                   TCGA-HT-7603                    TCGA-HT-7604 
"DEL PEAK  3(2Q37.3) WILD-TYPE" "DEL PEAK  3(2Q37.3) WILD-TYPE" 
                   TCGA-HT-7605                    TCGA-HT-7606 
"DEL PEAK  3(2Q37.3) WILD-TYPE"   "DEL PEAK  3(2Q37.3) MUTATED" 
                   TCGA-HT-7607                    TCGA-HT-7608 
"DEL PEAK  3(2Q37.3) WILD-TYPE" "DEL PEAK  3(2Q37.3) WILD-TYPE" 
                   TCGA-HT-7609                    TCGA-HT-7610 
"DEL PEAK  3(2Q37.3) WILD-TYPE" "DEL PEAK  3(2Q37.3) WILD-TYPE" 
                   TCGA-HW-7486                    TCGA-HW-7487 
"DEL PEAK  3(2Q37.3) WILD-TYPE" "DEL PEAK  3(2Q37.3) WILD-TYPE" 
                   TCGA-HW-7489                    TCGA-HW-7490 
"DEL PEAK  3(2Q37.3) WILD-TYPE" "DEL PEAK  3(2Q37.3) WILD-TYPE" 
                   TCGA-HW-7491                    TCGA-HW-7493 
"DEL PEAK  3(2Q37.3) WILD-TYPE"   "DEL PEAK  3(2Q37.3) MUTATED" 
                   TCGA-HW-7495                    TCGA-IK-7675 
"DEL PEAK  3(2Q37.3) WILD-TYPE"   "DEL PEAK  3(2Q37.3) MUTATED" 
                   TCGA-IK-8125 
"DEL PEAK  3(2Q37.3) WILD-TYPE" 
                   TCGA-CS-4938                    TCGA-CS-4941 
"DEL PEAK  3(2Q37.3) WILD-TYPE" "DEL PEAK  3(2Q37.3) WILD-TYPE" 
                   TCGA-CS-4942                    TCGA-CS-4943 
"DEL PEAK  3(2Q37.3) WILD-TYPE"   "DEL PEAK  3(2Q37.3) MUTATED" 
                   TCGA-CS-4944                    TCGA-CS-5390 
"DEL PEAK  3(2Q37.3) WILD-TYPE" "DEL PEAK  3(2Q37.3) WILD-TYPE" 
                   TCGA-CS-5393                    TCGA-CS-5394 
"DEL PEAK  3(2Q37.3) WILD-TYPE" "DEL PEAK  3(2Q37.3) WILD-TYPE" 
                   TCGA-CS-5395                    TCGA-CS-5396 
"DEL PEAK  3(2Q37.3) WILD-TYPE" "DEL PEAK  3(2Q37.3) WILD-TYPE" 
                   TCGA-CS-5397                    TCGA-CS-6186 
  "DEL PEAK  3(2Q37.3) MUTATED" "DEL PEAK  3(2Q37.3) WILD-TYPE" 
                   TCGA-CS-6188                    TCGA-CS-6290 
"DEL PEAK  3(2Q37.3) WILD-TYPE" "DEL PEAK  3(2Q37.3) WILD-TYPE" 
                   TCGA-CS-6665                    TCGA-CS-6666 
"DEL PEAK  3(2Q37.3) WILD-TYPE"   "DEL PEAK  3(2Q37.3) MUTATED" 
                   TCGA-CS-6667                    TCGA-CS-6668 
"DEL PEAK  3(2Q37.3) WILD-TYPE" "DEL PEAK  3(2Q37.3) WILD-TYPE" 
                   TCGA-CS-6669                    TCGA-CS-6670 
"DEL PEAK  3(2Q37.3) WILD-TYPE" "DEL PEAK  3(2Q37.3) WILD-TYPE" 
                   TCGA-DB-5270                    TCGA-DB-5273 
  "DEL PEAK  3(2Q37.3) MUTATED" "DEL PEAK  3(2Q37.3) WILD-TYPE" 
                   TCGA-DB-5274                    TCGA-DB-5275 
"DEL PEAK  3(2Q37.3) WILD-TYPE" "DEL PEAK  3(2Q37.3) WILD-TYPE" 
                   TCGA-DB-5276                    TCGA-DB-5277 
"DEL PEAK  3(2Q37.3) WILD-TYPE"   "DEL PEAK  3(2Q37.3) MUTATED" 
                   TCGA-DB-5278                    TCGA-DB-5279 
"DEL PEAK  3(2Q37.3) WILD-TYPE" "DEL PEAK  3(2Q37.3) WILD-TYPE" 
                   TCGA-DB-5280                    TCGA-DB-5281 
"DEL PEAK  3(2Q37.3) WILD-TYPE"   "DEL PEAK  3(2Q37.3) MUTATED" 
                   TCGA-DH-5140                    TCGA-DH-5141 
"DEL PEAK  3(2Q37.3) WILD-TYPE" "DEL PEAK  3(2Q37.3) WILD-TYPE" 
                   TCGA-DH-5142                    TCGA-DH-5143 
  "DEL PEAK  3(2Q37.3) MUTATED" "DEL PEAK  3(2Q37.3) WILD-TYPE" 
                   TCGA-DH-5144                    TCGA-DU-5847 
"DEL PEAK  3(2Q37.3) WILD-TYPE" "DEL PEAK  3(2Q37.3) WILD-TYPE" 
                   TCGA-DU-5849                    TCGA-DU-5851 
"DEL PEAK  3(2Q37.3) WILD-TYPE" "DEL PEAK  3(2Q37.3) WILD-TYPE" 
                   TCGA-DU-5852                    TCGA-DU-5853 
"DEL PEAK  3(2Q37.3) WILD-TYPE" "DEL PEAK  3(2Q37.3) WILD-TYPE" 
                   TCGA-DU-5854                    TCGA-DU-5855 
"DEL PEAK  3(2Q37.3) WILD-TYPE"   "DEL PEAK  3(2Q37.3) MUTATED" 
                   TCGA-DU-5870                    TCGA-DU-5871 
"DEL PEAK  3(2Q37.3) WILD-TYPE" "DEL PEAK  3(2Q37.3) WILD-TYPE" 
                   TCGA-DU-5872                    TCGA-DU-5874 
"DEL PEAK  3(2Q37.3) WILD-TYPE" "DEL PEAK  3(2Q37.3) WILD-TYPE" 
                   TCGA-DU-6392                    TCGA-DU-6393 
"DEL PEAK  3(2Q37.3) WILD-TYPE" "DEL PEAK  3(2Q37.3) WILD-TYPE" 
                   TCGA-DU-6394                    TCGA-DU-6395 
"DEL PEAK  3(2Q37.3) WILD-TYPE"   "DEL PEAK  3(2Q37.3) MUTATED" 
                   TCGA-DU-6396                    TCGA-DU-6397 
  "DEL PEAK  3(2Q37.3) MUTATED" "DEL PEAK  3(2Q37.3) WILD-TYPE" 
                   TCGA-DU-6399                    TCGA-DU-6400 
"DEL PEAK  3(2Q37.3) WILD-TYPE" "DEL PEAK  3(2Q37.3) WILD-TYPE" 
                   TCGA-DU-6401                    TCGA-DU-6402 
"DEL PEAK  3(2Q37.3) WILD-TYPE" "DEL PEAK  3(2Q37.3) WILD-TYPE" 
                   TCGA-DU-6403                    TCGA-DU-6404 
"DEL PEAK  3(2Q37.3) WILD-TYPE" "DEL PEAK  3(2Q37.3) WILD-TYPE" 
                   TCGA-DU-6405                    TCGA-DU-6406 
"DEL PEAK  3(2Q37.3) WILD-TYPE" "DEL PEAK  3(2Q37.3) WILD-TYPE" 
                   TCGA-DU-6407                    TCGA-DU-6408 
  "DEL PEAK  3(2Q37.3) MUTATED"   "DEL PEAK  3(2Q37.3) MUTATED" 
                   TCGA-DU-6410                    TCGA-DU-6542 
"DEL PEAK  3(2Q37.3) WILD-TYPE"   "DEL PEAK  3(2Q37.3) MUTATED" 
                   TCGA-DU-7006                    TCGA-DU-7007 
"DEL PEAK  3(2Q37.3) WILD-TYPE"   "DEL PEAK  3(2Q37.3) MUTATED" 
                   TCGA-DU-7008                    TCGA-DU-7009 
  "DEL PEAK  3(2Q37.3) MUTATED" "DEL PEAK  3(2Q37.3) WILD-TYPE" 
                   TCGA-DU-7010                    TCGA-DU-7011 
"DEL PEAK  3(2Q37.3) WILD-TYPE" "DEL PEAK  3(2Q37.3) WILD-TYPE" 
                   TCGA-DU-7012                    TCGA-DU-7013 
"DEL PEAK  3(2Q37.3) WILD-TYPE" "DEL PEAK  3(2Q37.3) WILD-TYPE" 
                   TCGA-DU-7014                    TCGA-DU-7015 
  "DEL PEAK  3(2Q37.3) MUTATED" "DEL PEAK  3(2Q37.3) WILD-TYPE" 
                   TCGA-DU-7018                    TCGA-DU-7019 
"DEL PEAK  3(2Q37.3) WILD-TYPE" "DEL PEAK  3(2Q37.3) WILD-TYPE" 
                   TCGA-DU-7290                    TCGA-DU-7292 
"DEL PEAK  3(2Q37.3) WILD-TYPE" "DEL PEAK  3(2Q37.3) WILD-TYPE" 
                   TCGA-DU-7294                    TCGA-DU-7298 
"DEL PEAK  3(2Q37.3) WILD-TYPE" "DEL PEAK  3(2Q37.3) WILD-TYPE" 
                   TCGA-DU-7299                    TCGA-DU-7300 
"DEL PEAK  3(2Q37.3) WILD-TYPE" "DEL PEAK  3(2Q37.3) WILD-TYPE" 
                   TCGA-DU-7301                    TCGA-DU-7302 
"DEL PEAK  3(2Q37.3) WILD-TYPE" "DEL PEAK  3(2Q37.3) WILD-TYPE" 
                   TCGA-DU-7304                    TCGA-DU-7306 
  "DEL PEAK  3(2Q37.3) MUTATED"   "DEL PEAK  3(2Q37.3) MUTATED" 
                   TCGA-DU-7309                    TCGA-E1-5302 
"DEL PEAK  3(2Q37.3) WILD-TYPE" "DEL PEAK  3(2Q37.3) WILD-TYPE" 
                   TCGA-E1-5303                    TCGA-E1-5304 
"DEL PEAK  3(2Q37.3) WILD-TYPE"   "DEL PEAK  3(2Q37.3) MUTATED" 
                   TCGA-E1-5305                    TCGA-E1-5307 
"DEL PEAK  3(2Q37.3) WILD-TYPE" "DEL PEAK  3(2Q37.3) WILD-TYPE" 
                   TCGA-E1-5311                    TCGA-E1-5318 
  "DEL PEAK  3(2Q37.3) MUTATED" "DEL PEAK  3(2Q37.3) WILD-TYPE" 
                   TCGA-E1-5319                    TCGA-E1-5322 
"DEL PEAK  3(2Q37.3) WILD-TYPE" "DEL PEAK  3(2Q37.3) WILD-TYPE" 
                   TCGA-EZ-7264                    TCGA-FG-5962 
"DEL PEAK  3(2Q37.3) WILD-TYPE" "DEL PEAK  3(2Q37.3) WILD-TYPE" 
                   TCGA-FG-5963                    TCGA-FG-5964 
"DEL PEAK  3(2Q37.3) WILD-TYPE" "DEL PEAK  3(2Q37.3) WILD-TYPE" 
                   TCGA-FG-5965                    TCGA-FG-6688 
"DEL PEAK  3(2Q37.3) WILD-TYPE" "DEL PEAK  3(2Q37.3) WILD-TYPE" 
                   TCGA-FG-6689                    TCGA-FG-6690 
"DEL PEAK  3(2Q37.3) WILD-TYPE" "DEL PEAK  3(2Q37.3) WILD-TYPE" 
                   TCGA-FG-6691                    TCGA-FG-6692 
"DEL PEAK  3(2Q37.3) WILD-TYPE" "DEL PEAK  3(2Q37.3) WILD-TYPE" 
                   TCGA-FG-7634                    TCGA-FG-7636 
"DEL PEAK  3(2Q37.3) WILD-TYPE" "DEL PEAK  3(2Q37.3) WILD-TYPE" 
                   TCGA-FG-7638                    TCGA-FG-7643 
"DEL PEAK  3(2Q37.3) WILD-TYPE" "DEL PEAK  3(2Q37.3) WILD-TYPE" 
                   TCGA-FN-7833                    TCGA-HT-7467 
"DEL PEAK  3(2Q37.3) WILD-TYPE" "DEL PEAK  3(2Q37.3) WILD-TYPE" 
                   TCGA-HT-7468                    TCGA-HT-7470 
"DEL PEAK  3(2Q37.3) WILD-TYPE" "DEL PEAK  3(2Q37.3) WILD-TYPE" 
                   TCGA-HT-7472                    TCGA-HT-7473 
"DEL PEAK  3(2Q37.3) WILD-TYPE"   "DEL PEAK  3(2Q37.3) MUTATED" 
                   TCGA-HT-7474                    TCGA-HT-7475 
"DEL PEAK  3(2Q37.3) WILD-TYPE" "DEL PEAK  3(2Q37.3) WILD-TYPE" 
                   TCGA-HT-7476                    TCGA-HT-7478 
"DEL PEAK  3(2Q37.3) WILD-TYPE" "DEL PEAK  3(2Q37.3) WILD-TYPE" 
                   TCGA-HT-7479                    TCGA-HT-7480 
"DEL PEAK  3(2Q37.3) WILD-TYPE" "DEL PEAK  3(2Q37.3) WILD-TYPE" 
                   TCGA-HT-7481                    TCGA-HT-7482 
"DEL PEAK  3(2Q37.3) WILD-TYPE" "DEL PEAK  3(2Q37.3) WILD-TYPE" 
                   TCGA-HT-7483                    TCGA-HT-7485 
"DEL PEAK  3(2Q37.3) WILD-TYPE" "DEL PEAK  3(2Q37.3) WILD-TYPE" 
                   TCGA-HT-7601                    TCGA-HT-7602 
  "DEL PEAK  3(2Q37.3) MUTATED" "DEL PEAK  3(2Q37.3) WILD-TYPE" 
                   TCGA-HT-7603                    TCGA-HT-7604 
"DEL PEAK  3(2Q37.3) WILD-TYPE" "DEL PEAK  3(2Q37.3) WILD-TYPE" 
                   TCGA-HT-7605                    TCGA-HT-7606 
"DEL PEAK  3(2Q37.3) WILD-TYPE"   "DEL PEAK  3(2Q37.3) MUTATED" 
                   TCGA-HT-7607                    TCGA-HT-7608 
"DEL PEAK  3(2Q37.3) WILD-TYPE" "DEL PEAK  3(2Q37.3) WILD-TYPE" 
                   TCGA-HT-7609                    TCGA-HT-7610 
"DEL PEAK  3(2Q37.3) WILD-TYPE" "DEL PEAK  3(2Q37.3) WILD-TYPE" 
                   TCGA-HW-7486                    TCGA-HW-7487 
"DEL PEAK  3(2Q37.3) WILD-TYPE" "DEL PEAK  3(2Q37.3) WILD-TYPE" 
                   TCGA-HW-7489                    TCGA-HW-7490 
"DEL PEAK  3(2Q37.3) WILD-TYPE" "DEL PEAK  3(2Q37.3) WILD-TYPE" 
                   TCGA-HW-7491                    TCGA-HW-7493 
"DEL PEAK  3(2Q37.3) WILD-TYPE"   "DEL PEAK  3(2Q37.3) MUTATED" 
                   TCGA-HW-7495                    TCGA-IK-7675 
"DEL PEAK  3(2Q37.3) WILD-TYPE"   "DEL PEAK  3(2Q37.3) MUTATED" 
                   TCGA-IK-8125 
"DEL PEAK  3(2Q37.3) WILD-TYPE" 
                   TCGA-CS-4938                    TCGA-CS-4941 
"DEL PEAK  3(2Q37.3) WILD-TYPE" "DEL PEAK  3(2Q37.3) WILD-TYPE" 
                   TCGA-CS-4942                    TCGA-CS-4943 
"DEL PEAK  3(2Q37.3) WILD-TYPE"   "DEL PEAK  3(2Q37.3) MUTATED" 
                   TCGA-CS-4944                    TCGA-CS-5390 
"DEL PEAK  3(2Q37.3) WILD-TYPE" "DEL PEAK  3(2Q37.3) WILD-TYPE" 
                   TCGA-CS-5393                    TCGA-CS-5394 
"DEL PEAK  3(2Q37.3) WILD-TYPE" "DEL PEAK  3(2Q37.3) WILD-TYPE" 
                   TCGA-CS-5395                    TCGA-CS-5396 
"DEL PEAK  3(2Q37.3) WILD-TYPE" "DEL PEAK  3(2Q37.3) WILD-TYPE" 
                   TCGA-CS-5397                    TCGA-CS-6186 
  "DEL PEAK  3(2Q37.3) MUTATED" "DEL PEAK  3(2Q37.3) WILD-TYPE" 
                   TCGA-CS-6188                    TCGA-CS-6290 
"DEL PEAK  3(2Q37.3) WILD-TYPE" "DEL PEAK  3(2Q37.3) WILD-TYPE" 
                   TCGA-CS-6665                    TCGA-CS-6666 
"DEL PEAK  3(2Q37.3) WILD-TYPE"   "DEL PEAK  3(2Q37.3) MUTATED" 
                   TCGA-CS-6667                    TCGA-CS-6668 
"DEL PEAK  3(2Q37.3) WILD-TYPE" "DEL PEAK  3(2Q37.3) WILD-TYPE" 
                   TCGA-CS-6669                    TCGA-CS-6670 
"DEL PEAK  3(2Q37.3) WILD-TYPE" "DEL PEAK  3(2Q37.3) WILD-TYPE" 
                   TCGA-DB-5270                    TCGA-DB-5273 
  "DEL PEAK  3(2Q37.3) MUTATED" "DEL PEAK  3(2Q37.3) WILD-TYPE" 
                   TCGA-DB-5274                    TCGA-DB-5275 
"DEL PEAK  3(2Q37.3) WILD-TYPE" "DEL PEAK  3(2Q37.3) WILD-TYPE" 
                   TCGA-DB-5276                    TCGA-DB-5277 
"DEL PEAK  3(2Q37.3) WILD-TYPE"   "DEL PEAK  3(2Q37.3) MUTATED" 
                   TCGA-DB-5278                    TCGA-DB-5279 
"DEL PEAK  3(2Q37.3) WILD-TYPE" "DEL PEAK  3(2Q37.3) WILD-TYPE" 
                   TCGA-DB-5280                    TCGA-DB-5281 
"DEL PEAK  3(2Q37.3) WILD-TYPE"   "DEL PEAK  3(2Q37.3) MUTATED" 
                   TCGA-DH-5140                    TCGA-DH-5141 
"DEL PEAK  3(2Q37.3) WILD-TYPE" "DEL PEAK  3(2Q37.3) WILD-TYPE" 
                   TCGA-DH-5142                    TCGA-DH-5143 
  "DEL PEAK  3(2Q37.3) MUTATED" "DEL PEAK  3(2Q37.3) WILD-TYPE" 
                   TCGA-DH-5144                    TCGA-DU-5847 
"DEL PEAK  3(2Q37.3) WILD-TYPE" "DEL PEAK  3(2Q37.3) WILD-TYPE" 
                   TCGA-DU-5849                    TCGA-DU-5851 
"DEL PEAK  3(2Q37.3) WILD-TYPE" "DEL PEAK  3(2Q37.3) WILD-TYPE" 
                   TCGA-DU-5852                    TCGA-DU-5853 
"DEL PEAK  3(2Q37.3) WILD-TYPE" "DEL PEAK  3(2Q37.3) WILD-TYPE" 
                   TCGA-DU-5854                    TCGA-DU-5855 
"DEL PEAK  3(2Q37.3) WILD-TYPE"   "DEL PEAK  3(2Q37.3) MUTATED" 
                   TCGA-DU-5870                    TCGA-DU-5871 
"DEL PEAK  3(2Q37.3) WILD-TYPE" "DEL PEAK  3(2Q37.3) WILD-TYPE" 
                   TCGA-DU-5872                    TCGA-DU-5874 
"DEL PEAK  3(2Q37.3) WILD-TYPE" "DEL PEAK  3(2Q37.3) WILD-TYPE" 
                   TCGA-DU-6392                    TCGA-DU-6393 
"DEL PEAK  3(2Q37.3) WILD-TYPE" "DEL PEAK  3(2Q37.3) WILD-TYPE" 
                   TCGA-DU-6394                    TCGA-DU-6395 
"DEL PEAK  3(2Q37.3) WILD-TYPE"   "DEL PEAK  3(2Q37.3) MUTATED" 
                   TCGA-DU-6396                    TCGA-DU-6397 
  "DEL PEAK  3(2Q37.3) MUTATED" "DEL PEAK  3(2Q37.3) WILD-TYPE" 
                   TCGA-DU-6399                    TCGA-DU-6400 
"DEL PEAK  3(2Q37.3) WILD-TYPE" "DEL PEAK  3(2Q37.3) WILD-TYPE" 
                   TCGA-DU-6401                    TCGA-DU-6402 
"DEL PEAK  3(2Q37.3) WILD-TYPE" "DEL PEAK  3(2Q37.3) WILD-TYPE" 
                   TCGA-DU-6403                    TCGA-DU-6404 
"DEL PEAK  3(2Q37.3) WILD-TYPE" "DEL PEAK  3(2Q37.3) WILD-TYPE" 
                   TCGA-DU-6405                    TCGA-DU-6406 
"DEL PEAK  3(2Q37.3) WILD-TYPE" "DEL PEAK  3(2Q37.3) WILD-TYPE" 
                   TCGA-DU-6407                    TCGA-DU-6408 
  "DEL PEAK  3(2Q37.3) MUTATED"   "DEL PEAK  3(2Q37.3) MUTATED" 
                   TCGA-DU-6410                    TCGA-DU-6542 
"DEL PEAK  3(2Q37.3) WILD-TYPE"   "DEL PEAK  3(2Q37.3) MUTATED" 
                   TCGA-DU-7006                    TCGA-DU-7007 
"DEL PEAK  3(2Q37.3) WILD-TYPE"   "DEL PEAK  3(2Q37.3) MUTATED" 
                   TCGA-DU-7008                    TCGA-DU-7009 
  "DEL PEAK  3(2Q37.3) MUTATED" "DEL PEAK  3(2Q37.3) WILD-TYPE" 
                   TCGA-DU-7010                    TCGA-DU-7011 
"DEL PEAK  3(2Q37.3) WILD-TYPE" "DEL PEAK  3(2Q37.3) WILD-TYPE" 
                   TCGA-DU-7012                    TCGA-DU-7013 
"DEL PEAK  3(2Q37.3) WILD-TYPE" "DEL PEAK  3(2Q37.3) WILD-TYPE" 
                   TCGA-DU-7014                    TCGA-DU-7015 
  "DEL PEAK  3(2Q37.3) MUTATED" "DEL PEAK  3(2Q37.3) WILD-TYPE" 
                   TCGA-DU-7018                    TCGA-DU-7019 
"DEL PEAK  3(2Q37.3) WILD-TYPE" "DEL PEAK  3(2Q37.3) WILD-TYPE" 
                   TCGA-DU-7290                    TCGA-DU-7292 
"DEL PEAK  3(2Q37.3) WILD-TYPE" "DEL PEAK  3(2Q37.3) WILD-TYPE" 
                   TCGA-DU-7294                    TCGA-DU-7298 
"DEL PEAK  3(2Q37.3) WILD-TYPE" "DEL PEAK  3(2Q37.3) WILD-TYPE" 
                   TCGA-DU-7299                    TCGA-DU-7300 
"DEL PEAK  3(2Q37.3) WILD-TYPE" "DEL PEAK  3(2Q37.3) WILD-TYPE" 
                   TCGA-DU-7301                    TCGA-DU-7302 
"DEL PEAK  3(2Q37.3) WILD-TYPE" "DEL PEAK  3(2Q37.3) WILD-TYPE" 
                   TCGA-DU-7304                    TCGA-DU-7306 
  "DEL PEAK  3(2Q37.3) MUTATED"   "DEL PEAK  3(2Q37.3) MUTATED" 
                   TCGA-DU-7309                    TCGA-E1-5302 
"DEL PEAK  3(2Q37.3) WILD-TYPE" "DEL PEAK  3(2Q37.3) WILD-TYPE" 
                   TCGA-E1-5303                    TCGA-E1-5304 
"DEL PEAK  3(2Q37.3) WILD-TYPE"   "DEL PEAK  3(2Q37.3) MUTATED" 
                   TCGA-E1-5305                    TCGA-E1-5307 
"DEL PEAK  3(2Q37.3) WILD-TYPE" "DEL PEAK  3(2Q37.3) WILD-TYPE" 
                   TCGA-E1-5311                    TCGA-E1-5318 
  "DEL PEAK  3(2Q37.3) MUTATED" "DEL PEAK  3(2Q37.3) WILD-TYPE" 
                   TCGA-E1-5319                    TCGA-E1-5322 
"DEL PEAK  3(2Q37.3) WILD-TYPE" "DEL PEAK  3(2Q37.3) WILD-TYPE" 
                   TCGA-EZ-7264                    TCGA-FG-5962 
"DEL PEAK  3(2Q37.3) WILD-TYPE" "DEL PEAK  3(2Q37.3) WILD-TYPE" 
                   TCGA-FG-5963                    TCGA-FG-5964 
"DEL PEAK  3(2Q37.3) WILD-TYPE" "DEL PEAK  3(2Q37.3) WILD-TYPE" 
                   TCGA-FG-5965                    TCGA-FG-6688 
"DEL PEAK  3(2Q37.3) WILD-TYPE" "DEL PEAK  3(2Q37.3) WILD-TYPE" 
                   TCGA-FG-6689                    TCGA-FG-6690 
"DEL PEAK  3(2Q37.3) WILD-TYPE" "DEL PEAK  3(2Q37.3) WILD-TYPE" 
                   TCGA-FG-6691                    TCGA-FG-6692 
"DEL PEAK  3(2Q37.3) WILD-TYPE" "DEL PEAK  3(2Q37.3) WILD-TYPE" 
                   TCGA-FG-7634                    TCGA-FG-7636 
"DEL PEAK  3(2Q37.3) WILD-TYPE" "DEL PEAK  3(2Q37.3) WILD-TYPE" 
                   TCGA-FG-7638                    TCGA-FG-7643 
"DEL PEAK  3(2Q37.3) WILD-TYPE" "DEL PEAK  3(2Q37.3) WILD-TYPE" 
                   TCGA-FN-7833                    TCGA-HT-7467 
"DEL PEAK  3(2Q37.3) WILD-TYPE" "DEL PEAK  3(2Q37.3) WILD-TYPE" 
                   TCGA-HT-7468                    TCGA-HT-7470 
"DEL PEAK  3(2Q37.3) WILD-TYPE" "DEL PEAK  3(2Q37.3) WILD-TYPE" 
                   TCGA-HT-7472                    TCGA-HT-7473 
"DEL PEAK  3(2Q37.3) WILD-TYPE"   "DEL PEAK  3(2Q37.3) MUTATED" 
                   TCGA-HT-7474                    TCGA-HT-7475 
"DEL PEAK  3(2Q37.3) WILD-TYPE" "DEL PEAK  3(2Q37.3) WILD-TYPE" 
                   TCGA-HT-7476                    TCGA-HT-7478 
"DEL PEAK  3(2Q37.3) WILD-TYPE" "DEL PEAK  3(2Q37.3) WILD-TYPE" 
                   TCGA-HT-7479                    TCGA-HT-7480 
"DEL PEAK  3(2Q37.3) WILD-TYPE" "DEL PEAK  3(2Q37.3) WILD-TYPE" 
                   TCGA-HT-7481                    TCGA-HT-7482 
"DEL PEAK  3(2Q37.3) WILD-TYPE" "DEL PEAK  3(2Q37.3) WILD-TYPE" 
                   TCGA-HT-7483                    TCGA-HT-7485 
"DEL PEAK  3(2Q37.3) WILD-TYPE" "DEL PEAK  3(2Q37.3) WILD-TYPE" 
                   TCGA-HT-7601                    TCGA-HT-7602 
  "DEL PEAK  3(2Q37.3) MUTATED" "DEL PEAK  3(2Q37.3) WILD-TYPE" 
                   TCGA-HT-7603                    TCGA-HT-7604 
"DEL PEAK  3(2Q37.3) WILD-TYPE" "DEL PEAK  3(2Q37.3) WILD-TYPE" 
                   TCGA-HT-7605                    TCGA-HT-7606 
"DEL PEAK  3(2Q37.3) WILD-TYPE"   "DEL PEAK  3(2Q37.3) MUTATED" 
                   TCGA-HT-7607                    TCGA-HT-7608 
"DEL PEAK  3(2Q37.3) WILD-TYPE" "DEL PEAK  3(2Q37.3) WILD-TYPE" 
                   TCGA-HT-7609                    TCGA-HT-7610 
"DEL PEAK  3(2Q37.3) WILD-TYPE" "DEL PEAK  3(2Q37.3) WILD-TYPE" 
                   TCGA-HW-7486                    TCGA-HW-7487 
"DEL PEAK  3(2Q37.3) WILD-TYPE" "DEL PEAK  3(2Q37.3) WILD-TYPE" 
                   TCGA-HW-7489                    TCGA-HW-7490 
"DEL PEAK  3(2Q37.3) WILD-TYPE" "DEL PEAK  3(2Q37.3) WILD-TYPE" 
                   TCGA-HW-7491                    TCGA-HW-7493 
"DEL PEAK  3(2Q37.3) WILD-TYPE"   "DEL PEAK  3(2Q37.3) MUTATED" 
                   TCGA-HW-7495                    TCGA-IK-7675 
"DEL PEAK  3(2Q37.3) WILD-TYPE"   "DEL PEAK  3(2Q37.3) MUTATED" 
                   TCGA-IK-8125 
"DEL PEAK  3(2Q37.3) WILD-TYPE" 
[1] "hr=" "1.2"
D17V2, continuous
D17V3, binary
[1] "tbl2"
                               cls
clus                            [,1] [,2]
  DEL PEAK  3(2Q37.3) MUTATED     10   15
  DEL PEAK  3(2Q37.3) WILD-TYPE   52   68
        clus
vv       DEL PEAK  3(2Q37.3) MUTATED DEL PEAK  3(2Q37.3) WILD-TYPE
  FEMALE                          10                            52
  MALE                            15                            68
D17V4, continuous
D17V5, multiclass
                   clus
vv                  DEL PEAK  3(2Q37.3) MUTATED DEL PEAK  3(2Q37.3) WILD-TYPE
  ASTROCYTOMA                                10                            40
  OLIGOASTROCYTOMA                            7                            29
  OLIGODENDROGLIOMA                           7                            51
D17V6, binary
[1] "tbl2"
                               cls
clus                            [,1] [,2]
  DEL PEAK  3(2Q37.3) MUTATED      9   16
  DEL PEAK  3(2Q37.3) WILD-TYPE   50   70
     clus
vv    DEL PEAK  3(2Q37.3) MUTATED DEL PEAK  3(2Q37.3) WILD-TYPE
  NO                           16                            70
  YES                           9                            50
D17V7, binary
[1] "tbl2"
                               cls
clus                            [,1] [,2]
  DEL PEAK  3(2Q37.3) MUTATED     11   14
  DEL PEAK  3(2Q37.3) WILD-TYPE   63   57
     clus
vv    DEL PEAK  3(2Q37.3) MUTATED DEL PEAK  3(2Q37.3) WILD-TYPE
  NO                           14                            57
  YES                          11                            63

Clustering(18) Variable = Del Peak  4(3p21.1) mutation analysis
D18V1, survival
                   TCGA-CS-4938                    TCGA-CS-4941 
"DEL PEAK  4(3P21.1) WILD-TYPE" "DEL PEAK  4(3P21.1) WILD-TYPE" 
                   TCGA-CS-4942                    TCGA-CS-4943 
"DEL PEAK  4(3P21.1) WILD-TYPE" "DEL PEAK  4(3P21.1) WILD-TYPE" 
                   TCGA-CS-4944                    TCGA-CS-5390 
"DEL PEAK  4(3P21.1) WILD-TYPE" "DEL PEAK  4(3P21.1) WILD-TYPE" 
                   TCGA-CS-5393                    TCGA-CS-5394 
"DEL PEAK  4(3P21.1) WILD-TYPE" "DEL PEAK  4(3P21.1) WILD-TYPE" 
                   TCGA-CS-5395                    TCGA-CS-5396 
"DEL PEAK  4(3P21.1) WILD-TYPE" "DEL PEAK  4(3P21.1) WILD-TYPE" 
                   TCGA-CS-5397                    TCGA-CS-6186 
"DEL PEAK  4(3P21.1) WILD-TYPE" "DEL PEAK  4(3P21.1) WILD-TYPE" 
                   TCGA-CS-6188                    TCGA-CS-6290 
"DEL PEAK  4(3P21.1) WILD-TYPE" "DEL PEAK  4(3P21.1) WILD-TYPE" 
                   TCGA-CS-6665                    TCGA-CS-6666 
"DEL PEAK  4(3P21.1) WILD-TYPE"   "DEL PEAK  4(3P21.1) MUTATED" 
                   TCGA-CS-6667                    TCGA-CS-6668 
"DEL PEAK  4(3P21.1) WILD-TYPE" "DEL PEAK  4(3P21.1) WILD-TYPE" 
                   TCGA-CS-6669                    TCGA-CS-6670 
"DEL PEAK  4(3P21.1) WILD-TYPE" "DEL PEAK  4(3P21.1) WILD-TYPE" 
                   TCGA-DB-5270                    TCGA-DB-5273 
"DEL PEAK  4(3P21.1) WILD-TYPE" "DEL PEAK  4(3P21.1) WILD-TYPE" 
                   TCGA-DB-5274                    TCGA-DB-5275 
"DEL PEAK  4(3P21.1) WILD-TYPE"   "DEL PEAK  4(3P21.1) MUTATED" 
                   TCGA-DB-5276                    TCGA-DB-5277 
"DEL PEAK  4(3P21.1) WILD-TYPE"   "DEL PEAK  4(3P21.1) MUTATED" 
                   TCGA-DB-5278                    TCGA-DB-5279 
"DEL PEAK  4(3P21.1) WILD-TYPE" "DEL PEAK  4(3P21.1) WILD-TYPE" 
                   TCGA-DB-5280                    TCGA-DB-5281 
"DEL PEAK  4(3P21.1) WILD-TYPE" "DEL PEAK  4(3P21.1) WILD-TYPE" 
                   TCGA-DH-5140                    TCGA-DH-5141 
"DEL PEAK  4(3P21.1) WILD-TYPE" "DEL PEAK  4(3P21.1) WILD-TYPE" 
                   TCGA-DH-5142                    TCGA-DH-5143 
"DEL PEAK  4(3P21.1) WILD-TYPE" "DEL PEAK  4(3P21.1) WILD-TYPE" 
                   TCGA-DH-5144                    TCGA-DU-5847 
"DEL PEAK  4(3P21.1) WILD-TYPE" "DEL PEAK  4(3P21.1) WILD-TYPE" 
                   TCGA-DU-5849                    TCGA-DU-5851 
"DEL PEAK  4(3P21.1) WILD-TYPE" "DEL PEAK  4(3P21.1) WILD-TYPE" 
                   TCGA-DU-5852                    TCGA-DU-5853 
"DEL PEAK  4(3P21.1) WILD-TYPE" "DEL PEAK  4(3P21.1) WILD-TYPE" 
                   TCGA-DU-5854                    TCGA-DU-5855 
"DEL PEAK  4(3P21.1) WILD-TYPE" "DEL PEAK  4(3P21.1) WILD-TYPE" 
                   TCGA-DU-5870                    TCGA-DU-5871 
"DEL PEAK  4(3P21.1) WILD-TYPE" "DEL PEAK  4(3P21.1) WILD-TYPE" 
                   TCGA-DU-5872                    TCGA-DU-5874 
"DEL PEAK  4(3P21.1) WILD-TYPE" "DEL PEAK  4(3P21.1) WILD-TYPE" 
                   TCGA-DU-6392                    TCGA-DU-6393 
"DEL PEAK  4(3P21.1) WILD-TYPE" "DEL PEAK  4(3P21.1) WILD-TYPE" 
                   TCGA-DU-6394                    TCGA-DU-6395 
"DEL PEAK  4(3P21.1) WILD-TYPE" "DEL PEAK  4(3P21.1) WILD-TYPE" 
                   TCGA-DU-6396                    TCGA-DU-6397 
  "DEL PEAK  4(3P21.1) MUTATED" "DEL PEAK  4(3P21.1) WILD-TYPE" 
                   TCGA-DU-6399                    TCGA-DU-6400 
"DEL PEAK  4(3P21.1) WILD-TYPE" "DEL PEAK  4(3P21.1) WILD-TYPE" 
                   TCGA-DU-6401                    TCGA-DU-6402 
"DEL PEAK  4(3P21.1) WILD-TYPE"   "DEL PEAK  4(3P21.1) MUTATED" 
                   TCGA-DU-6403                    TCGA-DU-6404 
"DEL PEAK  4(3P21.1) WILD-TYPE" "DEL PEAK  4(3P21.1) WILD-TYPE" 
                   TCGA-DU-6405                    TCGA-DU-6406 
"DEL PEAK  4(3P21.1) WILD-TYPE" "DEL PEAK  4(3P21.1) WILD-TYPE" 
                   TCGA-DU-6407                    TCGA-DU-6408 
"DEL PEAK  4(3P21.1) WILD-TYPE" "DEL PEAK  4(3P21.1) WILD-TYPE" 
                   TCGA-DU-6410                    TCGA-DU-6542 
"DEL PEAK  4(3P21.1) WILD-TYPE"   "DEL PEAK  4(3P21.1) MUTATED" 
                   TCGA-DU-7006                    TCGA-DU-7007 
"DEL PEAK  4(3P21.1) WILD-TYPE" "DEL PEAK  4(3P21.1) WILD-TYPE" 
                   TCGA-DU-7008                    TCGA-DU-7009 
"DEL PEAK  4(3P21.1) WILD-TYPE" "DEL PEAK  4(3P21.1) WILD-TYPE" 
                   TCGA-DU-7010                    TCGA-DU-7011 
  "DEL PEAK  4(3P21.1) MUTATED" "DEL PEAK  4(3P21.1) WILD-TYPE" 
                   TCGA-DU-7012                    TCGA-DU-7013 
"DEL PEAK  4(3P21.1) WILD-TYPE" "DEL PEAK  4(3P21.1) WILD-TYPE" 
                   TCGA-DU-7014                    TCGA-DU-7015 
"DEL PEAK  4(3P21.1) WILD-TYPE" "DEL PEAK  4(3P21.1) WILD-TYPE" 
                   TCGA-DU-7018                    TCGA-DU-7019 
"DEL PEAK  4(3P21.1) WILD-TYPE" "DEL PEAK  4(3P21.1) WILD-TYPE" 
                   TCGA-DU-7290                    TCGA-DU-7292 
"DEL PEAK  4(3P21.1) WILD-TYPE" "DEL PEAK  4(3P21.1) WILD-TYPE" 
                   TCGA-DU-7294                    TCGA-DU-7298 
"DEL PEAK  4(3P21.1) WILD-TYPE" "DEL PEAK  4(3P21.1) WILD-TYPE" 
                   TCGA-DU-7299                    TCGA-DU-7300 
"DEL PEAK  4(3P21.1) WILD-TYPE"   "DEL PEAK  4(3P21.1) MUTATED" 
                   TCGA-DU-7301                    TCGA-DU-7302 
"DEL PEAK  4(3P21.1) WILD-TYPE" "DEL PEAK  4(3P21.1) WILD-TYPE" 
                   TCGA-DU-7304                    TCGA-DU-7306 
"DEL PEAK  4(3P21.1) WILD-TYPE" "DEL PEAK  4(3P21.1) WILD-TYPE" 
                   TCGA-DU-7309                    TCGA-E1-5302 
"DEL PEAK  4(3P21.1) WILD-TYPE" "DEL PEAK  4(3P21.1) WILD-TYPE" 
                   TCGA-E1-5303                    TCGA-E1-5304 
"DEL PEAK  4(3P21.1) WILD-TYPE"   "DEL PEAK  4(3P21.1) MUTATED" 
                   TCGA-E1-5305                    TCGA-E1-5307 
"DEL PEAK  4(3P21.1) WILD-TYPE" "DEL PEAK  4(3P21.1) WILD-TYPE" 
                   TCGA-E1-5311                    TCGA-E1-5318 
"DEL PEAK  4(3P21.1) WILD-TYPE" "DEL PEAK  4(3P21.1) WILD-TYPE" 
                   TCGA-E1-5319                    TCGA-E1-5322 
"DEL PEAK  4(3P21.1) WILD-TYPE"   "DEL PEAK  4(3P21.1) MUTATED" 
                   TCGA-EZ-7264                    TCGA-FG-5962 
"DEL PEAK  4(3P21.1) WILD-TYPE" "DEL PEAK  4(3P21.1) WILD-TYPE" 
                   TCGA-FG-5963                    TCGA-FG-5964 
"DEL PEAK  4(3P21.1) WILD-TYPE" "DEL PEAK  4(3P21.1) WILD-TYPE" 
                   TCGA-FG-5965                    TCGA-FG-6688 
"DEL PEAK  4(3P21.1) WILD-TYPE" "DEL PEAK  4(3P21.1) WILD-TYPE" 
                   TCGA-FG-6689                    TCGA-FG-6690 
"DEL PEAK  4(3P21.1) WILD-TYPE" "DEL PEAK  4(3P21.1) WILD-TYPE" 
                   TCGA-FG-6691                    TCGA-FG-6692 
"DEL PEAK  4(3P21.1) WILD-TYPE" "DEL PEAK  4(3P21.1) WILD-TYPE" 
                   TCGA-FG-7634                    TCGA-FG-7636 
"DEL PEAK  4(3P21.1) WILD-TYPE" "DEL PEAK  4(3P21.1) WILD-TYPE" 
                   TCGA-FG-7638                    TCGA-FG-7643 
"DEL PEAK  4(3P21.1) WILD-TYPE" "DEL PEAK  4(3P21.1) WILD-TYPE" 
                   TCGA-FN-7833                    TCGA-HT-7467 
"DEL PEAK  4(3P21.1) WILD-TYPE" "DEL PEAK  4(3P21.1) WILD-TYPE" 
                   TCGA-HT-7468                    TCGA-HT-7470 
"DEL PEAK  4(3P21.1) WILD-TYPE" "DEL PEAK  4(3P21.1) WILD-TYPE" 
                   TCGA-HT-7472                    TCGA-HT-7473 
"DEL PEAK  4(3P21.1) WILD-TYPE"   "DEL PEAK  4(3P21.1) MUTATED" 
                   TCGA-HT-7474                    TCGA-HT-7475 
"DEL PEAK  4(3P21.1) WILD-TYPE" "DEL PEAK  4(3P21.1) WILD-TYPE" 
                   TCGA-HT-7476                    TCGA-HT-7478 
"DEL PEAK  4(3P21.1) WILD-TYPE"   "DEL PEAK  4(3P21.1) MUTATED" 
                   TCGA-HT-7479                    TCGA-HT-7480 
"DEL PEAK  4(3P21.1) WILD-TYPE" "DEL PEAK  4(3P21.1) WILD-TYPE" 
                   TCGA-HT-7481                    TCGA-HT-7482 
"DEL PEAK  4(3P21.1) WILD-TYPE"   "DEL PEAK  4(3P21.1) MUTATED" 
                   TCGA-HT-7483                    TCGA-HT-7485 
"DEL PEAK  4(3P21.1) WILD-TYPE" "DEL PEAK  4(3P21.1) WILD-TYPE" 
                   TCGA-HT-7601                    TCGA-HT-7602 
"DEL PEAK  4(3P21.1) WILD-TYPE" "DEL PEAK  4(3P21.1) WILD-TYPE" 
                   TCGA-HT-7603                    TCGA-HT-7604 
"DEL PEAK  4(3P21.1) WILD-TYPE" "DEL PEAK  4(3P21.1) WILD-TYPE" 
                   TCGA-HT-7605                    TCGA-HT-7606 
"DEL PEAK  4(3P21.1) WILD-TYPE"   "DEL PEAK  4(3P21.1) MUTATED" 
                   TCGA-HT-7607                    TCGA-HT-7608 
"DEL PEAK  4(3P21.1) WILD-TYPE" "DEL PEAK  4(3P21.1) WILD-TYPE" 
                   TCGA-HT-7609                    TCGA-HT-7610 
"DEL PEAK  4(3P21.1) WILD-TYPE" "DEL PEAK  4(3P21.1) WILD-TYPE" 
                   TCGA-HW-7486                    TCGA-HW-7487 
"DEL PEAK  4(3P21.1) WILD-TYPE" "DEL PEAK  4(3P21.1) WILD-TYPE" 
                   TCGA-HW-7489                    TCGA-HW-7490 
"DEL PEAK  4(3P21.1) WILD-TYPE" "DEL PEAK  4(3P21.1) WILD-TYPE" 
                   TCGA-HW-7491                    TCGA-HW-7493 
"DEL PEAK  4(3P21.1) WILD-TYPE" "DEL PEAK  4(3P21.1) WILD-TYPE" 
                   TCGA-HW-7495                    TCGA-IK-7675 
"DEL PEAK  4(3P21.1) WILD-TYPE"   "DEL PEAK  4(3P21.1) MUTATED" 
                   TCGA-IK-8125 
"DEL PEAK  4(3P21.1) WILD-TYPE" 
                   TCGA-CS-4938                    TCGA-CS-4941 
"DEL PEAK  4(3P21.1) WILD-TYPE" "DEL PEAK  4(3P21.1) WILD-TYPE" 
                   TCGA-CS-4942                    TCGA-CS-4943 
"DEL PEAK  4(3P21.1) WILD-TYPE" "DEL PEAK  4(3P21.1) WILD-TYPE" 
                   TCGA-CS-4944                    TCGA-CS-5390 
"DEL PEAK  4(3P21.1) WILD-TYPE" "DEL PEAK  4(3P21.1) WILD-TYPE" 
                   TCGA-CS-5393                    TCGA-CS-5394 
"DEL PEAK  4(3P21.1) WILD-TYPE" "DEL PEAK  4(3P21.1) WILD-TYPE" 
                   TCGA-CS-5395                    TCGA-CS-5396 
"DEL PEAK  4(3P21.1) WILD-TYPE" "DEL PEAK  4(3P21.1) WILD-TYPE" 
                   TCGA-CS-5397                    TCGA-CS-6186 
"DEL PEAK  4(3P21.1) WILD-TYPE" "DEL PEAK  4(3P21.1) WILD-TYPE" 
                   TCGA-CS-6188                    TCGA-CS-6290 
"DEL PEAK  4(3P21.1) WILD-TYPE" "DEL PEAK  4(3P21.1) WILD-TYPE" 
                   TCGA-CS-6665                    TCGA-CS-6666 
"DEL PEAK  4(3P21.1) WILD-TYPE"   "DEL PEAK  4(3P21.1) MUTATED" 
                   TCGA-CS-6667                    TCGA-CS-6668 
"DEL PEAK  4(3P21.1) WILD-TYPE" "DEL PEAK  4(3P21.1) WILD-TYPE" 
                   TCGA-CS-6669                    TCGA-CS-6670 
"DEL PEAK  4(3P21.1) WILD-TYPE" "DEL PEAK  4(3P21.1) WILD-TYPE" 
                   TCGA-DB-5270                    TCGA-DB-5273 
"DEL PEAK  4(3P21.1) WILD-TYPE" "DEL PEAK  4(3P21.1) WILD-TYPE" 
                   TCGA-DB-5274                    TCGA-DB-5275 
"DEL PEAK  4(3P21.1) WILD-TYPE"   "DEL PEAK  4(3P21.1) MUTATED" 
                   TCGA-DB-5276                    TCGA-DB-5277 
"DEL PEAK  4(3P21.1) WILD-TYPE"   "DEL PEAK  4(3P21.1) MUTATED" 
                   TCGA-DB-5278                    TCGA-DB-5279 
"DEL PEAK  4(3P21.1) WILD-TYPE" "DEL PEAK  4(3P21.1) WILD-TYPE" 
                   TCGA-DB-5280                    TCGA-DB-5281 
"DEL PEAK  4(3P21.1) WILD-TYPE" "DEL PEAK  4(3P21.1) WILD-TYPE" 
                   TCGA-DH-5140                    TCGA-DH-5141 
"DEL PEAK  4(3P21.1) WILD-TYPE" "DEL PEAK  4(3P21.1) WILD-TYPE" 
                   TCGA-DH-5142                    TCGA-DH-5143 
"DEL PEAK  4(3P21.1) WILD-TYPE" "DEL PEAK  4(3P21.1) WILD-TYPE" 
                   TCGA-DH-5144                    TCGA-DU-5847 
"DEL PEAK  4(3P21.1) WILD-TYPE" "DEL PEAK  4(3P21.1) WILD-TYPE" 
                   TCGA-DU-5849                    TCGA-DU-5851 
"DEL PEAK  4(3P21.1) WILD-TYPE" "DEL PEAK  4(3P21.1) WILD-TYPE" 
                   TCGA-DU-5852                    TCGA-DU-5853 
"DEL PEAK  4(3P21.1) WILD-TYPE" "DEL PEAK  4(3P21.1) WILD-TYPE" 
                   TCGA-DU-5854                    TCGA-DU-5855 
"DEL PEAK  4(3P21.1) WILD-TYPE" "DEL PEAK  4(3P21.1) WILD-TYPE" 
                   TCGA-DU-5870                    TCGA-DU-5871 
"DEL PEAK  4(3P21.1) WILD-TYPE" "DEL PEAK  4(3P21.1) WILD-TYPE" 
                   TCGA-DU-5872                    TCGA-DU-5874 
"DEL PEAK  4(3P21.1) WILD-TYPE" "DEL PEAK  4(3P21.1) WILD-TYPE" 
                   TCGA-DU-6392                    TCGA-DU-6393 
"DEL PEAK  4(3P21.1) WILD-TYPE" "DEL PEAK  4(3P21.1) WILD-TYPE" 
                   TCGA-DU-6394                    TCGA-DU-6395 
"DEL PEAK  4(3P21.1) WILD-TYPE" "DEL PEAK  4(3P21.1) WILD-TYPE" 
                   TCGA-DU-6396                    TCGA-DU-6397 
  "DEL PEAK  4(3P21.1) MUTATED" "DEL PEAK  4(3P21.1) WILD-TYPE" 
                   TCGA-DU-6399                    TCGA-DU-6400 
"DEL PEAK  4(3P21.1) WILD-TYPE" "DEL PEAK  4(3P21.1) WILD-TYPE" 
                   TCGA-DU-6401                    TCGA-DU-6402 
"DEL PEAK  4(3P21.1) WILD-TYPE"   "DEL PEAK  4(3P21.1) MUTATED" 
                   TCGA-DU-6403                    TCGA-DU-6404 
"DEL PEAK  4(3P21.1) WILD-TYPE" "DEL PEAK  4(3P21.1) WILD-TYPE" 
                   TCGA-DU-6405                    TCGA-DU-6406 
"DEL PEAK  4(3P21.1) WILD-TYPE" "DEL PEAK  4(3P21.1) WILD-TYPE" 
                   TCGA-DU-6407                    TCGA-DU-6408 
"DEL PEAK  4(3P21.1) WILD-TYPE" "DEL PEAK  4(3P21.1) WILD-TYPE" 
                   TCGA-DU-6410                    TCGA-DU-6542 
"DEL PEAK  4(3P21.1) WILD-TYPE"   "DEL PEAK  4(3P21.1) MUTATED" 
                   TCGA-DU-7006                    TCGA-DU-7007 
"DEL PEAK  4(3P21.1) WILD-TYPE" "DEL PEAK  4(3P21.1) WILD-TYPE" 
                   TCGA-DU-7008                    TCGA-DU-7009 
"DEL PEAK  4(3P21.1) WILD-TYPE" "DEL PEAK  4(3P21.1) WILD-TYPE" 
                   TCGA-DU-7010                    TCGA-DU-7011 
  "DEL PEAK  4(3P21.1) MUTATED" "DEL PEAK  4(3P21.1) WILD-TYPE" 
                   TCGA-DU-7012                    TCGA-DU-7013 
"DEL PEAK  4(3P21.1) WILD-TYPE" "DEL PEAK  4(3P21.1) WILD-TYPE" 
                   TCGA-DU-7014                    TCGA-DU-7015 
"DEL PEAK  4(3P21.1) WILD-TYPE" "DEL PEAK  4(3P21.1) WILD-TYPE" 
                   TCGA-DU-7018                    TCGA-DU-7019 
"DEL PEAK  4(3P21.1) WILD-TYPE" "DEL PEAK  4(3P21.1) WILD-TYPE" 
                   TCGA-DU-7290                    TCGA-DU-7292 
"DEL PEAK  4(3P21.1) WILD-TYPE" "DEL PEAK  4(3P21.1) WILD-TYPE" 
                   TCGA-DU-7294                    TCGA-DU-7298 
"DEL PEAK  4(3P21.1) WILD-TYPE" "DEL PEAK  4(3P21.1) WILD-TYPE" 
                   TCGA-DU-7299                    TCGA-DU-7300 
"DEL PEAK  4(3P21.1) WILD-TYPE"   "DEL PEAK  4(3P21.1) MUTATED" 
                   TCGA-DU-7301                    TCGA-DU-7302 
"DEL PEAK  4(3P21.1) WILD-TYPE" "DEL PEAK  4(3P21.1) WILD-TYPE" 
                   TCGA-DU-7304                    TCGA-DU-7306 
"DEL PEAK  4(3P21.1) WILD-TYPE" "DEL PEAK  4(3P21.1) WILD-TYPE" 
                   TCGA-DU-7309                    TCGA-E1-5302 
"DEL PEAK  4(3P21.1) WILD-TYPE" "DEL PEAK  4(3P21.1) WILD-TYPE" 
                   TCGA-E1-5303                    TCGA-E1-5304 
"DEL PEAK  4(3P21.1) WILD-TYPE"   "DEL PEAK  4(3P21.1) MUTATED" 
                   TCGA-E1-5305                    TCGA-E1-5307 
"DEL PEAK  4(3P21.1) WILD-TYPE" "DEL PEAK  4(3P21.1) WILD-TYPE" 
                   TCGA-E1-5311                    TCGA-E1-5318 
"DEL PEAK  4(3P21.1) WILD-TYPE" "DEL PEAK  4(3P21.1) WILD-TYPE" 
                   TCGA-E1-5319                    TCGA-E1-5322 
"DEL PEAK  4(3P21.1) WILD-TYPE"   "DEL PEAK  4(3P21.1) MUTATED" 
                   TCGA-EZ-7264                    TCGA-FG-5962 
"DEL PEAK  4(3P21.1) WILD-TYPE" "DEL PEAK  4(3P21.1) WILD-TYPE" 
                   TCGA-FG-5963                    TCGA-FG-5964 
"DEL PEAK  4(3P21.1) WILD-TYPE" "DEL PEAK  4(3P21.1) WILD-TYPE" 
                   TCGA-FG-5965                    TCGA-FG-6688 
"DEL PEAK  4(3P21.1) WILD-TYPE" "DEL PEAK  4(3P21.1) WILD-TYPE" 
                   TCGA-FG-6689                    TCGA-FG-6690 
"DEL PEAK  4(3P21.1) WILD-TYPE" "DEL PEAK  4(3P21.1) WILD-TYPE" 
                   TCGA-FG-6691                    TCGA-FG-6692 
"DEL PEAK  4(3P21.1) WILD-TYPE" "DEL PEAK  4(3P21.1) WILD-TYPE" 
                   TCGA-FG-7634                    TCGA-FG-7636 
"DEL PEAK  4(3P21.1) WILD-TYPE" "DEL PEAK  4(3P21.1) WILD-TYPE" 
                   TCGA-FG-7638                    TCGA-FG-7643 
"DEL PEAK  4(3P21.1) WILD-TYPE" "DEL PEAK  4(3P21.1) WILD-TYPE" 
                   TCGA-FN-7833                    TCGA-HT-7467 
"DEL PEAK  4(3P21.1) WILD-TYPE" "DEL PEAK  4(3P21.1) WILD-TYPE" 
                   TCGA-HT-7468                    TCGA-HT-7470 
"DEL PEAK  4(3P21.1) WILD-TYPE" "DEL PEAK  4(3P21.1) WILD-TYPE" 
                   TCGA-HT-7472                    TCGA-HT-7473 
"DEL PEAK  4(3P21.1) WILD-TYPE"   "DEL PEAK  4(3P21.1) MUTATED" 
                   TCGA-HT-7474                    TCGA-HT-7475 
"DEL PEAK  4(3P21.1) WILD-TYPE" "DEL PEAK  4(3P21.1) WILD-TYPE" 
                   TCGA-HT-7476                    TCGA-HT-7478 
"DEL PEAK  4(3P21.1) WILD-TYPE"   "DEL PEAK  4(3P21.1) MUTATED" 
                   TCGA-HT-7479                    TCGA-HT-7480 
"DEL PEAK  4(3P21.1) WILD-TYPE" "DEL PEAK  4(3P21.1) WILD-TYPE" 
                   TCGA-HT-7481                    TCGA-HT-7482 
"DEL PEAK  4(3P21.1) WILD-TYPE"   "DEL PEAK  4(3P21.1) MUTATED" 
                   TCGA-HT-7483                    TCGA-HT-7485 
"DEL PEAK  4(3P21.1) WILD-TYPE" "DEL PEAK  4(3P21.1) WILD-TYPE" 
                   TCGA-HT-7601                    TCGA-HT-7602 
"DEL PEAK  4(3P21.1) WILD-TYPE" "DEL PEAK  4(3P21.1) WILD-TYPE" 
                   TCGA-HT-7603                    TCGA-HT-7604 
"DEL PEAK  4(3P21.1) WILD-TYPE" "DEL PEAK  4(3P21.1) WILD-TYPE" 
                   TCGA-HT-7605                    TCGA-HT-7606 
"DEL PEAK  4(3P21.1) WILD-TYPE"   "DEL PEAK  4(3P21.1) MUTATED" 
                   TCGA-HT-7607                    TCGA-HT-7608 
"DEL PEAK  4(3P21.1) WILD-TYPE" "DEL PEAK  4(3P21.1) WILD-TYPE" 
                   TCGA-HT-7609                    TCGA-HT-7610 
"DEL PEAK  4(3P21.1) WILD-TYPE" "DEL PEAK  4(3P21.1) WILD-TYPE" 
                   TCGA-HW-7486                    TCGA-HW-7487 
"DEL PEAK  4(3P21.1) WILD-TYPE" "DEL PEAK  4(3P21.1) WILD-TYPE" 
                   TCGA-HW-7489                    TCGA-HW-7490 
"DEL PEAK  4(3P21.1) WILD-TYPE" "DEL PEAK  4(3P21.1) WILD-TYPE" 
                   TCGA-HW-7491                    TCGA-HW-7493 
"DEL PEAK  4(3P21.1) WILD-TYPE" "DEL PEAK  4(3P21.1) WILD-TYPE" 
                   TCGA-HW-7495                    TCGA-IK-7675 
"DEL PEAK  4(3P21.1) WILD-TYPE"   "DEL PEAK  4(3P21.1) MUTATED" 
                   TCGA-IK-8125 
"DEL PEAK  4(3P21.1) WILD-TYPE" 
                   TCGA-CS-4938                    TCGA-CS-4941 
"DEL PEAK  4(3P21.1) WILD-TYPE" "DEL PEAK  4(3P21.1) WILD-TYPE" 
                   TCGA-CS-4942                    TCGA-CS-4943 
"DEL PEAK  4(3P21.1) WILD-TYPE" "DEL PEAK  4(3P21.1) WILD-TYPE" 
                   TCGA-CS-4944                    TCGA-CS-5390 
"DEL PEAK  4(3P21.1) WILD-TYPE" "DEL PEAK  4(3P21.1) WILD-TYPE" 
                   TCGA-CS-5393                    TCGA-CS-5394 
"DEL PEAK  4(3P21.1) WILD-TYPE" "DEL PEAK  4(3P21.1) WILD-TYPE" 
                   TCGA-CS-5395                    TCGA-CS-5396 
"DEL PEAK  4(3P21.1) WILD-TYPE" "DEL PEAK  4(3P21.1) WILD-TYPE" 
                   TCGA-CS-5397                    TCGA-CS-6186 
"DEL PEAK  4(3P21.1) WILD-TYPE" "DEL PEAK  4(3P21.1) WILD-TYPE" 
                   TCGA-CS-6188                    TCGA-CS-6290 
"DEL PEAK  4(3P21.1) WILD-TYPE" "DEL PEAK  4(3P21.1) WILD-TYPE" 
                   TCGA-CS-6665                    TCGA-CS-6666 
"DEL PEAK  4(3P21.1) WILD-TYPE"   "DEL PEAK  4(3P21.1) MUTATED" 
                   TCGA-CS-6667                    TCGA-CS-6668 
"DEL PEAK  4(3P21.1) WILD-TYPE" "DEL PEAK  4(3P21.1) WILD-TYPE" 
                   TCGA-CS-6669                    TCGA-CS-6670 
"DEL PEAK  4(3P21.1) WILD-TYPE" "DEL PEAK  4(3P21.1) WILD-TYPE" 
                   TCGA-DB-5270                    TCGA-DB-5273 
"DEL PEAK  4(3P21.1) WILD-TYPE" "DEL PEAK  4(3P21.1) WILD-TYPE" 
                   TCGA-DB-5274                    TCGA-DB-5275 
"DEL PEAK  4(3P21.1) WILD-TYPE"   "DEL PEAK  4(3P21.1) MUTATED" 
                   TCGA-DB-5276                    TCGA-DB-5277 
"DEL PEAK  4(3P21.1) WILD-TYPE"   "DEL PEAK  4(3P21.1) MUTATED" 
                   TCGA-DB-5278                    TCGA-DB-5279 
"DEL PEAK  4(3P21.1) WILD-TYPE" "DEL PEAK  4(3P21.1) WILD-TYPE" 
                   TCGA-DB-5280                    TCGA-DB-5281 
"DEL PEAK  4(3P21.1) WILD-TYPE" "DEL PEAK  4(3P21.1) WILD-TYPE" 
                   TCGA-DH-5140                    TCGA-DH-5141 
"DEL PEAK  4(3P21.1) WILD-TYPE" "DEL PEAK  4(3P21.1) WILD-TYPE" 
                   TCGA-DH-5142                    TCGA-DH-5143 
"DEL PEAK  4(3P21.1) WILD-TYPE" "DEL PEAK  4(3P21.1) WILD-TYPE" 
                   TCGA-DH-5144                    TCGA-DU-5847 
"DEL PEAK  4(3P21.1) WILD-TYPE" "DEL PEAK  4(3P21.1) WILD-TYPE" 
                   TCGA-DU-5849                    TCGA-DU-5851 
"DEL PEAK  4(3P21.1) WILD-TYPE" "DEL PEAK  4(3P21.1) WILD-TYPE" 
                   TCGA-DU-5852                    TCGA-DU-5853 
"DEL PEAK  4(3P21.1) WILD-TYPE" "DEL PEAK  4(3P21.1) WILD-TYPE" 
                   TCGA-DU-5854                    TCGA-DU-5855 
"DEL PEAK  4(3P21.1) WILD-TYPE" "DEL PEAK  4(3P21.1) WILD-TYPE" 
                   TCGA-DU-5870                    TCGA-DU-5871 
"DEL PEAK  4(3P21.1) WILD-TYPE" "DEL PEAK  4(3P21.1) WILD-TYPE" 
                   TCGA-DU-5872                    TCGA-DU-5874 
"DEL PEAK  4(3P21.1) WILD-TYPE" "DEL PEAK  4(3P21.1) WILD-TYPE" 
                   TCGA-DU-6392                    TCGA-DU-6393 
"DEL PEAK  4(3P21.1) WILD-TYPE" "DEL PEAK  4(3P21.1) WILD-TYPE" 
                   TCGA-DU-6394                    TCGA-DU-6395 
"DEL PEAK  4(3P21.1) WILD-TYPE" "DEL PEAK  4(3P21.1) WILD-TYPE" 
                   TCGA-DU-6396                    TCGA-DU-6397 
  "DEL PEAK  4(3P21.1) MUTATED" "DEL PEAK  4(3P21.1) WILD-TYPE" 
                   TCGA-DU-6399                    TCGA-DU-6400 
"DEL PEAK  4(3P21.1) WILD-TYPE" "DEL PEAK  4(3P21.1) WILD-TYPE" 
                   TCGA-DU-6401                    TCGA-DU-6402 
"DEL PEAK  4(3P21.1) WILD-TYPE"   "DEL PEAK  4(3P21.1) MUTATED" 
                   TCGA-DU-6403                    TCGA-DU-6404 
"DEL PEAK  4(3P21.1) WILD-TYPE" "DEL PEAK  4(3P21.1) WILD-TYPE" 
                   TCGA-DU-6405                    TCGA-DU-6406 
"DEL PEAK  4(3P21.1) WILD-TYPE" "DEL PEAK  4(3P21.1) WILD-TYPE" 
                   TCGA-DU-6407                    TCGA-DU-6408 
"DEL PEAK  4(3P21.1) WILD-TYPE" "DEL PEAK  4(3P21.1) WILD-TYPE" 
                   TCGA-DU-6410                    TCGA-DU-6542 
"DEL PEAK  4(3P21.1) WILD-TYPE"   "DEL PEAK  4(3P21.1) MUTATED" 
                   TCGA-DU-7006                    TCGA-DU-7007 
"DEL PEAK  4(3P21.1) WILD-TYPE" "DEL PEAK  4(3P21.1) WILD-TYPE" 
                   TCGA-DU-7008                    TCGA-DU-7009 
"DEL PEAK  4(3P21.1) WILD-TYPE" "DEL PEAK  4(3P21.1) WILD-TYPE" 
                   TCGA-DU-7010                    TCGA-DU-7011 
  "DEL PEAK  4(3P21.1) MUTATED" "DEL PEAK  4(3P21.1) WILD-TYPE" 
                   TCGA-DU-7012                    TCGA-DU-7013 
"DEL PEAK  4(3P21.1) WILD-TYPE" "DEL PEAK  4(3P21.1) WILD-TYPE" 
                   TCGA-DU-7014                    TCGA-DU-7015 
"DEL PEAK  4(3P21.1) WILD-TYPE" "DEL PEAK  4(3P21.1) WILD-TYPE" 
                   TCGA-DU-7018                    TCGA-DU-7019 
"DEL PEAK  4(3P21.1) WILD-TYPE" "DEL PEAK  4(3P21.1) WILD-TYPE" 
                   TCGA-DU-7290                    TCGA-DU-7292 
"DEL PEAK  4(3P21.1) WILD-TYPE" "DEL PEAK  4(3P21.1) WILD-TYPE" 
                   TCGA-DU-7294                    TCGA-DU-7298 
"DEL PEAK  4(3P21.1) WILD-TYPE" "DEL PEAK  4(3P21.1) WILD-TYPE" 
                   TCGA-DU-7299                    TCGA-DU-7300 
"DEL PEAK  4(3P21.1) WILD-TYPE"   "DEL PEAK  4(3P21.1) MUTATED" 
                   TCGA-DU-7301                    TCGA-DU-7302 
"DEL PEAK  4(3P21.1) WILD-TYPE" "DEL PEAK  4(3P21.1) WILD-TYPE" 
                   TCGA-DU-7304                    TCGA-DU-7306 
"DEL PEAK  4(3P21.1) WILD-TYPE" "DEL PEAK  4(3P21.1) WILD-TYPE" 
                   TCGA-DU-7309                    TCGA-E1-5302 
"DEL PEAK  4(3P21.1) WILD-TYPE" "DEL PEAK  4(3P21.1) WILD-TYPE" 
                   TCGA-E1-5303                    TCGA-E1-5304 
"DEL PEAK  4(3P21.1) WILD-TYPE"   "DEL PEAK  4(3P21.1) MUTATED" 
                   TCGA-E1-5305                    TCGA-E1-5307 
"DEL PEAK  4(3P21.1) WILD-TYPE" "DEL PEAK  4(3P21.1) WILD-TYPE" 
                   TCGA-E1-5311                    TCGA-E1-5318 
"DEL PEAK  4(3P21.1) WILD-TYPE" "DEL PEAK  4(3P21.1) WILD-TYPE" 
                   TCGA-E1-5319                    TCGA-E1-5322 
"DEL PEAK  4(3P21.1) WILD-TYPE"   "DEL PEAK  4(3P21.1) MUTATED" 
                   TCGA-EZ-7264                    TCGA-FG-5962 
"DEL PEAK  4(3P21.1) WILD-TYPE" "DEL PEAK  4(3P21.1) WILD-TYPE" 
                   TCGA-FG-5963                    TCGA-FG-5964 
"DEL PEAK  4(3P21.1) WILD-TYPE" "DEL PEAK  4(3P21.1) WILD-TYPE" 
                   TCGA-FG-5965                    TCGA-FG-6688 
"DEL PEAK  4(3P21.1) WILD-TYPE" "DEL PEAK  4(3P21.1) WILD-TYPE" 
                   TCGA-FG-6689                    TCGA-FG-6690 
"DEL PEAK  4(3P21.1) WILD-TYPE" "DEL PEAK  4(3P21.1) WILD-TYPE" 
                   TCGA-FG-6691                    TCGA-FG-6692 
"DEL PEAK  4(3P21.1) WILD-TYPE" "DEL PEAK  4(3P21.1) WILD-TYPE" 
                   TCGA-FG-7634                    TCGA-FG-7636 
"DEL PEAK  4(3P21.1) WILD-TYPE" "DEL PEAK  4(3P21.1) WILD-TYPE" 
                   TCGA-FG-7638                    TCGA-FG-7643 
"DEL PEAK  4(3P21.1) WILD-TYPE" "DEL PEAK  4(3P21.1) WILD-TYPE" 
                   TCGA-FN-7833                    TCGA-HT-7467 
"DEL PEAK  4(3P21.1) WILD-TYPE" "DEL PEAK  4(3P21.1) WILD-TYPE" 
                   TCGA-HT-7468                    TCGA-HT-7470 
"DEL PEAK  4(3P21.1) WILD-TYPE" "DEL PEAK  4(3P21.1) WILD-TYPE" 
                   TCGA-HT-7472                    TCGA-HT-7473 
"DEL PEAK  4(3P21.1) WILD-TYPE"   "DEL PEAK  4(3P21.1) MUTATED" 
                   TCGA-HT-7474                    TCGA-HT-7475 
"DEL PEAK  4(3P21.1) WILD-TYPE" "DEL PEAK  4(3P21.1) WILD-TYPE" 
                   TCGA-HT-7476                    TCGA-HT-7478 
"DEL PEAK  4(3P21.1) WILD-TYPE"   "DEL PEAK  4(3P21.1) MUTATED" 
                   TCGA-HT-7479                    TCGA-HT-7480 
"DEL PEAK  4(3P21.1) WILD-TYPE" "DEL PEAK  4(3P21.1) WILD-TYPE" 
                   TCGA-HT-7481                    TCGA-HT-7482 
"DEL PEAK  4(3P21.1) WILD-TYPE"   "DEL PEAK  4(3P21.1) MUTATED" 
                   TCGA-HT-7483                    TCGA-HT-7485 
"DEL PEAK  4(3P21.1) WILD-TYPE" "DEL PEAK  4(3P21.1) WILD-TYPE" 
                   TCGA-HT-7601                    TCGA-HT-7602 
"DEL PEAK  4(3P21.1) WILD-TYPE" "DEL PEAK  4(3P21.1) WILD-TYPE" 
                   TCGA-HT-7603                    TCGA-HT-7604 
"DEL PEAK  4(3P21.1) WILD-TYPE" "DEL PEAK  4(3P21.1) WILD-TYPE" 
                   TCGA-HT-7605                    TCGA-HT-7606 
"DEL PEAK  4(3P21.1) WILD-TYPE"   "DEL PEAK  4(3P21.1) MUTATED" 
                   TCGA-HT-7607                    TCGA-HT-7608 
"DEL PEAK  4(3P21.1) WILD-TYPE" "DEL PEAK  4(3P21.1) WILD-TYPE" 
                   TCGA-HT-7609                    TCGA-HT-7610 
"DEL PEAK  4(3P21.1) WILD-TYPE" "DEL PEAK  4(3P21.1) WILD-TYPE" 
                   TCGA-HW-7486                    TCGA-HW-7487 
"DEL PEAK  4(3P21.1) WILD-TYPE" "DEL PEAK  4(3P21.1) WILD-TYPE" 
                   TCGA-HW-7489                    TCGA-HW-7490 
"DEL PEAK  4(3P21.1) WILD-TYPE" "DEL PEAK  4(3P21.1) WILD-TYPE" 
                   TCGA-HW-7491                    TCGA-HW-7493 
"DEL PEAK  4(3P21.1) WILD-TYPE" "DEL PEAK  4(3P21.1) WILD-TYPE" 
                   TCGA-HW-7495                    TCGA-IK-7675 
"DEL PEAK  4(3P21.1) WILD-TYPE"   "DEL PEAK  4(3P21.1) MUTATED" 
                   TCGA-IK-8125 
"DEL PEAK  4(3P21.1) WILD-TYPE" 
[1] "hr=" "1.5"
D18V2, continuous
D18V3, binary
[1] "tbl2"
                               cls
clus                            [,1] [,2]
  DEL PEAK  4(3P21.1) MUTATED      6    9
  DEL PEAK  4(3P21.1) WILD-TYPE   56   74
        clus
vv       DEL PEAK  4(3P21.1) MUTATED DEL PEAK  4(3P21.1) WILD-TYPE
  FEMALE                           6                            56
  MALE                             9                            74
D18V4, continuous
D18V5, multiclass
                   clus
vv                  DEL PEAK  4(3P21.1) MUTATED DEL PEAK  4(3P21.1) WILD-TYPE
  ASTROCYTOMA                                 7                            43
  OLIGOASTROCYTOMA                            4                            32
  OLIGODENDROGLIOMA                           3                            55
D18V6, binary
[1] "tbl2"
                               cls
clus                            [,1] [,2]
  DEL PEAK  4(3P21.1) MUTATED      3   12
  DEL PEAK  4(3P21.1) WILD-TYPE   56   74
     clus
vv    DEL PEAK  4(3P21.1) MUTATED DEL PEAK  4(3P21.1) WILD-TYPE
  NO                           12                            74
  YES                           3                            56
D18V7, binary
[1] "tbl2"
                               cls
clus                            [,1] [,2]
  DEL PEAK  4(3P21.1) MUTATED      7    8
  DEL PEAK  4(3P21.1) WILD-TYPE   67   63
     clus
vv    DEL PEAK  4(3P21.1) MUTATED DEL PEAK  4(3P21.1) WILD-TYPE
  NO                            8                            63
  YES                           7                            67

Clustering(19) Variable = Del Peak  5(3q29) mutation analysis
D19V1, survival
                 TCGA-CS-4938                  TCGA-CS-4941 
"DEL PEAK  5(3Q29) WILD-TYPE" "DEL PEAK  5(3Q29) WILD-TYPE" 
                 TCGA-CS-4942                  TCGA-CS-4943 
"DEL PEAK  5(3Q29) WILD-TYPE" "DEL PEAK  5(3Q29) WILD-TYPE" 
                 TCGA-CS-4944                  TCGA-CS-5390 
"DEL PEAK  5(3Q29) WILD-TYPE" "DEL PEAK  5(3Q29) WILD-TYPE" 
                 TCGA-CS-5393                  TCGA-CS-5394 
"DEL PEAK  5(3Q29) WILD-TYPE" "DEL PEAK  5(3Q29) WILD-TYPE" 
                 TCGA-CS-5395                  TCGA-CS-5396 
"DEL PEAK  5(3Q29) WILD-TYPE" "DEL PEAK  5(3Q29) WILD-TYPE" 
                 TCGA-CS-5397                  TCGA-CS-6186 
"DEL PEAK  5(3Q29) WILD-TYPE" "DEL PEAK  5(3Q29) WILD-TYPE" 
                 TCGA-CS-6188                  TCGA-CS-6290 
"DEL PEAK  5(3Q29) WILD-TYPE"   "DEL PEAK  5(3Q29) MUTATED" 
                 TCGA-CS-6665                  TCGA-CS-6666 
"DEL PEAK  5(3Q29) WILD-TYPE"   "DEL PEAK  5(3Q29) MUTATED" 
                 TCGA-CS-6667                  TCGA-CS-6668 
"DEL PEAK  5(3Q29) WILD-TYPE" "DEL PEAK  5(3Q29) WILD-TYPE" 
                 TCGA-CS-6669                  TCGA-CS-6670 
"DEL PEAK  5(3Q29) WILD-TYPE" "DEL PEAK  5(3Q29) WILD-TYPE" 
                 TCGA-DB-5270                  TCGA-DB-5273 
"DEL PEAK  5(3Q29) WILD-TYPE" "DEL PEAK  5(3Q29) WILD-TYPE" 
                 TCGA-DB-5274                  TCGA-DB-5275 
"DEL PEAK  5(3Q29) WILD-TYPE" "DEL PEAK  5(3Q29) WILD-TYPE" 
                 TCGA-DB-5276                  TCGA-DB-5277 
"DEL PEAK  5(3Q29) WILD-TYPE"   "DEL PEAK  5(3Q29) MUTATED" 
                 TCGA-DB-5278                  TCGA-DB-5279 
"DEL PEAK  5(3Q29) WILD-TYPE" "DEL PEAK  5(3Q29) WILD-TYPE" 
                 TCGA-DB-5280                  TCGA-DB-5281 
"DEL PEAK  5(3Q29) WILD-TYPE"   "DEL PEAK  5(3Q29) MUTATED" 
                 TCGA-DH-5140                  TCGA-DH-5141 
"DEL PEAK  5(3Q29) WILD-TYPE" "DEL PEAK  5(3Q29) WILD-TYPE" 
                 TCGA-DH-5142                  TCGA-DH-5143 
"DEL PEAK  5(3Q29) WILD-TYPE" "DEL PEAK  5(3Q29) WILD-TYPE" 
                 TCGA-DH-5144                  TCGA-DU-5847 
"DEL PEAK  5(3Q29) WILD-TYPE" "DEL PEAK  5(3Q29) WILD-TYPE" 
                 TCGA-DU-5849                  TCGA-DU-5851 
"DEL PEAK  5(3Q29) WILD-TYPE" "DEL PEAK  5(3Q29) WILD-TYPE" 
                 TCGA-DU-5852                  TCGA-DU-5853 
"DEL PEAK  5(3Q29) WILD-TYPE" "DEL PEAK  5(3Q29) WILD-TYPE" 
                 TCGA-DU-5854                  TCGA-DU-5855 
"DEL PEAK  5(3Q29) WILD-TYPE" "DEL PEAK  5(3Q29) WILD-TYPE" 
                 TCGA-DU-5870                  TCGA-DU-5871 
"DEL PEAK  5(3Q29) WILD-TYPE" "DEL PEAK  5(3Q29) WILD-TYPE" 
                 TCGA-DU-5872                  TCGA-DU-5874 
"DEL PEAK  5(3Q29) WILD-TYPE" "DEL PEAK  5(3Q29) WILD-TYPE" 
                 TCGA-DU-6392                  TCGA-DU-6393 
"DEL PEAK  5(3Q29) WILD-TYPE" "DEL PEAK  5(3Q29) WILD-TYPE" 
                 TCGA-DU-6394                  TCGA-DU-6395 
"DEL PEAK  5(3Q29) WILD-TYPE"   "DEL PEAK  5(3Q29) MUTATED" 
                 TCGA-DU-6396                  TCGA-DU-6397 
"DEL PEAK  5(3Q29) WILD-TYPE" "DEL PEAK  5(3Q29) WILD-TYPE" 
                 TCGA-DU-6399                  TCGA-DU-6400 
"DEL PEAK  5(3Q29) WILD-TYPE" "DEL PEAK  5(3Q29) WILD-TYPE" 
                 TCGA-DU-6401                  TCGA-DU-6402 
"DEL PEAK  5(3Q29) WILD-TYPE" "DEL PEAK  5(3Q29) WILD-TYPE" 
                 TCGA-DU-6403                  TCGA-DU-6404 
"DEL PEAK  5(3Q29) WILD-TYPE" "DEL PEAK  5(3Q29) WILD-TYPE" 
                 TCGA-DU-6405                  TCGA-DU-6406 
"DEL PEAK  5(3Q29) WILD-TYPE" "DEL PEAK  5(3Q29) WILD-TYPE" 
                 TCGA-DU-6407                  TCGA-DU-6408 
"DEL PEAK  5(3Q29) WILD-TYPE" "DEL PEAK  5(3Q29) WILD-TYPE" 
                 TCGA-DU-6410                  TCGA-DU-6542 
"DEL PEAK  5(3Q29) WILD-TYPE" "DEL PEAK  5(3Q29) WILD-TYPE" 
                 TCGA-DU-7006                  TCGA-DU-7007 
"DEL PEAK  5(3Q29) WILD-TYPE"   "DEL PEAK  5(3Q29) MUTATED" 
                 TCGA-DU-7008                  TCGA-DU-7009 
"DEL PEAK  5(3Q29) WILD-TYPE" "DEL PEAK  5(3Q29) WILD-TYPE" 
                 TCGA-DU-7010                  TCGA-DU-7011 
  "DEL PEAK  5(3Q29) MUTATED" "DEL PEAK  5(3Q29) WILD-TYPE" 
                 TCGA-DU-7012                  TCGA-DU-7013 
"DEL PEAK  5(3Q29) WILD-TYPE" "DEL PEAK  5(3Q29) WILD-TYPE" 
                 TCGA-DU-7014                  TCGA-DU-7015 
  "DEL PEAK  5(3Q29) MUTATED" "DEL PEAK  5(3Q29) WILD-TYPE" 
                 TCGA-DU-7018                  TCGA-DU-7019 
"DEL PEAK  5(3Q29) WILD-TYPE" "DEL PEAK  5(3Q29) WILD-TYPE" 
                 TCGA-DU-7290                  TCGA-DU-7292 
"DEL PEAK  5(3Q29) WILD-TYPE" "DEL PEAK  5(3Q29) WILD-TYPE" 
                 TCGA-DU-7294                  TCGA-DU-7298 
"DEL PEAK  5(3Q29) WILD-TYPE"   "DEL PEAK  5(3Q29) MUTATED" 
                 TCGA-DU-7299                  TCGA-DU-7300 
"DEL PEAK  5(3Q29) WILD-TYPE"   "DEL PEAK  5(3Q29) MUTATED" 
                 TCGA-DU-7301                  TCGA-DU-7302 
"DEL PEAK  5(3Q29) WILD-TYPE" "DEL PEAK  5(3Q29) WILD-TYPE" 
                 TCGA-DU-7304                  TCGA-DU-7306 
"DEL PEAK  5(3Q29) WILD-TYPE" "DEL PEAK  5(3Q29) WILD-TYPE" 
                 TCGA-DU-7309                  TCGA-E1-5302 
"DEL PEAK  5(3Q29) WILD-TYPE"   "DEL PEAK  5(3Q29) MUTATED" 
                 TCGA-E1-5303                  TCGA-E1-5304 
"DEL PEAK  5(3Q29) WILD-TYPE" "DEL PEAK  5(3Q29) WILD-TYPE" 
                 TCGA-E1-5305                  TCGA-E1-5307 
"DEL PEAK  5(3Q29) WILD-TYPE" "DEL PEAK  5(3Q29) WILD-TYPE" 
                 TCGA-E1-5311                  TCGA-E1-5318 
"DEL PEAK  5(3Q29) WILD-TYPE" "DEL PEAK  5(3Q29) WILD-TYPE" 
                 TCGA-E1-5319                  TCGA-E1-5322 
"DEL PEAK  5(3Q29) WILD-TYPE" "DEL PEAK  5(3Q29) WILD-TYPE" 
                 TCGA-EZ-7264                  TCGA-FG-5962 
"DEL PEAK  5(3Q29) WILD-TYPE" "DEL PEAK  5(3Q29) WILD-TYPE" 
                 TCGA-FG-5963                  TCGA-FG-5964 
  "DEL PEAK  5(3Q29) MUTATED" "DEL PEAK  5(3Q29) WILD-TYPE" 
                 TCGA-FG-5965                  TCGA-FG-6688 
"DEL PEAK  5(3Q29) WILD-TYPE" "DEL PEAK  5(3Q29) WILD-TYPE" 
                 TCGA-FG-6689                  TCGA-FG-6690 
"DEL PEAK  5(3Q29) WILD-TYPE" "DEL PEAK  5(3Q29) WILD-TYPE" 
                 TCGA-FG-6691                  TCGA-FG-6692 
  "DEL PEAK  5(3Q29) MUTATED" "DEL PEAK  5(3Q29) WILD-TYPE" 
                 TCGA-FG-7634                  TCGA-FG-7636 
"DEL PEAK  5(3Q29) WILD-TYPE" "DEL PEAK  5(3Q29) WILD-TYPE" 
                 TCGA-FG-7638                  TCGA-FG-7643 
"DEL PEAK  5(3Q29) WILD-TYPE" "DEL PEAK  5(3Q29) WILD-TYPE" 
                 TCGA-FN-7833                  TCGA-HT-7467 
"DEL PEAK  5(3Q29) WILD-TYPE" "DEL PEAK  5(3Q29) WILD-TYPE" 
                 TCGA-HT-7468                  TCGA-HT-7470 
"DEL PEAK  5(3Q29) WILD-TYPE"   "DEL PEAK  5(3Q29) MUTATED" 
                 TCGA-HT-7472                  TCGA-HT-7473 
  "DEL PEAK  5(3Q29) MUTATED" "DEL PEAK  5(3Q29) WILD-TYPE" 
                 TCGA-HT-7474                  TCGA-HT-7475 
"DEL PEAK  5(3Q29) WILD-TYPE" "DEL PEAK  5(3Q29) WILD-TYPE" 
                 TCGA-HT-7476                  TCGA-HT-7478 
"DEL PEAK  5(3Q29) WILD-TYPE" "DEL PEAK  5(3Q29) WILD-TYPE" 
                 TCGA-HT-7479                  TCGA-HT-7480 
"DEL PEAK  5(3Q29) WILD-TYPE" "DEL PEAK  5(3Q29) WILD-TYPE" 
                 TCGA-HT-7481                  TCGA-HT-7482 
"DEL PEAK  5(3Q29) WILD-TYPE" "DEL PEAK  5(3Q29) WILD-TYPE" 
                 TCGA-HT-7483                  TCGA-HT-7485 
"DEL PEAK  5(3Q29) WILD-TYPE" "DEL PEAK  5(3Q29) WILD-TYPE" 
                 TCGA-HT-7601                  TCGA-HT-7602 
"DEL PEAK  5(3Q29) WILD-TYPE" "DEL PEAK  5(3Q29) WILD-TYPE" 
                 TCGA-HT-7603                  TCGA-HT-7604 
"DEL PEAK  5(3Q29) WILD-TYPE"   "DEL PEAK  5(3Q29) MUTATED" 
                 TCGA-HT-7605                  TCGA-HT-7606 
"DEL PEAK  5(3Q29) WILD-TYPE" "DEL PEAK  5(3Q29) WILD-TYPE" 
                 TCGA-HT-7607                  TCGA-HT-7608 
"DEL PEAK  5(3Q29) WILD-TYPE" "DEL PEAK  5(3Q29) WILD-TYPE" 
                 TCGA-HT-7609                  TCGA-HT-7610 
"DEL PEAK  5(3Q29) WILD-TYPE" "DEL PEAK  5(3Q29) WILD-TYPE" 
                 TCGA-HW-7486                  TCGA-HW-7487 
"DEL PEAK  5(3Q29) WILD-TYPE" "DEL PEAK  5(3Q29) WILD-TYPE" 
                 TCGA-HW-7489                  TCGA-HW-7490 
"DEL PEAK  5(3Q29) WILD-TYPE" "DEL PEAK  5(3Q29) WILD-TYPE" 
                 TCGA-HW-7491                  TCGA-HW-7493 
"DEL PEAK  5(3Q29) WILD-TYPE" "DEL PEAK  5(3Q29) WILD-TYPE" 
                 TCGA-HW-7495                  TCGA-IK-7675 
"DEL PEAK  5(3Q29) WILD-TYPE"   "DEL PEAK  5(3Q29) MUTATED" 
                 TCGA-IK-8125 
"DEL PEAK  5(3Q29) WILD-TYPE" 
                 TCGA-CS-4938                  TCGA-CS-4941 
"DEL PEAK  5(3Q29) WILD-TYPE" "DEL PEAK  5(3Q29) WILD-TYPE" 
                 TCGA-CS-4942                  TCGA-CS-4943 
"DEL PEAK  5(3Q29) WILD-TYPE" "DEL PEAK  5(3Q29) WILD-TYPE" 
                 TCGA-CS-4944                  TCGA-CS-5390 
"DEL PEAK  5(3Q29) WILD-TYPE" "DEL PEAK  5(3Q29) WILD-TYPE" 
                 TCGA-CS-5393                  TCGA-CS-5394 
"DEL PEAK  5(3Q29) WILD-TYPE" "DEL PEAK  5(3Q29) WILD-TYPE" 
                 TCGA-CS-5395                  TCGA-CS-5396 
"DEL PEAK  5(3Q29) WILD-TYPE" "DEL PEAK  5(3Q29) WILD-TYPE" 
                 TCGA-CS-5397                  TCGA-CS-6186 
"DEL PEAK  5(3Q29) WILD-TYPE" "DEL PEAK  5(3Q29) WILD-TYPE" 
                 TCGA-CS-6188                  TCGA-CS-6290 
"DEL PEAK  5(3Q29) WILD-TYPE"   "DEL PEAK  5(3Q29) MUTATED" 
                 TCGA-CS-6665                  TCGA-CS-6666 
"DEL PEAK  5(3Q29) WILD-TYPE"   "DEL PEAK  5(3Q29) MUTATED" 
                 TCGA-CS-6667                  TCGA-CS-6668 
"DEL PEAK  5(3Q29) WILD-TYPE" "DEL PEAK  5(3Q29) WILD-TYPE" 
                 TCGA-CS-6669                  TCGA-CS-6670 
"DEL PEAK  5(3Q29) WILD-TYPE" "DEL PEAK  5(3Q29) WILD-TYPE" 
                 TCGA-DB-5270                  TCGA-DB-5273 
"DEL PEAK  5(3Q29) WILD-TYPE" "DEL PEAK  5(3Q29) WILD-TYPE" 
                 TCGA-DB-5274                  TCGA-DB-5275 
"DEL PEAK  5(3Q29) WILD-TYPE" "DEL PEAK  5(3Q29) WILD-TYPE" 
                 TCGA-DB-5276                  TCGA-DB-5277 
"DEL PEAK  5(3Q29) WILD-TYPE"   "DEL PEAK  5(3Q29) MUTATED" 
                 TCGA-DB-5278                  TCGA-DB-5279 
"DEL PEAK  5(3Q29) WILD-TYPE" "DEL PEAK  5(3Q29) WILD-TYPE" 
                 TCGA-DB-5280                  TCGA-DB-5281 
"DEL PEAK  5(3Q29) WILD-TYPE"   "DEL PEAK  5(3Q29) MUTATED" 
                 TCGA-DH-5140                  TCGA-DH-5141 
"DEL PEAK  5(3Q29) WILD-TYPE" "DEL PEAK  5(3Q29) WILD-TYPE" 
                 TCGA-DH-5142                  TCGA-DH-5143 
"DEL PEAK  5(3Q29) WILD-TYPE" "DEL PEAK  5(3Q29) WILD-TYPE" 
                 TCGA-DH-5144                  TCGA-DU-5847 
"DEL PEAK  5(3Q29) WILD-TYPE" "DEL PEAK  5(3Q29) WILD-TYPE" 
                 TCGA-DU-5849                  TCGA-DU-5851 
"DEL PEAK  5(3Q29) WILD-TYPE" "DEL PEAK  5(3Q29) WILD-TYPE" 
                 TCGA-DU-5852                  TCGA-DU-5853 
"DEL PEAK  5(3Q29) WILD-TYPE" "DEL PEAK  5(3Q29) WILD-TYPE" 
                 TCGA-DU-5854                  TCGA-DU-5855 
"DEL PEAK  5(3Q29) WILD-TYPE" "DEL PEAK  5(3Q29) WILD-TYPE" 
                 TCGA-DU-5870                  TCGA-DU-5871 
"DEL PEAK  5(3Q29) WILD-TYPE" "DEL PEAK  5(3Q29) WILD-TYPE" 
                 TCGA-DU-5872                  TCGA-DU-5874 
"DEL PEAK  5(3Q29) WILD-TYPE" "DEL PEAK  5(3Q29) WILD-TYPE" 
                 TCGA-DU-6392                  TCGA-DU-6393 
"DEL PEAK  5(3Q29) WILD-TYPE" "DEL PEAK  5(3Q29) WILD-TYPE" 
                 TCGA-DU-6394                  TCGA-DU-6395 
"DEL PEAK  5(3Q29) WILD-TYPE"   "DEL PEAK  5(3Q29) MUTATED" 
                 TCGA-DU-6396                  TCGA-DU-6397 
"DEL PEAK  5(3Q29) WILD-TYPE" "DEL PEAK  5(3Q29) WILD-TYPE" 
                 TCGA-DU-6399                  TCGA-DU-6400 
"DEL PEAK  5(3Q29) WILD-TYPE" "DEL PEAK  5(3Q29) WILD-TYPE" 
                 TCGA-DU-6401                  TCGA-DU-6402 
"DEL PEAK  5(3Q29) WILD-TYPE" "DEL PEAK  5(3Q29) WILD-TYPE" 
                 TCGA-DU-6403                  TCGA-DU-6404 
"DEL PEAK  5(3Q29) WILD-TYPE" "DEL PEAK  5(3Q29) WILD-TYPE" 
                 TCGA-DU-6405                  TCGA-DU-6406 
"DEL PEAK  5(3Q29) WILD-TYPE" "DEL PEAK  5(3Q29) WILD-TYPE" 
                 TCGA-DU-6407                  TCGA-DU-6408 
"DEL PEAK  5(3Q29) WILD-TYPE" "DEL PEAK  5(3Q29) WILD-TYPE" 
                 TCGA-DU-6410                  TCGA-DU-6542 
"DEL PEAK  5(3Q29) WILD-TYPE" "DEL PEAK  5(3Q29) WILD-TYPE" 
                 TCGA-DU-7006                  TCGA-DU-7007 
"DEL PEAK  5(3Q29) WILD-TYPE"   "DEL PEAK  5(3Q29) MUTATED" 
                 TCGA-DU-7008                  TCGA-DU-7009 
"DEL PEAK  5(3Q29) WILD-TYPE" "DEL PEAK  5(3Q29) WILD-TYPE" 
                 TCGA-DU-7010                  TCGA-DU-7011 
  "DEL PEAK  5(3Q29) MUTATED" "DEL PEAK  5(3Q29) WILD-TYPE" 
                 TCGA-DU-7012                  TCGA-DU-7013 
"DEL PEAK  5(3Q29) WILD-TYPE" "DEL PEAK  5(3Q29) WILD-TYPE" 
                 TCGA-DU-7014                  TCGA-DU-7015 
  "DEL PEAK  5(3Q29) MUTATED" "DEL PEAK  5(3Q29) WILD-TYPE" 
                 TCGA-DU-7018                  TCGA-DU-7019 
"DEL PEAK  5(3Q29) WILD-TYPE" "DEL PEAK  5(3Q29) WILD-TYPE" 
                 TCGA-DU-7290                  TCGA-DU-7292 
"DEL PEAK  5(3Q29) WILD-TYPE" "DEL PEAK  5(3Q29) WILD-TYPE" 
                 TCGA-DU-7294                  TCGA-DU-7298 
"DEL PEAK  5(3Q29) WILD-TYPE"   "DEL PEAK  5(3Q29) MUTATED" 
                 TCGA-DU-7299                  TCGA-DU-7300 
"DEL PEAK  5(3Q29) WILD-TYPE"   "DEL PEAK  5(3Q29) MUTATED" 
                 TCGA-DU-7301                  TCGA-DU-7302 
"DEL PEAK  5(3Q29) WILD-TYPE" "DEL PEAK  5(3Q29) WILD-TYPE" 
                 TCGA-DU-7304                  TCGA-DU-7306 
"DEL PEAK  5(3Q29) WILD-TYPE" "DEL PEAK  5(3Q29) WILD-TYPE" 
                 TCGA-DU-7309                  TCGA-E1-5302 
"DEL PEAK  5(3Q29) WILD-TYPE"   "DEL PEAK  5(3Q29) MUTATED" 
                 TCGA-E1-5303                  TCGA-E1-5304 
"DEL PEAK  5(3Q29) WILD-TYPE" "DEL PEAK  5(3Q29) WILD-TYPE" 
                 TCGA-E1-5305                  TCGA-E1-5307 
"DEL PEAK  5(3Q29) WILD-TYPE" "DEL PEAK  5(3Q29) WILD-TYPE" 
                 TCGA-E1-5311                  TCGA-E1-5318 
"DEL PEAK  5(3Q29) WILD-TYPE" "DEL PEAK  5(3Q29) WILD-TYPE" 
                 TCGA-E1-5319                  TCGA-E1-5322 
"DEL PEAK  5(3Q29) WILD-TYPE" "DEL PEAK  5(3Q29) WILD-TYPE" 
                 TCGA-EZ-7264                  TCGA-FG-5962 
"DEL PEAK  5(3Q29) WILD-TYPE" "DEL PEAK  5(3Q29) WILD-TYPE" 
                 TCGA-FG-5963                  TCGA-FG-5964 
  "DEL PEAK  5(3Q29) MUTATED" "DEL PEAK  5(3Q29) WILD-TYPE" 
                 TCGA-FG-5965                  TCGA-FG-6688 
"DEL PEAK  5(3Q29) WILD-TYPE" "DEL PEAK  5(3Q29) WILD-TYPE" 
                 TCGA-FG-6689                  TCGA-FG-6690 
"DEL PEAK  5(3Q29) WILD-TYPE" "DEL PEAK  5(3Q29) WILD-TYPE" 
                 TCGA-FG-6691                  TCGA-FG-6692 
  "DEL PEAK  5(3Q29) MUTATED" "DEL PEAK  5(3Q29) WILD-TYPE" 
                 TCGA-FG-7634                  TCGA-FG-7636 
"DEL PEAK  5(3Q29) WILD-TYPE" "DEL PEAK  5(3Q29) WILD-TYPE" 
                 TCGA-FG-7638                  TCGA-FG-7643 
"DEL PEAK  5(3Q29) WILD-TYPE" "DEL PEAK  5(3Q29) WILD-TYPE" 
                 TCGA-FN-7833                  TCGA-HT-7467 
"DEL PEAK  5(3Q29) WILD-TYPE" "DEL PEAK  5(3Q29) WILD-TYPE" 
                 TCGA-HT-7468                  TCGA-HT-7470 
"DEL PEAK  5(3Q29) WILD-TYPE"   "DEL PEAK  5(3Q29) MUTATED" 
                 TCGA-HT-7472                  TCGA-HT-7473 
  "DEL PEAK  5(3Q29) MUTATED" "DEL PEAK  5(3Q29) WILD-TYPE" 
                 TCGA-HT-7474                  TCGA-HT-7475 
"DEL PEAK  5(3Q29) WILD-TYPE" "DEL PEAK  5(3Q29) WILD-TYPE" 
                 TCGA-HT-7476                  TCGA-HT-7478 
"DEL PEAK  5(3Q29) WILD-TYPE" "DEL PEAK  5(3Q29) WILD-TYPE" 
                 TCGA-HT-7479                  TCGA-HT-7480 
"DEL PEAK  5(3Q29) WILD-TYPE" "DEL PEAK  5(3Q29) WILD-TYPE" 
                 TCGA-HT-7481                  TCGA-HT-7482 
"DEL PEAK  5(3Q29) WILD-TYPE" "DEL PEAK  5(3Q29) WILD-TYPE" 
                 TCGA-HT-7483                  TCGA-HT-7485 
"DEL PEAK  5(3Q29) WILD-TYPE" "DEL PEAK  5(3Q29) WILD-TYPE" 
                 TCGA-HT-7601                  TCGA-HT-7602 
"DEL PEAK  5(3Q29) WILD-TYPE" "DEL PEAK  5(3Q29) WILD-TYPE" 
                 TCGA-HT-7603                  TCGA-HT-7604 
"DEL PEAK  5(3Q29) WILD-TYPE"   "DEL PEAK  5(3Q29) MUTATED" 
                 TCGA-HT-7605                  TCGA-HT-7606 
"DEL PEAK  5(3Q29) WILD-TYPE" "DEL PEAK  5(3Q29) WILD-TYPE" 
                 TCGA-HT-7607                  TCGA-HT-7608 
"DEL PEAK  5(3Q29) WILD-TYPE" "DEL PEAK  5(3Q29) WILD-TYPE" 
                 TCGA-HT-7609                  TCGA-HT-7610 
"DEL PEAK  5(3Q29) WILD-TYPE" "DEL PEAK  5(3Q29) WILD-TYPE" 
                 TCGA-HW-7486                  TCGA-HW-7487 
"DEL PEAK  5(3Q29) WILD-TYPE" "DEL PEAK  5(3Q29) WILD-TYPE" 
                 TCGA-HW-7489                  TCGA-HW-7490 
"DEL PEAK  5(3Q29) WILD-TYPE" "DEL PEAK  5(3Q29) WILD-TYPE" 
                 TCGA-HW-7491                  TCGA-HW-7493 
"DEL PEAK  5(3Q29) WILD-TYPE" "DEL PEAK  5(3Q29) WILD-TYPE" 
                 TCGA-HW-7495                  TCGA-IK-7675 
"DEL PEAK  5(3Q29) WILD-TYPE"   "DEL PEAK  5(3Q29) MUTATED" 
                 TCGA-IK-8125 
"DEL PEAK  5(3Q29) WILD-TYPE" 
                 TCGA-CS-4938                  TCGA-CS-4941 
"DEL PEAK  5(3Q29) WILD-TYPE" "DEL PEAK  5(3Q29) WILD-TYPE" 
                 TCGA-CS-4942                  TCGA-CS-4943 
"DEL PEAK  5(3Q29) WILD-TYPE" "DEL PEAK  5(3Q29) WILD-TYPE" 
                 TCGA-CS-4944                  TCGA-CS-5390 
"DEL PEAK  5(3Q29) WILD-TYPE" "DEL PEAK  5(3Q29) WILD-TYPE" 
                 TCGA-CS-5393                  TCGA-CS-5394 
"DEL PEAK  5(3Q29) WILD-TYPE" "DEL PEAK  5(3Q29) WILD-TYPE" 
                 TCGA-CS-5395                  TCGA-CS-5396 
"DEL PEAK  5(3Q29) WILD-TYPE" "DEL PEAK  5(3Q29) WILD-TYPE" 
                 TCGA-CS-5397                  TCGA-CS-6186 
"DEL PEAK  5(3Q29) WILD-TYPE" "DEL PEAK  5(3Q29) WILD-TYPE" 
                 TCGA-CS-6188                  TCGA-CS-6290 
"DEL PEAK  5(3Q29) WILD-TYPE"   "DEL PEAK  5(3Q29) MUTATED" 
                 TCGA-CS-6665                  TCGA-CS-6666 
"DEL PEAK  5(3Q29) WILD-TYPE"   "DEL PEAK  5(3Q29) MUTATED" 
                 TCGA-CS-6667                  TCGA-CS-6668 
"DEL PEAK  5(3Q29) WILD-TYPE" "DEL PEAK  5(3Q29) WILD-TYPE" 
                 TCGA-CS-6669                  TCGA-CS-6670 
"DEL PEAK  5(3Q29) WILD-TYPE" "DEL PEAK  5(3Q29) WILD-TYPE" 
                 TCGA-DB-5270                  TCGA-DB-5273 
"DEL PEAK  5(3Q29) WILD-TYPE" "DEL PEAK  5(3Q29) WILD-TYPE" 
                 TCGA-DB-5274                  TCGA-DB-5275 
"DEL PEAK  5(3Q29) WILD-TYPE" "DEL PEAK  5(3Q29) WILD-TYPE" 
                 TCGA-DB-5276                  TCGA-DB-5277 
"DEL PEAK  5(3Q29) WILD-TYPE"   "DEL PEAK  5(3Q29) MUTATED" 
                 TCGA-DB-5278                  TCGA-DB-5279 
"DEL PEAK  5(3Q29) WILD-TYPE" "DEL PEAK  5(3Q29) WILD-TYPE" 
                 TCGA-DB-5280                  TCGA-DB-5281 
"DEL PEAK  5(3Q29) WILD-TYPE"   "DEL PEAK  5(3Q29) MUTATED" 
                 TCGA-DH-5140                  TCGA-DH-5141 
"DEL PEAK  5(3Q29) WILD-TYPE" "DEL PEAK  5(3Q29) WILD-TYPE" 
                 TCGA-DH-5142                  TCGA-DH-5143 
"DEL PEAK  5(3Q29) WILD-TYPE" "DEL PEAK  5(3Q29) WILD-TYPE" 
                 TCGA-DH-5144                  TCGA-DU-5847 
"DEL PEAK  5(3Q29) WILD-TYPE" "DEL PEAK  5(3Q29) WILD-TYPE" 
                 TCGA-DU-5849                  TCGA-DU-5851 
"DEL PEAK  5(3Q29) WILD-TYPE" "DEL PEAK  5(3Q29) WILD-TYPE" 
                 TCGA-DU-5852                  TCGA-DU-5853 
"DEL PEAK  5(3Q29) WILD-TYPE" "DEL PEAK  5(3Q29) WILD-TYPE" 
                 TCGA-DU-5854                  TCGA-DU-5855 
"DEL PEAK  5(3Q29) WILD-TYPE" "DEL PEAK  5(3Q29) WILD-TYPE" 
                 TCGA-DU-5870                  TCGA-DU-5871 
"DEL PEAK  5(3Q29) WILD-TYPE" "DEL PEAK  5(3Q29) WILD-TYPE" 
                 TCGA-DU-5872                  TCGA-DU-5874 
"DEL PEAK  5(3Q29) WILD-TYPE" "DEL PEAK  5(3Q29) WILD-TYPE" 
                 TCGA-DU-6392                  TCGA-DU-6393 
"DEL PEAK  5(3Q29) WILD-TYPE" "DEL PEAK  5(3Q29) WILD-TYPE" 
                 TCGA-DU-6394                  TCGA-DU-6395 
"DEL PEAK  5(3Q29) WILD-TYPE"   "DEL PEAK  5(3Q29) MUTATED" 
                 TCGA-DU-6396                  TCGA-DU-6397 
"DEL PEAK  5(3Q29) WILD-TYPE" "DEL PEAK  5(3Q29) WILD-TYPE" 
                 TCGA-DU-6399                  TCGA-DU-6400 
"DEL PEAK  5(3Q29) WILD-TYPE" "DEL PEAK  5(3Q29) WILD-TYPE" 
                 TCGA-DU-6401                  TCGA-DU-6402 
"DEL PEAK  5(3Q29) WILD-TYPE" "DEL PEAK  5(3Q29) WILD-TYPE" 
                 TCGA-DU-6403                  TCGA-DU-6404 
"DEL PEAK  5(3Q29) WILD-TYPE" "DEL PEAK  5(3Q29) WILD-TYPE" 
                 TCGA-DU-6405                  TCGA-DU-6406 
"DEL PEAK  5(3Q29) WILD-TYPE" "DEL PEAK  5(3Q29) WILD-TYPE" 
                 TCGA-DU-6407                  TCGA-DU-6408 
"DEL PEAK  5(3Q29) WILD-TYPE" "DEL PEAK  5(3Q29) WILD-TYPE" 
                 TCGA-DU-6410                  TCGA-DU-6542 
"DEL PEAK  5(3Q29) WILD-TYPE" "DEL PEAK  5(3Q29) WILD-TYPE" 
                 TCGA-DU-7006                  TCGA-DU-7007 
"DEL PEAK  5(3Q29) WILD-TYPE"   "DEL PEAK  5(3Q29) MUTATED" 
                 TCGA-DU-7008                  TCGA-DU-7009 
"DEL PEAK  5(3Q29) WILD-TYPE" "DEL PEAK  5(3Q29) WILD-TYPE" 
                 TCGA-DU-7010                  TCGA-DU-7011 
  "DEL PEAK  5(3Q29) MUTATED" "DEL PEAK  5(3Q29) WILD-TYPE" 
                 TCGA-DU-7012                  TCGA-DU-7013 
"DEL PEAK  5(3Q29) WILD-TYPE" "DEL PEAK  5(3Q29) WILD-TYPE" 
                 TCGA-DU-7014                  TCGA-DU-7015 
  "DEL PEAK  5(3Q29) MUTATED" "DEL PEAK  5(3Q29) WILD-TYPE" 
                 TCGA-DU-7018                  TCGA-DU-7019 
"DEL PEAK  5(3Q29) WILD-TYPE" "DEL PEAK  5(3Q29) WILD-TYPE" 
                 TCGA-DU-7290                  TCGA-DU-7292 
"DEL PEAK  5(3Q29) WILD-TYPE" "DEL PEAK  5(3Q29) WILD-TYPE" 
                 TCGA-DU-7294                  TCGA-DU-7298 
"DEL PEAK  5(3Q29) WILD-TYPE"   "DEL PEAK  5(3Q29) MUTATED" 
                 TCGA-DU-7299                  TCGA-DU-7300 
"DEL PEAK  5(3Q29) WILD-TYPE"   "DEL PEAK  5(3Q29) MUTATED" 
                 TCGA-DU-7301                  TCGA-DU-7302 
"DEL PEAK  5(3Q29) WILD-TYPE" "DEL PEAK  5(3Q29) WILD-TYPE" 
                 TCGA-DU-7304                  TCGA-DU-7306 
"DEL PEAK  5(3Q29) WILD-TYPE" "DEL PEAK  5(3Q29) WILD-TYPE" 
                 TCGA-DU-7309                  TCGA-E1-5302 
"DEL PEAK  5(3Q29) WILD-TYPE"   "DEL PEAK  5(3Q29) MUTATED" 
                 TCGA-E1-5303                  TCGA-E1-5304 
"DEL PEAK  5(3Q29) WILD-TYPE" "DEL PEAK  5(3Q29) WILD-TYPE" 
                 TCGA-E1-5305                  TCGA-E1-5307 
"DEL PEAK  5(3Q29) WILD-TYPE" "DEL PEAK  5(3Q29) WILD-TYPE" 
                 TCGA-E1-5311                  TCGA-E1-5318 
"DEL PEAK  5(3Q29) WILD-TYPE" "DEL PEAK  5(3Q29) WILD-TYPE" 
                 TCGA-E1-5319                  TCGA-E1-5322 
"DEL PEAK  5(3Q29) WILD-TYPE" "DEL PEAK  5(3Q29) WILD-TYPE" 
                 TCGA-EZ-7264                  TCGA-FG-5962 
"DEL PEAK  5(3Q29) WILD-TYPE" "DEL PEAK  5(3Q29) WILD-TYPE" 
                 TCGA-FG-5963                  TCGA-FG-5964 
  "DEL PEAK  5(3Q29) MUTATED" "DEL PEAK  5(3Q29) WILD-TYPE" 
                 TCGA-FG-5965                  TCGA-FG-6688 
"DEL PEAK  5(3Q29) WILD-TYPE" "DEL PEAK  5(3Q29) WILD-TYPE" 
                 TCGA-FG-6689                  TCGA-FG-6690 
"DEL PEAK  5(3Q29) WILD-TYPE" "DEL PEAK  5(3Q29) WILD-TYPE" 
                 TCGA-FG-6691                  TCGA-FG-6692 
  "DEL PEAK  5(3Q29) MUTATED" "DEL PEAK  5(3Q29) WILD-TYPE" 
                 TCGA-FG-7634                  TCGA-FG-7636 
"DEL PEAK  5(3Q29) WILD-TYPE" "DEL PEAK  5(3Q29) WILD-TYPE" 
                 TCGA-FG-7638                  TCGA-FG-7643 
"DEL PEAK  5(3Q29) WILD-TYPE" "DEL PEAK  5(3Q29) WILD-TYPE" 
                 TCGA-FN-7833                  TCGA-HT-7467 
"DEL PEAK  5(3Q29) WILD-TYPE" "DEL PEAK  5(3Q29) WILD-TYPE" 
                 TCGA-HT-7468                  TCGA-HT-7470 
"DEL PEAK  5(3Q29) WILD-TYPE"   "DEL PEAK  5(3Q29) MUTATED" 
                 TCGA-HT-7472                  TCGA-HT-7473 
  "DEL PEAK  5(3Q29) MUTATED" "DEL PEAK  5(3Q29) WILD-TYPE" 
                 TCGA-HT-7474                  TCGA-HT-7475 
"DEL PEAK  5(3Q29) WILD-TYPE" "DEL PEAK  5(3Q29) WILD-TYPE" 
                 TCGA-HT-7476                  TCGA-HT-7478 
"DEL PEAK  5(3Q29) WILD-TYPE" "DEL PEAK  5(3Q29) WILD-TYPE" 
                 TCGA-HT-7479                  TCGA-HT-7480 
"DEL PEAK  5(3Q29) WILD-TYPE" "DEL PEAK  5(3Q29) WILD-TYPE" 
                 TCGA-HT-7481                  TCGA-HT-7482 
"DEL PEAK  5(3Q29) WILD-TYPE" "DEL PEAK  5(3Q29) WILD-TYPE" 
                 TCGA-HT-7483                  TCGA-HT-7485 
"DEL PEAK  5(3Q29) WILD-TYPE" "DEL PEAK  5(3Q29) WILD-TYPE" 
                 TCGA-HT-7601                  TCGA-HT-7602 
"DEL PEAK  5(3Q29) WILD-TYPE" "DEL PEAK  5(3Q29) WILD-TYPE" 
                 TCGA-HT-7603                  TCGA-HT-7604 
"DEL PEAK  5(3Q29) WILD-TYPE"   "DEL PEAK  5(3Q29) MUTATED" 
                 TCGA-HT-7605                  TCGA-HT-7606 
"DEL PEAK  5(3Q29) WILD-TYPE" "DEL PEAK  5(3Q29) WILD-TYPE" 
                 TCGA-HT-7607                  TCGA-HT-7608 
"DEL PEAK  5(3Q29) WILD-TYPE" "DEL PEAK  5(3Q29) WILD-TYPE" 
                 TCGA-HT-7609                  TCGA-HT-7610 
"DEL PEAK  5(3Q29) WILD-TYPE" "DEL PEAK  5(3Q29) WILD-TYPE" 
                 TCGA-HW-7486                  TCGA-HW-7487 
"DEL PEAK  5(3Q29) WILD-TYPE" "DEL PEAK  5(3Q29) WILD-TYPE" 
                 TCGA-HW-7489                  TCGA-HW-7490 
"DEL PEAK  5(3Q29) WILD-TYPE" "DEL PEAK  5(3Q29) WILD-TYPE" 
                 TCGA-HW-7491                  TCGA-HW-7493 
"DEL PEAK  5(3Q29) WILD-TYPE" "DEL PEAK  5(3Q29) WILD-TYPE" 
                 TCGA-HW-7495                  TCGA-IK-7675 
"DEL PEAK  5(3Q29) WILD-TYPE"   "DEL PEAK  5(3Q29) MUTATED" 
                 TCGA-IK-8125 
"DEL PEAK  5(3Q29) WILD-TYPE" 
[1] "hr=" "1.4"
D19V2, continuous
D19V3, binary
[1] "tbl2"
                             cls
clus                          [,1] [,2]
  DEL PEAK  5(3Q29) MUTATED      4   13
  DEL PEAK  5(3Q29) WILD-TYPE   58   70
        clus
vv       DEL PEAK  5(3Q29) MUTATED DEL PEAK  5(3Q29) WILD-TYPE
  FEMALE                         4                          58
  MALE                          13                          70
D19V4, continuous
D19V5, multiclass
                   clus
vv                  DEL PEAK  5(3Q29) MUTATED DEL PEAK  5(3Q29) WILD-TYPE
  ASTROCYTOMA                              10                          40
  OLIGOASTROCYTOMA                          2                          34
  OLIGODENDROGLIOMA                         5                          53
D19V6, binary
[1] "tbl2"
                             cls
clus                          [,1] [,2]
  DEL PEAK  5(3Q29) MUTATED      6   11
  DEL PEAK  5(3Q29) WILD-TYPE   53   75
     clus
vv    DEL PEAK  5(3Q29) MUTATED DEL PEAK  5(3Q29) WILD-TYPE
  NO                         11                          75
  YES                         6                          53
D19V7, binary
[1] "tbl2"
                             cls
clus                          [,1] [,2]
  DEL PEAK  5(3Q29) MUTATED      8    9
  DEL PEAK  5(3Q29) WILD-TYPE   66   62
     clus
vv    DEL PEAK  5(3Q29) MUTATED DEL PEAK  5(3Q29) WILD-TYPE
  NO                          9                          62
  YES                         8                          66

Clustering(20) Variable = Del Peak  6(4q34.1) mutation analysis
D20V1, survival
                   TCGA-CS-4938                    TCGA-CS-4941 
"DEL PEAK  6(4Q34.1) WILD-TYPE" "DEL PEAK  6(4Q34.1) WILD-TYPE" 
                   TCGA-CS-4942                    TCGA-CS-4943 
"DEL PEAK  6(4Q34.1) WILD-TYPE"   "DEL PEAK  6(4Q34.1) MUTATED" 
                   TCGA-CS-4944                    TCGA-CS-5390 
"DEL PEAK  6(4Q34.1) WILD-TYPE"   "DEL PEAK  6(4Q34.1) MUTATED" 
                   TCGA-CS-5393                    TCGA-CS-5394 
"DEL PEAK  6(4Q34.1) WILD-TYPE" "DEL PEAK  6(4Q34.1) WILD-TYPE" 
                   TCGA-CS-5395                    TCGA-CS-5396 
"DEL PEAK  6(4Q34.1) WILD-TYPE" "DEL PEAK  6(4Q34.1) WILD-TYPE" 
                   TCGA-CS-5397                    TCGA-CS-6186 
"DEL PEAK  6(4Q34.1) WILD-TYPE" "DEL PEAK  6(4Q34.1) WILD-TYPE" 
                   TCGA-CS-6188                    TCGA-CS-6290 
"DEL PEAK  6(4Q34.1) WILD-TYPE" "DEL PEAK  6(4Q34.1) WILD-TYPE" 
                   TCGA-CS-6665                    TCGA-CS-6666 
"DEL PEAK  6(4Q34.1) WILD-TYPE" "DEL PEAK  6(4Q34.1) WILD-TYPE" 
                   TCGA-CS-6667                    TCGA-CS-6668 
  "DEL PEAK  6(4Q34.1) MUTATED" "DEL PEAK  6(4Q34.1) WILD-TYPE" 
                   TCGA-CS-6669                    TCGA-CS-6670 
"DEL PEAK  6(4Q34.1) WILD-TYPE" "DEL PEAK  6(4Q34.1) WILD-TYPE" 
                   TCGA-DB-5270                    TCGA-DB-5273 
"DEL PEAK  6(4Q34.1) WILD-TYPE" "DEL PEAK  6(4Q34.1) WILD-TYPE" 
                   TCGA-DB-5274                    TCGA-DB-5275 
  "DEL PEAK  6(4Q34.1) MUTATED"   "DEL PEAK  6(4Q34.1) MUTATED" 
                   TCGA-DB-5276                    TCGA-DB-5277 
"DEL PEAK  6(4Q34.1) WILD-TYPE"   "DEL PEAK  6(4Q34.1) MUTATED" 
                   TCGA-DB-5278                    TCGA-DB-5279 
"DEL PEAK  6(4Q34.1) WILD-TYPE"   "DEL PEAK  6(4Q34.1) MUTATED" 
                   TCGA-DB-5280                    TCGA-DB-5281 
"DEL PEAK  6(4Q34.1) WILD-TYPE"   "DEL PEAK  6(4Q34.1) MUTATED" 
                   TCGA-DH-5140                    TCGA-DH-5141 
"DEL PEAK  6(4Q34.1) WILD-TYPE" "DEL PEAK  6(4Q34.1) WILD-TYPE" 
                   TCGA-DH-5142                    TCGA-DH-5143 
"DEL PEAK  6(4Q34.1) WILD-TYPE" "DEL PEAK  6(4Q34.1) WILD-TYPE" 
                   TCGA-DH-5144                    TCGA-DU-5847 
"DEL PEAK  6(4Q34.1) WILD-TYPE" "DEL PEAK  6(4Q34.1) WILD-TYPE" 
                   TCGA-DU-5849                    TCGA-DU-5851 
"DEL PEAK  6(4Q34.1) WILD-TYPE"   "DEL PEAK  6(4Q34.1) MUTATED" 
                   TCGA-DU-5852                    TCGA-DU-5853 
"DEL PEAK  6(4Q34.1) WILD-TYPE"   "DEL PEAK  6(4Q34.1) MUTATED" 
                   TCGA-DU-5854                    TCGA-DU-5855 
"DEL PEAK  6(4Q34.1) WILD-TYPE" "DEL PEAK  6(4Q34.1) WILD-TYPE" 
                   TCGA-DU-5870                    TCGA-DU-5871 
"DEL PEAK  6(4Q34.1) WILD-TYPE"   "DEL PEAK  6(4Q34.1) MUTATED" 
                   TCGA-DU-5872                    TCGA-DU-5874 
"DEL PEAK  6(4Q34.1) WILD-TYPE"   "DEL PEAK  6(4Q34.1) MUTATED" 
                   TCGA-DU-6392                    TCGA-DU-6393 
"DEL PEAK  6(4Q34.1) WILD-TYPE" "DEL PEAK  6(4Q34.1) WILD-TYPE" 
                   TCGA-DU-6394                    TCGA-DU-6395 
"DEL PEAK  6(4Q34.1) WILD-TYPE" "DEL PEAK  6(4Q34.1) WILD-TYPE" 
                   TCGA-DU-6396                    TCGA-DU-6397 
"DEL PEAK  6(4Q34.1) WILD-TYPE" "DEL PEAK  6(4Q34.1) WILD-TYPE" 
                   TCGA-DU-6399                    TCGA-DU-6400 
  "DEL PEAK  6(4Q34.1) MUTATED"   "DEL PEAK  6(4Q34.1) MUTATED" 
                   TCGA-DU-6401                    TCGA-DU-6402 
"DEL PEAK  6(4Q34.1) WILD-TYPE" "DEL PEAK  6(4Q34.1) WILD-TYPE" 
                   TCGA-DU-6403                    TCGA-DU-6404 
"DEL PEAK  6(4Q34.1) WILD-TYPE" "DEL PEAK  6(4Q34.1) WILD-TYPE" 
                   TCGA-DU-6405                    TCGA-DU-6406 
  "DEL PEAK  6(4Q34.1) MUTATED" "DEL PEAK  6(4Q34.1) WILD-TYPE" 
                   TCGA-DU-6407                    TCGA-DU-6408 
"DEL PEAK  6(4Q34.1) WILD-TYPE" "DEL PEAK  6(4Q34.1) WILD-TYPE" 
                   TCGA-DU-6410                    TCGA-DU-6542 
  "DEL PEAK  6(4Q34.1) MUTATED" "DEL PEAK  6(4Q34.1) WILD-TYPE" 
                   TCGA-DU-7006                    TCGA-DU-7007 
"DEL PEAK  6(4Q34.1) WILD-TYPE"   "DEL PEAK  6(4Q34.1) MUTATED" 
                   TCGA-DU-7008                    TCGA-DU-7009 
  "DEL PEAK  6(4Q34.1) MUTATED" "DEL PEAK  6(4Q34.1) WILD-TYPE" 
                   TCGA-DU-7010                    TCGA-DU-7011 
  "DEL PEAK  6(4Q34.1) MUTATED" "DEL PEAK  6(4Q34.1) WILD-TYPE" 
                   TCGA-DU-7012                    TCGA-DU-7013 
"DEL PEAK  6(4Q34.1) WILD-TYPE" "DEL PEAK  6(4Q34.1) WILD-TYPE" 
                   TCGA-DU-7014                    TCGA-DU-7015 
"DEL PEAK  6(4Q34.1) WILD-TYPE" "DEL PEAK  6(4Q34.1) WILD-TYPE" 
                   TCGA-DU-7018                    TCGA-DU-7019 
  "DEL PEAK  6(4Q34.1) MUTATED" "DEL PEAK  6(4Q34.1) WILD-TYPE" 
                   TCGA-DU-7290                    TCGA-DU-7292 
"DEL PEAK  6(4Q34.1) WILD-TYPE" "DEL PEAK  6(4Q34.1) WILD-TYPE" 
                   TCGA-DU-7294                    TCGA-DU-7298 
  "DEL PEAK  6(4Q34.1) MUTATED" "DEL PEAK  6(4Q34.1) WILD-TYPE" 
                   TCGA-DU-7299                    TCGA-DU-7300 
  "DEL PEAK  6(4Q34.1) MUTATED" "DEL PEAK  6(4Q34.1) WILD-TYPE" 
                   TCGA-DU-7301                    TCGA-DU-7302 
  "DEL PEAK  6(4Q34.1) MUTATED"   "DEL PEAK  6(4Q34.1) MUTATED" 
                   TCGA-DU-7304                    TCGA-DU-7306 
"DEL PEAK  6(4Q34.1) WILD-TYPE" "DEL PEAK  6(4Q34.1) WILD-TYPE" 
                   TCGA-DU-7309                    TCGA-E1-5302 
  "DEL PEAK  6(4Q34.1) MUTATED"   "DEL PEAK  6(4Q34.1) MUTATED" 
                   TCGA-E1-5303                    TCGA-E1-5304 
  "DEL PEAK  6(4Q34.1) MUTATED"   "DEL PEAK  6(4Q34.1) MUTATED" 
                   TCGA-E1-5305                    TCGA-E1-5307 
  "DEL PEAK  6(4Q34.1) MUTATED" "DEL PEAK  6(4Q34.1) WILD-TYPE" 
                   TCGA-E1-5311                    TCGA-E1-5318 
  "DEL PEAK  6(4Q34.1) MUTATED" "DEL PEAK  6(4Q34.1) WILD-TYPE" 
                   TCGA-E1-5319                    TCGA-E1-5322 
"DEL PEAK  6(4Q34.1) WILD-TYPE"   "DEL PEAK  6(4Q34.1) MUTATED" 
                   TCGA-EZ-7264                    TCGA-FG-5962 
  "DEL PEAK  6(4Q34.1) MUTATED"   "DEL PEAK  6(4Q34.1) MUTATED" 
                   TCGA-FG-5963                    TCGA-FG-5964 
  "DEL PEAK  6(4Q34.1) MUTATED"   "DEL PEAK  6(4Q34.1) MUTATED" 
                   TCGA-FG-5965                    TCGA-FG-6688 
"DEL PEAK  6(4Q34.1) WILD-TYPE" "DEL PEAK  6(4Q34.1) WILD-TYPE" 
                   TCGA-FG-6689                    TCGA-FG-6690 
"DEL PEAK  6(4Q34.1) WILD-TYPE" "DEL PEAK  6(4Q34.1) WILD-TYPE" 
                   TCGA-FG-6691                    TCGA-FG-6692 
"DEL PEAK  6(4Q34.1) WILD-TYPE" "DEL PEAK  6(4Q34.1) WILD-TYPE" 
                   TCGA-FG-7634                    TCGA-FG-7636 
"DEL PEAK  6(4Q34.1) WILD-TYPE"   "DEL PEAK  6(4Q34.1) MUTATED" 
                   TCGA-FG-7638                    TCGA-FG-7643 
  "DEL PEAK  6(4Q34.1) MUTATED" "DEL PEAK  6(4Q34.1) WILD-TYPE" 
                   TCGA-FN-7833                    TCGA-HT-7467 
"DEL PEAK  6(4Q34.1) WILD-TYPE"   "DEL PEAK  6(4Q34.1) MUTATED" 
                   TCGA-HT-7468                    TCGA-HT-7470 
  "DEL PEAK  6(4Q34.1) MUTATED" "DEL PEAK  6(4Q34.1) WILD-TYPE" 
                   TCGA-HT-7472                    TCGA-HT-7473 
"DEL PEAK  6(4Q34.1) WILD-TYPE"   "DEL PEAK  6(4Q34.1) MUTATED" 
                   TCGA-HT-7474                    TCGA-HT-7475 
"DEL PEAK  6(4Q34.1) WILD-TYPE" "DEL PEAK  6(4Q34.1) WILD-TYPE" 
                   TCGA-HT-7476                    TCGA-HT-7478 
  "DEL PEAK  6(4Q34.1) MUTATED" "DEL PEAK  6(4Q34.1) WILD-TYPE" 
                   TCGA-HT-7479                    TCGA-HT-7480 
"DEL PEAK  6(4Q34.1) WILD-TYPE"   "DEL PEAK  6(4Q34.1) MUTATED" 
                   TCGA-HT-7481                    TCGA-HT-7482 
"DEL PEAK  6(4Q34.1) WILD-TYPE" "DEL PEAK  6(4Q34.1) WILD-TYPE" 
                   TCGA-HT-7483                    TCGA-HT-7485 
"DEL PEAK  6(4Q34.1) WILD-TYPE" "DEL PEAK  6(4Q34.1) WILD-TYPE" 
                   TCGA-HT-7601                    TCGA-HT-7602 
"DEL PEAK  6(4Q34.1) WILD-TYPE" "DEL PEAK  6(4Q34.1) WILD-TYPE" 
                   TCGA-HT-7603                    TCGA-HT-7604 
"DEL PEAK  6(4Q34.1) WILD-TYPE" "DEL PEAK  6(4Q34.1) WILD-TYPE" 
                   TCGA-HT-7605                    TCGA-HT-7606 
"DEL PEAK  6(4Q34.1) WILD-TYPE" "DEL PEAK  6(4Q34.1) WILD-TYPE" 
                   TCGA-HT-7607                    TCGA-HT-7608 
"DEL PEAK  6(4Q34.1) WILD-TYPE" "DEL PEAK  6(4Q34.1) WILD-TYPE" 
                   TCGA-HT-7609                    TCGA-HT-7610 
"DEL PEAK  6(4Q34.1) WILD-TYPE" "DEL PEAK  6(4Q34.1) WILD-TYPE" 
                   TCGA-HW-7486                    TCGA-HW-7487 
"DEL PEAK  6(4Q34.1) WILD-TYPE"   "DEL PEAK  6(4Q34.1) MUTATED" 
                   TCGA-HW-7489                    TCGA-HW-7490 
  "DEL PEAK  6(4Q34.1) MUTATED" "DEL PEAK  6(4Q34.1) WILD-TYPE" 
                   TCGA-HW-7491                    TCGA-HW-7493 
  "DEL PEAK  6(4Q34.1) MUTATED"   "DEL PEAK  6(4Q34.1) MUTATED" 
                   TCGA-HW-7495                    TCGA-IK-7675 
"DEL PEAK  6(4Q34.1) WILD-TYPE"   "DEL PEAK  6(4Q34.1) MUTATED" 
                   TCGA-IK-8125 
  "DEL PEAK  6(4Q34.1) MUTATED" 
                   TCGA-CS-4938                    TCGA-CS-4941 
"DEL PEAK  6(4Q34.1) WILD-TYPE" "DEL PEAK  6(4Q34.1) WILD-TYPE" 
                   TCGA-CS-4942                    TCGA-CS-4943 
"DEL PEAK  6(4Q34.1) WILD-TYPE"   "DEL PEAK  6(4Q34.1) MUTATED" 
                   TCGA-CS-4944                    TCGA-CS-5390 
"DEL PEAK  6(4Q34.1) WILD-TYPE"   "DEL PEAK  6(4Q34.1) MUTATED" 
                   TCGA-CS-5393                    TCGA-CS-5394 
"DEL PEAK  6(4Q34.1) WILD-TYPE" "DEL PEAK  6(4Q34.1) WILD-TYPE" 
                   TCGA-CS-5395                    TCGA-CS-5396 
"DEL PEAK  6(4Q34.1) WILD-TYPE" "DEL PEAK  6(4Q34.1) WILD-TYPE" 
                   TCGA-CS-5397                    TCGA-CS-6186 
"DEL PEAK  6(4Q34.1) WILD-TYPE" "DEL PEAK  6(4Q34.1) WILD-TYPE" 
                   TCGA-CS-6188                    TCGA-CS-6290 
"DEL PEAK  6(4Q34.1) WILD-TYPE" "DEL PEAK  6(4Q34.1) WILD-TYPE" 
                   TCGA-CS-6665                    TCGA-CS-6666 
"DEL PEAK  6(4Q34.1) WILD-TYPE" "DEL PEAK  6(4Q34.1) WILD-TYPE" 
                   TCGA-CS-6667                    TCGA-CS-6668 
  "DEL PEAK  6(4Q34.1) MUTATED" "DEL PEAK  6(4Q34.1) WILD-TYPE" 
                   TCGA-CS-6669                    TCGA-CS-6670 
"DEL PEAK  6(4Q34.1) WILD-TYPE" "DEL PEAK  6(4Q34.1) WILD-TYPE" 
                   TCGA-DB-5270                    TCGA-DB-5273 
"DEL PEAK  6(4Q34.1) WILD-TYPE" "DEL PEAK  6(4Q34.1) WILD-TYPE" 
                   TCGA-DB-5274                    TCGA-DB-5275 
  "DEL PEAK  6(4Q34.1) MUTATED"   "DEL PEAK  6(4Q34.1) MUTATED" 
                   TCGA-DB-5276                    TCGA-DB-5277 
"DEL PEAK  6(4Q34.1) WILD-TYPE"   "DEL PEAK  6(4Q34.1) MUTATED" 
                   TCGA-DB-5278                    TCGA-DB-5279 
"DEL PEAK  6(4Q34.1) WILD-TYPE"   "DEL PEAK  6(4Q34.1) MUTATED" 
                   TCGA-DB-5280                    TCGA-DB-5281 
"DEL PEAK  6(4Q34.1) WILD-TYPE"   "DEL PEAK  6(4Q34.1) MUTATED" 
                   TCGA-DH-5140                    TCGA-DH-5141 
"DEL PEAK  6(4Q34.1) WILD-TYPE" "DEL PEAK  6(4Q34.1) WILD-TYPE" 
                   TCGA-DH-5142                    TCGA-DH-5143 
"DEL PEAK  6(4Q34.1) WILD-TYPE" "DEL PEAK  6(4Q34.1) WILD-TYPE" 
                   TCGA-DH-5144                    TCGA-DU-5847 
"DEL PEAK  6(4Q34.1) WILD-TYPE" "DEL PEAK  6(4Q34.1) WILD-TYPE" 
                   TCGA-DU-5849                    TCGA-DU-5851 
"DEL PEAK  6(4Q34.1) WILD-TYPE"   "DEL PEAK  6(4Q34.1) MUTATED" 
                   TCGA-DU-5852                    TCGA-DU-5853 
"DEL PEAK  6(4Q34.1) WILD-TYPE"   "DEL PEAK  6(4Q34.1) MUTATED" 
                   TCGA-DU-5854                    TCGA-DU-5855 
"DEL PEAK  6(4Q34.1) WILD-TYPE" "DEL PEAK  6(4Q34.1) WILD-TYPE" 
                   TCGA-DU-5870                    TCGA-DU-5871 
"DEL PEAK  6(4Q34.1) WILD-TYPE"   "DEL PEAK  6(4Q34.1) MUTATED" 
                   TCGA-DU-5872                    TCGA-DU-5874 
"DEL PEAK  6(4Q34.1) WILD-TYPE"   "DEL PEAK  6(4Q34.1) MUTATED" 
                   TCGA-DU-6392                    TCGA-DU-6393 
"DEL PEAK  6(4Q34.1) WILD-TYPE" "DEL PEAK  6(4Q34.1) WILD-TYPE" 
                   TCGA-DU-6394                    TCGA-DU-6395 
"DEL PEAK  6(4Q34.1) WILD-TYPE" "DEL PEAK  6(4Q34.1) WILD-TYPE" 
                   TCGA-DU-6396                    TCGA-DU-6397 
"DEL PEAK  6(4Q34.1) WILD-TYPE" "DEL PEAK  6(4Q34.1) WILD-TYPE" 
                   TCGA-DU-6399                    TCGA-DU-6400 
  "DEL PEAK  6(4Q34.1) MUTATED"   "DEL PEAK  6(4Q34.1) MUTATED" 
                   TCGA-DU-6401                    TCGA-DU-6402 
"DEL PEAK  6(4Q34.1) WILD-TYPE" "DEL PEAK  6(4Q34.1) WILD-TYPE" 
                   TCGA-DU-6403                    TCGA-DU-6404 
"DEL PEAK  6(4Q34.1) WILD-TYPE" "DEL PEAK  6(4Q34.1) WILD-TYPE" 
                   TCGA-DU-6405                    TCGA-DU-6406 
  "DEL PEAK  6(4Q34.1) MUTATED" "DEL PEAK  6(4Q34.1) WILD-TYPE" 
                   TCGA-DU-6407                    TCGA-DU-6408 
"DEL PEAK  6(4Q34.1) WILD-TYPE" "DEL PEAK  6(4Q34.1) WILD-TYPE" 
                   TCGA-DU-6410                    TCGA-DU-6542 
  "DEL PEAK  6(4Q34.1) MUTATED" "DEL PEAK  6(4Q34.1) WILD-TYPE" 
                   TCGA-DU-7006                    TCGA-DU-7007 
"DEL PEAK  6(4Q34.1) WILD-TYPE"   "DEL PEAK  6(4Q34.1) MUTATED" 
                   TCGA-DU-7008                    TCGA-DU-7009 
  "DEL PEAK  6(4Q34.1) MUTATED" "DEL PEAK  6(4Q34.1) WILD-TYPE" 
                   TCGA-DU-7010                    TCGA-DU-7011 
  "DEL PEAK  6(4Q34.1) MUTATED" "DEL PEAK  6(4Q34.1) WILD-TYPE" 
                   TCGA-DU-7012                    TCGA-DU-7013 
"DEL PEAK  6(4Q34.1) WILD-TYPE" "DEL PEAK  6(4Q34.1) WILD-TYPE" 
                   TCGA-DU-7014                    TCGA-DU-7015 
"DEL PEAK  6(4Q34.1) WILD-TYPE" "DEL PEAK  6(4Q34.1) WILD-TYPE" 
                   TCGA-DU-7018                    TCGA-DU-7019 
  "DEL PEAK  6(4Q34.1) MUTATED" "DEL PEAK  6(4Q34.1) WILD-TYPE" 
                   TCGA-DU-7290                    TCGA-DU-7292 
"DEL PEAK  6(4Q34.1) WILD-TYPE" "DEL PEAK  6(4Q34.1) WILD-TYPE" 
                   TCGA-DU-7294                    TCGA-DU-7298 
  "DEL PEAK  6(4Q34.1) MUTATED" "DEL PEAK  6(4Q34.1) WILD-TYPE" 
                   TCGA-DU-7299                    TCGA-DU-7300 
  "DEL PEAK  6(4Q34.1) MUTATED" "DEL PEAK  6(4Q34.1) WILD-TYPE" 
                   TCGA-DU-7301                    TCGA-DU-7302 
  "DEL PEAK  6(4Q34.1) MUTATED"   "DEL PEAK  6(4Q34.1) MUTATED" 
                   TCGA-DU-7304                    TCGA-DU-7306 
"DEL PEAK  6(4Q34.1) WILD-TYPE" "DEL PEAK  6(4Q34.1) WILD-TYPE" 
                   TCGA-DU-7309                    TCGA-E1-5302 
  "DEL PEAK  6(4Q34.1) MUTATED"   "DEL PEAK  6(4Q34.1) MUTATED" 
                   TCGA-E1-5303                    TCGA-E1-5304 
  "DEL PEAK  6(4Q34.1) MUTATED"   "DEL PEAK  6(4Q34.1) MUTATED" 
                   TCGA-E1-5305                    TCGA-E1-5307 
  "DEL PEAK  6(4Q34.1) MUTATED" "DEL PEAK  6(4Q34.1) WILD-TYPE" 
                   TCGA-E1-5311                    TCGA-E1-5318 
  "DEL PEAK  6(4Q34.1) MUTATED" "DEL PEAK  6(4Q34.1) WILD-TYPE" 
                   TCGA-E1-5319                    TCGA-E1-5322 
"DEL PEAK  6(4Q34.1) WILD-TYPE"   "DEL PEAK  6(4Q34.1) MUTATED" 
                   TCGA-EZ-7264                    TCGA-FG-5962 
  "DEL PEAK  6(4Q34.1) MUTATED"   "DEL PEAK  6(4Q34.1) MUTATED" 
                   TCGA-FG-5963                    TCGA-FG-5964 
  "DEL PEAK  6(4Q34.1) MUTATED"   "DEL PEAK  6(4Q34.1) MUTATED" 
                   TCGA-FG-5965                    TCGA-FG-6688 
"DEL PEAK  6(4Q34.1) WILD-TYPE" "DEL PEAK  6(4Q34.1) WILD-TYPE" 
                   TCGA-FG-6689                    TCGA-FG-6690 
"DEL PEAK  6(4Q34.1) WILD-TYPE" "DEL PEAK  6(4Q34.1) WILD-TYPE" 
                   TCGA-FG-6691                    TCGA-FG-6692 
"DEL PEAK  6(4Q34.1) WILD-TYPE" "DEL PEAK  6(4Q34.1) WILD-TYPE" 
                   TCGA-FG-7634                    TCGA-FG-7636 
"DEL PEAK  6(4Q34.1) WILD-TYPE"   "DEL PEAK  6(4Q34.1) MUTATED" 
                   TCGA-FG-7638                    TCGA-FG-7643 
  "DEL PEAK  6(4Q34.1) MUTATED" "DEL PEAK  6(4Q34.1) WILD-TYPE" 
                   TCGA-FN-7833                    TCGA-HT-7467 
"DEL PEAK  6(4Q34.1) WILD-TYPE"   "DEL PEAK  6(4Q34.1) MUTATED" 
                   TCGA-HT-7468                    TCGA-HT-7470 
  "DEL PEAK  6(4Q34.1) MUTATED" "DEL PEAK  6(4Q34.1) WILD-TYPE" 
                   TCGA-HT-7472                    TCGA-HT-7473 
"DEL PEAK  6(4Q34.1) WILD-TYPE"   "DEL PEAK  6(4Q34.1) MUTATED" 
                   TCGA-HT-7474                    TCGA-HT-7475 
"DEL PEAK  6(4Q34.1) WILD-TYPE" "DEL PEAK  6(4Q34.1) WILD-TYPE" 
                   TCGA-HT-7476                    TCGA-HT-7478 
  "DEL PEAK  6(4Q34.1) MUTATED" "DEL PEAK  6(4Q34.1) WILD-TYPE" 
                   TCGA-HT-7479                    TCGA-HT-7480 
"DEL PEAK  6(4Q34.1) WILD-TYPE"   "DEL PEAK  6(4Q34.1) MUTATED" 
                   TCGA-HT-7481                    TCGA-HT-7482 
"DEL PEAK  6(4Q34.1) WILD-TYPE" "DEL PEAK  6(4Q34.1) WILD-TYPE" 
                   TCGA-HT-7483                    TCGA-HT-7485 
"DEL PEAK  6(4Q34.1) WILD-TYPE" "DEL PEAK  6(4Q34.1) WILD-TYPE" 
                   TCGA-HT-7601                    TCGA-HT-7602 
"DEL PEAK  6(4Q34.1) WILD-TYPE" "DEL PEAK  6(4Q34.1) WILD-TYPE" 
                   TCGA-HT-7603                    TCGA-HT-7604 
"DEL PEAK  6(4Q34.1) WILD-TYPE" "DEL PEAK  6(4Q34.1) WILD-TYPE" 
                   TCGA-HT-7605                    TCGA-HT-7606 
"DEL PEAK  6(4Q34.1) WILD-TYPE" "DEL PEAK  6(4Q34.1) WILD-TYPE" 
                   TCGA-HT-7607                    TCGA-HT-7608 
"DEL PEAK  6(4Q34.1) WILD-TYPE" "DEL PEAK  6(4Q34.1) WILD-TYPE" 
                   TCGA-HT-7609                    TCGA-HT-7610 
"DEL PEAK  6(4Q34.1) WILD-TYPE" "DEL PEAK  6(4Q34.1) WILD-TYPE" 
                   TCGA-HW-7486                    TCGA-HW-7487 
"DEL PEAK  6(4Q34.1) WILD-TYPE"   "DEL PEAK  6(4Q34.1) MUTATED" 
                   TCGA-HW-7489                    TCGA-HW-7490 
  "DEL PEAK  6(4Q34.1) MUTATED" "DEL PEAK  6(4Q34.1) WILD-TYPE" 
                   TCGA-HW-7491                    TCGA-HW-7493 
  "DEL PEAK  6(4Q34.1) MUTATED"   "DEL PEAK  6(4Q34.1) MUTATED" 
                   TCGA-HW-7495                    TCGA-IK-7675 
"DEL PEAK  6(4Q34.1) WILD-TYPE"   "DEL PEAK  6(4Q34.1) MUTATED" 
                   TCGA-IK-8125 
  "DEL PEAK  6(4Q34.1) MUTATED" 
                   TCGA-CS-4938                    TCGA-CS-4941 
"DEL PEAK  6(4Q34.1) WILD-TYPE" "DEL PEAK  6(4Q34.1) WILD-TYPE" 
                   TCGA-CS-4942                    TCGA-CS-4943 
"DEL PEAK  6(4Q34.1) WILD-TYPE"   "DEL PEAK  6(4Q34.1) MUTATED" 
                   TCGA-CS-4944                    TCGA-CS-5390 
"DEL PEAK  6(4Q34.1) WILD-TYPE"   "DEL PEAK  6(4Q34.1) MUTATED" 
                   TCGA-CS-5393                    TCGA-CS-5394 
"DEL PEAK  6(4Q34.1) WILD-TYPE" "DEL PEAK  6(4Q34.1) WILD-TYPE" 
                   TCGA-CS-5395                    TCGA-CS-5396 
"DEL PEAK  6(4Q34.1) WILD-TYPE" "DEL PEAK  6(4Q34.1) WILD-TYPE" 
                   TCGA-CS-5397                    TCGA-CS-6186 
"DEL PEAK  6(4Q34.1) WILD-TYPE" "DEL PEAK  6(4Q34.1) WILD-TYPE" 
                   TCGA-CS-6188                    TCGA-CS-6290 
"DEL PEAK  6(4Q34.1) WILD-TYPE" "DEL PEAK  6(4Q34.1) WILD-TYPE" 
                   TCGA-CS-6665                    TCGA-CS-6666 
"DEL PEAK  6(4Q34.1) WILD-TYPE" "DEL PEAK  6(4Q34.1) WILD-TYPE" 
                   TCGA-CS-6667                    TCGA-CS-6668 
  "DEL PEAK  6(4Q34.1) MUTATED" "DEL PEAK  6(4Q34.1) WILD-TYPE" 
                   TCGA-CS-6669                    TCGA-CS-6670 
"DEL PEAK  6(4Q34.1) WILD-TYPE" "DEL PEAK  6(4Q34.1) WILD-TYPE" 
                   TCGA-DB-5270                    TCGA-DB-5273 
"DEL PEAK  6(4Q34.1) WILD-TYPE" "DEL PEAK  6(4Q34.1) WILD-TYPE" 
                   TCGA-DB-5274                    TCGA-DB-5275 
  "DEL PEAK  6(4Q34.1) MUTATED"   "DEL PEAK  6(4Q34.1) MUTATED" 
                   TCGA-DB-5276                    TCGA-DB-5277 
"DEL PEAK  6(4Q34.1) WILD-TYPE"   "DEL PEAK  6(4Q34.1) MUTATED" 
                   TCGA-DB-5278                    TCGA-DB-5279 
"DEL PEAK  6(4Q34.1) WILD-TYPE"   "DEL PEAK  6(4Q34.1) MUTATED" 
                   TCGA-DB-5280                    TCGA-DB-5281 
"DEL PEAK  6(4Q34.1) WILD-TYPE"   "DEL PEAK  6(4Q34.1) MUTATED" 
                   TCGA-DH-5140                    TCGA-DH-5141 
"DEL PEAK  6(4Q34.1) WILD-TYPE" "DEL PEAK  6(4Q34.1) WILD-TYPE" 
                   TCGA-DH-5142                    TCGA-DH-5143 
"DEL PEAK  6(4Q34.1) WILD-TYPE" "DEL PEAK  6(4Q34.1) WILD-TYPE" 
                   TCGA-DH-5144                    TCGA-DU-5847 
"DEL PEAK  6(4Q34.1) WILD-TYPE" "DEL PEAK  6(4Q34.1) WILD-TYPE" 
                   TCGA-DU-5849                    TCGA-DU-5851 
"DEL PEAK  6(4Q34.1) WILD-TYPE"   "DEL PEAK  6(4Q34.1) MUTATED" 
                   TCGA-DU-5852                    TCGA-DU-5853 
"DEL PEAK  6(4Q34.1) WILD-TYPE"   "DEL PEAK  6(4Q34.1) MUTATED" 
                   TCGA-DU-5854                    TCGA-DU-5855 
"DEL PEAK  6(4Q34.1) WILD-TYPE" "DEL PEAK  6(4Q34.1) WILD-TYPE" 
                   TCGA-DU-5870                    TCGA-DU-5871 
"DEL PEAK  6(4Q34.1) WILD-TYPE"   "DEL PEAK  6(4Q34.1) MUTATED" 
                   TCGA-DU-5872                    TCGA-DU-5874 
"DEL PEAK  6(4Q34.1) WILD-TYPE"   "DEL PEAK  6(4Q34.1) MUTATED" 
                   TCGA-DU-6392                    TCGA-DU-6393 
"DEL PEAK  6(4Q34.1) WILD-TYPE" "DEL PEAK  6(4Q34.1) WILD-TYPE" 
                   TCGA-DU-6394                    TCGA-DU-6395 
"DEL PEAK  6(4Q34.1) WILD-TYPE" "DEL PEAK  6(4Q34.1) WILD-TYPE" 
                   TCGA-DU-6396                    TCGA-DU-6397 
"DEL PEAK  6(4Q34.1) WILD-TYPE" "DEL PEAK  6(4Q34.1) WILD-TYPE" 
                   TCGA-DU-6399                    TCGA-DU-6400 
  "DEL PEAK  6(4Q34.1) MUTATED"   "DEL PEAK  6(4Q34.1) MUTATED" 
                   TCGA-DU-6401                    TCGA-DU-6402 
"DEL PEAK  6(4Q34.1) WILD-TYPE" "DEL PEAK  6(4Q34.1) WILD-TYPE" 
                   TCGA-DU-6403                    TCGA-DU-6404 
"DEL PEAK  6(4Q34.1) WILD-TYPE" "DEL PEAK  6(4Q34.1) WILD-TYPE" 
                   TCGA-DU-6405                    TCGA-DU-6406 
  "DEL PEAK  6(4Q34.1) MUTATED" "DEL PEAK  6(4Q34.1) WILD-TYPE" 
                   TCGA-DU-6407                    TCGA-DU-6408 
"DEL PEAK  6(4Q34.1) WILD-TYPE" "DEL PEAK  6(4Q34.1) WILD-TYPE" 
                   TCGA-DU-6410                    TCGA-DU-6542 
  "DEL PEAK  6(4Q34.1) MUTATED" "DEL PEAK  6(4Q34.1) WILD-TYPE" 
                   TCGA-DU-7006                    TCGA-DU-7007 
"DEL PEAK  6(4Q34.1) WILD-TYPE"   "DEL PEAK  6(4Q34.1) MUTATED" 
                   TCGA-DU-7008                    TCGA-DU-7009 
  "DEL PEAK  6(4Q34.1) MUTATED" "DEL PEAK  6(4Q34.1) WILD-TYPE" 
                   TCGA-DU-7010                    TCGA-DU-7011 
  "DEL PEAK  6(4Q34.1) MUTATED" "DEL PEAK  6(4Q34.1) WILD-TYPE" 
                   TCGA-DU-7012                    TCGA-DU-7013 
"DEL PEAK  6(4Q34.1) WILD-TYPE" "DEL PEAK  6(4Q34.1) WILD-TYPE" 
                   TCGA-DU-7014                    TCGA-DU-7015 
"DEL PEAK  6(4Q34.1) WILD-TYPE" "DEL PEAK  6(4Q34.1) WILD-TYPE" 
                   TCGA-DU-7018                    TCGA-DU-7019 
  "DEL PEAK  6(4Q34.1) MUTATED" "DEL PEAK  6(4Q34.1) WILD-TYPE" 
                   TCGA-DU-7290                    TCGA-DU-7292 
"DEL PEAK  6(4Q34.1) WILD-TYPE" "DEL PEAK  6(4Q34.1) WILD-TYPE" 
                   TCGA-DU-7294                    TCGA-DU-7298 
  "DEL PEAK  6(4Q34.1) MUTATED" "DEL PEAK  6(4Q34.1) WILD-TYPE" 
                   TCGA-DU-7299                    TCGA-DU-7300 
  "DEL PEAK  6(4Q34.1) MUTATED" "DEL PEAK  6(4Q34.1) WILD-TYPE" 
                   TCGA-DU-7301                    TCGA-DU-7302 
  "DEL PEAK  6(4Q34.1) MUTATED"   "DEL PEAK  6(4Q34.1) MUTATED" 
                   TCGA-DU-7304                    TCGA-DU-7306 
"DEL PEAK  6(4Q34.1) WILD-TYPE" "DEL PEAK  6(4Q34.1) WILD-TYPE" 
                   TCGA-DU-7309                    TCGA-E1-5302 
  "DEL PEAK  6(4Q34.1) MUTATED"   "DEL PEAK  6(4Q34.1) MUTATED" 
                   TCGA-E1-5303                    TCGA-E1-5304 
  "DEL PEAK  6(4Q34.1) MUTATED"   "DEL PEAK  6(4Q34.1) MUTATED" 
                   TCGA-E1-5305                    TCGA-E1-5307 
  "DEL PEAK  6(4Q34.1) MUTATED" "DEL PEAK  6(4Q34.1) WILD-TYPE" 
                   TCGA-E1-5311                    TCGA-E1-5318 
  "DEL PEAK  6(4Q34.1) MUTATED" "DEL PEAK  6(4Q34.1) WILD-TYPE" 
                   TCGA-E1-5319                    TCGA-E1-5322 
"DEL PEAK  6(4Q34.1) WILD-TYPE"   "DEL PEAK  6(4Q34.1) MUTATED" 
                   TCGA-EZ-7264                    TCGA-FG-5962 
  "DEL PEAK  6(4Q34.1) MUTATED"   "DEL PEAK  6(4Q34.1) MUTATED" 
                   TCGA-FG-5963                    TCGA-FG-5964 
  "DEL PEAK  6(4Q34.1) MUTATED"   "DEL PEAK  6(4Q34.1) MUTATED" 
                   TCGA-FG-5965                    TCGA-FG-6688 
"DEL PEAK  6(4Q34.1) WILD-TYPE" "DEL PEAK  6(4Q34.1) WILD-TYPE" 
                   TCGA-FG-6689                    TCGA-FG-6690 
"DEL PEAK  6(4Q34.1) WILD-TYPE" "DEL PEAK  6(4Q34.1) WILD-TYPE" 
                   TCGA-FG-6691                    TCGA-FG-6692 
"DEL PEAK  6(4Q34.1) WILD-TYPE" "DEL PEAK  6(4Q34.1) WILD-TYPE" 
                   TCGA-FG-7634                    TCGA-FG-7636 
"DEL PEAK  6(4Q34.1) WILD-TYPE"   "DEL PEAK  6(4Q34.1) MUTATED" 
                   TCGA-FG-7638                    TCGA-FG-7643 
  "DEL PEAK  6(4Q34.1) MUTATED" "DEL PEAK  6(4Q34.1) WILD-TYPE" 
                   TCGA-FN-7833                    TCGA-HT-7467 
"DEL PEAK  6(4Q34.1) WILD-TYPE"   "DEL PEAK  6(4Q34.1) MUTATED" 
                   TCGA-HT-7468                    TCGA-HT-7470 
  "DEL PEAK  6(4Q34.1) MUTATED" "DEL PEAK  6(4Q34.1) WILD-TYPE" 
                   TCGA-HT-7472                    TCGA-HT-7473 
"DEL PEAK  6(4Q34.1) WILD-TYPE"   "DEL PEAK  6(4Q34.1) MUTATED" 
                   TCGA-HT-7474                    TCGA-HT-7475 
"DEL PEAK  6(4Q34.1) WILD-TYPE" "DEL PEAK  6(4Q34.1) WILD-TYPE" 
                   TCGA-HT-7476                    TCGA-HT-7478 
  "DEL PEAK  6(4Q34.1) MUTATED" "DEL PEAK  6(4Q34.1) WILD-TYPE" 
                   TCGA-HT-7479                    TCGA-HT-7480 
"DEL PEAK  6(4Q34.1) WILD-TYPE"   "DEL PEAK  6(4Q34.1) MUTATED" 
                   TCGA-HT-7481                    TCGA-HT-7482 
"DEL PEAK  6(4Q34.1) WILD-TYPE" "DEL PEAK  6(4Q34.1) WILD-TYPE" 
                   TCGA-HT-7483                    TCGA-HT-7485 
"DEL PEAK  6(4Q34.1) WILD-TYPE" "DEL PEAK  6(4Q34.1) WILD-TYPE" 
                   TCGA-HT-7601                    TCGA-HT-7602 
"DEL PEAK  6(4Q34.1) WILD-TYPE" "DEL PEAK  6(4Q34.1) WILD-TYPE" 
                   TCGA-HT-7603                    TCGA-HT-7604 
"DEL PEAK  6(4Q34.1) WILD-TYPE" "DEL PEAK  6(4Q34.1) WILD-TYPE" 
                   TCGA-HT-7605                    TCGA-HT-7606 
"DEL PEAK  6(4Q34.1) WILD-TYPE" "DEL PEAK  6(4Q34.1) WILD-TYPE" 
                   TCGA-HT-7607                    TCGA-HT-7608 
"DEL PEAK  6(4Q34.1) WILD-TYPE" "DEL PEAK  6(4Q34.1) WILD-TYPE" 
                   TCGA-HT-7609                    TCGA-HT-7610 
"DEL PEAK  6(4Q34.1) WILD-TYPE" "DEL PEAK  6(4Q34.1) WILD-TYPE" 
                   TCGA-HW-7486                    TCGA-HW-7487 
"DEL PEAK  6(4Q34.1) WILD-TYPE"   "DEL PEAK  6(4Q34.1) MUTATED" 
                   TCGA-HW-7489                    TCGA-HW-7490 
  "DEL PEAK  6(4Q34.1) MUTATED" "DEL PEAK  6(4Q34.1) WILD-TYPE" 
                   TCGA-HW-7491                    TCGA-HW-7493 
  "DEL PEAK  6(4Q34.1) MUTATED"   "DEL PEAK  6(4Q34.1) MUTATED" 
                   TCGA-HW-7495                    TCGA-IK-7675 
"DEL PEAK  6(4Q34.1) WILD-TYPE"   "DEL PEAK  6(4Q34.1) MUTATED" 
                   TCGA-IK-8125 
  "DEL PEAK  6(4Q34.1) MUTATED" 
[1] "hr=" "1.1"
D20V2, continuous
D20V3, binary
[1] "tbl2"
                               cls
clus                            [,1] [,2]
  DEL PEAK  6(4Q34.1) MUTATED     18   30
  DEL PEAK  6(4Q34.1) WILD-TYPE   44   53
        clus
vv       DEL PEAK  6(4Q34.1) MUTATED DEL PEAK  6(4Q34.1) WILD-TYPE
  FEMALE                          18                            44
  MALE                            30                            53
D20V4, continuous
D20V5, multiclass
                   clus
vv                  DEL PEAK  6(4Q34.1) MUTATED DEL PEAK  6(4Q34.1) WILD-TYPE
  ASTROCYTOMA                                15                            35
  OLIGOASTROCYTOMA                            9                            27
  OLIGODENDROGLIOMA                          24                            34
D20V6, binary
[1] "tbl2"
                               cls
clus                            [,1] [,2]
  DEL PEAK  6(4Q34.1) MUTATED     20   28
  DEL PEAK  6(4Q34.1) WILD-TYPE   39   58
     clus
vv    DEL PEAK  6(4Q34.1) MUTATED DEL PEAK  6(4Q34.1) WILD-TYPE
  NO                           28                            58
  YES                          20                            39
D20V7, binary
[1] "tbl2"
                               cls
clus                            [,1] [,2]
  DEL PEAK  6(4Q34.1) MUTATED     22   26
  DEL PEAK  6(4Q34.1) WILD-TYPE   52   45
     clus
vv    DEL PEAK  6(4Q34.1) MUTATED DEL PEAK  6(4Q34.1) WILD-TYPE
  NO                           26                            45
  YES                          22                            52

Clustering(21) Variable = Del Peak  7(4q35.1) mutation analysis
D21V1, survival
                   TCGA-CS-4938                    TCGA-CS-4941 
"DEL PEAK  7(4Q35.1) WILD-TYPE" "DEL PEAK  7(4Q35.1) WILD-TYPE" 
                   TCGA-CS-4942                    TCGA-CS-4943 
"DEL PEAK  7(4Q35.1) WILD-TYPE"   "DEL PEAK  7(4Q35.1) MUTATED" 
                   TCGA-CS-4944                    TCGA-CS-5390 
"DEL PEAK  7(4Q35.1) WILD-TYPE"   "DEL PEAK  7(4Q35.1) MUTATED" 
                   TCGA-CS-5393                    TCGA-CS-5394 
"DEL PEAK  7(4Q35.1) WILD-TYPE" "DEL PEAK  7(4Q35.1) WILD-TYPE" 
                   TCGA-CS-5395                    TCGA-CS-5396 
"DEL PEAK  7(4Q35.1) WILD-TYPE" "DEL PEAK  7(4Q35.1) WILD-TYPE" 
                   TCGA-CS-5397                    TCGA-CS-6186 
"DEL PEAK  7(4Q35.1) WILD-TYPE" "DEL PEAK  7(4Q35.1) WILD-TYPE" 
                   TCGA-CS-6188                    TCGA-CS-6290 
"DEL PEAK  7(4Q35.1) WILD-TYPE" "DEL PEAK  7(4Q35.1) WILD-TYPE" 
                   TCGA-CS-6665                    TCGA-CS-6666 
"DEL PEAK  7(4Q35.1) WILD-TYPE"   "DEL PEAK  7(4Q35.1) MUTATED" 
                   TCGA-CS-6667                    TCGA-CS-6668 
  "DEL PEAK  7(4Q35.1) MUTATED" "DEL PEAK  7(4Q35.1) WILD-TYPE" 
                   TCGA-CS-6669                    TCGA-CS-6670 
"DEL PEAK  7(4Q35.1) WILD-TYPE" "DEL PEAK  7(4Q35.1) WILD-TYPE" 
                   TCGA-DB-5270                    TCGA-DB-5273 
"DEL PEAK  7(4Q35.1) WILD-TYPE" "DEL PEAK  7(4Q35.1) WILD-TYPE" 
                   TCGA-DB-5274                    TCGA-DB-5275 
  "DEL PEAK  7(4Q35.1) MUTATED"   "DEL PEAK  7(4Q35.1) MUTATED" 
                   TCGA-DB-5276                    TCGA-DB-5277 
"DEL PEAK  7(4Q35.1) WILD-TYPE"   "DEL PEAK  7(4Q35.1) MUTATED" 
                   TCGA-DB-5278                    TCGA-DB-5279 
"DEL PEAK  7(4Q35.1) WILD-TYPE"   "DEL PEAK  7(4Q35.1) MUTATED" 
                   TCGA-DB-5280                    TCGA-DB-5281 
"DEL PEAK  7(4Q35.1) WILD-TYPE"   "DEL PEAK  7(4Q35.1) MUTATED" 
                   TCGA-DH-5140                    TCGA-DH-5141 
"DEL PEAK  7(4Q35.1) WILD-TYPE" "DEL PEAK  7(4Q35.1) WILD-TYPE" 
                   TCGA-DH-5142                    TCGA-DH-5143 
"DEL PEAK  7(4Q35.1) WILD-TYPE" "DEL PEAK  7(4Q35.1) WILD-TYPE" 
                   TCGA-DH-5144                    TCGA-DU-5847 
"DEL PEAK  7(4Q35.1) WILD-TYPE" "DEL PEAK  7(4Q35.1) WILD-TYPE" 
                   TCGA-DU-5849                    TCGA-DU-5851 
"DEL PEAK  7(4Q35.1) WILD-TYPE"   "DEL PEAK  7(4Q35.1) MUTATED" 
                   TCGA-DU-5852                    TCGA-DU-5853 
"DEL PEAK  7(4Q35.1) WILD-TYPE"   "DEL PEAK  7(4Q35.1) MUTATED" 
                   TCGA-DU-5854                    TCGA-DU-5855 
"DEL PEAK  7(4Q35.1) WILD-TYPE" "DEL PEAK  7(4Q35.1) WILD-TYPE" 
                   TCGA-DU-5870                    TCGA-DU-5871 
"DEL PEAK  7(4Q35.1) WILD-TYPE"   "DEL PEAK  7(4Q35.1) MUTATED" 
                   TCGA-DU-5872                    TCGA-DU-5874 
"DEL PEAK  7(4Q35.1) WILD-TYPE"   "DEL PEAK  7(4Q35.1) MUTATED" 
                   TCGA-DU-6392                    TCGA-DU-6393 
"DEL PEAK  7(4Q35.1) WILD-TYPE" "DEL PEAK  7(4Q35.1) WILD-TYPE" 
                   TCGA-DU-6394                    TCGA-DU-6395 
"DEL PEAK  7(4Q35.1) WILD-TYPE" "DEL PEAK  7(4Q35.1) WILD-TYPE" 
                   TCGA-DU-6396                    TCGA-DU-6397 
"DEL PEAK  7(4Q35.1) WILD-TYPE" "DEL PEAK  7(4Q35.1) WILD-TYPE" 
                   TCGA-DU-6399                    TCGA-DU-6400 
  "DEL PEAK  7(4Q35.1) MUTATED"   "DEL PEAK  7(4Q35.1) MUTATED" 
                   TCGA-DU-6401                    TCGA-DU-6402 
"DEL PEAK  7(4Q35.1) WILD-TYPE" "DEL PEAK  7(4Q35.1) WILD-TYPE" 
                   TCGA-DU-6403                    TCGA-DU-6404 
"DEL PEAK  7(4Q35.1) WILD-TYPE" "DEL PEAK  7(4Q35.1) WILD-TYPE" 
                   TCGA-DU-6405                    TCGA-DU-6406 
  "DEL PEAK  7(4Q35.1) MUTATED" "DEL PEAK  7(4Q35.1) WILD-TYPE" 
                   TCGA-DU-6407                    TCGA-DU-6408 
"DEL PEAK  7(4Q35.1) WILD-TYPE" "DEL PEAK  7(4Q35.1) WILD-TYPE" 
                   TCGA-DU-6410                    TCGA-DU-6542 
  "DEL PEAK  7(4Q35.1) MUTATED" "DEL PEAK  7(4Q35.1) WILD-TYPE" 
                   TCGA-DU-7006                    TCGA-DU-7007 
"DEL PEAK  7(4Q35.1) WILD-TYPE"   "DEL PEAK  7(4Q35.1) MUTATED" 
                   TCGA-DU-7008                    TCGA-DU-7009 
  "DEL PEAK  7(4Q35.1) MUTATED" "DEL PEAK  7(4Q35.1) WILD-TYPE" 
                   TCGA-DU-7010                    TCGA-DU-7011 
  "DEL PEAK  7(4Q35.1) MUTATED" "DEL PEAK  7(4Q35.1) WILD-TYPE" 
                   TCGA-DU-7012                    TCGA-DU-7013 
"DEL PEAK  7(4Q35.1) WILD-TYPE" "DEL PEAK  7(4Q35.1) WILD-TYPE" 
                   TCGA-DU-7014                    TCGA-DU-7015 
"DEL PEAK  7(4Q35.1) WILD-TYPE" "DEL PEAK  7(4Q35.1) WILD-TYPE" 
                   TCGA-DU-7018                    TCGA-DU-7019 
  "DEL PEAK  7(4Q35.1) MUTATED" "DEL PEAK  7(4Q35.1) WILD-TYPE" 
                   TCGA-DU-7290                    TCGA-DU-7292 
"DEL PEAK  7(4Q35.1) WILD-TYPE" "DEL PEAK  7(4Q35.1) WILD-TYPE" 
                   TCGA-DU-7294                    TCGA-DU-7298 
  "DEL PEAK  7(4Q35.1) MUTATED" "DEL PEAK  7(4Q35.1) WILD-TYPE" 
                   TCGA-DU-7299                    TCGA-DU-7300 
  "DEL PEAK  7(4Q35.1) MUTATED" "DEL PEAK  7(4Q35.1) WILD-TYPE" 
                   TCGA-DU-7301                    TCGA-DU-7302 
  "DEL PEAK  7(4Q35.1) MUTATED"   "DEL PEAK  7(4Q35.1) MUTATED" 
                   TCGA-DU-7304                    TCGA-DU-7306 
"DEL PEAK  7(4Q35.1) WILD-TYPE" "DEL PEAK  7(4Q35.1) WILD-TYPE" 
                   TCGA-DU-7309                    TCGA-E1-5302 
  "DEL PEAK  7(4Q35.1) MUTATED"   "DEL PEAK  7(4Q35.1) MUTATED" 
                   TCGA-E1-5303                    TCGA-E1-5304 
  "DEL PEAK  7(4Q35.1) MUTATED"   "DEL PEAK  7(4Q35.1) MUTATED" 
                   TCGA-E1-5305                    TCGA-E1-5307 
  "DEL PEAK  7(4Q35.1) MUTATED"   "DEL PEAK  7(4Q35.1) MUTATED" 
                   TCGA-E1-5311                    TCGA-E1-5318 
  "DEL PEAK  7(4Q35.1) MUTATED" "DEL PEAK  7(4Q35.1) WILD-TYPE" 
                   TCGA-E1-5319                    TCGA-E1-5322 
"DEL PEAK  7(4Q35.1) WILD-TYPE"   "DEL PEAK  7(4Q35.1) MUTATED" 
                   TCGA-EZ-7264                    TCGA-FG-5962 
  "DEL PEAK  7(4Q35.1) MUTATED"   "DEL PEAK  7(4Q35.1) MUTATED" 
                   TCGA-FG-5963                    TCGA-FG-5964 
  "DEL PEAK  7(4Q35.1) MUTATED"   "DEL PEAK  7(4Q35.1) MUTATED" 
                   TCGA-FG-5965                    TCGA-FG-6688 
"DEL PEAK  7(4Q35.1) WILD-TYPE" "DEL PEAK  7(4Q35.1) WILD-TYPE" 
                   TCGA-FG-6689                    TCGA-FG-6690 
"DEL PEAK  7(4Q35.1) WILD-TYPE" "DEL PEAK  7(4Q35.1) WILD-TYPE" 
                   TCGA-FG-6691                    TCGA-FG-6692 
"DEL PEAK  7(4Q35.1) WILD-TYPE" "DEL PEAK  7(4Q35.1) WILD-TYPE" 
                   TCGA-FG-7634                    TCGA-FG-7636 
"DEL PEAK  7(4Q35.1) WILD-TYPE"   "DEL PEAK  7(4Q35.1) MUTATED" 
                   TCGA-FG-7638                    TCGA-FG-7643 
  "DEL PEAK  7(4Q35.1) MUTATED" "DEL PEAK  7(4Q35.1) WILD-TYPE" 
                   TCGA-FN-7833                    TCGA-HT-7467 
"DEL PEAK  7(4Q35.1) WILD-TYPE"   "DEL PEAK  7(4Q35.1) MUTATED" 
                   TCGA-HT-7468                    TCGA-HT-7470 
  "DEL PEAK  7(4Q35.1) MUTATED" "DEL PEAK  7(4Q35.1) WILD-TYPE" 
                   TCGA-HT-7472                    TCGA-HT-7473 
"DEL PEAK  7(4Q35.1) WILD-TYPE"   "DEL PEAK  7(4Q35.1) MUTATED" 
                   TCGA-HT-7474                    TCGA-HT-7475 
"DEL PEAK  7(4Q35.1) WILD-TYPE" "DEL PEAK  7(4Q35.1) WILD-TYPE" 
                   TCGA-HT-7476                    TCGA-HT-7478 
  "DEL PEAK  7(4Q35.1) MUTATED" "DEL PEAK  7(4Q35.1) WILD-TYPE" 
                   TCGA-HT-7479                    TCGA-HT-7480 
"DEL PEAK  7(4Q35.1) WILD-TYPE"   "DEL PEAK  7(4Q35.1) MUTATED" 
                   TCGA-HT-7481                    TCGA-HT-7482 
"DEL PEAK  7(4Q35.1) WILD-TYPE" "DEL PEAK  7(4Q35.1) WILD-TYPE" 
                   TCGA-HT-7483                    TCGA-HT-7485 
"DEL PEAK  7(4Q35.1) WILD-TYPE" "DEL PEAK  7(4Q35.1) WILD-TYPE" 
                   TCGA-HT-7601                    TCGA-HT-7602 
"DEL PEAK  7(4Q35.1) WILD-TYPE" "DEL PEAK  7(4Q35.1) WILD-TYPE" 
                   TCGA-HT-7603                    TCGA-HT-7604 
"DEL PEAK  7(4Q35.1) WILD-TYPE" "DEL PEAK  7(4Q35.1) WILD-TYPE" 
                   TCGA-HT-7605                    TCGA-HT-7606 
"DEL PEAK  7(4Q35.1) WILD-TYPE" "DEL PEAK  7(4Q35.1) WILD-TYPE" 
                   TCGA-HT-7607                    TCGA-HT-7608 
"DEL PEAK  7(4Q35.1) WILD-TYPE" "DEL PEAK  7(4Q35.1) WILD-TYPE" 
                   TCGA-HT-7609                    TCGA-HT-7610 
"DEL PEAK  7(4Q35.1) WILD-TYPE" "DEL PEAK  7(4Q35.1) WILD-TYPE" 
                   TCGA-HW-7486                    TCGA-HW-7487 
"DEL PEAK  7(4Q35.1) WILD-TYPE"   "DEL PEAK  7(4Q35.1) MUTATED" 
                   TCGA-HW-7489                    TCGA-HW-7490 
  "DEL PEAK  7(4Q35.1) MUTATED" "DEL PEAK  7(4Q35.1) WILD-TYPE" 
                   TCGA-HW-7491                    TCGA-HW-7493 
  "DEL PEAK  7(4Q35.1) MUTATED"   "DEL PEAK  7(4Q35.1) MUTATED" 
                   TCGA-HW-7495                    TCGA-IK-7675 
"DEL PEAK  7(4Q35.1) WILD-TYPE"   "DEL PEAK  7(4Q35.1) MUTATED" 
                   TCGA-IK-8125 
  "DEL PEAK  7(4Q35.1) MUTATED" 
                   TCGA-CS-4938                    TCGA-CS-4941 
"DEL PEAK  7(4Q35.1) WILD-TYPE" "DEL PEAK  7(4Q35.1) WILD-TYPE" 
                   TCGA-CS-4942                    TCGA-CS-4943 
"DEL PEAK  7(4Q35.1) WILD-TYPE"   "DEL PEAK  7(4Q35.1) MUTATED" 
                   TCGA-CS-4944                    TCGA-CS-5390 
"DEL PEAK  7(4Q35.1) WILD-TYPE"   "DEL PEAK  7(4Q35.1) MUTATED" 
                   TCGA-CS-5393                    TCGA-CS-5394 
"DEL PEAK  7(4Q35.1) WILD-TYPE" "DEL PEAK  7(4Q35.1) WILD-TYPE" 
                   TCGA-CS-5395                    TCGA-CS-5396 
"DEL PEAK  7(4Q35.1) WILD-TYPE" "DEL PEAK  7(4Q35.1) WILD-TYPE" 
                   TCGA-CS-5397                    TCGA-CS-6186 
"DEL PEAK  7(4Q35.1) WILD-TYPE" "DEL PEAK  7(4Q35.1) WILD-TYPE" 
                   TCGA-CS-6188                    TCGA-CS-6290 
"DEL PEAK  7(4Q35.1) WILD-TYPE" "DEL PEAK  7(4Q35.1) WILD-TYPE" 
                   TCGA-CS-6665                    TCGA-CS-6666 
"DEL PEAK  7(4Q35.1) WILD-TYPE"   "DEL PEAK  7(4Q35.1) MUTATED" 
                   TCGA-CS-6667                    TCGA-CS-6668 
  "DEL PEAK  7(4Q35.1) MUTATED" "DEL PEAK  7(4Q35.1) WILD-TYPE" 
                   TCGA-CS-6669                    TCGA-CS-6670 
"DEL PEAK  7(4Q35.1) WILD-TYPE" "DEL PEAK  7(4Q35.1) WILD-TYPE" 
                   TCGA-DB-5270                    TCGA-DB-5273 
"DEL PEAK  7(4Q35.1) WILD-TYPE" "DEL PEAK  7(4Q35.1) WILD-TYPE" 
                   TCGA-DB-5274                    TCGA-DB-5275 
  "DEL PEAK  7(4Q35.1) MUTATED"   "DEL PEAK  7(4Q35.1) MUTATED" 
                   TCGA-DB-5276                    TCGA-DB-5277 
"DEL PEAK  7(4Q35.1) WILD-TYPE"   "DEL PEAK  7(4Q35.1) MUTATED" 
                   TCGA-DB-5278                    TCGA-DB-5279 
"DEL PEAK  7(4Q35.1) WILD-TYPE"   "DEL PEAK  7(4Q35.1) MUTATED" 
                   TCGA-DB-5280                    TCGA-DB-5281 
"DEL PEAK  7(4Q35.1) WILD-TYPE"   "DEL PEAK  7(4Q35.1) MUTATED" 
                   TCGA-DH-5140                    TCGA-DH-5141 
"DEL PEAK  7(4Q35.1) WILD-TYPE" "DEL PEAK  7(4Q35.1) WILD-TYPE" 
                   TCGA-DH-5142                    TCGA-DH-5143 
"DEL PEAK  7(4Q35.1) WILD-TYPE" "DEL PEAK  7(4Q35.1) WILD-TYPE" 
                   TCGA-DH-5144                    TCGA-DU-5847 
"DEL PEAK  7(4Q35.1) WILD-TYPE" "DEL PEAK  7(4Q35.1) WILD-TYPE" 
                   TCGA-DU-5849                    TCGA-DU-5851 
"DEL PEAK  7(4Q35.1) WILD-TYPE"   "DEL PEAK  7(4Q35.1) MUTATED" 
                   TCGA-DU-5852                    TCGA-DU-5853 
"DEL PEAK  7(4Q35.1) WILD-TYPE"   "DEL PEAK  7(4Q35.1) MUTATED" 
                   TCGA-DU-5854                    TCGA-DU-5855 
"DEL PEAK  7(4Q35.1) WILD-TYPE" "DEL PEAK  7(4Q35.1) WILD-TYPE" 
                   TCGA-DU-5870                    TCGA-DU-5871 
"DEL PEAK  7(4Q35.1) WILD-TYPE"   "DEL PEAK  7(4Q35.1) MUTATED" 
                   TCGA-DU-5872                    TCGA-DU-5874 
"DEL PEAK  7(4Q35.1) WILD-TYPE"   "DEL PEAK  7(4Q35.1) MUTATED" 
                   TCGA-DU-6392                    TCGA-DU-6393 
"DEL PEAK  7(4Q35.1) WILD-TYPE" "DEL PEAK  7(4Q35.1) WILD-TYPE" 
                   TCGA-DU-6394                    TCGA-DU-6395 
"DEL PEAK  7(4Q35.1) WILD-TYPE" "DEL PEAK  7(4Q35.1) WILD-TYPE" 
                   TCGA-DU-6396                    TCGA-DU-6397 
"DEL PEAK  7(4Q35.1) WILD-TYPE" "DEL PEAK  7(4Q35.1) WILD-TYPE" 
                   TCGA-DU-6399                    TCGA-DU-6400 
  "DEL PEAK  7(4Q35.1) MUTATED"   "DEL PEAK  7(4Q35.1) MUTATED" 
                   TCGA-DU-6401                    TCGA-DU-6402 
"DEL PEAK  7(4Q35.1) WILD-TYPE" "DEL PEAK  7(4Q35.1) WILD-TYPE" 
                   TCGA-DU-6403                    TCGA-DU-6404 
"DEL PEAK  7(4Q35.1) WILD-TYPE" "DEL PEAK  7(4Q35.1) WILD-TYPE" 
                   TCGA-DU-6405                    TCGA-DU-6406 
  "DEL PEAK  7(4Q35.1) MUTATED" "DEL PEAK  7(4Q35.1) WILD-TYPE" 
                   TCGA-DU-6407                    TCGA-DU-6408 
"DEL PEAK  7(4Q35.1) WILD-TYPE" "DEL PEAK  7(4Q35.1) WILD-TYPE" 
                   TCGA-DU-6410                    TCGA-DU-6542 
  "DEL PEAK  7(4Q35.1) MUTATED" "DEL PEAK  7(4Q35.1) WILD-TYPE" 
                   TCGA-DU-7006                    TCGA-DU-7007 
"DEL PEAK  7(4Q35.1) WILD-TYPE"   "DEL PEAK  7(4Q35.1) MUTATED" 
                   TCGA-DU-7008                    TCGA-DU-7009 
  "DEL PEAK  7(4Q35.1) MUTATED" "DEL PEAK  7(4Q35.1) WILD-TYPE" 
                   TCGA-DU-7010                    TCGA-DU-7011 
  "DEL PEAK  7(4Q35.1) MUTATED" "DEL PEAK  7(4Q35.1) WILD-TYPE" 
                   TCGA-DU-7012                    TCGA-DU-7013 
"DEL PEAK  7(4Q35.1) WILD-TYPE" "DEL PEAK  7(4Q35.1) WILD-TYPE" 
                   TCGA-DU-7014                    TCGA-DU-7015 
"DEL PEAK  7(4Q35.1) WILD-TYPE" "DEL PEAK  7(4Q35.1) WILD-TYPE" 
                   TCGA-DU-7018                    TCGA-DU-7019 
  "DEL PEAK  7(4Q35.1) MUTATED" "DEL PEAK  7(4Q35.1) WILD-TYPE" 
                   TCGA-DU-7290                    TCGA-DU-7292 
"DEL PEAK  7(4Q35.1) WILD-TYPE" "DEL PEAK  7(4Q35.1) WILD-TYPE" 
                   TCGA-DU-7294                    TCGA-DU-7298 
  "DEL PEAK  7(4Q35.1) MUTATED" "DEL PEAK  7(4Q35.1) WILD-TYPE" 
                   TCGA-DU-7299                    TCGA-DU-7300 
  "DEL PEAK  7(4Q35.1) MUTATED" "DEL PEAK  7(4Q35.1) WILD-TYPE" 
                   TCGA-DU-7301                    TCGA-DU-7302 
  "DEL PEAK  7(4Q35.1) MUTATED"   "DEL PEAK  7(4Q35.1) MUTATED" 
                   TCGA-DU-7304                    TCGA-DU-7306 
"DEL PEAK  7(4Q35.1) WILD-TYPE" "DEL PEAK  7(4Q35.1) WILD-TYPE" 
                   TCGA-DU-7309                    TCGA-E1-5302 
  "DEL PEAK  7(4Q35.1) MUTATED"   "DEL PEAK  7(4Q35.1) MUTATED" 
                   TCGA-E1-5303                    TCGA-E1-5304 
  "DEL PEAK  7(4Q35.1) MUTATED"   "DEL PEAK  7(4Q35.1) MUTATED" 
                   TCGA-E1-5305                    TCGA-E1-5307 
  "DEL PEAK  7(4Q35.1) MUTATED"   "DEL PEAK  7(4Q35.1) MUTATED" 
                   TCGA-E1-5311                    TCGA-E1-5318 
  "DEL PEAK  7(4Q35.1) MUTATED" "DEL PEAK  7(4Q35.1) WILD-TYPE" 
                   TCGA-E1-5319                    TCGA-E1-5322 
"DEL PEAK  7(4Q35.1) WILD-TYPE"   "DEL PEAK  7(4Q35.1) MUTATED" 
                   TCGA-EZ-7264                    TCGA-FG-5962 
  "DEL PEAK  7(4Q35.1) MUTATED"   "DEL PEAK  7(4Q35.1) MUTATED" 
                   TCGA-FG-5963                    TCGA-FG-5964 
  "DEL PEAK  7(4Q35.1) MUTATED"   "DEL PEAK  7(4Q35.1) MUTATED" 
                   TCGA-FG-5965                    TCGA-FG-6688 
"DEL PEAK  7(4Q35.1) WILD-TYPE" "DEL PEAK  7(4Q35.1) WILD-TYPE" 
                   TCGA-FG-6689                    TCGA-FG-6690 
"DEL PEAK  7(4Q35.1) WILD-TYPE" "DEL PEAK  7(4Q35.1) WILD-TYPE" 
                   TCGA-FG-6691                    TCGA-FG-6692 
"DEL PEAK  7(4Q35.1) WILD-TYPE" "DEL PEAK  7(4Q35.1) WILD-TYPE" 
                   TCGA-FG-7634                    TCGA-FG-7636 
"DEL PEAK  7(4Q35.1) WILD-TYPE"   "DEL PEAK  7(4Q35.1) MUTATED" 
                   TCGA-FG-7638                    TCGA-FG-7643 
  "DEL PEAK  7(4Q35.1) MUTATED" "DEL PEAK  7(4Q35.1) WILD-TYPE" 
                   TCGA-FN-7833                    TCGA-HT-7467 
"DEL PEAK  7(4Q35.1) WILD-TYPE"   "DEL PEAK  7(4Q35.1) MUTATED" 
                   TCGA-HT-7468                    TCGA-HT-7470 
  "DEL PEAK  7(4Q35.1) MUTATED" "DEL PEAK  7(4Q35.1) WILD-TYPE" 
                   TCGA-HT-7472                    TCGA-HT-7473 
"DEL PEAK  7(4Q35.1) WILD-TYPE"   "DEL PEAK  7(4Q35.1) MUTATED" 
                   TCGA-HT-7474                    TCGA-HT-7475 
"DEL PEAK  7(4Q35.1) WILD-TYPE" "DEL PEAK  7(4Q35.1) WILD-TYPE" 
                   TCGA-HT-7476                    TCGA-HT-7478 
  "DEL PEAK  7(4Q35.1) MUTATED" "DEL PEAK  7(4Q35.1) WILD-TYPE" 
                   TCGA-HT-7479                    TCGA-HT-7480 
"DEL PEAK  7(4Q35.1) WILD-TYPE"   "DEL PEAK  7(4Q35.1) MUTATED" 
                   TCGA-HT-7481                    TCGA-HT-7482 
"DEL PEAK  7(4Q35.1) WILD-TYPE" "DEL PEAK  7(4Q35.1) WILD-TYPE" 
                   TCGA-HT-7483                    TCGA-HT-7485 
"DEL PEAK  7(4Q35.1) WILD-TYPE" "DEL PEAK  7(4Q35.1) WILD-TYPE" 
                   TCGA-HT-7601                    TCGA-HT-7602 
"DEL PEAK  7(4Q35.1) WILD-TYPE" "DEL PEAK  7(4Q35.1) WILD-TYPE" 
                   TCGA-HT-7603                    TCGA-HT-7604 
"DEL PEAK  7(4Q35.1) WILD-TYPE" "DEL PEAK  7(4Q35.1) WILD-TYPE" 
                   TCGA-HT-7605                    TCGA-HT-7606 
"DEL PEAK  7(4Q35.1) WILD-TYPE" "DEL PEAK  7(4Q35.1) WILD-TYPE" 
                   TCGA-HT-7607                    TCGA-HT-7608 
"DEL PEAK  7(4Q35.1) WILD-TYPE" "DEL PEAK  7(4Q35.1) WILD-TYPE" 
                   TCGA-HT-7609                    TCGA-HT-7610 
"DEL PEAK  7(4Q35.1) WILD-TYPE" "DEL PEAK  7(4Q35.1) WILD-TYPE" 
                   TCGA-HW-7486                    TCGA-HW-7487 
"DEL PEAK  7(4Q35.1) WILD-TYPE"   "DEL PEAK  7(4Q35.1) MUTATED" 
                   TCGA-HW-7489                    TCGA-HW-7490 
  "DEL PEAK  7(4Q35.1) MUTATED" "DEL PEAK  7(4Q35.1) WILD-TYPE" 
                   TCGA-HW-7491                    TCGA-HW-7493 
  "DEL PEAK  7(4Q35.1) MUTATED"   "DEL PEAK  7(4Q35.1) MUTATED" 
                   TCGA-HW-7495                    TCGA-IK-7675 
"DEL PEAK  7(4Q35.1) WILD-TYPE"   "DEL PEAK  7(4Q35.1) MUTATED" 
                   TCGA-IK-8125 
  "DEL PEAK  7(4Q35.1) MUTATED" 
                   TCGA-CS-4938                    TCGA-CS-4941 
"DEL PEAK  7(4Q35.1) WILD-TYPE" "DEL PEAK  7(4Q35.1) WILD-TYPE" 
                   TCGA-CS-4942                    TCGA-CS-4943 
"DEL PEAK  7(4Q35.1) WILD-TYPE"   "DEL PEAK  7(4Q35.1) MUTATED" 
                   TCGA-CS-4944                    TCGA-CS-5390 
"DEL PEAK  7(4Q35.1) WILD-TYPE"   "DEL PEAK  7(4Q35.1) MUTATED" 
                   TCGA-CS-5393                    TCGA-CS-5394 
"DEL PEAK  7(4Q35.1) WILD-TYPE" "DEL PEAK  7(4Q35.1) WILD-TYPE" 
                   TCGA-CS-5395                    TCGA-CS-5396 
"DEL PEAK  7(4Q35.1) WILD-TYPE" "DEL PEAK  7(4Q35.1) WILD-TYPE" 
                   TCGA-CS-5397                    TCGA-CS-6186 
"DEL PEAK  7(4Q35.1) WILD-TYPE" "DEL PEAK  7(4Q35.1) WILD-TYPE" 
                   TCGA-CS-6188                    TCGA-CS-6290 
"DEL PEAK  7(4Q35.1) WILD-TYPE" "DEL PEAK  7(4Q35.1) WILD-TYPE" 
                   TCGA-CS-6665                    TCGA-CS-6666 
"DEL PEAK  7(4Q35.1) WILD-TYPE"   "DEL PEAK  7(4Q35.1) MUTATED" 
                   TCGA-CS-6667                    TCGA-CS-6668 
  "DEL PEAK  7(4Q35.1) MUTATED" "DEL PEAK  7(4Q35.1) WILD-TYPE" 
                   TCGA-CS-6669                    TCGA-CS-6670 
"DEL PEAK  7(4Q35.1) WILD-TYPE" "DEL PEAK  7(4Q35.1) WILD-TYPE" 
                   TCGA-DB-5270                    TCGA-DB-5273 
"DEL PEAK  7(4Q35.1) WILD-TYPE" "DEL PEAK  7(4Q35.1) WILD-TYPE" 
                   TCGA-DB-5274                    TCGA-DB-5275 
  "DEL PEAK  7(4Q35.1) MUTATED"   "DEL PEAK  7(4Q35.1) MUTATED" 
                   TCGA-DB-5276                    TCGA-DB-5277 
"DEL PEAK  7(4Q35.1) WILD-TYPE"   "DEL PEAK  7(4Q35.1) MUTATED" 
                   TCGA-DB-5278                    TCGA-DB-5279 
"DEL PEAK  7(4Q35.1) WILD-TYPE"   "DEL PEAK  7(4Q35.1) MUTATED" 
                   TCGA-DB-5280                    TCGA-DB-5281 
"DEL PEAK  7(4Q35.1) WILD-TYPE"   "DEL PEAK  7(4Q35.1) MUTATED" 
                   TCGA-DH-5140                    TCGA-DH-5141 
"DEL PEAK  7(4Q35.1) WILD-TYPE" "DEL PEAK  7(4Q35.1) WILD-TYPE" 
                   TCGA-DH-5142                    TCGA-DH-5143 
"DEL PEAK  7(4Q35.1) WILD-TYPE" "DEL PEAK  7(4Q35.1) WILD-TYPE" 
                   TCGA-DH-5144                    TCGA-DU-5847 
"DEL PEAK  7(4Q35.1) WILD-TYPE" "DEL PEAK  7(4Q35.1) WILD-TYPE" 
                   TCGA-DU-5849                    TCGA-DU-5851 
"DEL PEAK  7(4Q35.1) WILD-TYPE"   "DEL PEAK  7(4Q35.1) MUTATED" 
                   TCGA-DU-5852                    TCGA-DU-5853 
"DEL PEAK  7(4Q35.1) WILD-TYPE"   "DEL PEAK  7(4Q35.1) MUTATED" 
                   TCGA-DU-5854                    TCGA-DU-5855 
"DEL PEAK  7(4Q35.1) WILD-TYPE" "DEL PEAK  7(4Q35.1) WILD-TYPE" 
                   TCGA-DU-5870                    TCGA-DU-5871 
"DEL PEAK  7(4Q35.1) WILD-TYPE"   "DEL PEAK  7(4Q35.1) MUTATED" 
                   TCGA-DU-5872                    TCGA-DU-5874 
"DEL PEAK  7(4Q35.1) WILD-TYPE"   "DEL PEAK  7(4Q35.1) MUTATED" 
                   TCGA-DU-6392                    TCGA-DU-6393 
"DEL PEAK  7(4Q35.1) WILD-TYPE" "DEL PEAK  7(4Q35.1) WILD-TYPE" 
                   TCGA-DU-6394                    TCGA-DU-6395 
"DEL PEAK  7(4Q35.1) WILD-TYPE" "DEL PEAK  7(4Q35.1) WILD-TYPE" 
                   TCGA-DU-6396                    TCGA-DU-6397 
"DEL PEAK  7(4Q35.1) WILD-TYPE" "DEL PEAK  7(4Q35.1) WILD-TYPE" 
                   TCGA-DU-6399                    TCGA-DU-6400 
  "DEL PEAK  7(4Q35.1) MUTATED"   "DEL PEAK  7(4Q35.1) MUTATED" 
                   TCGA-DU-6401                    TCGA-DU-6402 
"DEL PEAK  7(4Q35.1) WILD-TYPE" "DEL PEAK  7(4Q35.1) WILD-TYPE" 
                   TCGA-DU-6403                    TCGA-DU-6404 
"DEL PEAK  7(4Q35.1) WILD-TYPE" "DEL PEAK  7(4Q35.1) WILD-TYPE" 
                   TCGA-DU-6405                    TCGA-DU-6406 
  "DEL PEAK  7(4Q35.1) MUTATED" "DEL PEAK  7(4Q35.1) WILD-TYPE" 
                   TCGA-DU-6407                    TCGA-DU-6408 
"DEL PEAK  7(4Q35.1) WILD-TYPE" "DEL PEAK  7(4Q35.1) WILD-TYPE" 
                   TCGA-DU-6410                    TCGA-DU-6542 
  "DEL PEAK  7(4Q35.1) MUTATED" "DEL PEAK  7(4Q35.1) WILD-TYPE" 
                   TCGA-DU-7006                    TCGA-DU-7007 
"DEL PEAK  7(4Q35.1) WILD-TYPE"   "DEL PEAK  7(4Q35.1) MUTATED" 
                   TCGA-DU-7008                    TCGA-DU-7009 
  "DEL PEAK  7(4Q35.1) MUTATED" "DEL PEAK  7(4Q35.1) WILD-TYPE" 
                   TCGA-DU-7010                    TCGA-DU-7011 
  "DEL PEAK  7(4Q35.1) MUTATED" "DEL PEAK  7(4Q35.1) WILD-TYPE" 
                   TCGA-DU-7012                    TCGA-DU-7013 
"DEL PEAK  7(4Q35.1) WILD-TYPE" "DEL PEAK  7(4Q35.1) WILD-TYPE" 
                   TCGA-DU-7014                    TCGA-DU-7015 
"DEL PEAK  7(4Q35.1) WILD-TYPE" "DEL PEAK  7(4Q35.1) WILD-TYPE" 
                   TCGA-DU-7018                    TCGA-DU-7019 
  "DEL PEAK  7(4Q35.1) MUTATED" "DEL PEAK  7(4Q35.1) WILD-TYPE" 
                   TCGA-DU-7290                    TCGA-DU-7292 
"DEL PEAK  7(4Q35.1) WILD-TYPE" "DEL PEAK  7(4Q35.1) WILD-TYPE" 
                   TCGA-DU-7294                    TCGA-DU-7298 
  "DEL PEAK  7(4Q35.1) MUTATED" "DEL PEAK  7(4Q35.1) WILD-TYPE" 
                   TCGA-DU-7299                    TCGA-DU-7300 
  "DEL PEAK  7(4Q35.1) MUTATED" "DEL PEAK  7(4Q35.1) WILD-TYPE" 
                   TCGA-DU-7301                    TCGA-DU-7302 
  "DEL PEAK  7(4Q35.1) MUTATED"   "DEL PEAK  7(4Q35.1) MUTATED" 
                   TCGA-DU-7304                    TCGA-DU-7306 
"DEL PEAK  7(4Q35.1) WILD-TYPE" "DEL PEAK  7(4Q35.1) WILD-TYPE" 
                   TCGA-DU-7309                    TCGA-E1-5302 
  "DEL PEAK  7(4Q35.1) MUTATED"   "DEL PEAK  7(4Q35.1) MUTATED" 
                   TCGA-E1-5303                    TCGA-E1-5304 
  "DEL PEAK  7(4Q35.1) MUTATED"   "DEL PEAK  7(4Q35.1) MUTATED" 
                   TCGA-E1-5305                    TCGA-E1-5307 
  "DEL PEAK  7(4Q35.1) MUTATED"   "DEL PEAK  7(4Q35.1) MUTATED" 
                   TCGA-E1-5311                    TCGA-E1-5318 
  "DEL PEAK  7(4Q35.1) MUTATED" "DEL PEAK  7(4Q35.1) WILD-TYPE" 
                   TCGA-E1-5319                    TCGA-E1-5322 
"DEL PEAK  7(4Q35.1) WILD-TYPE"   "DEL PEAK  7(4Q35.1) MUTATED" 
                   TCGA-EZ-7264                    TCGA-FG-5962 
  "DEL PEAK  7(4Q35.1) MUTATED"   "DEL PEAK  7(4Q35.1) MUTATED" 
                   TCGA-FG-5963                    TCGA-FG-5964 
  "DEL PEAK  7(4Q35.1) MUTATED"   "DEL PEAK  7(4Q35.1) MUTATED" 
                   TCGA-FG-5965                    TCGA-FG-6688 
"DEL PEAK  7(4Q35.1) WILD-TYPE" "DEL PEAK  7(4Q35.1) WILD-TYPE" 
                   TCGA-FG-6689                    TCGA-FG-6690 
"DEL PEAK  7(4Q35.1) WILD-TYPE" "DEL PEAK  7(4Q35.1) WILD-TYPE" 
                   TCGA-FG-6691                    TCGA-FG-6692 
"DEL PEAK  7(4Q35.1) WILD-TYPE" "DEL PEAK  7(4Q35.1) WILD-TYPE" 
                   TCGA-FG-7634                    TCGA-FG-7636 
"DEL PEAK  7(4Q35.1) WILD-TYPE"   "DEL PEAK  7(4Q35.1) MUTATED" 
                   TCGA-FG-7638                    TCGA-FG-7643 
  "DEL PEAK  7(4Q35.1) MUTATED" "DEL PEAK  7(4Q35.1) WILD-TYPE" 
                   TCGA-FN-7833                    TCGA-HT-7467 
"DEL PEAK  7(4Q35.1) WILD-TYPE"   "DEL PEAK  7(4Q35.1) MUTATED" 
                   TCGA-HT-7468                    TCGA-HT-7470 
  "DEL PEAK  7(4Q35.1) MUTATED" "DEL PEAK  7(4Q35.1) WILD-TYPE" 
                   TCGA-HT-7472                    TCGA-HT-7473 
"DEL PEAK  7(4Q35.1) WILD-TYPE"   "DEL PEAK  7(4Q35.1) MUTATED" 
                   TCGA-HT-7474                    TCGA-HT-7475 
"DEL PEAK  7(4Q35.1) WILD-TYPE" "DEL PEAK  7(4Q35.1) WILD-TYPE" 
                   TCGA-HT-7476                    TCGA-HT-7478 
  "DEL PEAK  7(4Q35.1) MUTATED" "DEL PEAK  7(4Q35.1) WILD-TYPE" 
                   TCGA-HT-7479                    TCGA-HT-7480 
"DEL PEAK  7(4Q35.1) WILD-TYPE"   "DEL PEAK  7(4Q35.1) MUTATED" 
                   TCGA-HT-7481                    TCGA-HT-7482 
"DEL PEAK  7(4Q35.1) WILD-TYPE" "DEL PEAK  7(4Q35.1) WILD-TYPE" 
                   TCGA-HT-7483                    TCGA-HT-7485 
"DEL PEAK  7(4Q35.1) WILD-TYPE" "DEL PEAK  7(4Q35.1) WILD-TYPE" 
                   TCGA-HT-7601                    TCGA-HT-7602 
"DEL PEAK  7(4Q35.1) WILD-TYPE" "DEL PEAK  7(4Q35.1) WILD-TYPE" 
                   TCGA-HT-7603                    TCGA-HT-7604 
"DEL PEAK  7(4Q35.1) WILD-TYPE" "DEL PEAK  7(4Q35.1) WILD-TYPE" 
                   TCGA-HT-7605                    TCGA-HT-7606 
"DEL PEAK  7(4Q35.1) WILD-TYPE" "DEL PEAK  7(4Q35.1) WILD-TYPE" 
                   TCGA-HT-7607                    TCGA-HT-7608 
"DEL PEAK  7(4Q35.1) WILD-TYPE" "DEL PEAK  7(4Q35.1) WILD-TYPE" 
                   TCGA-HT-7609                    TCGA-HT-7610 
"DEL PEAK  7(4Q35.1) WILD-TYPE" "DEL PEAK  7(4Q35.1) WILD-TYPE" 
                   TCGA-HW-7486                    TCGA-HW-7487 
"DEL PEAK  7(4Q35.1) WILD-TYPE"   "DEL PEAK  7(4Q35.1) MUTATED" 
                   TCGA-HW-7489                    TCGA-HW-7490 
  "DEL PEAK  7(4Q35.1) MUTATED" "DEL PEAK  7(4Q35.1) WILD-TYPE" 
                   TCGA-HW-7491                    TCGA-HW-7493 
  "DEL PEAK  7(4Q35.1) MUTATED"   "DEL PEAK  7(4Q35.1) MUTATED" 
                   TCGA-HW-7495                    TCGA-IK-7675 
"DEL PEAK  7(4Q35.1) WILD-TYPE"   "DEL PEAK  7(4Q35.1) MUTATED" 
                   TCGA-IK-8125 
  "DEL PEAK  7(4Q35.1) MUTATED" 
[1] "hr=" "1.1"
D21V2, continuous
D21V3, binary
[1] "tbl2"
                               cls
clus                            [,1] [,2]
  DEL PEAK  7(4Q35.1) MUTATED     19   31
  DEL PEAK  7(4Q35.1) WILD-TYPE   43   52
        clus
vv       DEL PEAK  7(4Q35.1) MUTATED DEL PEAK  7(4Q35.1) WILD-TYPE
  FEMALE                          19                            43
  MALE                            31                            52
D21V4, continuous
D21V5, multiclass
                   clus
vv                  DEL PEAK  7(4Q35.1) MUTATED DEL PEAK  7(4Q35.1) WILD-TYPE
  ASTROCYTOMA                                17                            33
  OLIGOASTROCYTOMA                            9                            27
  OLIGODENDROGLIOMA                          24                            34
D21V6, binary
[1] "tbl2"
                               cls
clus                            [,1] [,2]
  DEL PEAK  7(4Q35.1) MUTATED     20   30
  DEL PEAK  7(4Q35.1) WILD-TYPE   39   56
     clus
vv    DEL PEAK  7(4Q35.1) MUTATED DEL PEAK  7(4Q35.1) WILD-TYPE
  NO                           30                            56
  YES                          20                            39
D21V7, binary
[1] "tbl2"
                               cls
clus                            [,1] [,2]
  DEL PEAK  7(4Q35.1) MUTATED     22   28
  DEL PEAK  7(4Q35.1) WILD-TYPE   52   43
     clus
vv    DEL PEAK  7(4Q35.1) MUTATED DEL PEAK  7(4Q35.1) WILD-TYPE
  NO                           28                            43
  YES                          22                            52

Clustering(22) Variable = Del Peak  8(5q35.2) mutation analysis
D22V1, survival
                   TCGA-CS-4938                    TCGA-CS-4941 
"DEL PEAK  8(5Q35.2) WILD-TYPE" "DEL PEAK  8(5Q35.2) WILD-TYPE" 
                   TCGA-CS-4942                    TCGA-CS-4943 
"DEL PEAK  8(5Q35.2) WILD-TYPE" "DEL PEAK  8(5Q35.2) WILD-TYPE" 
                   TCGA-CS-4944                    TCGA-CS-5390 
"DEL PEAK  8(5Q35.2) WILD-TYPE" "DEL PEAK  8(5Q35.2) WILD-TYPE" 
                   TCGA-CS-5393                    TCGA-CS-5394 
"DEL PEAK  8(5Q35.2) WILD-TYPE" "DEL PEAK  8(5Q35.2) WILD-TYPE" 
                   TCGA-CS-5395                    TCGA-CS-5396 
"DEL PEAK  8(5Q35.2) WILD-TYPE" "DEL PEAK  8(5Q35.2) WILD-TYPE" 
                   TCGA-CS-5397                    TCGA-CS-6186 
"DEL PEAK  8(5Q35.2) WILD-TYPE" "DEL PEAK  8(5Q35.2) WILD-TYPE" 
                   TCGA-CS-6188                    TCGA-CS-6290 
"DEL PEAK  8(5Q35.2) WILD-TYPE" "DEL PEAK  8(5Q35.2) WILD-TYPE" 
                   TCGA-CS-6665                    TCGA-CS-6666 
  "DEL PEAK  8(5Q35.2) MUTATED"   "DEL PEAK  8(5Q35.2) MUTATED" 
                   TCGA-CS-6667                    TCGA-CS-6668 
"DEL PEAK  8(5Q35.2) WILD-TYPE" "DEL PEAK  8(5Q35.2) WILD-TYPE" 
                   TCGA-CS-6669                    TCGA-CS-6670 
"DEL PEAK  8(5Q35.2) WILD-TYPE" "DEL PEAK  8(5Q35.2) WILD-TYPE" 
                   TCGA-DB-5270                    TCGA-DB-5273 
"DEL PEAK  8(5Q35.2) WILD-TYPE" "DEL PEAK  8(5Q35.2) WILD-TYPE" 
                   TCGA-DB-5274                    TCGA-DB-5275 
"DEL PEAK  8(5Q35.2) WILD-TYPE" "DEL PEAK  8(5Q35.2) WILD-TYPE" 
                   TCGA-DB-5276                    TCGA-DB-5277 
  "DEL PEAK  8(5Q35.2) MUTATED"   "DEL PEAK  8(5Q35.2) MUTATED" 
                   TCGA-DB-5278                    TCGA-DB-5279 
"DEL PEAK  8(5Q35.2) WILD-TYPE" "DEL PEAK  8(5Q35.2) WILD-TYPE" 
                   TCGA-DB-5280                    TCGA-DB-5281 
"DEL PEAK  8(5Q35.2) WILD-TYPE"   "DEL PEAK  8(5Q35.2) MUTATED" 
                   TCGA-DH-5140                    TCGA-DH-5141 
  "DEL PEAK  8(5Q35.2) MUTATED" "DEL PEAK  8(5Q35.2) WILD-TYPE" 
                   TCGA-DH-5142                    TCGA-DH-5143 
"DEL PEAK  8(5Q35.2) WILD-TYPE" "DEL PEAK  8(5Q35.2) WILD-TYPE" 
                   TCGA-DH-5144                    TCGA-DU-5847 
"DEL PEAK  8(5Q35.2) WILD-TYPE" "DEL PEAK  8(5Q35.2) WILD-TYPE" 
                   TCGA-DU-5849                    TCGA-DU-5851 
"DEL PEAK  8(5Q35.2) WILD-TYPE" "DEL PEAK  8(5Q35.2) WILD-TYPE" 
                   TCGA-DU-5852                    TCGA-DU-5853 
  "DEL PEAK  8(5Q35.2) MUTATED" "DEL PEAK  8(5Q35.2) WILD-TYPE" 
                   TCGA-DU-5854                    TCGA-DU-5855 
"DEL PEAK  8(5Q35.2) WILD-TYPE" "DEL PEAK  8(5Q35.2) WILD-TYPE" 
                   TCGA-DU-5870                    TCGA-DU-5871 
"DEL PEAK  8(5Q35.2) WILD-TYPE" "DEL PEAK  8(5Q35.2) WILD-TYPE" 
                   TCGA-DU-5872                    TCGA-DU-5874 
"DEL PEAK  8(5Q35.2) WILD-TYPE" "DEL PEAK  8(5Q35.2) WILD-TYPE" 
                   TCGA-DU-6392                    TCGA-DU-6393 
"DEL PEAK  8(5Q35.2) WILD-TYPE" "DEL PEAK  8(5Q35.2) WILD-TYPE" 
                   TCGA-DU-6394                    TCGA-DU-6395 
"DEL PEAK  8(5Q35.2) WILD-TYPE" "DEL PEAK  8(5Q35.2) WILD-TYPE" 
                   TCGA-DU-6396                    TCGA-DU-6397 
"DEL PEAK  8(5Q35.2) WILD-TYPE" "DEL PEAK  8(5Q35.2) WILD-TYPE" 
                   TCGA-DU-6399                    TCGA-DU-6400 
  "DEL PEAK  8(5Q35.2) MUTATED" "DEL PEAK  8(5Q35.2) WILD-TYPE" 
                   TCGA-DU-6401                    TCGA-DU-6402 
  "DEL PEAK  8(5Q35.2) MUTATED" "DEL PEAK  8(5Q35.2) WILD-TYPE" 
                   TCGA-DU-6403                    TCGA-DU-6404 
"DEL PEAK  8(5Q35.2) WILD-TYPE" "DEL PEAK  8(5Q35.2) WILD-TYPE" 
                   TCGA-DU-6405                    TCGA-DU-6406 
"DEL PEAK  8(5Q35.2) WILD-TYPE" "DEL PEAK  8(5Q35.2) WILD-TYPE" 
                   TCGA-DU-6407                    TCGA-DU-6408 
"DEL PEAK  8(5Q35.2) WILD-TYPE"   "DEL PEAK  8(5Q35.2) MUTATED" 
                   TCGA-DU-6410                    TCGA-DU-6542 
"DEL PEAK  8(5Q35.2) WILD-TYPE" "DEL PEAK  8(5Q35.2) WILD-TYPE" 
                   TCGA-DU-7006                    TCGA-DU-7007 
"DEL PEAK  8(5Q35.2) WILD-TYPE"   "DEL PEAK  8(5Q35.2) MUTATED" 
                   TCGA-DU-7008                    TCGA-DU-7009 
"DEL PEAK  8(5Q35.2) WILD-TYPE" "DEL PEAK  8(5Q35.2) WILD-TYPE" 
                   TCGA-DU-7010                    TCGA-DU-7011 
  "DEL PEAK  8(5Q35.2) MUTATED" "DEL PEAK  8(5Q35.2) WILD-TYPE" 
                   TCGA-DU-7012                    TCGA-DU-7013 
"DEL PEAK  8(5Q35.2) WILD-TYPE" "DEL PEAK  8(5Q35.2) WILD-TYPE" 
                   TCGA-DU-7014                    TCGA-DU-7015 
"DEL PEAK  8(5Q35.2) WILD-TYPE" "DEL PEAK  8(5Q35.2) WILD-TYPE" 
                   TCGA-DU-7018                    TCGA-DU-7019 
"DEL PEAK  8(5Q35.2) WILD-TYPE" "DEL PEAK  8(5Q35.2) WILD-TYPE" 
                   TCGA-DU-7290                    TCGA-DU-7292 
"DEL PEAK  8(5Q35.2) WILD-TYPE" "DEL PEAK  8(5Q35.2) WILD-TYPE" 
                   TCGA-DU-7294                    TCGA-DU-7298 
"DEL PEAK  8(5Q35.2) WILD-TYPE" "DEL PEAK  8(5Q35.2) WILD-TYPE" 
                   TCGA-DU-7299                    TCGA-DU-7300 
"DEL PEAK  8(5Q35.2) WILD-TYPE" "DEL PEAK  8(5Q35.2) WILD-TYPE" 
                   TCGA-DU-7301                    TCGA-DU-7302 
"DEL PEAK  8(5Q35.2) WILD-TYPE" "DEL PEAK  8(5Q35.2) WILD-TYPE" 
                   TCGA-DU-7304                    TCGA-DU-7306 
"DEL PEAK  8(5Q35.2) WILD-TYPE" "DEL PEAK  8(5Q35.2) WILD-TYPE" 
                   TCGA-DU-7309                    TCGA-E1-5302 
"DEL PEAK  8(5Q35.2) WILD-TYPE"   "DEL PEAK  8(5Q35.2) MUTATED" 
                   TCGA-E1-5303                    TCGA-E1-5304 
"DEL PEAK  8(5Q35.2) WILD-TYPE"   "DEL PEAK  8(5Q35.2) MUTATED" 
                   TCGA-E1-5305                    TCGA-E1-5307 
  "DEL PEAK  8(5Q35.2) MUTATED"   "DEL PEAK  8(5Q35.2) MUTATED" 
                   TCGA-E1-5311                    TCGA-E1-5318 
"DEL PEAK  8(5Q35.2) WILD-TYPE" "DEL PEAK  8(5Q35.2) WILD-TYPE" 
                   TCGA-E1-5319                    TCGA-E1-5322 
"DEL PEAK  8(5Q35.2) WILD-TYPE" "DEL PEAK  8(5Q35.2) WILD-TYPE" 
                   TCGA-EZ-7264                    TCGA-FG-5962 
"DEL PEAK  8(5Q35.2) WILD-TYPE" "DEL PEAK  8(5Q35.2) WILD-TYPE" 
                   TCGA-FG-5963                    TCGA-FG-5964 
  "DEL PEAK  8(5Q35.2) MUTATED" "DEL PEAK  8(5Q35.2) WILD-TYPE" 
                   TCGA-FG-5965                    TCGA-FG-6688 
"DEL PEAK  8(5Q35.2) WILD-TYPE" "DEL PEAK  8(5Q35.2) WILD-TYPE" 
                   TCGA-FG-6689                    TCGA-FG-6690 
"DEL PEAK  8(5Q35.2) WILD-TYPE" "DEL PEAK  8(5Q35.2) WILD-TYPE" 
                   TCGA-FG-6691                    TCGA-FG-6692 
"DEL PEAK  8(5Q35.2) WILD-TYPE" "DEL PEAK  8(5Q35.2) WILD-TYPE" 
                   TCGA-FG-7634                    TCGA-FG-7636 
"DEL PEAK  8(5Q35.2) WILD-TYPE"   "DEL PEAK  8(5Q35.2) MUTATED" 
                   TCGA-FG-7638                    TCGA-FG-7643 
"DEL PEAK  8(5Q35.2) WILD-TYPE" "DEL PEAK  8(5Q35.2) WILD-TYPE" 
                   TCGA-FN-7833                    TCGA-HT-7467 
"DEL PEAK  8(5Q35.2) WILD-TYPE" "DEL PEAK  8(5Q35.2) WILD-TYPE" 
                   TCGA-HT-7468                    TCGA-HT-7470 
"DEL PEAK  8(5Q35.2) WILD-TYPE"   "DEL PEAK  8(5Q35.2) MUTATED" 
                   TCGA-HT-7472                    TCGA-HT-7473 
"DEL PEAK  8(5Q35.2) WILD-TYPE" "DEL PEAK  8(5Q35.2) WILD-TYPE" 
                   TCGA-HT-7474                    TCGA-HT-7475 
"DEL PEAK  8(5Q35.2) WILD-TYPE" "DEL PEAK  8(5Q35.2) WILD-TYPE" 
                   TCGA-HT-7476                    TCGA-HT-7478 
"DEL PEAK  8(5Q35.2) WILD-TYPE" "DEL PEAK  8(5Q35.2) WILD-TYPE" 
                   TCGA-HT-7479                    TCGA-HT-7480 
"DEL PEAK  8(5Q35.2) WILD-TYPE" "DEL PEAK  8(5Q35.2) WILD-TYPE" 
                   TCGA-HT-7481                    TCGA-HT-7482 
"DEL PEAK  8(5Q35.2) WILD-TYPE" "DEL PEAK  8(5Q35.2) WILD-TYPE" 
                   TCGA-HT-7483                    TCGA-HT-7485 
"DEL PEAK  8(5Q35.2) WILD-TYPE" "DEL PEAK  8(5Q35.2) WILD-TYPE" 
                   TCGA-HT-7601                    TCGA-HT-7602 
"DEL PEAK  8(5Q35.2) WILD-TYPE" "DEL PEAK  8(5Q35.2) WILD-TYPE" 
                   TCGA-HT-7603                    TCGA-HT-7604 
"DEL PEAK  8(5Q35.2) WILD-TYPE" "DEL PEAK  8(5Q35.2) WILD-TYPE" 
                   TCGA-HT-7605                    TCGA-HT-7606 
"DEL PEAK  8(5Q35.2) WILD-TYPE" "DEL PEAK  8(5Q35.2) WILD-TYPE" 
                   TCGA-HT-7607                    TCGA-HT-7608 
"DEL PEAK  8(5Q35.2) WILD-TYPE" "DEL PEAK  8(5Q35.2) WILD-TYPE" 
                   TCGA-HT-7609                    TCGA-HT-7610 
  "DEL PEAK  8(5Q35.2) MUTATED" "DEL PEAK  8(5Q35.2) WILD-TYPE" 
                   TCGA-HW-7486                    TCGA-HW-7487 
"DEL PEAK  8(5Q35.2) WILD-TYPE" "DEL PEAK  8(5Q35.2) WILD-TYPE" 
                   TCGA-HW-7489                    TCGA-HW-7490 
  "DEL PEAK  8(5Q35.2) MUTATED" "DEL PEAK  8(5Q35.2) WILD-TYPE" 
                   TCGA-HW-7491                    TCGA-HW-7493 
"DEL PEAK  8(5Q35.2) WILD-TYPE" "DEL PEAK  8(5Q35.2) WILD-TYPE" 
                   TCGA-HW-7495                    TCGA-IK-7675 
"DEL PEAK  8(5Q35.2) WILD-TYPE"   "DEL PEAK  8(5Q35.2) MUTATED" 
                   TCGA-IK-8125 
"DEL PEAK  8(5Q35.2) WILD-TYPE" 
                   TCGA-CS-4938                    TCGA-CS-4941 
"DEL PEAK  8(5Q35.2) WILD-TYPE" "DEL PEAK  8(5Q35.2) WILD-TYPE" 
                   TCGA-CS-4942                    TCGA-CS-4943 
"DEL PEAK  8(5Q35.2) WILD-TYPE" "DEL PEAK  8(5Q35.2) WILD-TYPE" 
                   TCGA-CS-4944                    TCGA-CS-5390 
"DEL PEAK  8(5Q35.2) WILD-TYPE" "DEL PEAK  8(5Q35.2) WILD-TYPE" 
                   TCGA-CS-5393                    TCGA-CS-5394 
"DEL PEAK  8(5Q35.2) WILD-TYPE" "DEL PEAK  8(5Q35.2) WILD-TYPE" 
                   TCGA-CS-5395                    TCGA-CS-5396 
"DEL PEAK  8(5Q35.2) WILD-TYPE" "DEL PEAK  8(5Q35.2) WILD-TYPE" 
                   TCGA-CS-5397                    TCGA-CS-6186 
"DEL PEAK  8(5Q35.2) WILD-TYPE" "DEL PEAK  8(5Q35.2) WILD-TYPE" 
                   TCGA-CS-6188                    TCGA-CS-6290 
"DEL PEAK  8(5Q35.2) WILD-TYPE" "DEL PEAK  8(5Q35.2) WILD-TYPE" 
                   TCGA-CS-6665                    TCGA-CS-6666 
  "DEL PEAK  8(5Q35.2) MUTATED"   "DEL PEAK  8(5Q35.2) MUTATED" 
                   TCGA-CS-6667                    TCGA-CS-6668 
"DEL PEAK  8(5Q35.2) WILD-TYPE" "DEL PEAK  8(5Q35.2) WILD-TYPE" 
                   TCGA-CS-6669                    TCGA-CS-6670 
"DEL PEAK  8(5Q35.2) WILD-TYPE" "DEL PEAK  8(5Q35.2) WILD-TYPE" 
                   TCGA-DB-5270                    TCGA-DB-5273 
"DEL PEAK  8(5Q35.2) WILD-TYPE" "DEL PEAK  8(5Q35.2) WILD-TYPE" 
                   TCGA-DB-5274                    TCGA-DB-5275 
"DEL PEAK  8(5Q35.2) WILD-TYPE" "DEL PEAK  8(5Q35.2) WILD-TYPE" 
                   TCGA-DB-5276                    TCGA-DB-5277 
  "DEL PEAK  8(5Q35.2) MUTATED"   "DEL PEAK  8(5Q35.2) MUTATED" 
                   TCGA-DB-5278                    TCGA-DB-5279 
"DEL PEAK  8(5Q35.2) WILD-TYPE" "DEL PEAK  8(5Q35.2) WILD-TYPE" 
                   TCGA-DB-5280                    TCGA-DB-5281 
"DEL PEAK  8(5Q35.2) WILD-TYPE"   "DEL PEAK  8(5Q35.2) MUTATED" 
                   TCGA-DH-5140                    TCGA-DH-5141 
  "DEL PEAK  8(5Q35.2) MUTATED" "DEL PEAK  8(5Q35.2) WILD-TYPE" 
                   TCGA-DH-5142                    TCGA-DH-5143 
"DEL PEAK  8(5Q35.2) WILD-TYPE" "DEL PEAK  8(5Q35.2) WILD-TYPE" 
                   TCGA-DH-5144                    TCGA-DU-5847 
"DEL PEAK  8(5Q35.2) WILD-TYPE" "DEL PEAK  8(5Q35.2) WILD-TYPE" 
                   TCGA-DU-5849                    TCGA-DU-5851 
"DEL PEAK  8(5Q35.2) WILD-TYPE" "DEL PEAK  8(5Q35.2) WILD-TYPE" 
                   TCGA-DU-5852                    TCGA-DU-5853 
  "DEL PEAK  8(5Q35.2) MUTATED" "DEL PEAK  8(5Q35.2) WILD-TYPE" 
                   TCGA-DU-5854                    TCGA-DU-5855 
"DEL PEAK  8(5Q35.2) WILD-TYPE" "DEL PEAK  8(5Q35.2) WILD-TYPE" 
                   TCGA-DU-5870                    TCGA-DU-5871 
"DEL PEAK  8(5Q35.2) WILD-TYPE" "DEL PEAK  8(5Q35.2) WILD-TYPE" 
                   TCGA-DU-5872                    TCGA-DU-5874 
"DEL PEAK  8(5Q35.2) WILD-TYPE" "DEL PEAK  8(5Q35.2) WILD-TYPE" 
                   TCGA-DU-6392                    TCGA-DU-6393 
"DEL PEAK  8(5Q35.2) WILD-TYPE" "DEL PEAK  8(5Q35.2) WILD-TYPE" 
                   TCGA-DU-6394                    TCGA-DU-6395 
"DEL PEAK  8(5Q35.2) WILD-TYPE" "DEL PEAK  8(5Q35.2) WILD-TYPE" 
                   TCGA-DU-6396                    TCGA-DU-6397 
"DEL PEAK  8(5Q35.2) WILD-TYPE" "DEL PEAK  8(5Q35.2) WILD-TYPE" 
                   TCGA-DU-6399                    TCGA-DU-6400 
  "DEL PEAK  8(5Q35.2) MUTATED" "DEL PEAK  8(5Q35.2) WILD-TYPE" 
                   TCGA-DU-6401                    TCGA-DU-6402 
  "DEL PEAK  8(5Q35.2) MUTATED" "DEL PEAK  8(5Q35.2) WILD-TYPE" 
                   TCGA-DU-6403                    TCGA-DU-6404 
"DEL PEAK  8(5Q35.2) WILD-TYPE" "DEL PEAK  8(5Q35.2) WILD-TYPE" 
                   TCGA-DU-6405                    TCGA-DU-6406 
"DEL PEAK  8(5Q35.2) WILD-TYPE" "DEL PEAK  8(5Q35.2) WILD-TYPE" 
                   TCGA-DU-6407                    TCGA-DU-6408 
"DEL PEAK  8(5Q35.2) WILD-TYPE"   "DEL PEAK  8(5Q35.2) MUTATED" 
                   TCGA-DU-6410                    TCGA-DU-6542 
"DEL PEAK  8(5Q35.2) WILD-TYPE" "DEL PEAK  8(5Q35.2) WILD-TYPE" 
                   TCGA-DU-7006                    TCGA-DU-7007 
"DEL PEAK  8(5Q35.2) WILD-TYPE"   "DEL PEAK  8(5Q35.2) MUTATED" 
                   TCGA-DU-7008                    TCGA-DU-7009 
"DEL PEAK  8(5Q35.2) WILD-TYPE" "DEL PEAK  8(5Q35.2) WILD-TYPE" 
                   TCGA-DU-7010                    TCGA-DU-7011 
  "DEL PEAK  8(5Q35.2) MUTATED" "DEL PEAK  8(5Q35.2) WILD-TYPE" 
                   TCGA-DU-7012                    TCGA-DU-7013 
"DEL PEAK  8(5Q35.2) WILD-TYPE" "DEL PEAK  8(5Q35.2) WILD-TYPE" 
                   TCGA-DU-7014                    TCGA-DU-7015 
"DEL PEAK  8(5Q35.2) WILD-TYPE" "DEL PEAK  8(5Q35.2) WILD-TYPE" 
                   TCGA-DU-7018                    TCGA-DU-7019 
"DEL PEAK  8(5Q35.2) WILD-TYPE" "DEL PEAK  8(5Q35.2) WILD-TYPE" 
                   TCGA-DU-7290                    TCGA-DU-7292 
"DEL PEAK  8(5Q35.2) WILD-TYPE" "DEL PEAK  8(5Q35.2) WILD-TYPE" 
                   TCGA-DU-7294                    TCGA-DU-7298 
"DEL PEAK  8(5Q35.2) WILD-TYPE" "DEL PEAK  8(5Q35.2) WILD-TYPE" 
                   TCGA-DU-7299                    TCGA-DU-7300 
"DEL PEAK  8(5Q35.2) WILD-TYPE" "DEL PEAK  8(5Q35.2) WILD-TYPE" 
                   TCGA-DU-7301                    TCGA-DU-7302 
"DEL PEAK  8(5Q35.2) WILD-TYPE" "DEL PEAK  8(5Q35.2) WILD-TYPE" 
                   TCGA-DU-7304                    TCGA-DU-7306 
"DEL PEAK  8(5Q35.2) WILD-TYPE" "DEL PEAK  8(5Q35.2) WILD-TYPE" 
                   TCGA-DU-7309                    TCGA-E1-5302 
"DEL PEAK  8(5Q35.2) WILD-TYPE"   "DEL PEAK  8(5Q35.2) MUTATED" 
                   TCGA-E1-5303                    TCGA-E1-5304 
"DEL PEAK  8(5Q35.2) WILD-TYPE"   "DEL PEAK  8(5Q35.2) MUTATED" 
                   TCGA-E1-5305                    TCGA-E1-5307 
  "DEL PEAK  8(5Q35.2) MUTATED"   "DEL PEAK  8(5Q35.2) MUTATED" 
                   TCGA-E1-5311                    TCGA-E1-5318 
"DEL PEAK  8(5Q35.2) WILD-TYPE" "DEL PEAK  8(5Q35.2) WILD-TYPE" 
                   TCGA-E1-5319                    TCGA-E1-5322 
"DEL PEAK  8(5Q35.2) WILD-TYPE" "DEL PEAK  8(5Q35.2) WILD-TYPE" 
                   TCGA-EZ-7264                    TCGA-FG-5962 
"DEL PEAK  8(5Q35.2) WILD-TYPE" "DEL PEAK  8(5Q35.2) WILD-TYPE" 
                   TCGA-FG-5963                    TCGA-FG-5964 
  "DEL PEAK  8(5Q35.2) MUTATED" "DEL PEAK  8(5Q35.2) WILD-TYPE" 
                   TCGA-FG-5965                    TCGA-FG-6688 
"DEL PEAK  8(5Q35.2) WILD-TYPE" "DEL PEAK  8(5Q35.2) WILD-TYPE" 
                   TCGA-FG-6689                    TCGA-FG-6690 
"DEL PEAK  8(5Q35.2) WILD-TYPE" "DEL PEAK  8(5Q35.2) WILD-TYPE" 
                   TCGA-FG-6691                    TCGA-FG-6692 
"DEL PEAK  8(5Q35.2) WILD-TYPE" "DEL PEAK  8(5Q35.2) WILD-TYPE" 
                   TCGA-FG-7634                    TCGA-FG-7636 
"DEL PEAK  8(5Q35.2) WILD-TYPE"   "DEL PEAK  8(5Q35.2) MUTATED" 
                   TCGA-FG-7638                    TCGA-FG-7643 
"DEL PEAK  8(5Q35.2) WILD-TYPE" "DEL PEAK  8(5Q35.2) WILD-TYPE" 
                   TCGA-FN-7833                    TCGA-HT-7467 
"DEL PEAK  8(5Q35.2) WILD-TYPE" "DEL PEAK  8(5Q35.2) WILD-TYPE" 
                   TCGA-HT-7468                    TCGA-HT-7470 
"DEL PEAK  8(5Q35.2) WILD-TYPE"   "DEL PEAK  8(5Q35.2) MUTATED" 
                   TCGA-HT-7472                    TCGA-HT-7473 
"DEL PEAK  8(5Q35.2) WILD-TYPE" "DEL PEAK  8(5Q35.2) WILD-TYPE" 
                   TCGA-HT-7474                    TCGA-HT-7475 
"DEL PEAK  8(5Q35.2) WILD-TYPE" "DEL PEAK  8(5Q35.2) WILD-TYPE" 
                   TCGA-HT-7476                    TCGA-HT-7478 
"DEL PEAK  8(5Q35.2) WILD-TYPE" "DEL PEAK  8(5Q35.2) WILD-TYPE" 
                   TCGA-HT-7479                    TCGA-HT-7480 
"DEL PEAK  8(5Q35.2) WILD-TYPE" "DEL PEAK  8(5Q35.2) WILD-TYPE" 
                   TCGA-HT-7481                    TCGA-HT-7482 
"DEL PEAK  8(5Q35.2) WILD-TYPE" "DEL PEAK  8(5Q35.2) WILD-TYPE" 
                   TCGA-HT-7483                    TCGA-HT-7485 
"DEL PEAK  8(5Q35.2) WILD-TYPE" "DEL PEAK  8(5Q35.2) WILD-TYPE" 
                   TCGA-HT-7601                    TCGA-HT-7602 
"DEL PEAK  8(5Q35.2) WILD-TYPE" "DEL PEAK  8(5Q35.2) WILD-TYPE" 
                   TCGA-HT-7603                    TCGA-HT-7604 
"DEL PEAK  8(5Q35.2) WILD-TYPE" "DEL PEAK  8(5Q35.2) WILD-TYPE" 
                   TCGA-HT-7605                    TCGA-HT-7606 
"DEL PEAK  8(5Q35.2) WILD-TYPE" "DEL PEAK  8(5Q35.2) WILD-TYPE" 
                   TCGA-HT-7607                    TCGA-HT-7608 
"DEL PEAK  8(5Q35.2) WILD-TYPE" "DEL PEAK  8(5Q35.2) WILD-TYPE" 
                   TCGA-HT-7609                    TCGA-HT-7610 
  "DEL PEAK  8(5Q35.2) MUTATED" "DEL PEAK  8(5Q35.2) WILD-TYPE" 
                   TCGA-HW-7486                    TCGA-HW-7487 
"DEL PEAK  8(5Q35.2) WILD-TYPE" "DEL PEAK  8(5Q35.2) WILD-TYPE" 
                   TCGA-HW-7489                    TCGA-HW-7490 
  "DEL PEAK  8(5Q35.2) MUTATED" "DEL PEAK  8(5Q35.2) WILD-TYPE" 
                   TCGA-HW-7491                    TCGA-HW-7493 
"DEL PEAK  8(5Q35.2) WILD-TYPE" "DEL PEAK  8(5Q35.2) WILD-TYPE" 
                   TCGA-HW-7495                    TCGA-IK-7675 
"DEL PEAK  8(5Q35.2) WILD-TYPE"   "DEL PEAK  8(5Q35.2) MUTATED" 
                   TCGA-IK-8125 
"DEL PEAK  8(5Q35.2) WILD-TYPE" 
                   TCGA-CS-4938                    TCGA-CS-4941 
"DEL PEAK  8(5Q35.2) WILD-TYPE" "DEL PEAK  8(5Q35.2) WILD-TYPE" 
                   TCGA-CS-4942                    TCGA-CS-4943 
"DEL PEAK  8(5Q35.2) WILD-TYPE" "DEL PEAK  8(5Q35.2) WILD-TYPE" 
                   TCGA-CS-4944                    TCGA-CS-5390 
"DEL PEAK  8(5Q35.2) WILD-TYPE" "DEL PEAK  8(5Q35.2) WILD-TYPE" 
                   TCGA-CS-5393                    TCGA-CS-5394 
"DEL PEAK  8(5Q35.2) WILD-TYPE" "DEL PEAK  8(5Q35.2) WILD-TYPE" 
                   TCGA-CS-5395                    TCGA-CS-5396 
"DEL PEAK  8(5Q35.2) WILD-TYPE" "DEL PEAK  8(5Q35.2) WILD-TYPE" 
                   TCGA-CS-5397                    TCGA-CS-6186 
"DEL PEAK  8(5Q35.2) WILD-TYPE" "DEL PEAK  8(5Q35.2) WILD-TYPE" 
                   TCGA-CS-6188                    TCGA-CS-6290 
"DEL PEAK  8(5Q35.2) WILD-TYPE" "DEL PEAK  8(5Q35.2) WILD-TYPE" 
                   TCGA-CS-6665                    TCGA-CS-6666 
  "DEL PEAK  8(5Q35.2) MUTATED"   "DEL PEAK  8(5Q35.2) MUTATED" 
                   TCGA-CS-6667                    TCGA-CS-6668 
"DEL PEAK  8(5Q35.2) WILD-TYPE" "DEL PEAK  8(5Q35.2) WILD-TYPE" 
                   TCGA-CS-6669                    TCGA-CS-6670 
"DEL PEAK  8(5Q35.2) WILD-TYPE" "DEL PEAK  8(5Q35.2) WILD-TYPE" 
                   TCGA-DB-5270                    TCGA-DB-5273 
"DEL PEAK  8(5Q35.2) WILD-TYPE" "DEL PEAK  8(5Q35.2) WILD-TYPE" 
                   TCGA-DB-5274                    TCGA-DB-5275 
"DEL PEAK  8(5Q35.2) WILD-TYPE" "DEL PEAK  8(5Q35.2) WILD-TYPE" 
                   TCGA-DB-5276                    TCGA-DB-5277 
  "DEL PEAK  8(5Q35.2) MUTATED"   "DEL PEAK  8(5Q35.2) MUTATED" 
                   TCGA-DB-5278                    TCGA-DB-5279 
"DEL PEAK  8(5Q35.2) WILD-TYPE" "DEL PEAK  8(5Q35.2) WILD-TYPE" 
                   TCGA-DB-5280                    TCGA-DB-5281 
"DEL PEAK  8(5Q35.2) WILD-TYPE"   "DEL PEAK  8(5Q35.2) MUTATED" 
                   TCGA-DH-5140                    TCGA-DH-5141 
  "DEL PEAK  8(5Q35.2) MUTATED" "DEL PEAK  8(5Q35.2) WILD-TYPE" 
                   TCGA-DH-5142                    TCGA-DH-5143 
"DEL PEAK  8(5Q35.2) WILD-TYPE" "DEL PEAK  8(5Q35.2) WILD-TYPE" 
                   TCGA-DH-5144                    TCGA-DU-5847 
"DEL PEAK  8(5Q35.2) WILD-TYPE" "DEL PEAK  8(5Q35.2) WILD-TYPE" 
                   TCGA-DU-5849                    TCGA-DU-5851 
"DEL PEAK  8(5Q35.2) WILD-TYPE" "DEL PEAK  8(5Q35.2) WILD-TYPE" 
                   TCGA-DU-5852                    TCGA-DU-5853 
  "DEL PEAK  8(5Q35.2) MUTATED" "DEL PEAK  8(5Q35.2) WILD-TYPE" 
                   TCGA-DU-5854                    TCGA-DU-5855 
"DEL PEAK  8(5Q35.2) WILD-TYPE" "DEL PEAK  8(5Q35.2) WILD-TYPE" 
                   TCGA-DU-5870                    TCGA-DU-5871 
"DEL PEAK  8(5Q35.2) WILD-TYPE" "DEL PEAK  8(5Q35.2) WILD-TYPE" 
                   TCGA-DU-5872                    TCGA-DU-5874 
"DEL PEAK  8(5Q35.2) WILD-TYPE" "DEL PEAK  8(5Q35.2) WILD-TYPE" 
                   TCGA-DU-6392                    TCGA-DU-6393 
"DEL PEAK  8(5Q35.2) WILD-TYPE" "DEL PEAK  8(5Q35.2) WILD-TYPE" 
                   TCGA-DU-6394                    TCGA-DU-6395 
"DEL PEAK  8(5Q35.2) WILD-TYPE" "DEL PEAK  8(5Q35.2) WILD-TYPE" 
                   TCGA-DU-6396                    TCGA-DU-6397 
"DEL PEAK  8(5Q35.2) WILD-TYPE" "DEL PEAK  8(5Q35.2) WILD-TYPE" 
                   TCGA-DU-6399                    TCGA-DU-6400 
  "DEL PEAK  8(5Q35.2) MUTATED" "DEL PEAK  8(5Q35.2) WILD-TYPE" 
                   TCGA-DU-6401                    TCGA-DU-6402 
  "DEL PEAK  8(5Q35.2) MUTATED" "DEL PEAK  8(5Q35.2) WILD-TYPE" 
                   TCGA-DU-6403                    TCGA-DU-6404 
"DEL PEAK  8(5Q35.2) WILD-TYPE" "DEL PEAK  8(5Q35.2) WILD-TYPE" 
                   TCGA-DU-6405                    TCGA-DU-6406 
"DEL PEAK  8(5Q35.2) WILD-TYPE" "DEL PEAK  8(5Q35.2) WILD-TYPE" 
                   TCGA-DU-6407                    TCGA-DU-6408 
"DEL PEAK  8(5Q35.2) WILD-TYPE"   "DEL PEAK  8(5Q35.2) MUTATED" 
                   TCGA-DU-6410                    TCGA-DU-6542 
"DEL PEAK  8(5Q35.2) WILD-TYPE" "DEL PEAK  8(5Q35.2) WILD-TYPE" 
                   TCGA-DU-7006                    TCGA-DU-7007 
"DEL PEAK  8(5Q35.2) WILD-TYPE"   "DEL PEAK  8(5Q35.2) MUTATED" 
                   TCGA-DU-7008                    TCGA-DU-7009 
"DEL PEAK  8(5Q35.2) WILD-TYPE" "DEL PEAK  8(5Q35.2) WILD-TYPE" 
                   TCGA-DU-7010                    TCGA-DU-7011 
  "DEL PEAK  8(5Q35.2) MUTATED" "DEL PEAK  8(5Q35.2) WILD-TYPE" 
                   TCGA-DU-7012                    TCGA-DU-7013 
"DEL PEAK  8(5Q35.2) WILD-TYPE" "DEL PEAK  8(5Q35.2) WILD-TYPE" 
                   TCGA-DU-7014                    TCGA-DU-7015 
"DEL PEAK  8(5Q35.2) WILD-TYPE" "DEL PEAK  8(5Q35.2) WILD-TYPE" 
                   TCGA-DU-7018                    TCGA-DU-7019 
"DEL PEAK  8(5Q35.2) WILD-TYPE" "DEL PEAK  8(5Q35.2) WILD-TYPE" 
                   TCGA-DU-7290                    TCGA-DU-7292 
"DEL PEAK  8(5Q35.2) WILD-TYPE" "DEL PEAK  8(5Q35.2) WILD-TYPE" 
                   TCGA-DU-7294                    TCGA-DU-7298 
"DEL PEAK  8(5Q35.2) WILD-TYPE" "DEL PEAK  8(5Q35.2) WILD-TYPE" 
                   TCGA-DU-7299                    TCGA-DU-7300 
"DEL PEAK  8(5Q35.2) WILD-TYPE" "DEL PEAK  8(5Q35.2) WILD-TYPE" 
                   TCGA-DU-7301                    TCGA-DU-7302 
"DEL PEAK  8(5Q35.2) WILD-TYPE" "DEL PEAK  8(5Q35.2) WILD-TYPE" 
                   TCGA-DU-7304                    TCGA-DU-7306 
"DEL PEAK  8(5Q35.2) WILD-TYPE" "DEL PEAK  8(5Q35.2) WILD-TYPE" 
                   TCGA-DU-7309                    TCGA-E1-5302 
"DEL PEAK  8(5Q35.2) WILD-TYPE"   "DEL PEAK  8(5Q35.2) MUTATED" 
                   TCGA-E1-5303                    TCGA-E1-5304 
"DEL PEAK  8(5Q35.2) WILD-TYPE"   "DEL PEAK  8(5Q35.2) MUTATED" 
                   TCGA-E1-5305                    TCGA-E1-5307 
  "DEL PEAK  8(5Q35.2) MUTATED"   "DEL PEAK  8(5Q35.2) MUTATED" 
                   TCGA-E1-5311                    TCGA-E1-5318 
"DEL PEAK  8(5Q35.2) WILD-TYPE" "DEL PEAK  8(5Q35.2) WILD-TYPE" 
                   TCGA-E1-5319                    TCGA-E1-5322 
"DEL PEAK  8(5Q35.2) WILD-TYPE" "DEL PEAK  8(5Q35.2) WILD-TYPE" 
                   TCGA-EZ-7264                    TCGA-FG-5962 
"DEL PEAK  8(5Q35.2) WILD-TYPE" "DEL PEAK  8(5Q35.2) WILD-TYPE" 
                   TCGA-FG-5963                    TCGA-FG-5964 
  "DEL PEAK  8(5Q35.2) MUTATED" "DEL PEAK  8(5Q35.2) WILD-TYPE" 
                   TCGA-FG-5965                    TCGA-FG-6688 
"DEL PEAK  8(5Q35.2) WILD-TYPE" "DEL PEAK  8(5Q35.2) WILD-TYPE" 
                   TCGA-FG-6689                    TCGA-FG-6690 
"DEL PEAK  8(5Q35.2) WILD-TYPE" "DEL PEAK  8(5Q35.2) WILD-TYPE" 
                   TCGA-FG-6691                    TCGA-FG-6692 
"DEL PEAK  8(5Q35.2) WILD-TYPE" "DEL PEAK  8(5Q35.2) WILD-TYPE" 
                   TCGA-FG-7634                    TCGA-FG-7636 
"DEL PEAK  8(5Q35.2) WILD-TYPE"   "DEL PEAK  8(5Q35.2) MUTATED" 
                   TCGA-FG-7638                    TCGA-FG-7643 
"DEL PEAK  8(5Q35.2) WILD-TYPE" "DEL PEAK  8(5Q35.2) WILD-TYPE" 
                   TCGA-FN-7833                    TCGA-HT-7467 
"DEL PEAK  8(5Q35.2) WILD-TYPE" "DEL PEAK  8(5Q35.2) WILD-TYPE" 
                   TCGA-HT-7468                    TCGA-HT-7470 
"DEL PEAK  8(5Q35.2) WILD-TYPE"   "DEL PEAK  8(5Q35.2) MUTATED" 
                   TCGA-HT-7472                    TCGA-HT-7473 
"DEL PEAK  8(5Q35.2) WILD-TYPE" "DEL PEAK  8(5Q35.2) WILD-TYPE" 
                   TCGA-HT-7474                    TCGA-HT-7475 
"DEL PEAK  8(5Q35.2) WILD-TYPE" "DEL PEAK  8(5Q35.2) WILD-TYPE" 
                   TCGA-HT-7476                    TCGA-HT-7478 
"DEL PEAK  8(5Q35.2) WILD-TYPE" "DEL PEAK  8(5Q35.2) WILD-TYPE" 
                   TCGA-HT-7479                    TCGA-HT-7480 
"DEL PEAK  8(5Q35.2) WILD-TYPE" "DEL PEAK  8(5Q35.2) WILD-TYPE" 
                   TCGA-HT-7481                    TCGA-HT-7482 
"DEL PEAK  8(5Q35.2) WILD-TYPE" "DEL PEAK  8(5Q35.2) WILD-TYPE" 
                   TCGA-HT-7483                    TCGA-HT-7485 
"DEL PEAK  8(5Q35.2) WILD-TYPE" "DEL PEAK  8(5Q35.2) WILD-TYPE" 
                   TCGA-HT-7601                    TCGA-HT-7602 
"DEL PEAK  8(5Q35.2) WILD-TYPE" "DEL PEAK  8(5Q35.2) WILD-TYPE" 
                   TCGA-HT-7603                    TCGA-HT-7604 
"DEL PEAK  8(5Q35.2) WILD-TYPE" "DEL PEAK  8(5Q35.2) WILD-TYPE" 
                   TCGA-HT-7605                    TCGA-HT-7606 
"DEL PEAK  8(5Q35.2) WILD-TYPE" "DEL PEAK  8(5Q35.2) WILD-TYPE" 
                   TCGA-HT-7607                    TCGA-HT-7608 
"DEL PEAK  8(5Q35.2) WILD-TYPE" "DEL PEAK  8(5Q35.2) WILD-TYPE" 
                   TCGA-HT-7609                    TCGA-HT-7610 
  "DEL PEAK  8(5Q35.2) MUTATED" "DEL PEAK  8(5Q35.2) WILD-TYPE" 
                   TCGA-HW-7486                    TCGA-HW-7487 
"DEL PEAK  8(5Q35.2) WILD-TYPE" "DEL PEAK  8(5Q35.2) WILD-TYPE" 
                   TCGA-HW-7489                    TCGA-HW-7490 
  "DEL PEAK  8(5Q35.2) MUTATED" "DEL PEAK  8(5Q35.2) WILD-TYPE" 
                   TCGA-HW-7491                    TCGA-HW-7493 
"DEL PEAK  8(5Q35.2) WILD-TYPE" "DEL PEAK  8(5Q35.2) WILD-TYPE" 
                   TCGA-HW-7495                    TCGA-IK-7675 
"DEL PEAK  8(5Q35.2) WILD-TYPE"   "DEL PEAK  8(5Q35.2) MUTATED" 
                   TCGA-IK-8125 
"DEL PEAK  8(5Q35.2) WILD-TYPE" 
[1] "hr=" "1.8"
D22V2, continuous
D22V3, binary
[1] "tbl2"
                               cls
clus                            [,1] [,2]
  DEL PEAK  8(5Q35.2) MUTATED      7   15
  DEL PEAK  8(5Q35.2) WILD-TYPE   55   68
        clus
vv       DEL PEAK  8(5Q35.2) MUTATED DEL PEAK  8(5Q35.2) WILD-TYPE
  FEMALE                           7                            55
  MALE                            15                            68
D22V4, continuous
D22V5, multiclass
                   clus
vv                  DEL PEAK  8(5Q35.2) MUTATED DEL PEAK  8(5Q35.2) WILD-TYPE
  ASTROCYTOMA                                11                            39
  OLIGOASTROCYTOMA                            6                            30
  OLIGODENDROGLIOMA                           5                            53
D22V6, binary
[1] "tbl2"
                               cls
clus                            [,1] [,2]
  DEL PEAK  8(5Q35.2) MUTATED      5   17
  DEL PEAK  8(5Q35.2) WILD-TYPE   54   69
     clus
vv    DEL PEAK  8(5Q35.2) MUTATED DEL PEAK  8(5Q35.2) WILD-TYPE
  NO                           17                            69
  YES                           5                            54
D22V7, binary
[1] "tbl2"
                               cls
clus                            [,1] [,2]
  DEL PEAK  8(5Q35.2) MUTATED     10   12
  DEL PEAK  8(5Q35.2) WILD-TYPE   64   59
     clus
vv    DEL PEAK  8(5Q35.2) MUTATED DEL PEAK  8(5Q35.2) WILD-TYPE
  NO                           12                            59
  YES                          10                            64

Clustering(23) Variable = Del Peak  9(6p24.1) mutation analysis
D23V1, survival
                   TCGA-CS-4938                    TCGA-CS-4941 
"DEL PEAK  9(6P24.1) WILD-TYPE" "DEL PEAK  9(6P24.1) WILD-TYPE" 
                   TCGA-CS-4942                    TCGA-CS-4943 
"DEL PEAK  9(6P24.1) WILD-TYPE" "DEL PEAK  9(6P24.1) WILD-TYPE" 
                   TCGA-CS-4944                    TCGA-CS-5390 
"DEL PEAK  9(6P24.1) WILD-TYPE" "DEL PEAK  9(6P24.1) WILD-TYPE" 
                   TCGA-CS-5393                    TCGA-CS-5394 
"DEL PEAK  9(6P24.1) WILD-TYPE" "DEL PEAK  9(6P24.1) WILD-TYPE" 
                   TCGA-CS-5395                    TCGA-CS-5396 
"DEL PEAK  9(6P24.1) WILD-TYPE" "DEL PEAK  9(6P24.1) WILD-TYPE" 
                   TCGA-CS-5397                    TCGA-CS-6186 
  "DEL PEAK  9(6P24.1) MUTATED" "DEL PEAK  9(6P24.1) WILD-TYPE" 
                   TCGA-CS-6188                    TCGA-CS-6290 
  "DEL PEAK  9(6P24.1) MUTATED" "DEL PEAK  9(6P24.1) WILD-TYPE" 
                   TCGA-CS-6665                    TCGA-CS-6666 
"DEL PEAK  9(6P24.1) WILD-TYPE"   "DEL PEAK  9(6P24.1) MUTATED" 
                   TCGA-CS-6667                    TCGA-CS-6668 
"DEL PEAK  9(6P24.1) WILD-TYPE" "DEL PEAK  9(6P24.1) WILD-TYPE" 
                   TCGA-CS-6669                    TCGA-CS-6670 
"DEL PEAK  9(6P24.1) WILD-TYPE" "DEL PEAK  9(6P24.1) WILD-TYPE" 
                   TCGA-DB-5270                    TCGA-DB-5273 
"DEL PEAK  9(6P24.1) WILD-TYPE" "DEL PEAK  9(6P24.1) WILD-TYPE" 
                   TCGA-DB-5274                    TCGA-DB-5275 
"DEL PEAK  9(6P24.1) WILD-TYPE" "DEL PEAK  9(6P24.1) WILD-TYPE" 
                   TCGA-DB-5276                    TCGA-DB-5277 
"DEL PEAK  9(6P24.1) WILD-TYPE"   "DEL PEAK  9(6P24.1) MUTATED" 
                   TCGA-DB-5278                    TCGA-DB-5279 
"DEL PEAK  9(6P24.1) WILD-TYPE" "DEL PEAK  9(6P24.1) WILD-TYPE" 
                   TCGA-DB-5280                    TCGA-DB-5281 
"DEL PEAK  9(6P24.1) WILD-TYPE" "DEL PEAK  9(6P24.1) WILD-TYPE" 
                   TCGA-DH-5140                    TCGA-DH-5141 
"DEL PEAK  9(6P24.1) WILD-TYPE" "DEL PEAK  9(6P24.1) WILD-TYPE" 
                   TCGA-DH-5142                    TCGA-DH-5143 
"DEL PEAK  9(6P24.1) WILD-TYPE" "DEL PEAK  9(6P24.1) WILD-TYPE" 
                   TCGA-DH-5144                    TCGA-DU-5847 
"DEL PEAK  9(6P24.1) WILD-TYPE" "DEL PEAK  9(6P24.1) WILD-TYPE" 
                   TCGA-DU-5849                    TCGA-DU-5851 
"DEL PEAK  9(6P24.1) WILD-TYPE" "DEL PEAK  9(6P24.1) WILD-TYPE" 
                   TCGA-DU-5852                    TCGA-DU-5853 
"DEL PEAK  9(6P24.1) WILD-TYPE" "DEL PEAK  9(6P24.1) WILD-TYPE" 
                   TCGA-DU-5854                    TCGA-DU-5855 
"DEL PEAK  9(6P24.1) WILD-TYPE" "DEL PEAK  9(6P24.1) WILD-TYPE" 
                   TCGA-DU-5870                    TCGA-DU-5871 
"DEL PEAK  9(6P24.1) WILD-TYPE" "DEL PEAK  9(6P24.1) WILD-TYPE" 
                   TCGA-DU-5872                    TCGA-DU-5874 
"DEL PEAK  9(6P24.1) WILD-TYPE" "DEL PEAK  9(6P24.1) WILD-TYPE" 
                   TCGA-DU-6392                    TCGA-DU-6393 
"DEL PEAK  9(6P24.1) WILD-TYPE" "DEL PEAK  9(6P24.1) WILD-TYPE" 
                   TCGA-DU-6394                    TCGA-DU-6395 
"DEL PEAK  9(6P24.1) WILD-TYPE" "DEL PEAK  9(6P24.1) WILD-TYPE" 
                   TCGA-DU-6396                    TCGA-DU-6397 
"DEL PEAK  9(6P24.1) WILD-TYPE" "DEL PEAK  9(6P24.1) WILD-TYPE" 
                   TCGA-DU-6399                    TCGA-DU-6400 
"DEL PEAK  9(6P24.1) WILD-TYPE"   "DEL PEAK  9(6P24.1) MUTATED" 
                   TCGA-DU-6401                    TCGA-DU-6402 
"DEL PEAK  9(6P24.1) WILD-TYPE"   "DEL PEAK  9(6P24.1) MUTATED" 
                   TCGA-DU-6403                    TCGA-DU-6404 
"DEL PEAK  9(6P24.1) WILD-TYPE" "DEL PEAK  9(6P24.1) WILD-TYPE" 
                   TCGA-DU-6405                    TCGA-DU-6406 
"DEL PEAK  9(6P24.1) WILD-TYPE" "DEL PEAK  9(6P24.1) WILD-TYPE" 
                   TCGA-DU-6407                    TCGA-DU-6408 
  "DEL PEAK  9(6P24.1) MUTATED" "DEL PEAK  9(6P24.1) WILD-TYPE" 
                   TCGA-DU-6410                    TCGA-DU-6542 
"DEL PEAK  9(6P24.1) WILD-TYPE" "DEL PEAK  9(6P24.1) WILD-TYPE" 
                   TCGA-DU-7006                    TCGA-DU-7007 
"DEL PEAK  9(6P24.1) WILD-TYPE" "DEL PEAK  9(6P24.1) WILD-TYPE" 
                   TCGA-DU-7008                    TCGA-DU-7009 
"DEL PEAK  9(6P24.1) WILD-TYPE" "DEL PEAK  9(6P24.1) WILD-TYPE" 
                   TCGA-DU-7010                    TCGA-DU-7011 
"DEL PEAK  9(6P24.1) WILD-TYPE" "DEL PEAK  9(6P24.1) WILD-TYPE" 
                   TCGA-DU-7012                    TCGA-DU-7013 
"DEL PEAK  9(6P24.1) WILD-TYPE" "DEL PEAK  9(6P24.1) WILD-TYPE" 
                   TCGA-DU-7014                    TCGA-DU-7015 
"DEL PEAK  9(6P24.1) WILD-TYPE" "DEL PEAK  9(6P24.1) WILD-TYPE" 
                   TCGA-DU-7018                    TCGA-DU-7019 
"DEL PEAK  9(6P24.1) WILD-TYPE" "DEL PEAK  9(6P24.1) WILD-TYPE" 
                   TCGA-DU-7290                    TCGA-DU-7292 
"DEL PEAK  9(6P24.1) WILD-TYPE" "DEL PEAK  9(6P24.1) WILD-TYPE" 
                   TCGA-DU-7294                    TCGA-DU-7298 
"DEL PEAK  9(6P24.1) WILD-TYPE" "DEL PEAK  9(6P24.1) WILD-TYPE" 
                   TCGA-DU-7299                    TCGA-DU-7300 
"DEL PEAK  9(6P24.1) WILD-TYPE" "DEL PEAK  9(6P24.1) WILD-TYPE" 
                   TCGA-DU-7301                    TCGA-DU-7302 
"DEL PEAK  9(6P24.1) WILD-TYPE" "DEL PEAK  9(6P24.1) WILD-TYPE" 
                   TCGA-DU-7304                    TCGA-DU-7306 
"DEL PEAK  9(6P24.1) WILD-TYPE" "DEL PEAK  9(6P24.1) WILD-TYPE" 
                   TCGA-DU-7309                    TCGA-E1-5302 
"DEL PEAK  9(6P24.1) WILD-TYPE" "DEL PEAK  9(6P24.1) WILD-TYPE" 
                   TCGA-E1-5303                    TCGA-E1-5304 
"DEL PEAK  9(6P24.1) WILD-TYPE"   "DEL PEAK  9(6P24.1) MUTATED" 
                   TCGA-E1-5305                    TCGA-E1-5307 
"DEL PEAK  9(6P24.1) WILD-TYPE" "DEL PEAK  9(6P24.1) WILD-TYPE" 
                   TCGA-E1-5311                    TCGA-E1-5318 
"DEL PEAK  9(6P24.1) WILD-TYPE" "DEL PEAK  9(6P24.1) WILD-TYPE" 
                   TCGA-E1-5319                    TCGA-E1-5322 
"DEL PEAK  9(6P24.1) WILD-TYPE" "DEL PEAK  9(6P24.1) WILD-TYPE" 
                   TCGA-EZ-7264                    TCGA-FG-5962 
"DEL PEAK  9(6P24.1) WILD-TYPE" "DEL PEAK  9(6P24.1) WILD-TYPE" 
                   TCGA-FG-5963                    TCGA-FG-5964 
  "DEL PEAK  9(6P24.1) MUTATED" "DEL PEAK  9(6P24.1) WILD-TYPE" 
                   TCGA-FG-5965                    TCGA-FG-6688 
"DEL PEAK  9(6P24.1) WILD-TYPE" "DEL PEAK  9(6P24.1) WILD-TYPE" 
                   TCGA-FG-6689                    TCGA-FG-6690 
"DEL PEAK  9(6P24.1) WILD-TYPE"   "DEL PEAK  9(6P24.1) MUTATED" 
                   TCGA-FG-6691                    TCGA-FG-6692 
"DEL PEAK  9(6P24.1) WILD-TYPE" "DEL PEAK  9(6P24.1) WILD-TYPE" 
                   TCGA-FG-7634                    TCGA-FG-7636 
"DEL PEAK  9(6P24.1) WILD-TYPE"   "DEL PEAK  9(6P24.1) MUTATED" 
                   TCGA-FG-7638                    TCGA-FG-7643 
"DEL PEAK  9(6P24.1) WILD-TYPE" "DEL PEAK  9(6P24.1) WILD-TYPE" 
                   TCGA-FN-7833                    TCGA-HT-7467 
"DEL PEAK  9(6P24.1) WILD-TYPE" "DEL PEAK  9(6P24.1) WILD-TYPE" 
                   TCGA-HT-7468                    TCGA-HT-7470 
"DEL PEAK  9(6P24.1) WILD-TYPE" "DEL PEAK  9(6P24.1) WILD-TYPE" 
                   TCGA-HT-7472                    TCGA-HT-7473 
"DEL PEAK  9(6P24.1) WILD-TYPE" "DEL PEAK  9(6P24.1) WILD-TYPE" 
                   TCGA-HT-7474                    TCGA-HT-7475 
"DEL PEAK  9(6P24.1) WILD-TYPE" "DEL PEAK  9(6P24.1) WILD-TYPE" 
                   TCGA-HT-7476                    TCGA-HT-7478 
"DEL PEAK  9(6P24.1) WILD-TYPE" "DEL PEAK  9(6P24.1) WILD-TYPE" 
                   TCGA-HT-7479                    TCGA-HT-7480 
"DEL PEAK  9(6P24.1) WILD-TYPE" "DEL PEAK  9(6P24.1) WILD-TYPE" 
                   TCGA-HT-7481                    TCGA-HT-7482 
"DEL PEAK  9(6P24.1) WILD-TYPE" "DEL PEAK  9(6P24.1) WILD-TYPE" 
                   TCGA-HT-7483                    TCGA-HT-7485 
"DEL PEAK  9(6P24.1) WILD-TYPE" "DEL PEAK  9(6P24.1) WILD-TYPE" 
                   TCGA-HT-7601                    TCGA-HT-7602 
"DEL PEAK  9(6P24.1) WILD-TYPE" "DEL PEAK  9(6P24.1) WILD-TYPE" 
                   TCGA-HT-7603                    TCGA-HT-7604 
"DEL PEAK  9(6P24.1) WILD-TYPE"   "DEL PEAK  9(6P24.1) MUTATED" 
                   TCGA-HT-7605                    TCGA-HT-7606 
"DEL PEAK  9(6P24.1) WILD-TYPE" "DEL PEAK  9(6P24.1) WILD-TYPE" 
                   TCGA-HT-7607                    TCGA-HT-7608 
"DEL PEAK  9(6P24.1) WILD-TYPE" "DEL PEAK  9(6P24.1) WILD-TYPE" 
                   TCGA-HT-7609                    TCGA-HT-7610 
"DEL PEAK  9(6P24.1) WILD-TYPE" "DEL PEAK  9(6P24.1) WILD-TYPE" 
                   TCGA-HW-7486                    TCGA-HW-7487 
"DEL PEAK  9(6P24.1) WILD-TYPE" "DEL PEAK  9(6P24.1) WILD-TYPE" 
                   TCGA-HW-7489                    TCGA-HW-7490 
"DEL PEAK  9(6P24.1) WILD-TYPE" "DEL PEAK  9(6P24.1) WILD-TYPE" 
                   TCGA-HW-7491                    TCGA-HW-7493 
"DEL PEAK  9(6P24.1) WILD-TYPE"   "DEL PEAK  9(6P24.1) MUTATED" 
                   TCGA-HW-7495                    TCGA-IK-7675 
"DEL PEAK  9(6P24.1) WILD-TYPE"   "DEL PEAK  9(6P24.1) MUTATED" 
                   TCGA-IK-8125 
"DEL PEAK  9(6P24.1) WILD-TYPE" 
                   TCGA-CS-4938                    TCGA-CS-4941 
"DEL PEAK  9(6P24.1) WILD-TYPE" "DEL PEAK  9(6P24.1) WILD-TYPE" 
                   TCGA-CS-4942                    TCGA-CS-4943 
"DEL PEAK  9(6P24.1) WILD-TYPE" "DEL PEAK  9(6P24.1) WILD-TYPE" 
                   TCGA-CS-4944                    TCGA-CS-5390 
"DEL PEAK  9(6P24.1) WILD-TYPE" "DEL PEAK  9(6P24.1) WILD-TYPE" 
                   TCGA-CS-5393                    TCGA-CS-5394 
"DEL PEAK  9(6P24.1) WILD-TYPE" "DEL PEAK  9(6P24.1) WILD-TYPE" 
                   TCGA-CS-5395                    TCGA-CS-5396 
"DEL PEAK  9(6P24.1) WILD-TYPE" "DEL PEAK  9(6P24.1) WILD-TYPE" 
                   TCGA-CS-5397                    TCGA-CS-6186 
  "DEL PEAK  9(6P24.1) MUTATED" "DEL PEAK  9(6P24.1) WILD-TYPE" 
                   TCGA-CS-6188                    TCGA-CS-6290 
  "DEL PEAK  9(6P24.1) MUTATED" "DEL PEAK  9(6P24.1) WILD-TYPE" 
                   TCGA-CS-6665                    TCGA-CS-6666 
"DEL PEAK  9(6P24.1) WILD-TYPE"   "DEL PEAK  9(6P24.1) MUTATED" 
                   TCGA-CS-6667                    TCGA-CS-6668 
"DEL PEAK  9(6P24.1) WILD-TYPE" "DEL PEAK  9(6P24.1) WILD-TYPE" 
                   TCGA-CS-6669                    TCGA-CS-6670 
"DEL PEAK  9(6P24.1) WILD-TYPE" "DEL PEAK  9(6P24.1) WILD-TYPE" 
                   TCGA-DB-5270                    TCGA-DB-5273 
"DEL PEAK  9(6P24.1) WILD-TYPE" "DEL PEAK  9(6P24.1) WILD-TYPE" 
                   TCGA-DB-5274                    TCGA-DB-5275 
"DEL PEAK  9(6P24.1) WILD-TYPE" "DEL PEAK  9(6P24.1) WILD-TYPE" 
                   TCGA-DB-5276                    TCGA-DB-5277 
"DEL PEAK  9(6P24.1) WILD-TYPE"   "DEL PEAK  9(6P24.1) MUTATED" 
                   TCGA-DB-5278                    TCGA-DB-5279 
"DEL PEAK  9(6P24.1) WILD-TYPE" "DEL PEAK  9(6P24.1) WILD-TYPE" 
                   TCGA-DB-5280                    TCGA-DB-5281 
"DEL PEAK  9(6P24.1) WILD-TYPE" "DEL PEAK  9(6P24.1) WILD-TYPE" 
                   TCGA-DH-5140                    TCGA-DH-5141 
"DEL PEAK  9(6P24.1) WILD-TYPE" "DEL PEAK  9(6P24.1) WILD-TYPE" 
                   TCGA-DH-5142                    TCGA-DH-5143 
"DEL PEAK  9(6P24.1) WILD-TYPE" "DEL PEAK  9(6P24.1) WILD-TYPE" 
                   TCGA-DH-5144                    TCGA-DU-5847 
"DEL PEAK  9(6P24.1) WILD-TYPE" "DEL PEAK  9(6P24.1) WILD-TYPE" 
                   TCGA-DU-5849                    TCGA-DU-5851 
"DEL PEAK  9(6P24.1) WILD-TYPE" "DEL PEAK  9(6P24.1) WILD-TYPE" 
                   TCGA-DU-5852                    TCGA-DU-5853 
"DEL PEAK  9(6P24.1) WILD-TYPE" "DEL PEAK  9(6P24.1) WILD-TYPE" 
                   TCGA-DU-5854                    TCGA-DU-5855 
"DEL PEAK  9(6P24.1) WILD-TYPE" "DEL PEAK  9(6P24.1) WILD-TYPE" 
                   TCGA-DU-5870                    TCGA-DU-5871 
"DEL PEAK  9(6P24.1) WILD-TYPE" "DEL PEAK  9(6P24.1) WILD-TYPE" 
                   TCGA-DU-5872                    TCGA-DU-5874 
"DEL PEAK  9(6P24.1) WILD-TYPE" "DEL PEAK  9(6P24.1) WILD-TYPE" 
                   TCGA-DU-6392                    TCGA-DU-6393 
"DEL PEAK  9(6P24.1) WILD-TYPE" "DEL PEAK  9(6P24.1) WILD-TYPE" 
                   TCGA-DU-6394                    TCGA-DU-6395 
"DEL PEAK  9(6P24.1) WILD-TYPE" "DEL PEAK  9(6P24.1) WILD-TYPE" 
                   TCGA-DU-6396                    TCGA-DU-6397 
"DEL PEAK  9(6P24.1) WILD-TYPE" "DEL PEAK  9(6P24.1) WILD-TYPE" 
                   TCGA-DU-6399                    TCGA-DU-6400 
"DEL PEAK  9(6P24.1) WILD-TYPE"   "DEL PEAK  9(6P24.1) MUTATED" 
                   TCGA-DU-6401                    TCGA-DU-6402 
"DEL PEAK  9(6P24.1) WILD-TYPE"   "DEL PEAK  9(6P24.1) MUTATED" 
                   TCGA-DU-6403                    TCGA-DU-6404 
"DEL PEAK  9(6P24.1) WILD-TYPE" "DEL PEAK  9(6P24.1) WILD-TYPE" 
                   TCGA-DU-6405                    TCGA-DU-6406 
"DEL PEAK  9(6P24.1) WILD-TYPE" "DEL PEAK  9(6P24.1) WILD-TYPE" 
                   TCGA-DU-6407                    TCGA-DU-6408 
  "DEL PEAK  9(6P24.1) MUTATED" "DEL PEAK  9(6P24.1) WILD-TYPE" 
                   TCGA-DU-6410                    TCGA-DU-6542 
"DEL PEAK  9(6P24.1) WILD-TYPE" "DEL PEAK  9(6P24.1) WILD-TYPE" 
                   TCGA-DU-7006                    TCGA-DU-7007 
"DEL PEAK  9(6P24.1) WILD-TYPE" "DEL PEAK  9(6P24.1) WILD-TYPE" 
                   TCGA-DU-7008                    TCGA-DU-7009 
"DEL PEAK  9(6P24.1) WILD-TYPE" "DEL PEAK  9(6P24.1) WILD-TYPE" 
                   TCGA-DU-7010                    TCGA-DU-7011 
"DEL PEAK  9(6P24.1) WILD-TYPE" "DEL PEAK  9(6P24.1) WILD-TYPE" 
                   TCGA-DU-7012                    TCGA-DU-7013 
"DEL PEAK  9(6P24.1) WILD-TYPE" "DEL PEAK  9(6P24.1) WILD-TYPE" 
                   TCGA-DU-7014                    TCGA-DU-7015 
"DEL PEAK  9(6P24.1) WILD-TYPE" "DEL PEAK  9(6P24.1) WILD-TYPE" 
                   TCGA-DU-7018                    TCGA-DU-7019 
"DEL PEAK  9(6P24.1) WILD-TYPE" "DEL PEAK  9(6P24.1) WILD-TYPE" 
                   TCGA-DU-7290                    TCGA-DU-7292 
"DEL PEAK  9(6P24.1) WILD-TYPE" "DEL PEAK  9(6P24.1) WILD-TYPE" 
                   TCGA-DU-7294                    TCGA-DU-7298 
"DEL PEAK  9(6P24.1) WILD-TYPE" "DEL PEAK  9(6P24.1) WILD-TYPE" 
                   TCGA-DU-7299                    TCGA-DU-7300 
"DEL PEAK  9(6P24.1) WILD-TYPE" "DEL PEAK  9(6P24.1) WILD-TYPE" 
                   TCGA-DU-7301                    TCGA-DU-7302 
"DEL PEAK  9(6P24.1) WILD-TYPE" "DEL PEAK  9(6P24.1) WILD-TYPE" 
                   TCGA-DU-7304                    TCGA-DU-7306 
"DEL PEAK  9(6P24.1) WILD-TYPE" "DEL PEAK  9(6P24.1) WILD-TYPE" 
                   TCGA-DU-7309                    TCGA-E1-5302 
"DEL PEAK  9(6P24.1) WILD-TYPE" "DEL PEAK  9(6P24.1) WILD-TYPE" 
                   TCGA-E1-5303                    TCGA-E1-5304 
"DEL PEAK  9(6P24.1) WILD-TYPE"   "DEL PEAK  9(6P24.1) MUTATED" 
                   TCGA-E1-5305                    TCGA-E1-5307 
"DEL PEAK  9(6P24.1) WILD-TYPE" "DEL PEAK  9(6P24.1) WILD-TYPE" 
                   TCGA-E1-5311                    TCGA-E1-5318 
"DEL PEAK  9(6P24.1) WILD-TYPE" "DEL PEAK  9(6P24.1) WILD-TYPE" 
                   TCGA-E1-5319                    TCGA-E1-5322 
"DEL PEAK  9(6P24.1) WILD-TYPE" "DEL PEAK  9(6P24.1) WILD-TYPE" 
                   TCGA-EZ-7264                    TCGA-FG-5962 
"DEL PEAK  9(6P24.1) WILD-TYPE" "DEL PEAK  9(6P24.1) WILD-TYPE" 
                   TCGA-FG-5963                    TCGA-FG-5964 
  "DEL PEAK  9(6P24.1) MUTATED" "DEL PEAK  9(6P24.1) WILD-TYPE" 
                   TCGA-FG-5965                    TCGA-FG-6688 
"DEL PEAK  9(6P24.1) WILD-TYPE" "DEL PEAK  9(6P24.1) WILD-TYPE" 
                   TCGA-FG-6689                    TCGA-FG-6690 
"DEL PEAK  9(6P24.1) WILD-TYPE"   "DEL PEAK  9(6P24.1) MUTATED" 
                   TCGA-FG-6691                    TCGA-FG-6692 
"DEL PEAK  9(6P24.1) WILD-TYPE" "DEL PEAK  9(6P24.1) WILD-TYPE" 
                   TCGA-FG-7634                    TCGA-FG-7636 
"DEL PEAK  9(6P24.1) WILD-TYPE"   "DEL PEAK  9(6P24.1) MUTATED" 
                   TCGA-FG-7638                    TCGA-FG-7643 
"DEL PEAK  9(6P24.1) WILD-TYPE" "DEL PEAK  9(6P24.1) WILD-TYPE" 
                   TCGA-FN-7833                    TCGA-HT-7467 
"DEL PEAK  9(6P24.1) WILD-TYPE" "DEL PEAK  9(6P24.1) WILD-TYPE" 
                   TCGA-HT-7468                    TCGA-HT-7470 
"DEL PEAK  9(6P24.1) WILD-TYPE" "DEL PEAK  9(6P24.1) WILD-TYPE" 
                   TCGA-HT-7472                    TCGA-HT-7473 
"DEL PEAK  9(6P24.1) WILD-TYPE" "DEL PEAK  9(6P24.1) WILD-TYPE" 
                   TCGA-HT-7474                    TCGA-HT-7475 
"DEL PEAK  9(6P24.1) WILD-TYPE" "DEL PEAK  9(6P24.1) WILD-TYPE" 
                   TCGA-HT-7476                    TCGA-HT-7478 
"DEL PEAK  9(6P24.1) WILD-TYPE" "DEL PEAK  9(6P24.1) WILD-TYPE" 
                   TCGA-HT-7479                    TCGA-HT-7480 
"DEL PEAK  9(6P24.1) WILD-TYPE" "DEL PEAK  9(6P24.1) WILD-TYPE" 
                   TCGA-HT-7481                    TCGA-HT-7482 
"DEL PEAK  9(6P24.1) WILD-TYPE" "DEL PEAK  9(6P24.1) WILD-TYPE" 
                   TCGA-HT-7483                    TCGA-HT-7485 
"DEL PEAK  9(6P24.1) WILD-TYPE" "DEL PEAK  9(6P24.1) WILD-TYPE" 
                   TCGA-HT-7601                    TCGA-HT-7602 
"DEL PEAK  9(6P24.1) WILD-TYPE" "DEL PEAK  9(6P24.1) WILD-TYPE" 
                   TCGA-HT-7603                    TCGA-HT-7604 
"DEL PEAK  9(6P24.1) WILD-TYPE"   "DEL PEAK  9(6P24.1) MUTATED" 
                   TCGA-HT-7605                    TCGA-HT-7606 
"DEL PEAK  9(6P24.1) WILD-TYPE" "DEL PEAK  9(6P24.1) WILD-TYPE" 
                   TCGA-HT-7607                    TCGA-HT-7608 
"DEL PEAK  9(6P24.1) WILD-TYPE" "DEL PEAK  9(6P24.1) WILD-TYPE" 
                   TCGA-HT-7609                    TCGA-HT-7610 
"DEL PEAK  9(6P24.1) WILD-TYPE" "DEL PEAK  9(6P24.1) WILD-TYPE" 
                   TCGA-HW-7486                    TCGA-HW-7487 
"DEL PEAK  9(6P24.1) WILD-TYPE" "DEL PEAK  9(6P24.1) WILD-TYPE" 
                   TCGA-HW-7489                    TCGA-HW-7490 
"DEL PEAK  9(6P24.1) WILD-TYPE" "DEL PEAK  9(6P24.1) WILD-TYPE" 
                   TCGA-HW-7491                    TCGA-HW-7493 
"DEL PEAK  9(6P24.1) WILD-TYPE"   "DEL PEAK  9(6P24.1) MUTATED" 
                   TCGA-HW-7495                    TCGA-IK-7675 
"DEL PEAK  9(6P24.1) WILD-TYPE"   "DEL PEAK  9(6P24.1) MUTATED" 
                   TCGA-IK-8125 
"DEL PEAK  9(6P24.1) WILD-TYPE" 
                   TCGA-CS-4938                    TCGA-CS-4941 
"DEL PEAK  9(6P24.1) WILD-TYPE" "DEL PEAK  9(6P24.1) WILD-TYPE" 
                   TCGA-CS-4942                    TCGA-CS-4943 
"DEL PEAK  9(6P24.1) WILD-TYPE" "DEL PEAK  9(6P24.1) WILD-TYPE" 
                   TCGA-CS-4944                    TCGA-CS-5390 
"DEL PEAK  9(6P24.1) WILD-TYPE" "DEL PEAK  9(6P24.1) WILD-TYPE" 
                   TCGA-CS-5393                    TCGA-CS-5394 
"DEL PEAK  9(6P24.1) WILD-TYPE" "DEL PEAK  9(6P24.1) WILD-TYPE" 
                   TCGA-CS-5395                    TCGA-CS-5396 
"DEL PEAK  9(6P24.1) WILD-TYPE" "DEL PEAK  9(6P24.1) WILD-TYPE" 
                   TCGA-CS-5397                    TCGA-CS-6186 
  "DEL PEAK  9(6P24.1) MUTATED" "DEL PEAK  9(6P24.1) WILD-TYPE" 
                   TCGA-CS-6188                    TCGA-CS-6290 
  "DEL PEAK  9(6P24.1) MUTATED" "DEL PEAK  9(6P24.1) WILD-TYPE" 
                   TCGA-CS-6665                    TCGA-CS-6666 
"DEL PEAK  9(6P24.1) WILD-TYPE"   "DEL PEAK  9(6P24.1) MUTATED" 
                   TCGA-CS-6667                    TCGA-CS-6668 
"DEL PEAK  9(6P24.1) WILD-TYPE" "DEL PEAK  9(6P24.1) WILD-TYPE" 
                   TCGA-CS-6669                    TCGA-CS-6670 
"DEL PEAK  9(6P24.1) WILD-TYPE" "DEL PEAK  9(6P24.1) WILD-TYPE" 
                   TCGA-DB-5270                    TCGA-DB-5273 
"DEL PEAK  9(6P24.1) WILD-TYPE" "DEL PEAK  9(6P24.1) WILD-TYPE" 
                   TCGA-DB-5274                    TCGA-DB-5275 
"DEL PEAK  9(6P24.1) WILD-TYPE" "DEL PEAK  9(6P24.1) WILD-TYPE" 
                   TCGA-DB-5276                    TCGA-DB-5277 
"DEL PEAK  9(6P24.1) WILD-TYPE"   "DEL PEAK  9(6P24.1) MUTATED" 
                   TCGA-DB-5278                    TCGA-DB-5279 
"DEL PEAK  9(6P24.1) WILD-TYPE" "DEL PEAK  9(6P24.1) WILD-TYPE" 
                   TCGA-DB-5280                    TCGA-DB-5281 
"DEL PEAK  9(6P24.1) WILD-TYPE" "DEL PEAK  9(6P24.1) WILD-TYPE" 
                   TCGA-DH-5140                    TCGA-DH-5141 
"DEL PEAK  9(6P24.1) WILD-TYPE" "DEL PEAK  9(6P24.1) WILD-TYPE" 
                   TCGA-DH-5142                    TCGA-DH-5143 
"DEL PEAK  9(6P24.1) WILD-TYPE" "DEL PEAK  9(6P24.1) WILD-TYPE" 
                   TCGA-DH-5144                    TCGA-DU-5847 
"DEL PEAK  9(6P24.1) WILD-TYPE" "DEL PEAK  9(6P24.1) WILD-TYPE" 
                   TCGA-DU-5849                    TCGA-DU-5851 
"DEL PEAK  9(6P24.1) WILD-TYPE" "DEL PEAK  9(6P24.1) WILD-TYPE" 
                   TCGA-DU-5852                    TCGA-DU-5853 
"DEL PEAK  9(6P24.1) WILD-TYPE" "DEL PEAK  9(6P24.1) WILD-TYPE" 
                   TCGA-DU-5854                    TCGA-DU-5855 
"DEL PEAK  9(6P24.1) WILD-TYPE" "DEL PEAK  9(6P24.1) WILD-TYPE" 
                   TCGA-DU-5870                    TCGA-DU-5871 
"DEL PEAK  9(6P24.1) WILD-TYPE" "DEL PEAK  9(6P24.1) WILD-TYPE" 
                   TCGA-DU-5872                    TCGA-DU-5874 
"DEL PEAK  9(6P24.1) WILD-TYPE" "DEL PEAK  9(6P24.1) WILD-TYPE" 
                   TCGA-DU-6392                    TCGA-DU-6393 
"DEL PEAK  9(6P24.1) WILD-TYPE" "DEL PEAK  9(6P24.1) WILD-TYPE" 
                   TCGA-DU-6394                    TCGA-DU-6395 
"DEL PEAK  9(6P24.1) WILD-TYPE" "DEL PEAK  9(6P24.1) WILD-TYPE" 
                   TCGA-DU-6396                    TCGA-DU-6397 
"DEL PEAK  9(6P24.1) WILD-TYPE" "DEL PEAK  9(6P24.1) WILD-TYPE" 
                   TCGA-DU-6399                    TCGA-DU-6400 
"DEL PEAK  9(6P24.1) WILD-TYPE"   "DEL PEAK  9(6P24.1) MUTATED" 
                   TCGA-DU-6401                    TCGA-DU-6402 
"DEL PEAK  9(6P24.1) WILD-TYPE"   "DEL PEAK  9(6P24.1) MUTATED" 
                   TCGA-DU-6403                    TCGA-DU-6404 
"DEL PEAK  9(6P24.1) WILD-TYPE" "DEL PEAK  9(6P24.1) WILD-TYPE" 
                   TCGA-DU-6405                    TCGA-DU-6406 
"DEL PEAK  9(6P24.1) WILD-TYPE" "DEL PEAK  9(6P24.1) WILD-TYPE" 
                   TCGA-DU-6407                    TCGA-DU-6408 
  "DEL PEAK  9(6P24.1) MUTATED" "DEL PEAK  9(6P24.1) WILD-TYPE" 
                   TCGA-DU-6410                    TCGA-DU-6542 
"DEL PEAK  9(6P24.1) WILD-TYPE" "DEL PEAK  9(6P24.1) WILD-TYPE" 
                   TCGA-DU-7006                    TCGA-DU-7007 
"DEL PEAK  9(6P24.1) WILD-TYPE" "DEL PEAK  9(6P24.1) WILD-TYPE" 
                   TCGA-DU-7008                    TCGA-DU-7009 
"DEL PEAK  9(6P24.1) WILD-TYPE" "DEL PEAK  9(6P24.1) WILD-TYPE" 
                   TCGA-DU-7010                    TCGA-DU-7011 
"DEL PEAK  9(6P24.1) WILD-TYPE" "DEL PEAK  9(6P24.1) WILD-TYPE" 
                   TCGA-DU-7012                    TCGA-DU-7013 
"DEL PEAK  9(6P24.1) WILD-TYPE" "DEL PEAK  9(6P24.1) WILD-TYPE" 
                   TCGA-DU-7014                    TCGA-DU-7015 
"DEL PEAK  9(6P24.1) WILD-TYPE" "DEL PEAK  9(6P24.1) WILD-TYPE" 
                   TCGA-DU-7018                    TCGA-DU-7019 
"DEL PEAK  9(6P24.1) WILD-TYPE" "DEL PEAK  9(6P24.1) WILD-TYPE" 
                   TCGA-DU-7290                    TCGA-DU-7292 
"DEL PEAK  9(6P24.1) WILD-TYPE" "DEL PEAK  9(6P24.1) WILD-TYPE" 
                   TCGA-DU-7294                    TCGA-DU-7298 
"DEL PEAK  9(6P24.1) WILD-TYPE" "DEL PEAK  9(6P24.1) WILD-TYPE" 
                   TCGA-DU-7299                    TCGA-DU-7300 
"DEL PEAK  9(6P24.1) WILD-TYPE" "DEL PEAK  9(6P24.1) WILD-TYPE" 
                   TCGA-DU-7301                    TCGA-DU-7302 
"DEL PEAK  9(6P24.1) WILD-TYPE" "DEL PEAK  9(6P24.1) WILD-TYPE" 
                   TCGA-DU-7304                    TCGA-DU-7306 
"DEL PEAK  9(6P24.1) WILD-TYPE" "DEL PEAK  9(6P24.1) WILD-TYPE" 
                   TCGA-DU-7309                    TCGA-E1-5302 
"DEL PEAK  9(6P24.1) WILD-TYPE" "DEL PEAK  9(6P24.1) WILD-TYPE" 
                   TCGA-E1-5303                    TCGA-E1-5304 
"DEL PEAK  9(6P24.1) WILD-TYPE"   "DEL PEAK  9(6P24.1) MUTATED" 
                   TCGA-E1-5305                    TCGA-E1-5307 
"DEL PEAK  9(6P24.1) WILD-TYPE" "DEL PEAK  9(6P24.1) WILD-TYPE" 
                   TCGA-E1-5311                    TCGA-E1-5318 
"DEL PEAK  9(6P24.1) WILD-TYPE" "DEL PEAK  9(6P24.1) WILD-TYPE" 
                   TCGA-E1-5319                    TCGA-E1-5322 
"DEL PEAK  9(6P24.1) WILD-TYPE" "DEL PEAK  9(6P24.1) WILD-TYPE" 
                   TCGA-EZ-7264                    TCGA-FG-5962 
"DEL PEAK  9(6P24.1) WILD-TYPE" "DEL PEAK  9(6P24.1) WILD-TYPE" 
                   TCGA-FG-5963                    TCGA-FG-5964 
  "DEL PEAK  9(6P24.1) MUTATED" "DEL PEAK  9(6P24.1) WILD-TYPE" 
                   TCGA-FG-5965                    TCGA-FG-6688 
"DEL PEAK  9(6P24.1) WILD-TYPE" "DEL PEAK  9(6P24.1) WILD-TYPE" 
                   TCGA-FG-6689                    TCGA-FG-6690 
"DEL PEAK  9(6P24.1) WILD-TYPE"   "DEL PEAK  9(6P24.1) MUTATED" 
                   TCGA-FG-6691                    TCGA-FG-6692 
"DEL PEAK  9(6P24.1) WILD-TYPE" "DEL PEAK  9(6P24.1) WILD-TYPE" 
                   TCGA-FG-7634                    TCGA-FG-7636 
"DEL PEAK  9(6P24.1) WILD-TYPE"   "DEL PEAK  9(6P24.1) MUTATED" 
                   TCGA-FG-7638                    TCGA-FG-7643 
"DEL PEAK  9(6P24.1) WILD-TYPE" "DEL PEAK  9(6P24.1) WILD-TYPE" 
                   TCGA-FN-7833                    TCGA-HT-7467 
"DEL PEAK  9(6P24.1) WILD-TYPE" "DEL PEAK  9(6P24.1) WILD-TYPE" 
                   TCGA-HT-7468                    TCGA-HT-7470 
"DEL PEAK  9(6P24.1) WILD-TYPE" "DEL PEAK  9(6P24.1) WILD-TYPE" 
                   TCGA-HT-7472                    TCGA-HT-7473 
"DEL PEAK  9(6P24.1) WILD-TYPE" "DEL PEAK  9(6P24.1) WILD-TYPE" 
                   TCGA-HT-7474                    TCGA-HT-7475 
"DEL PEAK  9(6P24.1) WILD-TYPE" "DEL PEAK  9(6P24.1) WILD-TYPE" 
                   TCGA-HT-7476                    TCGA-HT-7478 
"DEL PEAK  9(6P24.1) WILD-TYPE" "DEL PEAK  9(6P24.1) WILD-TYPE" 
                   TCGA-HT-7479                    TCGA-HT-7480 
"DEL PEAK  9(6P24.1) WILD-TYPE" "DEL PEAK  9(6P24.1) WILD-TYPE" 
                   TCGA-HT-7481                    TCGA-HT-7482 
"DEL PEAK  9(6P24.1) WILD-TYPE" "DEL PEAK  9(6P24.1) WILD-TYPE" 
                   TCGA-HT-7483                    TCGA-HT-7485 
"DEL PEAK  9(6P24.1) WILD-TYPE" "DEL PEAK  9(6P24.1) WILD-TYPE" 
                   TCGA-HT-7601                    TCGA-HT-7602 
"DEL PEAK  9(6P24.1) WILD-TYPE" "DEL PEAK  9(6P24.1) WILD-TYPE" 
                   TCGA-HT-7603                    TCGA-HT-7604 
"DEL PEAK  9(6P24.1) WILD-TYPE"   "DEL PEAK  9(6P24.1) MUTATED" 
                   TCGA-HT-7605                    TCGA-HT-7606 
"DEL PEAK  9(6P24.1) WILD-TYPE" "DEL PEAK  9(6P24.1) WILD-TYPE" 
                   TCGA-HT-7607                    TCGA-HT-7608 
"DEL PEAK  9(6P24.1) WILD-TYPE" "DEL PEAK  9(6P24.1) WILD-TYPE" 
                   TCGA-HT-7609                    TCGA-HT-7610 
"DEL PEAK  9(6P24.1) WILD-TYPE" "DEL PEAK  9(6P24.1) WILD-TYPE" 
                   TCGA-HW-7486                    TCGA-HW-7487 
"DEL PEAK  9(6P24.1) WILD-TYPE" "DEL PEAK  9(6P24.1) WILD-TYPE" 
                   TCGA-HW-7489                    TCGA-HW-7490 
"DEL PEAK  9(6P24.1) WILD-TYPE" "DEL PEAK  9(6P24.1) WILD-TYPE" 
                   TCGA-HW-7491                    TCGA-HW-7493 
"DEL PEAK  9(6P24.1) WILD-TYPE"   "DEL PEAK  9(6P24.1) MUTATED" 
                   TCGA-HW-7495                    TCGA-IK-7675 
"DEL PEAK  9(6P24.1) WILD-TYPE"   "DEL PEAK  9(6P24.1) MUTATED" 
                   TCGA-IK-8125 
"DEL PEAK  9(6P24.1) WILD-TYPE" 
[1] "hr=" "1.8"
D23V2, continuous
D23V3, binary
[1] "tbl2"
                               cls
clus                            [,1] [,2]
  DEL PEAK  9(6P24.1) MUTATED      4   10
  DEL PEAK  9(6P24.1) WILD-TYPE   58   73
        clus
vv       DEL PEAK  9(6P24.1) MUTATED DEL PEAK  9(6P24.1) WILD-TYPE
  FEMALE                           4                            58
  MALE                            10                            73
D23V4, continuous
D23V5, multiclass
                   clus
vv                  DEL PEAK  9(6P24.1) MUTATED DEL PEAK  9(6P24.1) WILD-TYPE
  ASTROCYTOMA                                10                            40
  OLIGOASTROCYTOMA                            0                            36
  OLIGODENDROGLIOMA                           4                            54
D23V6, binary
[1] "tbl2"
                               cls
clus                            [,1] [,2]
  DEL PEAK  9(6P24.1) MUTATED      4   10
  DEL PEAK  9(6P24.1) WILD-TYPE   55   76
     clus
vv    DEL PEAK  9(6P24.1) MUTATED DEL PEAK  9(6P24.1) WILD-TYPE
  NO                           10                            76
  YES                           4                            55
D23V7, binary
[1] "tbl2"
                               cls
clus                            [,1] [,2]
  DEL PEAK  9(6P24.1) MUTATED      9    5
  DEL PEAK  9(6P24.1) WILD-TYPE   65   66
     clus
vv    DEL PEAK  9(6P24.1) MUTATED DEL PEAK  9(6P24.1) WILD-TYPE
  NO                            5                            66
  YES                           9                            65

Clustering(24) Variable = Del Peak 10(6q25.1) mutation analysis
D24V1, survival
                   TCGA-CS-4938                    TCGA-CS-4941 
"DEL PEAK 10(6Q25.1) WILD-TYPE" "DEL PEAK 10(6Q25.1) WILD-TYPE" 
                   TCGA-CS-4942                    TCGA-CS-4943 
"DEL PEAK 10(6Q25.1) WILD-TYPE" "DEL PEAK 10(6Q25.1) WILD-TYPE" 
                   TCGA-CS-4944                    TCGA-CS-5390 
  "DEL PEAK 10(6Q25.1) MUTATED" "DEL PEAK 10(6Q25.1) WILD-TYPE" 
                   TCGA-CS-5393                    TCGA-CS-5394 
"DEL PEAK 10(6Q25.1) WILD-TYPE" "DEL PEAK 10(6Q25.1) WILD-TYPE" 
                   TCGA-CS-5395                    TCGA-CS-5396 
"DEL PEAK 10(6Q25.1) WILD-TYPE" "DEL PEAK 10(6Q25.1) WILD-TYPE" 
                   TCGA-CS-5397                    TCGA-CS-6186 
  "DEL PEAK 10(6Q25.1) MUTATED" "DEL PEAK 10(6Q25.1) WILD-TYPE" 
                   TCGA-CS-6188                    TCGA-CS-6290 
"DEL PEAK 10(6Q25.1) WILD-TYPE" "DEL PEAK 10(6Q25.1) WILD-TYPE" 
                   TCGA-CS-6665                    TCGA-CS-6666 
"DEL PEAK 10(6Q25.1) WILD-TYPE"   "DEL PEAK 10(6Q25.1) MUTATED" 
                   TCGA-CS-6667                    TCGA-CS-6668 
"DEL PEAK 10(6Q25.1) WILD-TYPE" "DEL PEAK 10(6Q25.1) WILD-TYPE" 
                   TCGA-CS-6669                    TCGA-CS-6670 
"DEL PEAK 10(6Q25.1) WILD-TYPE" "DEL PEAK 10(6Q25.1) WILD-TYPE" 
                   TCGA-DB-5270                    TCGA-DB-5273 
"DEL PEAK 10(6Q25.1) WILD-TYPE" "DEL PEAK 10(6Q25.1) WILD-TYPE" 
                   TCGA-DB-5274                    TCGA-DB-5275 
"DEL PEAK 10(6Q25.1) WILD-TYPE" "DEL PEAK 10(6Q25.1) WILD-TYPE" 
                   TCGA-DB-5276                    TCGA-DB-5277 
"DEL PEAK 10(6Q25.1) WILD-TYPE" "DEL PEAK 10(6Q25.1) WILD-TYPE" 
                   TCGA-DB-5278                    TCGA-DB-5279 
"DEL PEAK 10(6Q25.1) WILD-TYPE" "DEL PEAK 10(6Q25.1) WILD-TYPE" 
                   TCGA-DB-5280                    TCGA-DB-5281 
  "DEL PEAK 10(6Q25.1) MUTATED" "DEL PEAK 10(6Q25.1) WILD-TYPE" 
                   TCGA-DH-5140                    TCGA-DH-5141 
"DEL PEAK 10(6Q25.1) WILD-TYPE" "DEL PEAK 10(6Q25.1) WILD-TYPE" 
                   TCGA-DH-5142                    TCGA-DH-5143 
"DEL PEAK 10(6Q25.1) WILD-TYPE" "DEL PEAK 10(6Q25.1) WILD-TYPE" 
                   TCGA-DH-5144                    TCGA-DU-5847 
"DEL PEAK 10(6Q25.1) WILD-TYPE"   "DEL PEAK 10(6Q25.1) MUTATED" 
                   TCGA-DU-5849                    TCGA-DU-5851 
"DEL PEAK 10(6Q25.1) WILD-TYPE" "DEL PEAK 10(6Q25.1) WILD-TYPE" 
                   TCGA-DU-5852                    TCGA-DU-5853 
"DEL PEAK 10(6Q25.1) WILD-TYPE" "DEL PEAK 10(6Q25.1) WILD-TYPE" 
                   TCGA-DU-5854                    TCGA-DU-5855 
"DEL PEAK 10(6Q25.1) WILD-TYPE"   "DEL PEAK 10(6Q25.1) MUTATED" 
                   TCGA-DU-5870                    TCGA-DU-5871 
"DEL PEAK 10(6Q25.1) WILD-TYPE" "DEL PEAK 10(6Q25.1) WILD-TYPE" 
                   TCGA-DU-5872                    TCGA-DU-5874 
  "DEL PEAK 10(6Q25.1) MUTATED" "DEL PEAK 10(6Q25.1) WILD-TYPE" 
                   TCGA-DU-6392                    TCGA-DU-6393 
"DEL PEAK 10(6Q25.1) WILD-TYPE" "DEL PEAK 10(6Q25.1) WILD-TYPE" 
                   TCGA-DU-6394                    TCGA-DU-6395 
"DEL PEAK 10(6Q25.1) WILD-TYPE" "DEL PEAK 10(6Q25.1) WILD-TYPE" 
                   TCGA-DU-6396                    TCGA-DU-6397 
"DEL PEAK 10(6Q25.1) WILD-TYPE" "DEL PEAK 10(6Q25.1) WILD-TYPE" 
                   TCGA-DU-6399                    TCGA-DU-6400 
"DEL PEAK 10(6Q25.1) WILD-TYPE"   "DEL PEAK 10(6Q25.1) MUTATED" 
                   TCGA-DU-6401                    TCGA-DU-6402 
"DEL PEAK 10(6Q25.1) WILD-TYPE" "DEL PEAK 10(6Q25.1) WILD-TYPE" 
                   TCGA-DU-6403                    TCGA-DU-6404 
"DEL PEAK 10(6Q25.1) WILD-TYPE" "DEL PEAK 10(6Q25.1) WILD-TYPE" 
                   TCGA-DU-6405                    TCGA-DU-6406 
  "DEL PEAK 10(6Q25.1) MUTATED" "DEL PEAK 10(6Q25.1) WILD-TYPE" 
                   TCGA-DU-6407                    TCGA-DU-6408 
"DEL PEAK 10(6Q25.1) WILD-TYPE" "DEL PEAK 10(6Q25.1) WILD-TYPE" 
                   TCGA-DU-6410                    TCGA-DU-6542 
"DEL PEAK 10(6Q25.1) WILD-TYPE"   "DEL PEAK 10(6Q25.1) MUTATED" 
                   TCGA-DU-7006                    TCGA-DU-7007 
  "DEL PEAK 10(6Q25.1) MUTATED" "DEL PEAK 10(6Q25.1) WILD-TYPE" 
                   TCGA-DU-7008                    TCGA-DU-7009 
"DEL PEAK 10(6Q25.1) WILD-TYPE" "DEL PEAK 10(6Q25.1) WILD-TYPE" 
                   TCGA-DU-7010                    TCGA-DU-7011 
"DEL PEAK 10(6Q25.1) WILD-TYPE" "DEL PEAK 10(6Q25.1) WILD-TYPE" 
                   TCGA-DU-7012                    TCGA-DU-7013 
  "DEL PEAK 10(6Q25.1) MUTATED" "DEL PEAK 10(6Q25.1) WILD-TYPE" 
                   TCGA-DU-7014                    TCGA-DU-7015 
  "DEL PEAK 10(6Q25.1) MUTATED" "DEL PEAK 10(6Q25.1) WILD-TYPE" 
                   TCGA-DU-7018                    TCGA-DU-7019 
"DEL PEAK 10(6Q25.1) WILD-TYPE" "DEL PEAK 10(6Q25.1) WILD-TYPE" 
                   TCGA-DU-7290                    TCGA-DU-7292 
"DEL PEAK 10(6Q25.1) WILD-TYPE" "DEL PEAK 10(6Q25.1) WILD-TYPE" 
                   TCGA-DU-7294                    TCGA-DU-7298 
"DEL PEAK 10(6Q25.1) WILD-TYPE"   "DEL PEAK 10(6Q25.1) MUTATED" 
                   TCGA-DU-7299                    TCGA-DU-7300 
"DEL PEAK 10(6Q25.1) WILD-TYPE" "DEL PEAK 10(6Q25.1) WILD-TYPE" 
                   TCGA-DU-7301                    TCGA-DU-7302 
"DEL PEAK 10(6Q25.1) WILD-TYPE" "DEL PEAK 10(6Q25.1) WILD-TYPE" 
                   TCGA-DU-7304                    TCGA-DU-7306 
"DEL PEAK 10(6Q25.1) WILD-TYPE" "DEL PEAK 10(6Q25.1) WILD-TYPE" 
                   TCGA-DU-7309                    TCGA-E1-5302 
"DEL PEAK 10(6Q25.1) WILD-TYPE" "DEL PEAK 10(6Q25.1) WILD-TYPE" 
                   TCGA-E1-5303                    TCGA-E1-5304 
"DEL PEAK 10(6Q25.1) WILD-TYPE" "DEL PEAK 10(6Q25.1) WILD-TYPE" 
                   TCGA-E1-5305                    TCGA-E1-5307 
  "DEL PEAK 10(6Q25.1) MUTATED"   "DEL PEAK 10(6Q25.1) MUTATED" 
                   TCGA-E1-5311                    TCGA-E1-5318 
"DEL PEAK 10(6Q25.1) WILD-TYPE" "DEL PEAK 10(6Q25.1) WILD-TYPE" 
                   TCGA-E1-5319                    TCGA-E1-5322 
"DEL PEAK 10(6Q25.1) WILD-TYPE"   "DEL PEAK 10(6Q25.1) MUTATED" 
                   TCGA-EZ-7264                    TCGA-FG-5962 
"DEL PEAK 10(6Q25.1) WILD-TYPE" "DEL PEAK 10(6Q25.1) WILD-TYPE" 
                   TCGA-FG-5963                    TCGA-FG-5964 
  "DEL PEAK 10(6Q25.1) MUTATED" "DEL PEAK 10(6Q25.1) WILD-TYPE" 
                   TCGA-FG-5965                    TCGA-FG-6688 
"DEL PEAK 10(6Q25.1) WILD-TYPE" "DEL PEAK 10(6Q25.1) WILD-TYPE" 
                   TCGA-FG-6689                    TCGA-FG-6690 
"DEL PEAK 10(6Q25.1) WILD-TYPE" "DEL PEAK 10(6Q25.1) WILD-TYPE" 
                   TCGA-FG-6691                    TCGA-FG-6692 
"DEL PEAK 10(6Q25.1) WILD-TYPE" "DEL PEAK 10(6Q25.1) WILD-TYPE" 
                   TCGA-FG-7634                    TCGA-FG-7636 
"DEL PEAK 10(6Q25.1) WILD-TYPE"   "DEL PEAK 10(6Q25.1) MUTATED" 
                   TCGA-FG-7638                    TCGA-FG-7643 
"DEL PEAK 10(6Q25.1) WILD-TYPE" "DEL PEAK 10(6Q25.1) WILD-TYPE" 
                   TCGA-FN-7833                    TCGA-HT-7467 
  "DEL PEAK 10(6Q25.1) MUTATED" "DEL PEAK 10(6Q25.1) WILD-TYPE" 
                   TCGA-HT-7468                    TCGA-HT-7470 
"DEL PEAK 10(6Q25.1) WILD-TYPE" "DEL PEAK 10(6Q25.1) WILD-TYPE" 
                   TCGA-HT-7472                    TCGA-HT-7473 
  "DEL PEAK 10(6Q25.1) MUTATED" "DEL PEAK 10(6Q25.1) WILD-TYPE" 
                   TCGA-HT-7474                    TCGA-HT-7475 
"DEL PEAK 10(6Q25.1) WILD-TYPE"   "DEL PEAK 10(6Q25.1) MUTATED" 
                   TCGA-HT-7476                    TCGA-HT-7478 
"DEL PEAK 10(6Q25.1) WILD-TYPE" "DEL PEAK 10(6Q25.1) WILD-TYPE" 
                   TCGA-HT-7479                    TCGA-HT-7480 
"DEL PEAK 10(6Q25.1) WILD-TYPE" "DEL PEAK 10(6Q25.1) WILD-TYPE" 
                   TCGA-HT-7481                    TCGA-HT-7482 
"DEL PEAK 10(6Q25.1) WILD-TYPE" "DEL PEAK 10(6Q25.1) WILD-TYPE" 
                   TCGA-HT-7483                    TCGA-HT-7485 
"DEL PEAK 10(6Q25.1) WILD-TYPE" "DEL PEAK 10(6Q25.1) WILD-TYPE" 
                   TCGA-HT-7601                    TCGA-HT-7602 
"DEL PEAK 10(6Q25.1) WILD-TYPE" "DEL PEAK 10(6Q25.1) WILD-TYPE" 
                   TCGA-HT-7603                    TCGA-HT-7604 
"DEL PEAK 10(6Q25.1) WILD-TYPE" "DEL PEAK 10(6Q25.1) WILD-TYPE" 
                   TCGA-HT-7605                    TCGA-HT-7606 
"DEL PEAK 10(6Q25.1) WILD-TYPE"   "DEL PEAK 10(6Q25.1) MUTATED" 
                   TCGA-HT-7607                    TCGA-HT-7608 
"DEL PEAK 10(6Q25.1) WILD-TYPE" "DEL PEAK 10(6Q25.1) WILD-TYPE" 
                   TCGA-HT-7609                    TCGA-HT-7610 
"DEL PEAK 10(6Q25.1) WILD-TYPE" "DEL PEAK 10(6Q25.1) WILD-TYPE" 
                   TCGA-HW-7486                    TCGA-HW-7487 
"DEL PEAK 10(6Q25.1) WILD-TYPE" "DEL PEAK 10(6Q25.1) WILD-TYPE" 
                   TCGA-HW-7489                    TCGA-HW-7490 
"DEL PEAK 10(6Q25.1) WILD-TYPE" "DEL PEAK 10(6Q25.1) WILD-TYPE" 
                   TCGA-HW-7491                    TCGA-HW-7493 
"DEL PEAK 10(6Q25.1) WILD-TYPE" "DEL PEAK 10(6Q25.1) WILD-TYPE" 
                   TCGA-HW-7495                    TCGA-IK-7675 
"DEL PEAK 10(6Q25.1) WILD-TYPE" "DEL PEAK 10(6Q25.1) WILD-TYPE" 
                   TCGA-IK-8125 
"DEL PEAK 10(6Q25.1) WILD-TYPE" 
                   TCGA-CS-4938                    TCGA-CS-4941 
"DEL PEAK 10(6Q25.1) WILD-TYPE" "DEL PEAK 10(6Q25.1) WILD-TYPE" 
                   TCGA-CS-4942                    TCGA-CS-4943 
"DEL PEAK 10(6Q25.1) WILD-TYPE" "DEL PEAK 10(6Q25.1) WILD-TYPE" 
                   TCGA-CS-4944                    TCGA-CS-5390 
  "DEL PEAK 10(6Q25.1) MUTATED" "DEL PEAK 10(6Q25.1) WILD-TYPE" 
                   TCGA-CS-5393                    TCGA-CS-5394 
"DEL PEAK 10(6Q25.1) WILD-TYPE" "DEL PEAK 10(6Q25.1) WILD-TYPE" 
                   TCGA-CS-5395                    TCGA-CS-5396 
"DEL PEAK 10(6Q25.1) WILD-TYPE" "DEL PEAK 10(6Q25.1) WILD-TYPE" 
                   TCGA-CS-5397                    TCGA-CS-6186 
  "DEL PEAK 10(6Q25.1) MUTATED" "DEL PEAK 10(6Q25.1) WILD-TYPE" 
                   TCGA-CS-6188                    TCGA-CS-6290 
"DEL PEAK 10(6Q25.1) WILD-TYPE" "DEL PEAK 10(6Q25.1) WILD-TYPE" 
                   TCGA-CS-6665                    TCGA-CS-6666 
"DEL PEAK 10(6Q25.1) WILD-TYPE"   "DEL PEAK 10(6Q25.1) MUTATED" 
                   TCGA-CS-6667                    TCGA-CS-6668 
"DEL PEAK 10(6Q25.1) WILD-TYPE" "DEL PEAK 10(6Q25.1) WILD-TYPE" 
                   TCGA-CS-6669                    TCGA-CS-6670 
"DEL PEAK 10(6Q25.1) WILD-TYPE" "DEL PEAK 10(6Q25.1) WILD-TYPE" 
                   TCGA-DB-5270                    TCGA-DB-5273 
"DEL PEAK 10(6Q25.1) WILD-TYPE" "DEL PEAK 10(6Q25.1) WILD-TYPE" 
                   TCGA-DB-5274                    TCGA-DB-5275 
"DEL PEAK 10(6Q25.1) WILD-TYPE" "DEL PEAK 10(6Q25.1) WILD-TYPE" 
                   TCGA-DB-5276                    TCGA-DB-5277 
"DEL PEAK 10(6Q25.1) WILD-TYPE" "DEL PEAK 10(6Q25.1) WILD-TYPE" 
                   TCGA-DB-5278                    TCGA-DB-5279 
"DEL PEAK 10(6Q25.1) WILD-TYPE" "DEL PEAK 10(6Q25.1) WILD-TYPE" 
                   TCGA-DB-5280                    TCGA-DB-5281 
  "DEL PEAK 10(6Q25.1) MUTATED" "DEL PEAK 10(6Q25.1) WILD-TYPE" 
                   TCGA-DH-5140                    TCGA-DH-5141 
"DEL PEAK 10(6Q25.1) WILD-TYPE" "DEL PEAK 10(6Q25.1) WILD-TYPE" 
                   TCGA-DH-5142                    TCGA-DH-5143 
"DEL PEAK 10(6Q25.1) WILD-TYPE" "DEL PEAK 10(6Q25.1) WILD-TYPE" 
                   TCGA-DH-5144                    TCGA-DU-5847 
"DEL PEAK 10(6Q25.1) WILD-TYPE"   "DEL PEAK 10(6Q25.1) MUTATED" 
                   TCGA-DU-5849                    TCGA-DU-5851 
"DEL PEAK 10(6Q25.1) WILD-TYPE" "DEL PEAK 10(6Q25.1) WILD-TYPE" 
                   TCGA-DU-5852                    TCGA-DU-5853 
"DEL PEAK 10(6Q25.1) WILD-TYPE" "DEL PEAK 10(6Q25.1) WILD-TYPE" 
                   TCGA-DU-5854                    TCGA-DU-5855 
"DEL PEAK 10(6Q25.1) WILD-TYPE"   "DEL PEAK 10(6Q25.1) MUTATED" 
                   TCGA-DU-5870                    TCGA-DU-5871 
"DEL PEAK 10(6Q25.1) WILD-TYPE" "DEL PEAK 10(6Q25.1) WILD-TYPE" 
                   TCGA-DU-5872                    TCGA-DU-5874 
  "DEL PEAK 10(6Q25.1) MUTATED" "DEL PEAK 10(6Q25.1) WILD-TYPE" 
                   TCGA-DU-6392                    TCGA-DU-6393 
"DEL PEAK 10(6Q25.1) WILD-TYPE" "DEL PEAK 10(6Q25.1) WILD-TYPE" 
                   TCGA-DU-6394                    TCGA-DU-6395 
"DEL PEAK 10(6Q25.1) WILD-TYPE" "DEL PEAK 10(6Q25.1) WILD-TYPE" 
                   TCGA-DU-6396                    TCGA-DU-6397 
"DEL PEAK 10(6Q25.1) WILD-TYPE" "DEL PEAK 10(6Q25.1) WILD-TYPE" 
                   TCGA-DU-6399                    TCGA-DU-6400 
"DEL PEAK 10(6Q25.1) WILD-TYPE"   "DEL PEAK 10(6Q25.1) MUTATED" 
                   TCGA-DU-6401                    TCGA-DU-6402 
"DEL PEAK 10(6Q25.1) WILD-TYPE" "DEL PEAK 10(6Q25.1) WILD-TYPE" 
                   TCGA-DU-6403                    TCGA-DU-6404 
"DEL PEAK 10(6Q25.1) WILD-TYPE" "DEL PEAK 10(6Q25.1) WILD-TYPE" 
                   TCGA-DU-6405                    TCGA-DU-6406 
  "DEL PEAK 10(6Q25.1) MUTATED" "DEL PEAK 10(6Q25.1) WILD-TYPE" 
                   TCGA-DU-6407                    TCGA-DU-6408 
"DEL PEAK 10(6Q25.1) WILD-TYPE" "DEL PEAK 10(6Q25.1) WILD-TYPE" 
                   TCGA-DU-6410                    TCGA-DU-6542 
"DEL PEAK 10(6Q25.1) WILD-TYPE"   "DEL PEAK 10(6Q25.1) MUTATED" 
                   TCGA-DU-7006                    TCGA-DU-7007 
  "DEL PEAK 10(6Q25.1) MUTATED" "DEL PEAK 10(6Q25.1) WILD-TYPE" 
                   TCGA-DU-7008                    TCGA-DU-7009 
"DEL PEAK 10(6Q25.1) WILD-TYPE" "DEL PEAK 10(6Q25.1) WILD-TYPE" 
                   TCGA-DU-7010                    TCGA-DU-7011 
"DEL PEAK 10(6Q25.1) WILD-TYPE" "DEL PEAK 10(6Q25.1) WILD-TYPE" 
                   TCGA-DU-7012                    TCGA-DU-7013 
  "DEL PEAK 10(6Q25.1) MUTATED" "DEL PEAK 10(6Q25.1) WILD-TYPE" 
                   TCGA-DU-7014                    TCGA-DU-7015 
  "DEL PEAK 10(6Q25.1) MUTATED" "DEL PEAK 10(6Q25.1) WILD-TYPE" 
                   TCGA-DU-7018                    TCGA-DU-7019 
"DEL PEAK 10(6Q25.1) WILD-TYPE" "DEL PEAK 10(6Q25.1) WILD-TYPE" 
                   TCGA-DU-7290                    TCGA-DU-7292 
"DEL PEAK 10(6Q25.1) WILD-TYPE" "DEL PEAK 10(6Q25.1) WILD-TYPE" 
                   TCGA-DU-7294                    TCGA-DU-7298 
"DEL PEAK 10(6Q25.1) WILD-TYPE"   "DEL PEAK 10(6Q25.1) MUTATED" 
                   TCGA-DU-7299                    TCGA-DU-7300 
"DEL PEAK 10(6Q25.1) WILD-TYPE" "DEL PEAK 10(6Q25.1) WILD-TYPE" 
                   TCGA-DU-7301                    TCGA-DU-7302 
"DEL PEAK 10(6Q25.1) WILD-TYPE" "DEL PEAK 10(6Q25.1) WILD-TYPE" 
                   TCGA-DU-7304                    TCGA-DU-7306 
"DEL PEAK 10(6Q25.1) WILD-TYPE" "DEL PEAK 10(6Q25.1) WILD-TYPE" 
                   TCGA-DU-7309                    TCGA-E1-5302 
"DEL PEAK 10(6Q25.1) WILD-TYPE" "DEL PEAK 10(6Q25.1) WILD-TYPE" 
                   TCGA-E1-5303                    TCGA-E1-5304 
"DEL PEAK 10(6Q25.1) WILD-TYPE" "DEL PEAK 10(6Q25.1) WILD-TYPE" 
                   TCGA-E1-5305                    TCGA-E1-5307 
  "DEL PEAK 10(6Q25.1) MUTATED"   "DEL PEAK 10(6Q25.1) MUTATED" 
                   TCGA-E1-5311                    TCGA-E1-5318 
"DEL PEAK 10(6Q25.1) WILD-TYPE" "DEL PEAK 10(6Q25.1) WILD-TYPE" 
                   TCGA-E1-5319                    TCGA-E1-5322 
"DEL PEAK 10(6Q25.1) WILD-TYPE"   "DEL PEAK 10(6Q25.1) MUTATED" 
                   TCGA-EZ-7264                    TCGA-FG-5962 
"DEL PEAK 10(6Q25.1) WILD-TYPE" "DEL PEAK 10(6Q25.1) WILD-TYPE" 
                   TCGA-FG-5963                    TCGA-FG-5964 
  "DEL PEAK 10(6Q25.1) MUTATED" "DEL PEAK 10(6Q25.1) WILD-TYPE" 
                   TCGA-FG-5965                    TCGA-FG-6688 
"DEL PEAK 10(6Q25.1) WILD-TYPE" "DEL PEAK 10(6Q25.1) WILD-TYPE" 
                   TCGA-FG-6689                    TCGA-FG-6690 
"DEL PEAK 10(6Q25.1) WILD-TYPE" "DEL PEAK 10(6Q25.1) WILD-TYPE" 
                   TCGA-FG-6691                    TCGA-FG-6692 
"DEL PEAK 10(6Q25.1) WILD-TYPE" "DEL PEAK 10(6Q25.1) WILD-TYPE" 
                   TCGA-FG-7634                    TCGA-FG-7636 
"DEL PEAK 10(6Q25.1) WILD-TYPE"   "DEL PEAK 10(6Q25.1) MUTATED" 
                   TCGA-FG-7638                    TCGA-FG-7643 
"DEL PEAK 10(6Q25.1) WILD-TYPE" "DEL PEAK 10(6Q25.1) WILD-TYPE" 
                   TCGA-FN-7833                    TCGA-HT-7467 
  "DEL PEAK 10(6Q25.1) MUTATED" "DEL PEAK 10(6Q25.1) WILD-TYPE" 
                   TCGA-HT-7468                    TCGA-HT-7470 
"DEL PEAK 10(6Q25.1) WILD-TYPE" "DEL PEAK 10(6Q25.1) WILD-TYPE" 
                   TCGA-HT-7472                    TCGA-HT-7473 
  "DEL PEAK 10(6Q25.1) MUTATED" "DEL PEAK 10(6Q25.1) WILD-TYPE" 
                   TCGA-HT-7474                    TCGA-HT-7475 
"DEL PEAK 10(6Q25.1) WILD-TYPE"   "DEL PEAK 10(6Q25.1) MUTATED" 
                   TCGA-HT-7476                    TCGA-HT-7478 
"DEL PEAK 10(6Q25.1) WILD-TYPE" "DEL PEAK 10(6Q25.1) WILD-TYPE" 
                   TCGA-HT-7479                    TCGA-HT-7480 
"DEL PEAK 10(6Q25.1) WILD-TYPE" "DEL PEAK 10(6Q25.1) WILD-TYPE" 
                   TCGA-HT-7481                    TCGA-HT-7482 
"DEL PEAK 10(6Q25.1) WILD-TYPE" "DEL PEAK 10(6Q25.1) WILD-TYPE" 
                   TCGA-HT-7483                    TCGA-HT-7485 
"DEL PEAK 10(6Q25.1) WILD-TYPE" "DEL PEAK 10(6Q25.1) WILD-TYPE" 
                   TCGA-HT-7601                    TCGA-HT-7602 
"DEL PEAK 10(6Q25.1) WILD-TYPE" "DEL PEAK 10(6Q25.1) WILD-TYPE" 
                   TCGA-HT-7603                    TCGA-HT-7604 
"DEL PEAK 10(6Q25.1) WILD-TYPE" "DEL PEAK 10(6Q25.1) WILD-TYPE" 
                   TCGA-HT-7605                    TCGA-HT-7606 
"DEL PEAK 10(6Q25.1) WILD-TYPE"   "DEL PEAK 10(6Q25.1) MUTATED" 
                   TCGA-HT-7607                    TCGA-HT-7608 
"DEL PEAK 10(6Q25.1) WILD-TYPE" "DEL PEAK 10(6Q25.1) WILD-TYPE" 
                   TCGA-HT-7609                    TCGA-HT-7610 
"DEL PEAK 10(6Q25.1) WILD-TYPE" "DEL PEAK 10(6Q25.1) WILD-TYPE" 
                   TCGA-HW-7486                    TCGA-HW-7487 
"DEL PEAK 10(6Q25.1) WILD-TYPE" "DEL PEAK 10(6Q25.1) WILD-TYPE" 
                   TCGA-HW-7489                    TCGA-HW-7490 
"DEL PEAK 10(6Q25.1) WILD-TYPE" "DEL PEAK 10(6Q25.1) WILD-TYPE" 
                   TCGA-HW-7491                    TCGA-HW-7493 
"DEL PEAK 10(6Q25.1) WILD-TYPE" "DEL PEAK 10(6Q25.1) WILD-TYPE" 
                   TCGA-HW-7495                    TCGA-IK-7675 
"DEL PEAK 10(6Q25.1) WILD-TYPE" "DEL PEAK 10(6Q25.1) WILD-TYPE" 
                   TCGA-IK-8125 
"DEL PEAK 10(6Q25.1) WILD-TYPE" 
                   TCGA-CS-4938                    TCGA-CS-4941 
"DEL PEAK 10(6Q25.1) WILD-TYPE" "DEL PEAK 10(6Q25.1) WILD-TYPE" 
                   TCGA-CS-4942                    TCGA-CS-4943 
"DEL PEAK 10(6Q25.1) WILD-TYPE" "DEL PEAK 10(6Q25.1) WILD-TYPE" 
                   TCGA-CS-4944                    TCGA-CS-5390 
  "DEL PEAK 10(6Q25.1) MUTATED" "DEL PEAK 10(6Q25.1) WILD-TYPE" 
                   TCGA-CS-5393                    TCGA-CS-5394 
"DEL PEAK 10(6Q25.1) WILD-TYPE" "DEL PEAK 10(6Q25.1) WILD-TYPE" 
                   TCGA-CS-5395                    TCGA-CS-5396 
"DEL PEAK 10(6Q25.1) WILD-TYPE" "DEL PEAK 10(6Q25.1) WILD-TYPE" 
                   TCGA-CS-5397                    TCGA-CS-6186 
  "DEL PEAK 10(6Q25.1) MUTATED" "DEL PEAK 10(6Q25.1) WILD-TYPE" 
                   TCGA-CS-6188                    TCGA-CS-6290 
"DEL PEAK 10(6Q25.1) WILD-TYPE" "DEL PEAK 10(6Q25.1) WILD-TYPE" 
                   TCGA-CS-6665                    TCGA-CS-6666 
"DEL PEAK 10(6Q25.1) WILD-TYPE"   "DEL PEAK 10(6Q25.1) MUTATED" 
                   TCGA-CS-6667                    TCGA-CS-6668 
"DEL PEAK 10(6Q25.1) WILD-TYPE" "DEL PEAK 10(6Q25.1) WILD-TYPE" 
                   TCGA-CS-6669                    TCGA-CS-6670 
"DEL PEAK 10(6Q25.1) WILD-TYPE" "DEL PEAK 10(6Q25.1) WILD-TYPE" 
                   TCGA-DB-5270                    TCGA-DB-5273 
"DEL PEAK 10(6Q25.1) WILD-TYPE" "DEL PEAK 10(6Q25.1) WILD-TYPE" 
                   TCGA-DB-5274                    TCGA-DB-5275 
"DEL PEAK 10(6Q25.1) WILD-TYPE" "DEL PEAK 10(6Q25.1) WILD-TYPE" 
                   TCGA-DB-5276                    TCGA-DB-5277 
"DEL PEAK 10(6Q25.1) WILD-TYPE" "DEL PEAK 10(6Q25.1) WILD-TYPE" 
                   TCGA-DB-5278                    TCGA-DB-5279 
"DEL PEAK 10(6Q25.1) WILD-TYPE" "DEL PEAK 10(6Q25.1) WILD-TYPE" 
                   TCGA-DB-5280                    TCGA-DB-5281 
  "DEL PEAK 10(6Q25.1) MUTATED" "DEL PEAK 10(6Q25.1) WILD-TYPE" 
                   TCGA-DH-5140                    TCGA-DH-5141 
"DEL PEAK 10(6Q25.1) WILD-TYPE" "DEL PEAK 10(6Q25.1) WILD-TYPE" 
                   TCGA-DH-5142                    TCGA-DH-5143 
"DEL PEAK 10(6Q25.1) WILD-TYPE" "DEL PEAK 10(6Q25.1) WILD-TYPE" 
                   TCGA-DH-5144                    TCGA-DU-5847 
"DEL PEAK 10(6Q25.1) WILD-TYPE"   "DEL PEAK 10(6Q25.1) MUTATED" 
                   TCGA-DU-5849                    TCGA-DU-5851 
"DEL PEAK 10(6Q25.1) WILD-TYPE" "DEL PEAK 10(6Q25.1) WILD-TYPE" 
                   TCGA-DU-5852                    TCGA-DU-5853 
"DEL PEAK 10(6Q25.1) WILD-TYPE" "DEL PEAK 10(6Q25.1) WILD-TYPE" 
                   TCGA-DU-5854                    TCGA-DU-5855 
"DEL PEAK 10(6Q25.1) WILD-TYPE"   "DEL PEAK 10(6Q25.1) MUTATED" 
                   TCGA-DU-5870                    TCGA-DU-5871 
"DEL PEAK 10(6Q25.1) WILD-TYPE" "DEL PEAK 10(6Q25.1) WILD-TYPE" 
                   TCGA-DU-5872                    TCGA-DU-5874 
  "DEL PEAK 10(6Q25.1) MUTATED" "DEL PEAK 10(6Q25.1) WILD-TYPE" 
                   TCGA-DU-6392                    TCGA-DU-6393 
"DEL PEAK 10(6Q25.1) WILD-TYPE" "DEL PEAK 10(6Q25.1) WILD-TYPE" 
                   TCGA-DU-6394                    TCGA-DU-6395 
"DEL PEAK 10(6Q25.1) WILD-TYPE" "DEL PEAK 10(6Q25.1) WILD-TYPE" 
                   TCGA-DU-6396                    TCGA-DU-6397 
"DEL PEAK 10(6Q25.1) WILD-TYPE" "DEL PEAK 10(6Q25.1) WILD-TYPE" 
                   TCGA-DU-6399                    TCGA-DU-6400 
"DEL PEAK 10(6Q25.1) WILD-TYPE"   "DEL PEAK 10(6Q25.1) MUTATED" 
                   TCGA-DU-6401                    TCGA-DU-6402 
"DEL PEAK 10(6Q25.1) WILD-TYPE" "DEL PEAK 10(6Q25.1) WILD-TYPE" 
                   TCGA-DU-6403                    TCGA-DU-6404 
"DEL PEAK 10(6Q25.1) WILD-TYPE" "DEL PEAK 10(6Q25.1) WILD-TYPE" 
                   TCGA-DU-6405                    TCGA-DU-6406 
  "DEL PEAK 10(6Q25.1) MUTATED" "DEL PEAK 10(6Q25.1) WILD-TYPE" 
                   TCGA-DU-6407                    TCGA-DU-6408 
"DEL PEAK 10(6Q25.1) WILD-TYPE" "DEL PEAK 10(6Q25.1) WILD-TYPE" 
                   TCGA-DU-6410                    TCGA-DU-6542 
"DEL PEAK 10(6Q25.1) WILD-TYPE"   "DEL PEAK 10(6Q25.1) MUTATED" 
                   TCGA-DU-7006                    TCGA-DU-7007 
  "DEL PEAK 10(6Q25.1) MUTATED" "DEL PEAK 10(6Q25.1) WILD-TYPE" 
                   TCGA-DU-7008                    TCGA-DU-7009 
"DEL PEAK 10(6Q25.1) WILD-TYPE" "DEL PEAK 10(6Q25.1) WILD-TYPE" 
                   TCGA-DU-7010                    TCGA-DU-7011 
"DEL PEAK 10(6Q25.1) WILD-TYPE" "DEL PEAK 10(6Q25.1) WILD-TYPE" 
                   TCGA-DU-7012                    TCGA-DU-7013 
  "DEL PEAK 10(6Q25.1) MUTATED" "DEL PEAK 10(6Q25.1) WILD-TYPE" 
                   TCGA-DU-7014                    TCGA-DU-7015 
  "DEL PEAK 10(6Q25.1) MUTATED" "DEL PEAK 10(6Q25.1) WILD-TYPE" 
                   TCGA-DU-7018                    TCGA-DU-7019 
"DEL PEAK 10(6Q25.1) WILD-TYPE" "DEL PEAK 10(6Q25.1) WILD-TYPE" 
                   TCGA-DU-7290                    TCGA-DU-7292 
"DEL PEAK 10(6Q25.1) WILD-TYPE" "DEL PEAK 10(6Q25.1) WILD-TYPE" 
                   TCGA-DU-7294                    TCGA-DU-7298 
"DEL PEAK 10(6Q25.1) WILD-TYPE"   "DEL PEAK 10(6Q25.1) MUTATED" 
                   TCGA-DU-7299                    TCGA-DU-7300 
"DEL PEAK 10(6Q25.1) WILD-TYPE" "DEL PEAK 10(6Q25.1) WILD-TYPE" 
                   TCGA-DU-7301                    TCGA-DU-7302 
"DEL PEAK 10(6Q25.1) WILD-TYPE" "DEL PEAK 10(6Q25.1) WILD-TYPE" 
                   TCGA-DU-7304                    TCGA-DU-7306 
"DEL PEAK 10(6Q25.1) WILD-TYPE" "DEL PEAK 10(6Q25.1) WILD-TYPE" 
                   TCGA-DU-7309                    TCGA-E1-5302 
"DEL PEAK 10(6Q25.1) WILD-TYPE" "DEL PEAK 10(6Q25.1) WILD-TYPE" 
                   TCGA-E1-5303                    TCGA-E1-5304 
"DEL PEAK 10(6Q25.1) WILD-TYPE" "DEL PEAK 10(6Q25.1) WILD-TYPE" 
                   TCGA-E1-5305                    TCGA-E1-5307 
  "DEL PEAK 10(6Q25.1) MUTATED"   "DEL PEAK 10(6Q25.1) MUTATED" 
                   TCGA-E1-5311                    TCGA-E1-5318 
"DEL PEAK 10(6Q25.1) WILD-TYPE" "DEL PEAK 10(6Q25.1) WILD-TYPE" 
                   TCGA-E1-5319                    TCGA-E1-5322 
"DEL PEAK 10(6Q25.1) WILD-TYPE"   "DEL PEAK 10(6Q25.1) MUTATED" 
                   TCGA-EZ-7264                    TCGA-FG-5962 
"DEL PEAK 10(6Q25.1) WILD-TYPE" "DEL PEAK 10(6Q25.1) WILD-TYPE" 
                   TCGA-FG-5963                    TCGA-FG-5964 
  "DEL PEAK 10(6Q25.1) MUTATED" "DEL PEAK 10(6Q25.1) WILD-TYPE" 
                   TCGA-FG-5965                    TCGA-FG-6688 
"DEL PEAK 10(6Q25.1) WILD-TYPE" "DEL PEAK 10(6Q25.1) WILD-TYPE" 
                   TCGA-FG-6689                    TCGA-FG-6690 
"DEL PEAK 10(6Q25.1) WILD-TYPE" "DEL PEAK 10(6Q25.1) WILD-TYPE" 
                   TCGA-FG-6691                    TCGA-FG-6692 
"DEL PEAK 10(6Q25.1) WILD-TYPE" "DEL PEAK 10(6Q25.1) WILD-TYPE" 
                   TCGA-FG-7634                    TCGA-FG-7636 
"DEL PEAK 10(6Q25.1) WILD-TYPE"   "DEL PEAK 10(6Q25.1) MUTATED" 
                   TCGA-FG-7638                    TCGA-FG-7643 
"DEL PEAK 10(6Q25.1) WILD-TYPE" "DEL PEAK 10(6Q25.1) WILD-TYPE" 
                   TCGA-FN-7833                    TCGA-HT-7467 
  "DEL PEAK 10(6Q25.1) MUTATED" "DEL PEAK 10(6Q25.1) WILD-TYPE" 
                   TCGA-HT-7468                    TCGA-HT-7470 
"DEL PEAK 10(6Q25.1) WILD-TYPE" "DEL PEAK 10(6Q25.1) WILD-TYPE" 
                   TCGA-HT-7472                    TCGA-HT-7473 
  "DEL PEAK 10(6Q25.1) MUTATED" "DEL PEAK 10(6Q25.1) WILD-TYPE" 
                   TCGA-HT-7474                    TCGA-HT-7475 
"DEL PEAK 10(6Q25.1) WILD-TYPE"   "DEL PEAK 10(6Q25.1) MUTATED" 
                   TCGA-HT-7476                    TCGA-HT-7478 
"DEL PEAK 10(6Q25.1) WILD-TYPE" "DEL PEAK 10(6Q25.1) WILD-TYPE" 
                   TCGA-HT-7479                    TCGA-HT-7480 
"DEL PEAK 10(6Q25.1) WILD-TYPE" "DEL PEAK 10(6Q25.1) WILD-TYPE" 
                   TCGA-HT-7481                    TCGA-HT-7482 
"DEL PEAK 10(6Q25.1) WILD-TYPE" "DEL PEAK 10(6Q25.1) WILD-TYPE" 
                   TCGA-HT-7483                    TCGA-HT-7485 
"DEL PEAK 10(6Q25.1) WILD-TYPE" "DEL PEAK 10(6Q25.1) WILD-TYPE" 
                   TCGA-HT-7601                    TCGA-HT-7602 
"DEL PEAK 10(6Q25.1) WILD-TYPE" "DEL PEAK 10(6Q25.1) WILD-TYPE" 
                   TCGA-HT-7603                    TCGA-HT-7604 
"DEL PEAK 10(6Q25.1) WILD-TYPE" "DEL PEAK 10(6Q25.1) WILD-TYPE" 
                   TCGA-HT-7605                    TCGA-HT-7606 
"DEL PEAK 10(6Q25.1) WILD-TYPE"   "DEL PEAK 10(6Q25.1) MUTATED" 
                   TCGA-HT-7607                    TCGA-HT-7608 
"DEL PEAK 10(6Q25.1) WILD-TYPE" "DEL PEAK 10(6Q25.1) WILD-TYPE" 
                   TCGA-HT-7609                    TCGA-HT-7610 
"DEL PEAK 10(6Q25.1) WILD-TYPE" "DEL PEAK 10(6Q25.1) WILD-TYPE" 
                   TCGA-HW-7486                    TCGA-HW-7487 
"DEL PEAK 10(6Q25.1) WILD-TYPE" "DEL PEAK 10(6Q25.1) WILD-TYPE" 
                   TCGA-HW-7489                    TCGA-HW-7490 
"DEL PEAK 10(6Q25.1) WILD-TYPE" "DEL PEAK 10(6Q25.1) WILD-TYPE" 
                   TCGA-HW-7491                    TCGA-HW-7493 
"DEL PEAK 10(6Q25.1) WILD-TYPE" "DEL PEAK 10(6Q25.1) WILD-TYPE" 
                   TCGA-HW-7495                    TCGA-IK-7675 
"DEL PEAK 10(6Q25.1) WILD-TYPE" "DEL PEAK 10(6Q25.1) WILD-TYPE" 
                   TCGA-IK-8125 
"DEL PEAK 10(6Q25.1) WILD-TYPE" 
[1] "hr=" "2.1"
D24V2, continuous
D24V3, binary
[1] "tbl2"
                               cls
clus                            [,1] [,2]
  DEL PEAK 10(6Q25.1) MUTATED     12   11
  DEL PEAK 10(6Q25.1) WILD-TYPE   50   72
        clus
vv       DEL PEAK 10(6Q25.1) MUTATED DEL PEAK 10(6Q25.1) WILD-TYPE
  FEMALE                          12                            50
  MALE                            11                            72
D24V4, continuous
D24V5, multiclass
                   clus
vv                  DEL PEAK 10(6Q25.1) MUTATED DEL PEAK 10(6Q25.1) WILD-TYPE
  ASTROCYTOMA                                13                            37
  OLIGOASTROCYTOMA                            6                            30
  OLIGODENDROGLIOMA                           3                            55
D24V6, binary
[1] "tbl2"
                               cls
clus                            [,1] [,2]
  DEL PEAK 10(6Q25.1) MUTATED      4   19
  DEL PEAK 10(6Q25.1) WILD-TYPE   55   67
     clus
vv    DEL PEAK 10(6Q25.1) MUTATED DEL PEAK 10(6Q25.1) WILD-TYPE
  NO                           19                            67
  YES                           4                            55
D24V7, binary
[1] "tbl2"
                               cls
clus                            [,1] [,2]
  DEL PEAK 10(6Q25.1) MUTATED     10   13
  DEL PEAK 10(6Q25.1) WILD-TYPE   64   58
     clus
vv    DEL PEAK 10(6Q25.1) MUTATED DEL PEAK 10(6Q25.1) WILD-TYPE
  NO                           13                            58
  YES                          10                            64

Clustering(25) Variable = Del Peak 11(9p21.3) mutation analysis
D25V1, survival
                   TCGA-CS-4938                    TCGA-CS-4941 
"DEL PEAK 11(9P21.3) WILD-TYPE" "DEL PEAK 11(9P21.3) WILD-TYPE" 
                   TCGA-CS-4942                    TCGA-CS-4943 
"DEL PEAK 11(9P21.3) WILD-TYPE"   "DEL PEAK 11(9P21.3) MUTATED" 
                   TCGA-CS-4944                    TCGA-CS-5390 
"DEL PEAK 11(9P21.3) WILD-TYPE" "DEL PEAK 11(9P21.3) WILD-TYPE" 
                   TCGA-CS-5393                    TCGA-CS-5394 
  "DEL PEAK 11(9P21.3) MUTATED" "DEL PEAK 11(9P21.3) WILD-TYPE" 
                   TCGA-CS-5395                    TCGA-CS-5396 
  "DEL PEAK 11(9P21.3) MUTATED"   "DEL PEAK 11(9P21.3) MUTATED" 
                   TCGA-CS-5397                    TCGA-CS-6186 
  "DEL PEAK 11(9P21.3) MUTATED"   "DEL PEAK 11(9P21.3) MUTATED" 
                   TCGA-CS-6188                    TCGA-CS-6290 
  "DEL PEAK 11(9P21.3) MUTATED" "DEL PEAK 11(9P21.3) WILD-TYPE" 
                   TCGA-CS-6665                    TCGA-CS-6666 
"DEL PEAK 11(9P21.3) WILD-TYPE"   "DEL PEAK 11(9P21.3) MUTATED" 
                   TCGA-CS-6667                    TCGA-CS-6668 
"DEL PEAK 11(9P21.3) WILD-TYPE" "DEL PEAK 11(9P21.3) WILD-TYPE" 
                   TCGA-CS-6669                    TCGA-CS-6670 
"DEL PEAK 11(9P21.3) WILD-TYPE"   "DEL PEAK 11(9P21.3) MUTATED" 
                   TCGA-DB-5270                    TCGA-DB-5273 
"DEL PEAK 11(9P21.3) WILD-TYPE" "DEL PEAK 11(9P21.3) WILD-TYPE" 
                   TCGA-DB-5274                    TCGA-DB-5275 
"DEL PEAK 11(9P21.3) WILD-TYPE"   "DEL PEAK 11(9P21.3) MUTATED" 
                   TCGA-DB-5276                    TCGA-DB-5277 
"DEL PEAK 11(9P21.3) WILD-TYPE"   "DEL PEAK 11(9P21.3) MUTATED" 
                   TCGA-DB-5278                    TCGA-DB-5279 
"DEL PEAK 11(9P21.3) WILD-TYPE"   "DEL PEAK 11(9P21.3) MUTATED" 
                   TCGA-DB-5280                    TCGA-DB-5281 
"DEL PEAK 11(9P21.3) WILD-TYPE"   "DEL PEAK 11(9P21.3) MUTATED" 
                   TCGA-DH-5140                    TCGA-DH-5141 
  "DEL PEAK 11(9P21.3) MUTATED" "DEL PEAK 11(9P21.3) WILD-TYPE" 
                   TCGA-DH-5142                    TCGA-DH-5143 
"DEL PEAK 11(9P21.3) WILD-TYPE" "DEL PEAK 11(9P21.3) WILD-TYPE" 
                   TCGA-DH-5144                    TCGA-DU-5847 
"DEL PEAK 11(9P21.3) WILD-TYPE"   "DEL PEAK 11(9P21.3) MUTATED" 
                   TCGA-DU-5849                    TCGA-DU-5851 
"DEL PEAK 11(9P21.3) WILD-TYPE"   "DEL PEAK 11(9P21.3) MUTATED" 
                   TCGA-DU-5852                    TCGA-DU-5853 
  "DEL PEAK 11(9P21.3) MUTATED" "DEL PEAK 11(9P21.3) WILD-TYPE" 
                   TCGA-DU-5854                    TCGA-DU-5855 
  "DEL PEAK 11(9P21.3) MUTATED"   "DEL PEAK 11(9P21.3) MUTATED" 
                   TCGA-DU-5870                    TCGA-DU-5871 
"DEL PEAK 11(9P21.3) WILD-TYPE" "DEL PEAK 11(9P21.3) WILD-TYPE" 
                   TCGA-DU-5872                    TCGA-DU-5874 
"DEL PEAK 11(9P21.3) WILD-TYPE" "DEL PEAK 11(9P21.3) WILD-TYPE" 
                   TCGA-DU-6392                    TCGA-DU-6393 
"DEL PEAK 11(9P21.3) WILD-TYPE" "DEL PEAK 11(9P21.3) WILD-TYPE" 
                   TCGA-DU-6394                    TCGA-DU-6395 
"DEL PEAK 11(9P21.3) WILD-TYPE"   "DEL PEAK 11(9P21.3) MUTATED" 
                   TCGA-DU-6396                    TCGA-DU-6397 
"DEL PEAK 11(9P21.3) WILD-TYPE"   "DEL PEAK 11(9P21.3) MUTATED" 
                   TCGA-DU-6399                    TCGA-DU-6400 
  "DEL PEAK 11(9P21.3) MUTATED" "DEL PEAK 11(9P21.3) WILD-TYPE" 
                   TCGA-DU-6401                    TCGA-DU-6402 
"DEL PEAK 11(9P21.3) WILD-TYPE"   "DEL PEAK 11(9P21.3) MUTATED" 
                   TCGA-DU-6403                    TCGA-DU-6404 
  "DEL PEAK 11(9P21.3) MUTATED" "DEL PEAK 11(9P21.3) WILD-TYPE" 
                   TCGA-DU-6405                    TCGA-DU-6406 
  "DEL PEAK 11(9P21.3) MUTATED"   "DEL PEAK 11(9P21.3) MUTATED" 
                   TCGA-DU-6407                    TCGA-DU-6408 
  "DEL PEAK 11(9P21.3) MUTATED" "DEL PEAK 11(9P21.3) WILD-TYPE" 
                   TCGA-DU-6410                    TCGA-DU-6542 
"DEL PEAK 11(9P21.3) WILD-TYPE"   "DEL PEAK 11(9P21.3) MUTATED" 
                   TCGA-DU-7006                    TCGA-DU-7007 
  "DEL PEAK 11(9P21.3) MUTATED"   "DEL PEAK 11(9P21.3) MUTATED" 
                   TCGA-DU-7008                    TCGA-DU-7009 
"DEL PEAK 11(9P21.3) WILD-TYPE" "DEL PEAK 11(9P21.3) WILD-TYPE" 
                   TCGA-DU-7010                    TCGA-DU-7011 
"DEL PEAK 11(9P21.3) WILD-TYPE" "DEL PEAK 11(9P21.3) WILD-TYPE" 
                   TCGA-DU-7012                    TCGA-DU-7013 
  "DEL PEAK 11(9P21.3) MUTATED" "DEL PEAK 11(9P21.3) WILD-TYPE" 
                   TCGA-DU-7014                    TCGA-DU-7015 
  "DEL PEAK 11(9P21.3) MUTATED"   "DEL PEAK 11(9P21.3) MUTATED" 
                   TCGA-DU-7018                    TCGA-DU-7019 
  "DEL PEAK 11(9P21.3) MUTATED"   "DEL PEAK 11(9P21.3) MUTATED" 
                   TCGA-DU-7290                    TCGA-DU-7292 
"DEL PEAK 11(9P21.3) WILD-TYPE"   "DEL PEAK 11(9P21.3) MUTATED" 
                   TCGA-DU-7294                    TCGA-DU-7298 
"DEL PEAK 11(9P21.3) WILD-TYPE"   "DEL PEAK 11(9P21.3) MUTATED" 
                   TCGA-DU-7299                    TCGA-DU-7300 
"DEL PEAK 11(9P21.3) WILD-TYPE" "DEL PEAK 11(9P21.3) WILD-TYPE" 
                   TCGA-DU-7301                    TCGA-DU-7302 
  "DEL PEAK 11(9P21.3) MUTATED"   "DEL PEAK 11(9P21.3) MUTATED" 
                   TCGA-DU-7304                    TCGA-DU-7306 
  "DEL PEAK 11(9P21.3) MUTATED"   "DEL PEAK 11(9P21.3) MUTATED" 
                   TCGA-DU-7309                    TCGA-E1-5302 
"DEL PEAK 11(9P21.3) WILD-TYPE" "DEL PEAK 11(9P21.3) WILD-TYPE" 
                   TCGA-E1-5303                    TCGA-E1-5304 
"DEL PEAK 11(9P21.3) WILD-TYPE"   "DEL PEAK 11(9P21.3) MUTATED" 
                   TCGA-E1-5305                    TCGA-E1-5307 
"DEL PEAK 11(9P21.3) WILD-TYPE"   "DEL PEAK 11(9P21.3) MUTATED" 
                   TCGA-E1-5311                    TCGA-E1-5318 
"DEL PEAK 11(9P21.3) WILD-TYPE" "DEL PEAK 11(9P21.3) WILD-TYPE" 
                   TCGA-E1-5319                    TCGA-E1-5322 
"DEL PEAK 11(9P21.3) WILD-TYPE" "DEL PEAK 11(9P21.3) WILD-TYPE" 
                   TCGA-EZ-7264                    TCGA-FG-5962 
  "DEL PEAK 11(9P21.3) MUTATED" "DEL PEAK 11(9P21.3) WILD-TYPE" 
                   TCGA-FG-5963                    TCGA-FG-5964 
  "DEL PEAK 11(9P21.3) MUTATED"   "DEL PEAK 11(9P21.3) MUTATED" 
                   TCGA-FG-5965                    TCGA-FG-6688 
  "DEL PEAK 11(9P21.3) MUTATED" "DEL PEAK 11(9P21.3) WILD-TYPE" 
                   TCGA-FG-6689                    TCGA-FG-6690 
"DEL PEAK 11(9P21.3) WILD-TYPE"   "DEL PEAK 11(9P21.3) MUTATED" 
                   TCGA-FG-6691                    TCGA-FG-6692 
"DEL PEAK 11(9P21.3) WILD-TYPE"   "DEL PEAK 11(9P21.3) MUTATED" 
                   TCGA-FG-7634                    TCGA-FG-7636 
"DEL PEAK 11(9P21.3) WILD-TYPE"   "DEL PEAK 11(9P21.3) MUTATED" 
                   TCGA-FG-7638                    TCGA-FG-7643 
"DEL PEAK 11(9P21.3) WILD-TYPE" "DEL PEAK 11(9P21.3) WILD-TYPE" 
                   TCGA-FN-7833                    TCGA-HT-7467 
"DEL PEAK 11(9P21.3) WILD-TYPE" "DEL PEAK 11(9P21.3) WILD-TYPE" 
                   TCGA-HT-7468                    TCGA-HT-7470 
"DEL PEAK 11(9P21.3) WILD-TYPE"   "DEL PEAK 11(9P21.3) MUTATED" 
                   TCGA-HT-7472                    TCGA-HT-7473 
"DEL PEAK 11(9P21.3) WILD-TYPE" "DEL PEAK 11(9P21.3) WILD-TYPE" 
                   TCGA-HT-7474                    TCGA-HT-7475 
"DEL PEAK 11(9P21.3) WILD-TYPE"   "DEL PEAK 11(9P21.3) MUTATED" 
                   TCGA-HT-7476                    TCGA-HT-7478 
  "DEL PEAK 11(9P21.3) MUTATED" "DEL PEAK 11(9P21.3) WILD-TYPE" 
                   TCGA-HT-7479                    TCGA-HT-7480 
"DEL PEAK 11(9P21.3) WILD-TYPE" "DEL PEAK 11(9P21.3) WILD-TYPE" 
                   TCGA-HT-7481                    TCGA-HT-7482 
"DEL PEAK 11(9P21.3) WILD-TYPE" "DEL PEAK 11(9P21.3) WILD-TYPE" 
                   TCGA-HT-7483                    TCGA-HT-7485 
"DEL PEAK 11(9P21.3) WILD-TYPE" "DEL PEAK 11(9P21.3) WILD-TYPE" 
                   TCGA-HT-7601                    TCGA-HT-7602 
"DEL PEAK 11(9P21.3) WILD-TYPE" "DEL PEAK 11(9P21.3) WILD-TYPE" 
                   TCGA-HT-7603                    TCGA-HT-7604 
"DEL PEAK 11(9P21.3) WILD-TYPE" "DEL PEAK 11(9P21.3) WILD-TYPE" 
                   TCGA-HT-7605                    TCGA-HT-7606 
"DEL PEAK 11(9P21.3) WILD-TYPE"   "DEL PEAK 11(9P21.3) MUTATED" 
                   TCGA-HT-7607                    TCGA-HT-7608 
"DEL PEAK 11(9P21.3) WILD-TYPE" "DEL PEAK 11(9P21.3) WILD-TYPE" 
                   TCGA-HT-7609                    TCGA-HT-7610 
"DEL PEAK 11(9P21.3) WILD-TYPE" "DEL PEAK 11(9P21.3) WILD-TYPE" 
                   TCGA-HW-7486                    TCGA-HW-7487 
"DEL PEAK 11(9P21.3) WILD-TYPE" "DEL PEAK 11(9P21.3) WILD-TYPE" 
                   TCGA-HW-7489                    TCGA-HW-7490 
"DEL PEAK 11(9P21.3) WILD-TYPE"   "DEL PEAK 11(9P21.3) MUTATED" 
                   TCGA-HW-7491                    TCGA-HW-7493 
"DEL PEAK 11(9P21.3) WILD-TYPE" "DEL PEAK 11(9P21.3) WILD-TYPE" 
                   TCGA-HW-7495                    TCGA-IK-7675 
"DEL PEAK 11(9P21.3) WILD-TYPE"   "DEL PEAK 11(9P21.3) MUTATED" 
                   TCGA-IK-8125 
"DEL PEAK 11(9P21.3) WILD-TYPE" 
                   TCGA-CS-4938                    TCGA-CS-4941 
"DEL PEAK 11(9P21.3) WILD-TYPE" "DEL PEAK 11(9P21.3) WILD-TYPE" 
                   TCGA-CS-4942                    TCGA-CS-4943 
"DEL PEAK 11(9P21.3) WILD-TYPE"   "DEL PEAK 11(9P21.3) MUTATED" 
                   TCGA-CS-4944                    TCGA-CS-5390 
"DEL PEAK 11(9P21.3) WILD-TYPE" "DEL PEAK 11(9P21.3) WILD-TYPE" 
                   TCGA-CS-5393                    TCGA-CS-5394 
  "DEL PEAK 11(9P21.3) MUTATED" "DEL PEAK 11(9P21.3) WILD-TYPE" 
                   TCGA-CS-5395                    TCGA-CS-5396 
  "DEL PEAK 11(9P21.3) MUTATED"   "DEL PEAK 11(9P21.3) MUTATED" 
                   TCGA-CS-5397                    TCGA-CS-6186 
  "DEL PEAK 11(9P21.3) MUTATED"   "DEL PEAK 11(9P21.3) MUTATED" 
                   TCGA-CS-6188                    TCGA-CS-6290 
  "DEL PEAK 11(9P21.3) MUTATED" "DEL PEAK 11(9P21.3) WILD-TYPE" 
                   TCGA-CS-6665                    TCGA-CS-6666 
"DEL PEAK 11(9P21.3) WILD-TYPE"   "DEL PEAK 11(9P21.3) MUTATED" 
                   TCGA-CS-6667                    TCGA-CS-6668 
"DEL PEAK 11(9P21.3) WILD-TYPE" "DEL PEAK 11(9P21.3) WILD-TYPE" 
                   TCGA-CS-6669                    TCGA-CS-6670 
"DEL PEAK 11(9P21.3) WILD-TYPE"   "DEL PEAK 11(9P21.3) MUTATED" 
                   TCGA-DB-5270                    TCGA-DB-5273 
"DEL PEAK 11(9P21.3) WILD-TYPE" "DEL PEAK 11(9P21.3) WILD-TYPE" 
                   TCGA-DB-5274                    TCGA-DB-5275 
"DEL PEAK 11(9P21.3) WILD-TYPE"   "DEL PEAK 11(9P21.3) MUTATED" 
                   TCGA-DB-5276                    TCGA-DB-5277 
"DEL PEAK 11(9P21.3) WILD-TYPE"   "DEL PEAK 11(9P21.3) MUTATED" 
                   TCGA-DB-5278                    TCGA-DB-5279 
"DEL PEAK 11(9P21.3) WILD-TYPE"   "DEL PEAK 11(9P21.3) MUTATED" 
                   TCGA-DB-5280                    TCGA-DB-5281 
"DEL PEAK 11(9P21.3) WILD-TYPE"   "DEL PEAK 11(9P21.3) MUTATED" 
                   TCGA-DH-5140                    TCGA-DH-5141 
  "DEL PEAK 11(9P21.3) MUTATED" "DEL PEAK 11(9P21.3) WILD-TYPE" 
                   TCGA-DH-5142                    TCGA-DH-5143 
"DEL PEAK 11(9P21.3) WILD-TYPE" "DEL PEAK 11(9P21.3) WILD-TYPE" 
                   TCGA-DH-5144                    TCGA-DU-5847 
"DEL PEAK 11(9P21.3) WILD-TYPE"   "DEL PEAK 11(9P21.3) MUTATED" 
                   TCGA-DU-5849                    TCGA-DU-5851 
"DEL PEAK 11(9P21.3) WILD-TYPE"   "DEL PEAK 11(9P21.3) MUTATED" 
                   TCGA-DU-5852                    TCGA-DU-5853 
  "DEL PEAK 11(9P21.3) MUTATED" "DEL PEAK 11(9P21.3) WILD-TYPE" 
                   TCGA-DU-5854                    TCGA-DU-5855 
  "DEL PEAK 11(9P21.3) MUTATED"   "DEL PEAK 11(9P21.3) MUTATED" 
                   TCGA-DU-5870                    TCGA-DU-5871 
"DEL PEAK 11(9P21.3) WILD-TYPE" "DEL PEAK 11(9P21.3) WILD-TYPE" 
                   TCGA-DU-5872                    TCGA-DU-5874 
"DEL PEAK 11(9P21.3) WILD-TYPE" "DEL PEAK 11(9P21.3) WILD-TYPE" 
                   TCGA-DU-6392                    TCGA-DU-6393 
"DEL PEAK 11(9P21.3) WILD-TYPE" "DEL PEAK 11(9P21.3) WILD-TYPE" 
                   TCGA-DU-6394                    TCGA-DU-6395 
"DEL PEAK 11(9P21.3) WILD-TYPE"   "DEL PEAK 11(9P21.3) MUTATED" 
                   TCGA-DU-6396                    TCGA-DU-6397 
"DEL PEAK 11(9P21.3) WILD-TYPE"   "DEL PEAK 11(9P21.3) MUTATED" 
                   TCGA-DU-6399                    TCGA-DU-6400 
  "DEL PEAK 11(9P21.3) MUTATED" "DEL PEAK 11(9P21.3) WILD-TYPE" 
                   TCGA-DU-6401                    TCGA-DU-6402 
"DEL PEAK 11(9P21.3) WILD-TYPE"   "DEL PEAK 11(9P21.3) MUTATED" 
                   TCGA-DU-6403                    TCGA-DU-6404 
  "DEL PEAK 11(9P21.3) MUTATED" "DEL PEAK 11(9P21.3) WILD-TYPE" 
                   TCGA-DU-6405                    TCGA-DU-6406 
  "DEL PEAK 11(9P21.3) MUTATED"   "DEL PEAK 11(9P21.3) MUTATED" 
                   TCGA-DU-6407                    TCGA-DU-6408 
  "DEL PEAK 11(9P21.3) MUTATED" "DEL PEAK 11(9P21.3) WILD-TYPE" 
                   TCGA-DU-6410                    TCGA-DU-6542 
"DEL PEAK 11(9P21.3) WILD-TYPE"   "DEL PEAK 11(9P21.3) MUTATED" 
                   TCGA-DU-7006                    TCGA-DU-7007 
  "DEL PEAK 11(9P21.3) MUTATED"   "DEL PEAK 11(9P21.3) MUTATED" 
                   TCGA-DU-7008                    TCGA-DU-7009 
"DEL PEAK 11(9P21.3) WILD-TYPE" "DEL PEAK 11(9P21.3) WILD-TYPE" 
                   TCGA-DU-7010                    TCGA-DU-7011 
"DEL PEAK 11(9P21.3) WILD-TYPE" "DEL PEAK 11(9P21.3) WILD-TYPE" 
                   TCGA-DU-7012                    TCGA-DU-7013 
  "DEL PEAK 11(9P21.3) MUTATED" "DEL PEAK 11(9P21.3) WILD-TYPE" 
                   TCGA-DU-7014                    TCGA-DU-7015 
  "DEL PEAK 11(9P21.3) MUTATED"   "DEL PEAK 11(9P21.3) MUTATED" 
                   TCGA-DU-7018                    TCGA-DU-7019 
  "DEL PEAK 11(9P21.3) MUTATED"   "DEL PEAK 11(9P21.3) MUTATED" 
                   TCGA-DU-7290                    TCGA-DU-7292 
"DEL PEAK 11(9P21.3) WILD-TYPE"   "DEL PEAK 11(9P21.3) MUTATED" 
                   TCGA-DU-7294                    TCGA-DU-7298 
"DEL PEAK 11(9P21.3) WILD-TYPE"   "DEL PEAK 11(9P21.3) MUTATED" 
                   TCGA-DU-7299                    TCGA-DU-7300 
"DEL PEAK 11(9P21.3) WILD-TYPE" "DEL PEAK 11(9P21.3) WILD-TYPE" 
                   TCGA-DU-7301                    TCGA-DU-7302 
  "DEL PEAK 11(9P21.3) MUTATED"   "DEL PEAK 11(9P21.3) MUTATED" 
                   TCGA-DU-7304                    TCGA-DU-7306 
  "DEL PEAK 11(9P21.3) MUTATED"   "DEL PEAK 11(9P21.3) MUTATED" 
                   TCGA-DU-7309                    TCGA-E1-5302 
"DEL PEAK 11(9P21.3) WILD-TYPE" "DEL PEAK 11(9P21.3) WILD-TYPE" 
                   TCGA-E1-5303                    TCGA-E1-5304 
"DEL PEAK 11(9P21.3) WILD-TYPE"   "DEL PEAK 11(9P21.3) MUTATED" 
                   TCGA-E1-5305                    TCGA-E1-5307 
"DEL PEAK 11(9P21.3) WILD-TYPE"   "DEL PEAK 11(9P21.3) MUTATED" 
                   TCGA-E1-5311                    TCGA-E1-5318 
"DEL PEAK 11(9P21.3) WILD-TYPE" "DEL PEAK 11(9P21.3) WILD-TYPE" 
                   TCGA-E1-5319                    TCGA-E1-5322 
"DEL PEAK 11(9P21.3) WILD-TYPE" "DEL PEAK 11(9P21.3) WILD-TYPE" 
                   TCGA-EZ-7264                    TCGA-FG-5962 
  "DEL PEAK 11(9P21.3) MUTATED" "DEL PEAK 11(9P21.3) WILD-TYPE" 
                   TCGA-FG-5963                    TCGA-FG-5964 
  "DEL PEAK 11(9P21.3) MUTATED"   "DEL PEAK 11(9P21.3) MUTATED" 
                   TCGA-FG-5965                    TCGA-FG-6688 
  "DEL PEAK 11(9P21.3) MUTATED" "DEL PEAK 11(9P21.3) WILD-TYPE" 
                   TCGA-FG-6689                    TCGA-FG-6690 
"DEL PEAK 11(9P21.3) WILD-TYPE"   "DEL PEAK 11(9P21.3) MUTATED" 
                   TCGA-FG-6691                    TCGA-FG-6692 
"DEL PEAK 11(9P21.3) WILD-TYPE"   "DEL PEAK 11(9P21.3) MUTATED" 
                   TCGA-FG-7634                    TCGA-FG-7636 
"DEL PEAK 11(9P21.3) WILD-TYPE"   "DEL PEAK 11(9P21.3) MUTATED" 
                   TCGA-FG-7638                    TCGA-FG-7643 
"DEL PEAK 11(9P21.3) WILD-TYPE" "DEL PEAK 11(9P21.3) WILD-TYPE" 
                   TCGA-FN-7833                    TCGA-HT-7467 
"DEL PEAK 11(9P21.3) WILD-TYPE" "DEL PEAK 11(9P21.3) WILD-TYPE" 
                   TCGA-HT-7468                    TCGA-HT-7470 
"DEL PEAK 11(9P21.3) WILD-TYPE"   "DEL PEAK 11(9P21.3) MUTATED" 
                   TCGA-HT-7472                    TCGA-HT-7473 
"DEL PEAK 11(9P21.3) WILD-TYPE" "DEL PEAK 11(9P21.3) WILD-TYPE" 
                   TCGA-HT-7474                    TCGA-HT-7475 
"DEL PEAK 11(9P21.3) WILD-TYPE"   "DEL PEAK 11(9P21.3) MUTATED" 
                   TCGA-HT-7476                    TCGA-HT-7478 
  "DEL PEAK 11(9P21.3) MUTATED" "DEL PEAK 11(9P21.3) WILD-TYPE" 
                   TCGA-HT-7479                    TCGA-HT-7480 
"DEL PEAK 11(9P21.3) WILD-TYPE" "DEL PEAK 11(9P21.3) WILD-TYPE" 
                   TCGA-HT-7481                    TCGA-HT-7482 
"DEL PEAK 11(9P21.3) WILD-TYPE" "DEL PEAK 11(9P21.3) WILD-TYPE" 
                   TCGA-HT-7483                    TCGA-HT-7485 
"DEL PEAK 11(9P21.3) WILD-TYPE" "DEL PEAK 11(9P21.3) WILD-TYPE" 
                   TCGA-HT-7601                    TCGA-HT-7602 
"DEL PEAK 11(9P21.3) WILD-TYPE" "DEL PEAK 11(9P21.3) WILD-TYPE" 
                   TCGA-HT-7603                    TCGA-HT-7604 
"DEL PEAK 11(9P21.3) WILD-TYPE" "DEL PEAK 11(9P21.3) WILD-TYPE" 
                   TCGA-HT-7605                    TCGA-HT-7606 
"DEL PEAK 11(9P21.3) WILD-TYPE"   "DEL PEAK 11(9P21.3) MUTATED" 
                   TCGA-HT-7607                    TCGA-HT-7608 
"DEL PEAK 11(9P21.3) WILD-TYPE" "DEL PEAK 11(9P21.3) WILD-TYPE" 
                   TCGA-HT-7609                    TCGA-HT-7610 
"DEL PEAK 11(9P21.3) WILD-TYPE" "DEL PEAK 11(9P21.3) WILD-TYPE" 
                   TCGA-HW-7486                    TCGA-HW-7487 
"DEL PEAK 11(9P21.3) WILD-TYPE" "DEL PEAK 11(9P21.3) WILD-TYPE" 
                   TCGA-HW-7489                    TCGA-HW-7490 
"DEL PEAK 11(9P21.3) WILD-TYPE"   "DEL PEAK 11(9P21.3) MUTATED" 
                   TCGA-HW-7491                    TCGA-HW-7493 
"DEL PEAK 11(9P21.3) WILD-TYPE" "DEL PEAK 11(9P21.3) WILD-TYPE" 
                   TCGA-HW-7495                    TCGA-IK-7675 
"DEL PEAK 11(9P21.3) WILD-TYPE"   "DEL PEAK 11(9P21.3) MUTATED" 
                   TCGA-IK-8125 
"DEL PEAK 11(9P21.3) WILD-TYPE" 
                   TCGA-CS-4938                    TCGA-CS-4941 
"DEL PEAK 11(9P21.3) WILD-TYPE" "DEL PEAK 11(9P21.3) WILD-TYPE" 
                   TCGA-CS-4942                    TCGA-CS-4943 
"DEL PEAK 11(9P21.3) WILD-TYPE"   "DEL PEAK 11(9P21.3) MUTATED" 
                   TCGA-CS-4944                    TCGA-CS-5390 
"DEL PEAK 11(9P21.3) WILD-TYPE" "DEL PEAK 11(9P21.3) WILD-TYPE" 
                   TCGA-CS-5393                    TCGA-CS-5394 
  "DEL PEAK 11(9P21.3) MUTATED" "DEL PEAK 11(9P21.3) WILD-TYPE" 
                   TCGA-CS-5395                    TCGA-CS-5396 
  "DEL PEAK 11(9P21.3) MUTATED"   "DEL PEAK 11(9P21.3) MUTATED" 
                   TCGA-CS-5397                    TCGA-CS-6186 
  "DEL PEAK 11(9P21.3) MUTATED"   "DEL PEAK 11(9P21.3) MUTATED" 
                   TCGA-CS-6188                    TCGA-CS-6290 
  "DEL PEAK 11(9P21.3) MUTATED" "DEL PEAK 11(9P21.3) WILD-TYPE" 
                   TCGA-CS-6665                    TCGA-CS-6666 
"DEL PEAK 11(9P21.3) WILD-TYPE"   "DEL PEAK 11(9P21.3) MUTATED" 
                   TCGA-CS-6667                    TCGA-CS-6668 
"DEL PEAK 11(9P21.3) WILD-TYPE" "DEL PEAK 11(9P21.3) WILD-TYPE" 
                   TCGA-CS-6669                    TCGA-CS-6670 
"DEL PEAK 11(9P21.3) WILD-TYPE"   "DEL PEAK 11(9P21.3) MUTATED" 
                   TCGA-DB-5270                    TCGA-DB-5273 
"DEL PEAK 11(9P21.3) WILD-TYPE" "DEL PEAK 11(9P21.3) WILD-TYPE" 
                   TCGA-DB-5274                    TCGA-DB-5275 
"DEL PEAK 11(9P21.3) WILD-TYPE"   "DEL PEAK 11(9P21.3) MUTATED" 
                   TCGA-DB-5276                    TCGA-DB-5277 
"DEL PEAK 11(9P21.3) WILD-TYPE"   "DEL PEAK 11(9P21.3) MUTATED" 
                   TCGA-DB-5278                    TCGA-DB-5279 
"DEL PEAK 11(9P21.3) WILD-TYPE"   "DEL PEAK 11(9P21.3) MUTATED" 
                   TCGA-DB-5280                    TCGA-DB-5281 
"DEL PEAK 11(9P21.3) WILD-TYPE"   "DEL PEAK 11(9P21.3) MUTATED" 
                   TCGA-DH-5140                    TCGA-DH-5141 
  "DEL PEAK 11(9P21.3) MUTATED" "DEL PEAK 11(9P21.3) WILD-TYPE" 
                   TCGA-DH-5142                    TCGA-DH-5143 
"DEL PEAK 11(9P21.3) WILD-TYPE" "DEL PEAK 11(9P21.3) WILD-TYPE" 
                   TCGA-DH-5144                    TCGA-DU-5847 
"DEL PEAK 11(9P21.3) WILD-TYPE"   "DEL PEAK 11(9P21.3) MUTATED" 
                   TCGA-DU-5849                    TCGA-DU-5851 
"DEL PEAK 11(9P21.3) WILD-TYPE"   "DEL PEAK 11(9P21.3) MUTATED" 
                   TCGA-DU-5852                    TCGA-DU-5853 
  "DEL PEAK 11(9P21.3) MUTATED" "DEL PEAK 11(9P21.3) WILD-TYPE" 
                   TCGA-DU-5854                    TCGA-DU-5855 
  "DEL PEAK 11(9P21.3) MUTATED"   "DEL PEAK 11(9P21.3) MUTATED" 
                   TCGA-DU-5870                    TCGA-DU-5871 
"DEL PEAK 11(9P21.3) WILD-TYPE" "DEL PEAK 11(9P21.3) WILD-TYPE" 
                   TCGA-DU-5872                    TCGA-DU-5874 
"DEL PEAK 11(9P21.3) WILD-TYPE" "DEL PEAK 11(9P21.3) WILD-TYPE" 
                   TCGA-DU-6392                    TCGA-DU-6393 
"DEL PEAK 11(9P21.3) WILD-TYPE" "DEL PEAK 11(9P21.3) WILD-TYPE" 
                   TCGA-DU-6394                    TCGA-DU-6395 
"DEL PEAK 11(9P21.3) WILD-TYPE"   "DEL PEAK 11(9P21.3) MUTATED" 
                   TCGA-DU-6396                    TCGA-DU-6397 
"DEL PEAK 11(9P21.3) WILD-TYPE"   "DEL PEAK 11(9P21.3) MUTATED" 
                   TCGA-DU-6399                    TCGA-DU-6400 
  "DEL PEAK 11(9P21.3) MUTATED" "DEL PEAK 11(9P21.3) WILD-TYPE" 
                   TCGA-DU-6401                    TCGA-DU-6402 
"DEL PEAK 11(9P21.3) WILD-TYPE"   "DEL PEAK 11(9P21.3) MUTATED" 
                   TCGA-DU-6403                    TCGA-DU-6404 
  "DEL PEAK 11(9P21.3) MUTATED" "DEL PEAK 11(9P21.3) WILD-TYPE" 
                   TCGA-DU-6405                    TCGA-DU-6406 
  "DEL PEAK 11(9P21.3) MUTATED"   "DEL PEAK 11(9P21.3) MUTATED" 
                   TCGA-DU-6407                    TCGA-DU-6408 
  "DEL PEAK 11(9P21.3) MUTATED" "DEL PEAK 11(9P21.3) WILD-TYPE" 
                   TCGA-DU-6410                    TCGA-DU-6542 
"DEL PEAK 11(9P21.3) WILD-TYPE"   "DEL PEAK 11(9P21.3) MUTATED" 
                   TCGA-DU-7006                    TCGA-DU-7007 
  "DEL PEAK 11(9P21.3) MUTATED"   "DEL PEAK 11(9P21.3) MUTATED" 
                   TCGA-DU-7008                    TCGA-DU-7009 
"DEL PEAK 11(9P21.3) WILD-TYPE" "DEL PEAK 11(9P21.3) WILD-TYPE" 
                   TCGA-DU-7010                    TCGA-DU-7011 
"DEL PEAK 11(9P21.3) WILD-TYPE" "DEL PEAK 11(9P21.3) WILD-TYPE" 
                   TCGA-DU-7012                    TCGA-DU-7013 
  "DEL PEAK 11(9P21.3) MUTATED" "DEL PEAK 11(9P21.3) WILD-TYPE" 
                   TCGA-DU-7014                    TCGA-DU-7015 
  "DEL PEAK 11(9P21.3) MUTATED"   "DEL PEAK 11(9P21.3) MUTATED" 
                   TCGA-DU-7018                    TCGA-DU-7019 
  "DEL PEAK 11(9P21.3) MUTATED"   "DEL PEAK 11(9P21.3) MUTATED" 
                   TCGA-DU-7290                    TCGA-DU-7292 
"DEL PEAK 11(9P21.3) WILD-TYPE"   "DEL PEAK 11(9P21.3) MUTATED" 
                   TCGA-DU-7294                    TCGA-DU-7298 
"DEL PEAK 11(9P21.3) WILD-TYPE"   "DEL PEAK 11(9P21.3) MUTATED" 
                   TCGA-DU-7299                    TCGA-DU-7300 
"DEL PEAK 11(9P21.3) WILD-TYPE" "DEL PEAK 11(9P21.3) WILD-TYPE" 
                   TCGA-DU-7301                    TCGA-DU-7302 
  "DEL PEAK 11(9P21.3) MUTATED"   "DEL PEAK 11(9P21.3) MUTATED" 
                   TCGA-DU-7304                    TCGA-DU-7306 
  "DEL PEAK 11(9P21.3) MUTATED"   "DEL PEAK 11(9P21.3) MUTATED" 
                   TCGA-DU-7309                    TCGA-E1-5302 
"DEL PEAK 11(9P21.3) WILD-TYPE" "DEL PEAK 11(9P21.3) WILD-TYPE" 
                   TCGA-E1-5303                    TCGA-E1-5304 
"DEL PEAK 11(9P21.3) WILD-TYPE"   "DEL PEAK 11(9P21.3) MUTATED" 
                   TCGA-E1-5305                    TCGA-E1-5307 
"DEL PEAK 11(9P21.3) WILD-TYPE"   "DEL PEAK 11(9P21.3) MUTATED" 
                   TCGA-E1-5311                    TCGA-E1-5318 
"DEL PEAK 11(9P21.3) WILD-TYPE" "DEL PEAK 11(9P21.3) WILD-TYPE" 
                   TCGA-E1-5319                    TCGA-E1-5322 
"DEL PEAK 11(9P21.3) WILD-TYPE" "DEL PEAK 11(9P21.3) WILD-TYPE" 
                   TCGA-EZ-7264                    TCGA-FG-5962 
  "DEL PEAK 11(9P21.3) MUTATED" "DEL PEAK 11(9P21.3) WILD-TYPE" 
                   TCGA-FG-5963                    TCGA-FG-5964 
  "DEL PEAK 11(9P21.3) MUTATED"   "DEL PEAK 11(9P21.3) MUTATED" 
                   TCGA-FG-5965                    TCGA-FG-6688 
  "DEL PEAK 11(9P21.3) MUTATED" "DEL PEAK 11(9P21.3) WILD-TYPE" 
                   TCGA-FG-6689                    TCGA-FG-6690 
"DEL PEAK 11(9P21.3) WILD-TYPE"   "DEL PEAK 11(9P21.3) MUTATED" 
                   TCGA-FG-6691                    TCGA-FG-6692 
"DEL PEAK 11(9P21.3) WILD-TYPE"   "DEL PEAK 11(9P21.3) MUTATED" 
                   TCGA-FG-7634                    TCGA-FG-7636 
"DEL PEAK 11(9P21.3) WILD-TYPE"   "DEL PEAK 11(9P21.3) MUTATED" 
                   TCGA-FG-7638                    TCGA-FG-7643 
"DEL PEAK 11(9P21.3) WILD-TYPE" "DEL PEAK 11(9P21.3) WILD-TYPE" 
                   TCGA-FN-7833                    TCGA-HT-7467 
"DEL PEAK 11(9P21.3) WILD-TYPE" "DEL PEAK 11(9P21.3) WILD-TYPE" 
                   TCGA-HT-7468                    TCGA-HT-7470 
"DEL PEAK 11(9P21.3) WILD-TYPE"   "DEL PEAK 11(9P21.3) MUTATED" 
                   TCGA-HT-7472                    TCGA-HT-7473 
"DEL PEAK 11(9P21.3) WILD-TYPE" "DEL PEAK 11(9P21.3) WILD-TYPE" 
                   TCGA-HT-7474                    TCGA-HT-7475 
"DEL PEAK 11(9P21.3) WILD-TYPE"   "DEL PEAK 11(9P21.3) MUTATED" 
                   TCGA-HT-7476                    TCGA-HT-7478 
  "DEL PEAK 11(9P21.3) MUTATED" "DEL PEAK 11(9P21.3) WILD-TYPE" 
                   TCGA-HT-7479                    TCGA-HT-7480 
"DEL PEAK 11(9P21.3) WILD-TYPE" "DEL PEAK 11(9P21.3) WILD-TYPE" 
                   TCGA-HT-7481                    TCGA-HT-7482 
"DEL PEAK 11(9P21.3) WILD-TYPE" "DEL PEAK 11(9P21.3) WILD-TYPE" 
                   TCGA-HT-7483                    TCGA-HT-7485 
"DEL PEAK 11(9P21.3) WILD-TYPE" "DEL PEAK 11(9P21.3) WILD-TYPE" 
                   TCGA-HT-7601                    TCGA-HT-7602 
"DEL PEAK 11(9P21.3) WILD-TYPE" "DEL PEAK 11(9P21.3) WILD-TYPE" 
                   TCGA-HT-7603                    TCGA-HT-7604 
"DEL PEAK 11(9P21.3) WILD-TYPE" "DEL PEAK 11(9P21.3) WILD-TYPE" 
                   TCGA-HT-7605                    TCGA-HT-7606 
"DEL PEAK 11(9P21.3) WILD-TYPE"   "DEL PEAK 11(9P21.3) MUTATED" 
                   TCGA-HT-7607                    TCGA-HT-7608 
"DEL PEAK 11(9P21.3) WILD-TYPE" "DEL PEAK 11(9P21.3) WILD-TYPE" 
                   TCGA-HT-7609                    TCGA-HT-7610 
"DEL PEAK 11(9P21.3) WILD-TYPE" "DEL PEAK 11(9P21.3) WILD-TYPE" 
                   TCGA-HW-7486                    TCGA-HW-7487 
"DEL PEAK 11(9P21.3) WILD-TYPE" "DEL PEAK 11(9P21.3) WILD-TYPE" 
                   TCGA-HW-7489                    TCGA-HW-7490 
"DEL PEAK 11(9P21.3) WILD-TYPE"   "DEL PEAK 11(9P21.3) MUTATED" 
                   TCGA-HW-7491                    TCGA-HW-7493 
"DEL PEAK 11(9P21.3) WILD-TYPE" "DEL PEAK 11(9P21.3) WILD-TYPE" 
                   TCGA-HW-7495                    TCGA-IK-7675 
"DEL PEAK 11(9P21.3) WILD-TYPE"   "DEL PEAK 11(9P21.3) MUTATED" 
                   TCGA-IK-8125 
"DEL PEAK 11(9P21.3) WILD-TYPE" 
[1] "hr=" "3.3"
D25V2, continuous
D25V3, binary
[1] "tbl2"
                               cls
clus                            [,1] [,2]
  DEL PEAK 11(9P21.3) MUTATED     22   34
  DEL PEAK 11(9P21.3) WILD-TYPE   40   49
        clus
vv       DEL PEAK 11(9P21.3) MUTATED DEL PEAK 11(9P21.3) WILD-TYPE
  FEMALE                          22                            40
  MALE                            34                            49
D25V4, continuous
D25V5, multiclass
                   clus
vv                  DEL PEAK 11(9P21.3) MUTATED DEL PEAK 11(9P21.3) WILD-TYPE
  ASTROCYTOMA                                22                            28
  OLIGOASTROCYTOMA                           15                            21
  OLIGODENDROGLIOMA                          18                            40
D25V6, binary
[1] "tbl2"
                               cls
clus                            [,1] [,2]
  DEL PEAK 11(9P21.3) MUTATED     11   45
  DEL PEAK 11(9P21.3) WILD-TYPE   48   41
     clus
vv    DEL PEAK 11(9P21.3) MUTATED DEL PEAK 11(9P21.3) WILD-TYPE
  NO                           45                            41
  YES                          11                            48
D25V7, binary
[1] "tbl2"
                               cls
clus                            [,1] [,2]
  DEL PEAK 11(9P21.3) MUTATED     25   31
  DEL PEAK 11(9P21.3) WILD-TYPE   49   40
     clus
vv    DEL PEAK 11(9P21.3) MUTATED DEL PEAK 11(9P21.3) WILD-TYPE
  NO                           31                            40
  YES                          25                            49

Clustering(26) Variable = Del Peak 12(10q26.13) mutation analysis
D26V1, survival
                     TCGA-CS-4938                      TCGA-CS-4941 
"DEL PEAK 12(10Q26.13) WILD-TYPE"   "DEL PEAK 12(10Q26.13) MUTATED" 
                     TCGA-CS-4942                      TCGA-CS-4943 
"DEL PEAK 12(10Q26.13) WILD-TYPE" "DEL PEAK 12(10Q26.13) WILD-TYPE" 
                     TCGA-CS-4944                      TCGA-CS-5390 
"DEL PEAK 12(10Q26.13) WILD-TYPE" "DEL PEAK 12(10Q26.13) WILD-TYPE" 
                     TCGA-CS-5393                      TCGA-CS-5394 
"DEL PEAK 12(10Q26.13) WILD-TYPE" "DEL PEAK 12(10Q26.13) WILD-TYPE" 
                     TCGA-CS-5395                      TCGA-CS-5396 
  "DEL PEAK 12(10Q26.13) MUTATED" "DEL PEAK 12(10Q26.13) WILD-TYPE" 
                     TCGA-CS-5397                      TCGA-CS-6186 
  "DEL PEAK 12(10Q26.13) MUTATED"   "DEL PEAK 12(10Q26.13) MUTATED" 
                     TCGA-CS-6188                      TCGA-CS-6290 
  "DEL PEAK 12(10Q26.13) MUTATED" "DEL PEAK 12(10Q26.13) WILD-TYPE" 
                     TCGA-CS-6665                      TCGA-CS-6666 
  "DEL PEAK 12(10Q26.13) MUTATED" "DEL PEAK 12(10Q26.13) WILD-TYPE" 
                     TCGA-CS-6667                      TCGA-CS-6668 
"DEL PEAK 12(10Q26.13) WILD-TYPE" "DEL PEAK 12(10Q26.13) WILD-TYPE" 
                     TCGA-CS-6669                      TCGA-CS-6670 
"DEL PEAK 12(10Q26.13) WILD-TYPE" "DEL PEAK 12(10Q26.13) WILD-TYPE" 
                     TCGA-DB-5270                      TCGA-DB-5273 
"DEL PEAK 12(10Q26.13) WILD-TYPE" "DEL PEAK 12(10Q26.13) WILD-TYPE" 
                     TCGA-DB-5274                      TCGA-DB-5275 
"DEL PEAK 12(10Q26.13) WILD-TYPE" "DEL PEAK 12(10Q26.13) WILD-TYPE" 
                     TCGA-DB-5276                      TCGA-DB-5277 
"DEL PEAK 12(10Q26.13) WILD-TYPE"   "DEL PEAK 12(10Q26.13) MUTATED" 
                     TCGA-DB-5278                      TCGA-DB-5279 
"DEL PEAK 12(10Q26.13) WILD-TYPE"   "DEL PEAK 12(10Q26.13) MUTATED" 
                     TCGA-DB-5280                      TCGA-DB-5281 
"DEL PEAK 12(10Q26.13) WILD-TYPE" "DEL PEAK 12(10Q26.13) WILD-TYPE" 
                     TCGA-DH-5140                      TCGA-DH-5141 
  "DEL PEAK 12(10Q26.13) MUTATED" "DEL PEAK 12(10Q26.13) WILD-TYPE" 
                     TCGA-DH-5142                      TCGA-DH-5143 
"DEL PEAK 12(10Q26.13) WILD-TYPE" "DEL PEAK 12(10Q26.13) WILD-TYPE" 
                     TCGA-DH-5144                      TCGA-DU-5847 
"DEL PEAK 12(10Q26.13) WILD-TYPE"   "DEL PEAK 12(10Q26.13) MUTATED" 
                     TCGA-DU-5849                      TCGA-DU-5851 
"DEL PEAK 12(10Q26.13) WILD-TYPE" "DEL PEAK 12(10Q26.13) WILD-TYPE" 
                     TCGA-DU-5852                      TCGA-DU-5853 
  "DEL PEAK 12(10Q26.13) MUTATED"   "DEL PEAK 12(10Q26.13) MUTATED" 
                     TCGA-DU-5854                      TCGA-DU-5855 
  "DEL PEAK 12(10Q26.13) MUTATED" "DEL PEAK 12(10Q26.13) WILD-TYPE" 
                     TCGA-DU-5870                      TCGA-DU-5871 
"DEL PEAK 12(10Q26.13) WILD-TYPE" "DEL PEAK 12(10Q26.13) WILD-TYPE" 
                     TCGA-DU-5872                      TCGA-DU-5874 
  "DEL PEAK 12(10Q26.13) MUTATED" "DEL PEAK 12(10Q26.13) WILD-TYPE" 
                     TCGA-DU-6392                      TCGA-DU-6393 
"DEL PEAK 12(10Q26.13) WILD-TYPE" "DEL PEAK 12(10Q26.13) WILD-TYPE" 
                     TCGA-DU-6394                      TCGA-DU-6395 
"DEL PEAK 12(10Q26.13) WILD-TYPE" "DEL PEAK 12(10Q26.13) WILD-TYPE" 
                     TCGA-DU-6396                      TCGA-DU-6397 
  "DEL PEAK 12(10Q26.13) MUTATED" "DEL PEAK 12(10Q26.13) WILD-TYPE" 
                     TCGA-DU-6399                      TCGA-DU-6400 
  "DEL PEAK 12(10Q26.13) MUTATED" "DEL PEAK 12(10Q26.13) WILD-TYPE" 
                     TCGA-DU-6401                      TCGA-DU-6402 
  "DEL PEAK 12(10Q26.13) MUTATED"   "DEL PEAK 12(10Q26.13) MUTATED" 
                     TCGA-DU-6403                      TCGA-DU-6404 
  "DEL PEAK 12(10Q26.13) MUTATED" "DEL PEAK 12(10Q26.13) WILD-TYPE" 
                     TCGA-DU-6405                      TCGA-DU-6406 
  "DEL PEAK 12(10Q26.13) MUTATED"   "DEL PEAK 12(10Q26.13) MUTATED" 
                     TCGA-DU-6407                      TCGA-DU-6408 
  "DEL PEAK 12(10Q26.13) MUTATED"   "DEL PEAK 12(10Q26.13) MUTATED" 
                     TCGA-DU-6410                      TCGA-DU-6542 
"DEL PEAK 12(10Q26.13) WILD-TYPE" "DEL PEAK 12(10Q26.13) WILD-TYPE" 
                     TCGA-DU-7006                      TCGA-DU-7007 
  "DEL PEAK 12(10Q26.13) MUTATED"   "DEL PEAK 12(10Q26.13) MUTATED" 
                     TCGA-DU-7008                      TCGA-DU-7009 
  "DEL PEAK 12(10Q26.13) MUTATED" "DEL PEAK 12(10Q26.13) WILD-TYPE" 
                     TCGA-DU-7010                      TCGA-DU-7011 
  "DEL PEAK 12(10Q26.13) MUTATED" "DEL PEAK 12(10Q26.13) WILD-TYPE" 
                     TCGA-DU-7012                      TCGA-DU-7013 
  "DEL PEAK 12(10Q26.13) MUTATED"   "DEL PEAK 12(10Q26.13) MUTATED" 
                     TCGA-DU-7014                      TCGA-DU-7015 
  "DEL PEAK 12(10Q26.13) MUTATED" "DEL PEAK 12(10Q26.13) WILD-TYPE" 
                     TCGA-DU-7018                      TCGA-DU-7019 
"DEL PEAK 12(10Q26.13) WILD-TYPE" "DEL PEAK 12(10Q26.13) WILD-TYPE" 
                     TCGA-DU-7290                      TCGA-DU-7292 
  "DEL PEAK 12(10Q26.13) MUTATED"   "DEL PEAK 12(10Q26.13) MUTATED" 
                     TCGA-DU-7294                      TCGA-DU-7298 
"DEL PEAK 12(10Q26.13) WILD-TYPE"   "DEL PEAK 12(10Q26.13) MUTATED" 
                     TCGA-DU-7299                      TCGA-DU-7300 
"DEL PEAK 12(10Q26.13) WILD-TYPE" "DEL PEAK 12(10Q26.13) WILD-TYPE" 
                     TCGA-DU-7301                      TCGA-DU-7302 
  "DEL PEAK 12(10Q26.13) MUTATED" "DEL PEAK 12(10Q26.13) WILD-TYPE" 
                     TCGA-DU-7304                      TCGA-DU-7306 
"DEL PEAK 12(10Q26.13) WILD-TYPE" "DEL PEAK 12(10Q26.13) WILD-TYPE" 
                     TCGA-DU-7309                      TCGA-E1-5302 
"DEL PEAK 12(10Q26.13) WILD-TYPE" "DEL PEAK 12(10Q26.13) WILD-TYPE" 
                     TCGA-E1-5303                      TCGA-E1-5304 
"DEL PEAK 12(10Q26.13) WILD-TYPE"   "DEL PEAK 12(10Q26.13) MUTATED" 
                     TCGA-E1-5305                      TCGA-E1-5307 
"DEL PEAK 12(10Q26.13) WILD-TYPE" "DEL PEAK 12(10Q26.13) WILD-TYPE" 
                     TCGA-E1-5311                      TCGA-E1-5318 
  "DEL PEAK 12(10Q26.13) MUTATED" "DEL PEAK 12(10Q26.13) WILD-TYPE" 
                     TCGA-E1-5319                      TCGA-E1-5322 
"DEL PEAK 12(10Q26.13) WILD-TYPE" "DEL PEAK 12(10Q26.13) WILD-TYPE" 
                     TCGA-EZ-7264                      TCGA-FG-5962 
"DEL PEAK 12(10Q26.13) WILD-TYPE" "DEL PEAK 12(10Q26.13) WILD-TYPE" 
                     TCGA-FG-5963                      TCGA-FG-5964 
"DEL PEAK 12(10Q26.13) WILD-TYPE" "DEL PEAK 12(10Q26.13) WILD-TYPE" 
                     TCGA-FG-5965                      TCGA-FG-6688 
"DEL PEAK 12(10Q26.13) WILD-TYPE"   "DEL PEAK 12(10Q26.13) MUTATED" 
                     TCGA-FG-6689                      TCGA-FG-6690 
"DEL PEAK 12(10Q26.13) WILD-TYPE" "DEL PEAK 12(10Q26.13) WILD-TYPE" 
                     TCGA-FG-6691                      TCGA-FG-6692 
"DEL PEAK 12(10Q26.13) WILD-TYPE"   "DEL PEAK 12(10Q26.13) MUTATED" 
                     TCGA-FG-7634                      TCGA-FG-7636 
"DEL PEAK 12(10Q26.13) WILD-TYPE" "DEL PEAK 12(10Q26.13) WILD-TYPE" 
                     TCGA-FG-7638                      TCGA-FG-7643 
"DEL PEAK 12(10Q26.13) WILD-TYPE"   "DEL PEAK 12(10Q26.13) MUTATED" 
                     TCGA-FN-7833                      TCGA-HT-7467 
"DEL PEAK 12(10Q26.13) WILD-TYPE" "DEL PEAK 12(10Q26.13) WILD-TYPE" 
                     TCGA-HT-7468                      TCGA-HT-7470 
"DEL PEAK 12(10Q26.13) WILD-TYPE" "DEL PEAK 12(10Q26.13) WILD-TYPE" 
                     TCGA-HT-7472                      TCGA-HT-7473 
"DEL PEAK 12(10Q26.13) WILD-TYPE"   "DEL PEAK 12(10Q26.13) MUTATED" 
                     TCGA-HT-7474                      TCGA-HT-7475 
"DEL PEAK 12(10Q26.13) WILD-TYPE" "DEL PEAK 12(10Q26.13) WILD-TYPE" 
                     TCGA-HT-7476                      TCGA-HT-7478 
  "DEL PEAK 12(10Q26.13) MUTATED" "DEL PEAK 12(10Q26.13) WILD-TYPE" 
                     TCGA-HT-7479                      TCGA-HT-7480 
"DEL PEAK 12(10Q26.13) WILD-TYPE" "DEL PEAK 12(10Q26.13) WILD-TYPE" 
                     TCGA-HT-7481                      TCGA-HT-7482 
"DEL PEAK 12(10Q26.13) WILD-TYPE" "DEL PEAK 12(10Q26.13) WILD-TYPE" 
                     TCGA-HT-7483                      TCGA-HT-7485 
  "DEL PEAK 12(10Q26.13) MUTATED"   "DEL PEAK 12(10Q26.13) MUTATED" 
                     TCGA-HT-7601                      TCGA-HT-7602 
"DEL PEAK 12(10Q26.13) WILD-TYPE" "DEL PEAK 12(10Q26.13) WILD-TYPE" 
                     TCGA-HT-7603                      TCGA-HT-7604 
"DEL PEAK 12(10Q26.13) WILD-TYPE" "DEL PEAK 12(10Q26.13) WILD-TYPE" 
                     TCGA-HT-7605                      TCGA-HT-7606 
"DEL PEAK 12(10Q26.13) WILD-TYPE"   "DEL PEAK 12(10Q26.13) MUTATED" 
                     TCGA-HT-7607                      TCGA-HT-7608 
"DEL PEAK 12(10Q26.13) WILD-TYPE" "DEL PEAK 12(10Q26.13) WILD-TYPE" 
                     TCGA-HT-7609                      TCGA-HT-7610 
"DEL PEAK 12(10Q26.13) WILD-TYPE" "DEL PEAK 12(10Q26.13) WILD-TYPE" 
                     TCGA-HW-7486                      TCGA-HW-7487 
"DEL PEAK 12(10Q26.13) WILD-TYPE" "DEL PEAK 12(10Q26.13) WILD-TYPE" 
                     TCGA-HW-7489                      TCGA-HW-7490 
"DEL PEAK 12(10Q26.13) WILD-TYPE" "DEL PEAK 12(10Q26.13) WILD-TYPE" 
                     TCGA-HW-7491                      TCGA-HW-7493 
"DEL PEAK 12(10Q26.13) WILD-TYPE" "DEL PEAK 12(10Q26.13) WILD-TYPE" 
                     TCGA-HW-7495                      TCGA-IK-7675 
"DEL PEAK 12(10Q26.13) WILD-TYPE"   "DEL PEAK 12(10Q26.13) MUTATED" 
                     TCGA-IK-8125 
"DEL PEAK 12(10Q26.13) WILD-TYPE" 
                     TCGA-CS-4938                      TCGA-CS-4941 
"DEL PEAK 12(10Q26.13) WILD-TYPE"   "DEL PEAK 12(10Q26.13) MUTATED" 
                     TCGA-CS-4942                      TCGA-CS-4943 
"DEL PEAK 12(10Q26.13) WILD-TYPE" "DEL PEAK 12(10Q26.13) WILD-TYPE" 
                     TCGA-CS-4944                      TCGA-CS-5390 
"DEL PEAK 12(10Q26.13) WILD-TYPE" "DEL PEAK 12(10Q26.13) WILD-TYPE" 
                     TCGA-CS-5393                      TCGA-CS-5394 
"DEL PEAK 12(10Q26.13) WILD-TYPE" "DEL PEAK 12(10Q26.13) WILD-TYPE" 
                     TCGA-CS-5395                      TCGA-CS-5396 
  "DEL PEAK 12(10Q26.13) MUTATED" "DEL PEAK 12(10Q26.13) WILD-TYPE" 
                     TCGA-CS-5397                      TCGA-CS-6186 
  "DEL PEAK 12(10Q26.13) MUTATED"   "DEL PEAK 12(10Q26.13) MUTATED" 
                     TCGA-CS-6188                      TCGA-CS-6290 
  "DEL PEAK 12(10Q26.13) MUTATED" "DEL PEAK 12(10Q26.13) WILD-TYPE" 
                     TCGA-CS-6665                      TCGA-CS-6666 
  "DEL PEAK 12(10Q26.13) MUTATED" "DEL PEAK 12(10Q26.13) WILD-TYPE" 
                     TCGA-CS-6667                      TCGA-CS-6668 
"DEL PEAK 12(10Q26.13) WILD-TYPE" "DEL PEAK 12(10Q26.13) WILD-TYPE" 
                     TCGA-CS-6669                      TCGA-CS-6670 
"DEL PEAK 12(10Q26.13) WILD-TYPE" "DEL PEAK 12(10Q26.13) WILD-TYPE" 
                     TCGA-DB-5270                      TCGA-DB-5273 
"DEL PEAK 12(10Q26.13) WILD-TYPE" "DEL PEAK 12(10Q26.13) WILD-TYPE" 
                     TCGA-DB-5274                      TCGA-DB-5275 
"DEL PEAK 12(10Q26.13) WILD-TYPE" "DEL PEAK 12(10Q26.13) WILD-TYPE" 
                     TCGA-DB-5276                      TCGA-DB-5277 
"DEL PEAK 12(10Q26.13) WILD-TYPE"   "DEL PEAK 12(10Q26.13) MUTATED" 
                     TCGA-DB-5278                      TCGA-DB-5279 
"DEL PEAK 12(10Q26.13) WILD-TYPE"   "DEL PEAK 12(10Q26.13) MUTATED" 
                     TCGA-DB-5280                      TCGA-DB-5281 
"DEL PEAK 12(10Q26.13) WILD-TYPE" "DEL PEAK 12(10Q26.13) WILD-TYPE" 
                     TCGA-DH-5140                      TCGA-DH-5141 
  "DEL PEAK 12(10Q26.13) MUTATED" "DEL PEAK 12(10Q26.13) WILD-TYPE" 
                     TCGA-DH-5142                      TCGA-DH-5143 
"DEL PEAK 12(10Q26.13) WILD-TYPE" "DEL PEAK 12(10Q26.13) WILD-TYPE" 
                     TCGA-DH-5144                      TCGA-DU-5847 
"DEL PEAK 12(10Q26.13) WILD-TYPE"   "DEL PEAK 12(10Q26.13) MUTATED" 
                     TCGA-DU-5849                      TCGA-DU-5851 
"DEL PEAK 12(10Q26.13) WILD-TYPE" "DEL PEAK 12(10Q26.13) WILD-TYPE" 
                     TCGA-DU-5852                      TCGA-DU-5853 
  "DEL PEAK 12(10Q26.13) MUTATED"   "DEL PEAK 12(10Q26.13) MUTATED" 
                     TCGA-DU-5854                      TCGA-DU-5855 
  "DEL PEAK 12(10Q26.13) MUTATED" "DEL PEAK 12(10Q26.13) WILD-TYPE" 
                     TCGA-DU-5870                      TCGA-DU-5871 
"DEL PEAK 12(10Q26.13) WILD-TYPE" "DEL PEAK 12(10Q26.13) WILD-TYPE" 
                     TCGA-DU-5872                      TCGA-DU-5874 
  "DEL PEAK 12(10Q26.13) MUTATED" "DEL PEAK 12(10Q26.13) WILD-TYPE" 
                     TCGA-DU-6392                      TCGA-DU-6393 
"DEL PEAK 12(10Q26.13) WILD-TYPE" "DEL PEAK 12(10Q26.13) WILD-TYPE" 
                     TCGA-DU-6394                      TCGA-DU-6395 
"DEL PEAK 12(10Q26.13) WILD-TYPE" "DEL PEAK 12(10Q26.13) WILD-TYPE" 
                     TCGA-DU-6396                      TCGA-DU-6397 
  "DEL PEAK 12(10Q26.13) MUTATED" "DEL PEAK 12(10Q26.13) WILD-TYPE" 
                     TCGA-DU-6399                      TCGA-DU-6400 
  "DEL PEAK 12(10Q26.13) MUTATED" "DEL PEAK 12(10Q26.13) WILD-TYPE" 
                     TCGA-DU-6401                      TCGA-DU-6402 
  "DEL PEAK 12(10Q26.13) MUTATED"   "DEL PEAK 12(10Q26.13) MUTATED" 
                     TCGA-DU-6403                      TCGA-DU-6404 
  "DEL PEAK 12(10Q26.13) MUTATED" "DEL PEAK 12(10Q26.13) WILD-TYPE" 
                     TCGA-DU-6405                      TCGA-DU-6406 
  "DEL PEAK 12(10Q26.13) MUTATED"   "DEL PEAK 12(10Q26.13) MUTATED" 
                     TCGA-DU-6407                      TCGA-DU-6408 
  "DEL PEAK 12(10Q26.13) MUTATED"   "DEL PEAK 12(10Q26.13) MUTATED" 
                     TCGA-DU-6410                      TCGA-DU-6542 
"DEL PEAK 12(10Q26.13) WILD-TYPE" "DEL PEAK 12(10Q26.13) WILD-TYPE" 
                     TCGA-DU-7006                      TCGA-DU-7007 
  "DEL PEAK 12(10Q26.13) MUTATED"   "DEL PEAK 12(10Q26.13) MUTATED" 
                     TCGA-DU-7008                      TCGA-DU-7009 
  "DEL PEAK 12(10Q26.13) MUTATED" "DEL PEAK 12(10Q26.13) WILD-TYPE" 
                     TCGA-DU-7010                      TCGA-DU-7011 
  "DEL PEAK 12(10Q26.13) MUTATED" "DEL PEAK 12(10Q26.13) WILD-TYPE" 
                     TCGA-DU-7012                      TCGA-DU-7013 
  "DEL PEAK 12(10Q26.13) MUTATED"   "DEL PEAK 12(10Q26.13) MUTATED" 
                     TCGA-DU-7014                      TCGA-DU-7015 
  "DEL PEAK 12(10Q26.13) MUTATED" "DEL PEAK 12(10Q26.13) WILD-TYPE" 
                     TCGA-DU-7018                      TCGA-DU-7019 
"DEL PEAK 12(10Q26.13) WILD-TYPE" "DEL PEAK 12(10Q26.13) WILD-TYPE" 
                     TCGA-DU-7290                      TCGA-DU-7292 
  "DEL PEAK 12(10Q26.13) MUTATED"   "DEL PEAK 12(10Q26.13) MUTATED" 
                     TCGA-DU-7294                      TCGA-DU-7298 
"DEL PEAK 12(10Q26.13) WILD-TYPE"   "DEL PEAK 12(10Q26.13) MUTATED" 
                     TCGA-DU-7299                      TCGA-DU-7300 
"DEL PEAK 12(10Q26.13) WILD-TYPE" "DEL PEAK 12(10Q26.13) WILD-TYPE" 
                     TCGA-DU-7301                      TCGA-DU-7302 
  "DEL PEAK 12(10Q26.13) MUTATED" "DEL PEAK 12(10Q26.13) WILD-TYPE" 
                     TCGA-DU-7304                      TCGA-DU-7306 
"DEL PEAK 12(10Q26.13) WILD-TYPE" "DEL PEAK 12(10Q26.13) WILD-TYPE" 
                     TCGA-DU-7309                      TCGA-E1-5302 
"DEL PEAK 12(10Q26.13) WILD-TYPE" "DEL PEAK 12(10Q26.13) WILD-TYPE" 
                     TCGA-E1-5303                      TCGA-E1-5304 
"DEL PEAK 12(10Q26.13) WILD-TYPE"   "DEL PEAK 12(10Q26.13) MUTATED" 
                     TCGA-E1-5305                      TCGA-E1-5307 
"DEL PEAK 12(10Q26.13) WILD-TYPE" "DEL PEAK 12(10Q26.13) WILD-TYPE" 
                     TCGA-E1-5311                      TCGA-E1-5318 
  "DEL PEAK 12(10Q26.13) MUTATED" "DEL PEAK 12(10Q26.13) WILD-TYPE" 
                     TCGA-E1-5319                      TCGA-E1-5322 
"DEL PEAK 12(10Q26.13) WILD-TYPE" "DEL PEAK 12(10Q26.13) WILD-TYPE" 
                     TCGA-EZ-7264                      TCGA-FG-5962 
"DEL PEAK 12(10Q26.13) WILD-TYPE" "DEL PEAK 12(10Q26.13) WILD-TYPE" 
                     TCGA-FG-5963                      TCGA-FG-5964 
"DEL PEAK 12(10Q26.13) WILD-TYPE" "DEL PEAK 12(10Q26.13) WILD-TYPE" 
                     TCGA-FG-5965                      TCGA-FG-6688 
"DEL PEAK 12(10Q26.13) WILD-TYPE"   "DEL PEAK 12(10Q26.13) MUTATED" 
                     TCGA-FG-6689                      TCGA-FG-6690 
"DEL PEAK 12(10Q26.13) WILD-TYPE" "DEL PEAK 12(10Q26.13) WILD-TYPE" 
                     TCGA-FG-6691                      TCGA-FG-6692 
"DEL PEAK 12(10Q26.13) WILD-TYPE"   "DEL PEAK 12(10Q26.13) MUTATED" 
                     TCGA-FG-7634                      TCGA-FG-7636 
"DEL PEAK 12(10Q26.13) WILD-TYPE" "DEL PEAK 12(10Q26.13) WILD-TYPE" 
                     TCGA-FG-7638                      TCGA-FG-7643 
"DEL PEAK 12(10Q26.13) WILD-TYPE"   "DEL PEAK 12(10Q26.13) MUTATED" 
                     TCGA-FN-7833                      TCGA-HT-7467 
"DEL PEAK 12(10Q26.13) WILD-TYPE" "DEL PEAK 12(10Q26.13) WILD-TYPE" 
                     TCGA-HT-7468                      TCGA-HT-7470 
"DEL PEAK 12(10Q26.13) WILD-TYPE" "DEL PEAK 12(10Q26.13) WILD-TYPE" 
                     TCGA-HT-7472                      TCGA-HT-7473 
"DEL PEAK 12(10Q26.13) WILD-TYPE"   "DEL PEAK 12(10Q26.13) MUTATED" 
                     TCGA-HT-7474                      TCGA-HT-7475 
"DEL PEAK 12(10Q26.13) WILD-TYPE" "DEL PEAK 12(10Q26.13) WILD-TYPE" 
                     TCGA-HT-7476                      TCGA-HT-7478 
  "DEL PEAK 12(10Q26.13) MUTATED" "DEL PEAK 12(10Q26.13) WILD-TYPE" 
                     TCGA-HT-7479                      TCGA-HT-7480 
"DEL PEAK 12(10Q26.13) WILD-TYPE" "DEL PEAK 12(10Q26.13) WILD-TYPE" 
                     TCGA-HT-7481                      TCGA-HT-7482 
"DEL PEAK 12(10Q26.13) WILD-TYPE" "DEL PEAK 12(10Q26.13) WILD-TYPE" 
                     TCGA-HT-7483                      TCGA-HT-7485 
  "DEL PEAK 12(10Q26.13) MUTATED"   "DEL PEAK 12(10Q26.13) MUTATED" 
                     TCGA-HT-7601                      TCGA-HT-7602 
"DEL PEAK 12(10Q26.13) WILD-TYPE" "DEL PEAK 12(10Q26.13) WILD-TYPE" 
                     TCGA-HT-7603                      TCGA-HT-7604 
"DEL PEAK 12(10Q26.13) WILD-TYPE" "DEL PEAK 12(10Q26.13) WILD-TYPE" 
                     TCGA-HT-7605                      TCGA-HT-7606 
"DEL PEAK 12(10Q26.13) WILD-TYPE"   "DEL PEAK 12(10Q26.13) MUTATED" 
                     TCGA-HT-7607                      TCGA-HT-7608 
"DEL PEAK 12(10Q26.13) WILD-TYPE" "DEL PEAK 12(10Q26.13) WILD-TYPE" 
                     TCGA-HT-7609                      TCGA-HT-7610 
"DEL PEAK 12(10Q26.13) WILD-TYPE" "DEL PEAK 12(10Q26.13) WILD-TYPE" 
                     TCGA-HW-7486                      TCGA-HW-7487 
"DEL PEAK 12(10Q26.13) WILD-TYPE" "DEL PEAK 12(10Q26.13) WILD-TYPE" 
                     TCGA-HW-7489                      TCGA-HW-7490 
"DEL PEAK 12(10Q26.13) WILD-TYPE" "DEL PEAK 12(10Q26.13) WILD-TYPE" 
                     TCGA-HW-7491                      TCGA-HW-7493 
"DEL PEAK 12(10Q26.13) WILD-TYPE" "DEL PEAK 12(10Q26.13) WILD-TYPE" 
                     TCGA-HW-7495                      TCGA-IK-7675 
"DEL PEAK 12(10Q26.13) WILD-TYPE"   "DEL PEAK 12(10Q26.13) MUTATED" 
                     TCGA-IK-8125 
"DEL PEAK 12(10Q26.13) WILD-TYPE" 
                     TCGA-CS-4938                      TCGA-CS-4941 
"DEL PEAK 12(10Q26.13) WILD-TYPE"   "DEL PEAK 12(10Q26.13) MUTATED" 
                     TCGA-CS-4942                      TCGA-CS-4943 
"DEL PEAK 12(10Q26.13) WILD-TYPE" "DEL PEAK 12(10Q26.13) WILD-TYPE" 
                     TCGA-CS-4944                      TCGA-CS-5390 
"DEL PEAK 12(10Q26.13) WILD-TYPE" "DEL PEAK 12(10Q26.13) WILD-TYPE" 
                     TCGA-CS-5393                      TCGA-CS-5394 
"DEL PEAK 12(10Q26.13) WILD-TYPE" "DEL PEAK 12(10Q26.13) WILD-TYPE" 
                     TCGA-CS-5395                      TCGA-CS-5396 
  "DEL PEAK 12(10Q26.13) MUTATED" "DEL PEAK 12(10Q26.13) WILD-TYPE" 
                     TCGA-CS-5397                      TCGA-CS-6186 
  "DEL PEAK 12(10Q26.13) MUTATED"   "DEL PEAK 12(10Q26.13) MUTATED" 
                     TCGA-CS-6188                      TCGA-CS-6290 
  "DEL PEAK 12(10Q26.13) MUTATED" "DEL PEAK 12(10Q26.13) WILD-TYPE" 
                     TCGA-CS-6665                      TCGA-CS-6666 
  "DEL PEAK 12(10Q26.13) MUTATED" "DEL PEAK 12(10Q26.13) WILD-TYPE" 
                     TCGA-CS-6667                      TCGA-CS-6668 
"DEL PEAK 12(10Q26.13) WILD-TYPE" "DEL PEAK 12(10Q26.13) WILD-TYPE" 
                     TCGA-CS-6669                      TCGA-CS-6670 
"DEL PEAK 12(10Q26.13) WILD-TYPE" "DEL PEAK 12(10Q26.13) WILD-TYPE" 
                     TCGA-DB-5270                      TCGA-DB-5273 
"DEL PEAK 12(10Q26.13) WILD-TYPE" "DEL PEAK 12(10Q26.13) WILD-TYPE" 
                     TCGA-DB-5274                      TCGA-DB-5275 
"DEL PEAK 12(10Q26.13) WILD-TYPE" "DEL PEAK 12(10Q26.13) WILD-TYPE" 
                     TCGA-DB-5276                      TCGA-DB-5277 
"DEL PEAK 12(10Q26.13) WILD-TYPE"   "DEL PEAK 12(10Q26.13) MUTATED" 
                     TCGA-DB-5278                      TCGA-DB-5279 
"DEL PEAK 12(10Q26.13) WILD-TYPE"   "DEL PEAK 12(10Q26.13) MUTATED" 
                     TCGA-DB-5280                      TCGA-DB-5281 
"DEL PEAK 12(10Q26.13) WILD-TYPE" "DEL PEAK 12(10Q26.13) WILD-TYPE" 
                     TCGA-DH-5140                      TCGA-DH-5141 
  "DEL PEAK 12(10Q26.13) MUTATED" "DEL PEAK 12(10Q26.13) WILD-TYPE" 
                     TCGA-DH-5142                      TCGA-DH-5143 
"DEL PEAK 12(10Q26.13) WILD-TYPE" "DEL PEAK 12(10Q26.13) WILD-TYPE" 
                     TCGA-DH-5144                      TCGA-DU-5847 
"DEL PEAK 12(10Q26.13) WILD-TYPE"   "DEL PEAK 12(10Q26.13) MUTATED" 
                     TCGA-DU-5849                      TCGA-DU-5851 
"DEL PEAK 12(10Q26.13) WILD-TYPE" "DEL PEAK 12(10Q26.13) WILD-TYPE" 
                     TCGA-DU-5852                      TCGA-DU-5853 
  "DEL PEAK 12(10Q26.13) MUTATED"   "DEL PEAK 12(10Q26.13) MUTATED" 
                     TCGA-DU-5854                      TCGA-DU-5855 
  "DEL PEAK 12(10Q26.13) MUTATED" "DEL PEAK 12(10Q26.13) WILD-TYPE" 
                     TCGA-DU-5870                      TCGA-DU-5871 
"DEL PEAK 12(10Q26.13) WILD-TYPE" "DEL PEAK 12(10Q26.13) WILD-TYPE" 
                     TCGA-DU-5872                      TCGA-DU-5874 
  "DEL PEAK 12(10Q26.13) MUTATED" "DEL PEAK 12(10Q26.13) WILD-TYPE" 
                     TCGA-DU-6392                      TCGA-DU-6393 
"DEL PEAK 12(10Q26.13) WILD-TYPE" "DEL PEAK 12(10Q26.13) WILD-TYPE" 
                     TCGA-DU-6394                      TCGA-DU-6395 
"DEL PEAK 12(10Q26.13) WILD-TYPE" "DEL PEAK 12(10Q26.13) WILD-TYPE" 
                     TCGA-DU-6396                      TCGA-DU-6397 
  "DEL PEAK 12(10Q26.13) MUTATED" "DEL PEAK 12(10Q26.13) WILD-TYPE" 
                     TCGA-DU-6399                      TCGA-DU-6400 
  "DEL PEAK 12(10Q26.13) MUTATED" "DEL PEAK 12(10Q26.13) WILD-TYPE" 
                     TCGA-DU-6401                      TCGA-DU-6402 
  "DEL PEAK 12(10Q26.13) MUTATED"   "DEL PEAK 12(10Q26.13) MUTATED" 
                     TCGA-DU-6403                      TCGA-DU-6404 
  "DEL PEAK 12(10Q26.13) MUTATED" "DEL PEAK 12(10Q26.13) WILD-TYPE" 
                     TCGA-DU-6405                      TCGA-DU-6406 
  "DEL PEAK 12(10Q26.13) MUTATED"   "DEL PEAK 12(10Q26.13) MUTATED" 
                     TCGA-DU-6407                      TCGA-DU-6408 
  "DEL PEAK 12(10Q26.13) MUTATED"   "DEL PEAK 12(10Q26.13) MUTATED" 
                     TCGA-DU-6410                      TCGA-DU-6542 
"DEL PEAK 12(10Q26.13) WILD-TYPE" "DEL PEAK 12(10Q26.13) WILD-TYPE" 
                     TCGA-DU-7006                      TCGA-DU-7007 
  "DEL PEAK 12(10Q26.13) MUTATED"   "DEL PEAK 12(10Q26.13) MUTATED" 
                     TCGA-DU-7008                      TCGA-DU-7009 
  "DEL PEAK 12(10Q26.13) MUTATED" "DEL PEAK 12(10Q26.13) WILD-TYPE" 
                     TCGA-DU-7010                      TCGA-DU-7011 
  "DEL PEAK 12(10Q26.13) MUTATED" "DEL PEAK 12(10Q26.13) WILD-TYPE" 
                     TCGA-DU-7012                      TCGA-DU-7013 
  "DEL PEAK 12(10Q26.13) MUTATED"   "DEL PEAK 12(10Q26.13) MUTATED" 
                     TCGA-DU-7014                      TCGA-DU-7015 
  "DEL PEAK 12(10Q26.13) MUTATED" "DEL PEAK 12(10Q26.13) WILD-TYPE" 
                     TCGA-DU-7018                      TCGA-DU-7019 
"DEL PEAK 12(10Q26.13) WILD-TYPE" "DEL PEAK 12(10Q26.13) WILD-TYPE" 
                     TCGA-DU-7290                      TCGA-DU-7292 
  "DEL PEAK 12(10Q26.13) MUTATED"   "DEL PEAK 12(10Q26.13) MUTATED" 
                     TCGA-DU-7294                      TCGA-DU-7298 
"DEL PEAK 12(10Q26.13) WILD-TYPE"   "DEL PEAK 12(10Q26.13) MUTATED" 
                     TCGA-DU-7299                      TCGA-DU-7300 
"DEL PEAK 12(10Q26.13) WILD-TYPE" "DEL PEAK 12(10Q26.13) WILD-TYPE" 
                     TCGA-DU-7301                      TCGA-DU-7302 
  "DEL PEAK 12(10Q26.13) MUTATED" "DEL PEAK 12(10Q26.13) WILD-TYPE" 
                     TCGA-DU-7304                      TCGA-DU-7306 
"DEL PEAK 12(10Q26.13) WILD-TYPE" "DEL PEAK 12(10Q26.13) WILD-TYPE" 
                     TCGA-DU-7309                      TCGA-E1-5302 
"DEL PEAK 12(10Q26.13) WILD-TYPE" "DEL PEAK 12(10Q26.13) WILD-TYPE" 
                     TCGA-E1-5303                      TCGA-E1-5304 
"DEL PEAK 12(10Q26.13) WILD-TYPE"   "DEL PEAK 12(10Q26.13) MUTATED" 
                     TCGA-E1-5305                      TCGA-E1-5307 
"DEL PEAK 12(10Q26.13) WILD-TYPE" "DEL PEAK 12(10Q26.13) WILD-TYPE" 
                     TCGA-E1-5311                      TCGA-E1-5318 
  "DEL PEAK 12(10Q26.13) MUTATED" "DEL PEAK 12(10Q26.13) WILD-TYPE" 
                     TCGA-E1-5319                      TCGA-E1-5322 
"DEL PEAK 12(10Q26.13) WILD-TYPE" "DEL PEAK 12(10Q26.13) WILD-TYPE" 
                     TCGA-EZ-7264                      TCGA-FG-5962 
"DEL PEAK 12(10Q26.13) WILD-TYPE" "DEL PEAK 12(10Q26.13) WILD-TYPE" 
                     TCGA-FG-5963                      TCGA-FG-5964 
"DEL PEAK 12(10Q26.13) WILD-TYPE" "DEL PEAK 12(10Q26.13) WILD-TYPE" 
                     TCGA-FG-5965                      TCGA-FG-6688 
"DEL PEAK 12(10Q26.13) WILD-TYPE"   "DEL PEAK 12(10Q26.13) MUTATED" 
                     TCGA-FG-6689                      TCGA-FG-6690 
"DEL PEAK 12(10Q26.13) WILD-TYPE" "DEL PEAK 12(10Q26.13) WILD-TYPE" 
                     TCGA-FG-6691                      TCGA-FG-6692 
"DEL PEAK 12(10Q26.13) WILD-TYPE"   "DEL PEAK 12(10Q26.13) MUTATED" 
                     TCGA-FG-7634                      TCGA-FG-7636 
"DEL PEAK 12(10Q26.13) WILD-TYPE" "DEL PEAK 12(10Q26.13) WILD-TYPE" 
                     TCGA-FG-7638                      TCGA-FG-7643 
"DEL PEAK 12(10Q26.13) WILD-TYPE"   "DEL PEAK 12(10Q26.13) MUTATED" 
                     TCGA-FN-7833                      TCGA-HT-7467 
"DEL PEAK 12(10Q26.13) WILD-TYPE" "DEL PEAK 12(10Q26.13) WILD-TYPE" 
                     TCGA-HT-7468                      TCGA-HT-7470 
"DEL PEAK 12(10Q26.13) WILD-TYPE" "DEL PEAK 12(10Q26.13) WILD-TYPE" 
                     TCGA-HT-7472                      TCGA-HT-7473 
"DEL PEAK 12(10Q26.13) WILD-TYPE"   "DEL PEAK 12(10Q26.13) MUTATED" 
                     TCGA-HT-7474                      TCGA-HT-7475 
"DEL PEAK 12(10Q26.13) WILD-TYPE" "DEL PEAK 12(10Q26.13) WILD-TYPE" 
                     TCGA-HT-7476                      TCGA-HT-7478 
  "DEL PEAK 12(10Q26.13) MUTATED" "DEL PEAK 12(10Q26.13) WILD-TYPE" 
                     TCGA-HT-7479                      TCGA-HT-7480 
"DEL PEAK 12(10Q26.13) WILD-TYPE" "DEL PEAK 12(10Q26.13) WILD-TYPE" 
                     TCGA-HT-7481                      TCGA-HT-7482 
"DEL PEAK 12(10Q26.13) WILD-TYPE" "DEL PEAK 12(10Q26.13) WILD-TYPE" 
                     TCGA-HT-7483                      TCGA-HT-7485 
  "DEL PEAK 12(10Q26.13) MUTATED"   "DEL PEAK 12(10Q26.13) MUTATED" 
                     TCGA-HT-7601                      TCGA-HT-7602 
"DEL PEAK 12(10Q26.13) WILD-TYPE" "DEL PEAK 12(10Q26.13) WILD-TYPE" 
                     TCGA-HT-7603                      TCGA-HT-7604 
"DEL PEAK 12(10Q26.13) WILD-TYPE" "DEL PEAK 12(10Q26.13) WILD-TYPE" 
                     TCGA-HT-7605                      TCGA-HT-7606 
"DEL PEAK 12(10Q26.13) WILD-TYPE"   "DEL PEAK 12(10Q26.13) MUTATED" 
                     TCGA-HT-7607                      TCGA-HT-7608 
"DEL PEAK 12(10Q26.13) WILD-TYPE" "DEL PEAK 12(10Q26.13) WILD-TYPE" 
                     TCGA-HT-7609                      TCGA-HT-7610 
"DEL PEAK 12(10Q26.13) WILD-TYPE" "DEL PEAK 12(10Q26.13) WILD-TYPE" 
                     TCGA-HW-7486                      TCGA-HW-7487 
"DEL PEAK 12(10Q26.13) WILD-TYPE" "DEL PEAK 12(10Q26.13) WILD-TYPE" 
                     TCGA-HW-7489                      TCGA-HW-7490 
"DEL PEAK 12(10Q26.13) WILD-TYPE" "DEL PEAK 12(10Q26.13) WILD-TYPE" 
                     TCGA-HW-7491                      TCGA-HW-7493 
"DEL PEAK 12(10Q26.13) WILD-TYPE" "DEL PEAK 12(10Q26.13) WILD-TYPE" 
                     TCGA-HW-7495                      TCGA-IK-7675 
"DEL PEAK 12(10Q26.13) WILD-TYPE"   "DEL PEAK 12(10Q26.13) MUTATED" 
                     TCGA-IK-8125 
"DEL PEAK 12(10Q26.13) WILD-TYPE" 
[1] "hr=" "2.9"
D26V2, continuous
D26V3, binary
[1] "tbl2"
                                 cls
clus                              [,1] [,2]
  DEL PEAK 12(10Q26.13) MUTATED     23   22
  DEL PEAK 12(10Q26.13) WILD-TYPE   39   61
        clus
vv       DEL PEAK 12(10Q26.13) MUTATED DEL PEAK 12(10Q26.13) WILD-TYPE
  FEMALE                            23                              39
  MALE                              22                              61
D26V4, continuous
D26V5, multiclass
                   clus
vv                  DEL PEAK 12(10Q26.13) MUTATED
  ASTROCYTOMA                                  22
  OLIGOASTROCYTOMA                             10
  OLIGODENDROGLIOMA                            13
                   clus
vv                  DEL PEAK 12(10Q26.13) WILD-TYPE
  ASTROCYTOMA                                    28
  OLIGOASTROCYTOMA                               26
  OLIGODENDROGLIOMA                              45
D26V6, binary
[1] "tbl2"
                                 cls
clus                              [,1] [,2]
  DEL PEAK 12(10Q26.13) MUTATED     15   30
  DEL PEAK 12(10Q26.13) WILD-TYPE   44   56
     clus
vv    DEL PEAK 12(10Q26.13) MUTATED DEL PEAK 12(10Q26.13) WILD-TYPE
  NO                             30                              56
  YES                            15                              44
D26V7, binary
[1] "tbl2"
                                 cls
clus                              [,1] [,2]
  DEL PEAK 12(10Q26.13) MUTATED     23   22
  DEL PEAK 12(10Q26.13) WILD-TYPE   51   49
     clus
vv    DEL PEAK 12(10Q26.13) MUTATED DEL PEAK 12(10Q26.13) WILD-TYPE
  NO                             22                              49
  YES                            23                              51

Clustering(27) Variable = Del Peak 13(11p15.5) mutation analysis
D27V1, survival
                    TCGA-CS-4938                     TCGA-CS-4941 
"DEL PEAK 13(11P15.5) WILD-TYPE" "DEL PEAK 13(11P15.5) WILD-TYPE" 
                    TCGA-CS-4942                     TCGA-CS-4943 
"DEL PEAK 13(11P15.5) WILD-TYPE"   "DEL PEAK 13(11P15.5) MUTATED" 
                    TCGA-CS-4944                     TCGA-CS-5390 
"DEL PEAK 13(11P15.5) WILD-TYPE" "DEL PEAK 13(11P15.5) WILD-TYPE" 
                    TCGA-CS-5393                     TCGA-CS-5394 
"DEL PEAK 13(11P15.5) WILD-TYPE" "DEL PEAK 13(11P15.5) WILD-TYPE" 
                    TCGA-CS-5395                     TCGA-CS-5396 
"DEL PEAK 13(11P15.5) WILD-TYPE" "DEL PEAK 13(11P15.5) WILD-TYPE" 
                    TCGA-CS-5397                     TCGA-CS-6186 
"DEL PEAK 13(11P15.5) WILD-TYPE" "DEL PEAK 13(11P15.5) WILD-TYPE" 
                    TCGA-CS-6188                     TCGA-CS-6290 
"DEL PEAK 13(11P15.5) WILD-TYPE"   "DEL PEAK 13(11P15.5) MUTATED" 
                    TCGA-CS-6665                     TCGA-CS-6666 
  "DEL PEAK 13(11P15.5) MUTATED" "DEL PEAK 13(11P15.5) WILD-TYPE" 
                    TCGA-CS-6667                     TCGA-CS-6668 
"DEL PEAK 13(11P15.5) WILD-TYPE" "DEL PEAK 13(11P15.5) WILD-TYPE" 
                    TCGA-CS-6669                     TCGA-CS-6670 
"DEL PEAK 13(11P15.5) WILD-TYPE" "DEL PEAK 13(11P15.5) WILD-TYPE" 
                    TCGA-DB-5270                     TCGA-DB-5273 
"DEL PEAK 13(11P15.5) WILD-TYPE" "DEL PEAK 13(11P15.5) WILD-TYPE" 
                    TCGA-DB-5274                     TCGA-DB-5275 
"DEL PEAK 13(11P15.5) WILD-TYPE"   "DEL PEAK 13(11P15.5) MUTATED" 
                    TCGA-DB-5276                     TCGA-DB-5277 
"DEL PEAK 13(11P15.5) WILD-TYPE"   "DEL PEAK 13(11P15.5) MUTATED" 
                    TCGA-DB-5278                     TCGA-DB-5279 
"DEL PEAK 13(11P15.5) WILD-TYPE" "DEL PEAK 13(11P15.5) WILD-TYPE" 
                    TCGA-DB-5280                     TCGA-DB-5281 
"DEL PEAK 13(11P15.5) WILD-TYPE" "DEL PEAK 13(11P15.5) WILD-TYPE" 
                    TCGA-DH-5140                     TCGA-DH-5141 
  "DEL PEAK 13(11P15.5) MUTATED" "DEL PEAK 13(11P15.5) WILD-TYPE" 
                    TCGA-DH-5142                     TCGA-DH-5143 
  "DEL PEAK 13(11P15.5) MUTATED" "DEL PEAK 13(11P15.5) WILD-TYPE" 
                    TCGA-DH-5144                     TCGA-DU-5847 
"DEL PEAK 13(11P15.5) WILD-TYPE" "DEL PEAK 13(11P15.5) WILD-TYPE" 
                    TCGA-DU-5849                     TCGA-DU-5851 
"DEL PEAK 13(11P15.5) WILD-TYPE"   "DEL PEAK 13(11P15.5) MUTATED" 
                    TCGA-DU-5852                     TCGA-DU-5853 
"DEL PEAK 13(11P15.5) WILD-TYPE"   "DEL PEAK 13(11P15.5) MUTATED" 
                    TCGA-DU-5854                     TCGA-DU-5855 
"DEL PEAK 13(11P15.5) WILD-TYPE" "DEL PEAK 13(11P15.5) WILD-TYPE" 
                    TCGA-DU-5870                     TCGA-DU-5871 
"DEL PEAK 13(11P15.5) WILD-TYPE" "DEL PEAK 13(11P15.5) WILD-TYPE" 
                    TCGA-DU-5872                     TCGA-DU-5874 
"DEL PEAK 13(11P15.5) WILD-TYPE" "DEL PEAK 13(11P15.5) WILD-TYPE" 
                    TCGA-DU-6392                     TCGA-DU-6393 
"DEL PEAK 13(11P15.5) WILD-TYPE" "DEL PEAK 13(11P15.5) WILD-TYPE" 
                    TCGA-DU-6394                     TCGA-DU-6395 
"DEL PEAK 13(11P15.5) WILD-TYPE" "DEL PEAK 13(11P15.5) WILD-TYPE" 
                    TCGA-DU-6396                     TCGA-DU-6397 
  "DEL PEAK 13(11P15.5) MUTATED" "DEL PEAK 13(11P15.5) WILD-TYPE" 
                    TCGA-DU-6399                     TCGA-DU-6400 
"DEL PEAK 13(11P15.5) WILD-TYPE" "DEL PEAK 13(11P15.5) WILD-TYPE" 
                    TCGA-DU-6401                     TCGA-DU-6402 
"DEL PEAK 13(11P15.5) WILD-TYPE" "DEL PEAK 13(11P15.5) WILD-TYPE" 
                    TCGA-DU-6403                     TCGA-DU-6404 
"DEL PEAK 13(11P15.5) WILD-TYPE" "DEL PEAK 13(11P15.5) WILD-TYPE" 
                    TCGA-DU-6405                     TCGA-DU-6406 
"DEL PEAK 13(11P15.5) WILD-TYPE" "DEL PEAK 13(11P15.5) WILD-TYPE" 
                    TCGA-DU-6407                     TCGA-DU-6408 
"DEL PEAK 13(11P15.5) WILD-TYPE"   "DEL PEAK 13(11P15.5) MUTATED" 
                    TCGA-DU-6410                     TCGA-DU-6542 
"DEL PEAK 13(11P15.5) WILD-TYPE" "DEL PEAK 13(11P15.5) WILD-TYPE" 
                    TCGA-DU-7006                     TCGA-DU-7007 
  "DEL PEAK 13(11P15.5) MUTATED"   "DEL PEAK 13(11P15.5) MUTATED" 
                    TCGA-DU-7008                     TCGA-DU-7009 
  "DEL PEAK 13(11P15.5) MUTATED" "DEL PEAK 13(11P15.5) WILD-TYPE" 
                    TCGA-DU-7010                     TCGA-DU-7011 
  "DEL PEAK 13(11P15.5) MUTATED" "DEL PEAK 13(11P15.5) WILD-TYPE" 
                    TCGA-DU-7012                     TCGA-DU-7013 
"DEL PEAK 13(11P15.5) WILD-TYPE" "DEL PEAK 13(11P15.5) WILD-TYPE" 
                    TCGA-DU-7014                     TCGA-DU-7015 
  "DEL PEAK 13(11P15.5) MUTATED"   "DEL PEAK 13(11P15.5) MUTATED" 
                    TCGA-DU-7018                     TCGA-DU-7019 
"DEL PEAK 13(11P15.5) WILD-TYPE" "DEL PEAK 13(11P15.5) WILD-TYPE" 
                    TCGA-DU-7290                     TCGA-DU-7292 
"DEL PEAK 13(11P15.5) WILD-TYPE" "DEL PEAK 13(11P15.5) WILD-TYPE" 
                    TCGA-DU-7294                     TCGA-DU-7298 
"DEL PEAK 13(11P15.5) WILD-TYPE"   "DEL PEAK 13(11P15.5) MUTATED" 
                    TCGA-DU-7299                     TCGA-DU-7300 
"DEL PEAK 13(11P15.5) WILD-TYPE" "DEL PEAK 13(11P15.5) WILD-TYPE" 
                    TCGA-DU-7301                     TCGA-DU-7302 
"DEL PEAK 13(11P15.5) WILD-TYPE" "DEL PEAK 13(11P15.5) WILD-TYPE" 
                    TCGA-DU-7304                     TCGA-DU-7306 
"DEL PEAK 13(11P15.5) WILD-TYPE" "DEL PEAK 13(11P15.5) WILD-TYPE" 
                    TCGA-DU-7309                     TCGA-E1-5302 
  "DEL PEAK 13(11P15.5) MUTATED"   "DEL PEAK 13(11P15.5) MUTATED" 
                    TCGA-E1-5303                     TCGA-E1-5304 
"DEL PEAK 13(11P15.5) WILD-TYPE"   "DEL PEAK 13(11P15.5) MUTATED" 
                    TCGA-E1-5305                     TCGA-E1-5307 
"DEL PEAK 13(11P15.5) WILD-TYPE" "DEL PEAK 13(11P15.5) WILD-TYPE" 
                    TCGA-E1-5311                     TCGA-E1-5318 
"DEL PEAK 13(11P15.5) WILD-TYPE" "DEL PEAK 13(11P15.5) WILD-TYPE" 
                    TCGA-E1-5319                     TCGA-E1-5322 
"DEL PEAK 13(11P15.5) WILD-TYPE" "DEL PEAK 13(11P15.5) WILD-TYPE" 
                    TCGA-EZ-7264                     TCGA-FG-5962 
"DEL PEAK 13(11P15.5) WILD-TYPE" "DEL PEAK 13(11P15.5) WILD-TYPE" 
                    TCGA-FG-5963                     TCGA-FG-5964 
"DEL PEAK 13(11P15.5) WILD-TYPE" "DEL PEAK 13(11P15.5) WILD-TYPE" 
                    TCGA-FG-5965                     TCGA-FG-6688 
  "DEL PEAK 13(11P15.5) MUTATED" "DEL PEAK 13(11P15.5) WILD-TYPE" 
                    TCGA-FG-6689                     TCGA-FG-6690 
  "DEL PEAK 13(11P15.5) MUTATED" "DEL PEAK 13(11P15.5) WILD-TYPE" 
                    TCGA-FG-6691                     TCGA-FG-6692 
"DEL PEAK 13(11P15.5) WILD-TYPE" "DEL PEAK 13(11P15.5) WILD-TYPE" 
                    TCGA-FG-7634                     TCGA-FG-7636 
"DEL PEAK 13(11P15.5) WILD-TYPE" "DEL PEAK 13(11P15.5) WILD-TYPE" 
                    TCGA-FG-7638                     TCGA-FG-7643 
"DEL PEAK 13(11P15.5) WILD-TYPE" "DEL PEAK 13(11P15.5) WILD-TYPE" 
                    TCGA-FN-7833                     TCGA-HT-7467 
"DEL PEAK 13(11P15.5) WILD-TYPE" "DEL PEAK 13(11P15.5) WILD-TYPE" 
                    TCGA-HT-7468                     TCGA-HT-7470 
"DEL PEAK 13(11P15.5) WILD-TYPE"   "DEL PEAK 13(11P15.5) MUTATED" 
                    TCGA-HT-7472                     TCGA-HT-7473 
"DEL PEAK 13(11P15.5) WILD-TYPE" "DEL PEAK 13(11P15.5) WILD-TYPE" 
                    TCGA-HT-7474                     TCGA-HT-7475 
"DEL PEAK 13(11P15.5) WILD-TYPE" "DEL PEAK 13(11P15.5) WILD-TYPE" 
                    TCGA-HT-7476                     TCGA-HT-7478 
"DEL PEAK 13(11P15.5) WILD-TYPE"   "DEL PEAK 13(11P15.5) MUTATED" 
                    TCGA-HT-7479                     TCGA-HT-7480 
"DEL PEAK 13(11P15.5) WILD-TYPE" "DEL PEAK 13(11P15.5) WILD-TYPE" 
                    TCGA-HT-7481                     TCGA-HT-7482 
"DEL PEAK 13(11P15.5) WILD-TYPE" "DEL PEAK 13(11P15.5) WILD-TYPE" 
                    TCGA-HT-7483                     TCGA-HT-7485 
"DEL PEAK 13(11P15.5) WILD-TYPE" "DEL PEAK 13(11P15.5) WILD-TYPE" 
                    TCGA-HT-7601                     TCGA-HT-7602 
  "DEL PEAK 13(11P15.5) MUTATED" "DEL PEAK 13(11P15.5) WILD-TYPE" 
                    TCGA-HT-7603                     TCGA-HT-7604 
  "DEL PEAK 13(11P15.5) MUTATED" "DEL PEAK 13(11P15.5) WILD-TYPE" 
                    TCGA-HT-7605                     TCGA-HT-7606 
"DEL PEAK 13(11P15.5) WILD-TYPE" "DEL PEAK 13(11P15.5) WILD-TYPE" 
                    TCGA-HT-7607                     TCGA-HT-7608 
  "DEL PEAK 13(11P15.5) MUTATED" "DEL PEAK 13(11P15.5) WILD-TYPE" 
                    TCGA-HT-7609                     TCGA-HT-7610 
"DEL PEAK 13(11P15.5) WILD-TYPE" "DEL PEAK 13(11P15.5) WILD-TYPE" 
                    TCGA-HW-7486                     TCGA-HW-7487 
"DEL PEAK 13(11P15.5) WILD-TYPE" "DEL PEAK 13(11P15.5) WILD-TYPE" 
                    TCGA-HW-7489                     TCGA-HW-7490 
"DEL PEAK 13(11P15.5) WILD-TYPE" "DEL PEAK 13(11P15.5) WILD-TYPE" 
                    TCGA-HW-7491                     TCGA-HW-7493 
"DEL PEAK 13(11P15.5) WILD-TYPE"   "DEL PEAK 13(11P15.5) MUTATED" 
                    TCGA-HW-7495                     TCGA-IK-7675 
"DEL PEAK 13(11P15.5) WILD-TYPE"   "DEL PEAK 13(11P15.5) MUTATED" 
                    TCGA-IK-8125 
"DEL PEAK 13(11P15.5) WILD-TYPE" 
                    TCGA-CS-4938                     TCGA-CS-4941 
"DEL PEAK 13(11P15.5) WILD-TYPE" "DEL PEAK 13(11P15.5) WILD-TYPE" 
                    TCGA-CS-4942                     TCGA-CS-4943 
"DEL PEAK 13(11P15.5) WILD-TYPE"   "DEL PEAK 13(11P15.5) MUTATED" 
                    TCGA-CS-4944                     TCGA-CS-5390 
"DEL PEAK 13(11P15.5) WILD-TYPE" "DEL PEAK 13(11P15.5) WILD-TYPE" 
                    TCGA-CS-5393                     TCGA-CS-5394 
"DEL PEAK 13(11P15.5) WILD-TYPE" "DEL PEAK 13(11P15.5) WILD-TYPE" 
                    TCGA-CS-5395                     TCGA-CS-5396 
"DEL PEAK 13(11P15.5) WILD-TYPE" "DEL PEAK 13(11P15.5) WILD-TYPE" 
                    TCGA-CS-5397                     TCGA-CS-6186 
"DEL PEAK 13(11P15.5) WILD-TYPE" "DEL PEAK 13(11P15.5) WILD-TYPE" 
                    TCGA-CS-6188                     TCGA-CS-6290 
"DEL PEAK 13(11P15.5) WILD-TYPE"   "DEL PEAK 13(11P15.5) MUTATED" 
                    TCGA-CS-6665                     TCGA-CS-6666 
  "DEL PEAK 13(11P15.5) MUTATED" "DEL PEAK 13(11P15.5) WILD-TYPE" 
                    TCGA-CS-6667                     TCGA-CS-6668 
"DEL PEAK 13(11P15.5) WILD-TYPE" "DEL PEAK 13(11P15.5) WILD-TYPE" 
                    TCGA-CS-6669                     TCGA-CS-6670 
"DEL PEAK 13(11P15.5) WILD-TYPE" "DEL PEAK 13(11P15.5) WILD-TYPE" 
                    TCGA-DB-5270                     TCGA-DB-5273 
"DEL PEAK 13(11P15.5) WILD-TYPE" "DEL PEAK 13(11P15.5) WILD-TYPE" 
                    TCGA-DB-5274                     TCGA-DB-5275 
"DEL PEAK 13(11P15.5) WILD-TYPE"   "DEL PEAK 13(11P15.5) MUTATED" 
                    TCGA-DB-5276                     TCGA-DB-5277 
"DEL PEAK 13(11P15.5) WILD-TYPE"   "DEL PEAK 13(11P15.5) MUTATED" 
                    TCGA-DB-5278                     TCGA-DB-5279 
"DEL PEAK 13(11P15.5) WILD-TYPE" "DEL PEAK 13(11P15.5) WILD-TYPE" 
                    TCGA-DB-5280                     TCGA-DB-5281 
"DEL PEAK 13(11P15.5) WILD-TYPE" "DEL PEAK 13(11P15.5) WILD-TYPE" 
                    TCGA-DH-5140                     TCGA-DH-5141 
  "DEL PEAK 13(11P15.5) MUTATED" "DEL PEAK 13(11P15.5) WILD-TYPE" 
                    TCGA-DH-5142                     TCGA-DH-5143 
  "DEL PEAK 13(11P15.5) MUTATED" "DEL PEAK 13(11P15.5) WILD-TYPE" 
                    TCGA-DH-5144                     TCGA-DU-5847 
"DEL PEAK 13(11P15.5) WILD-TYPE" "DEL PEAK 13(11P15.5) WILD-TYPE" 
                    TCGA-DU-5849                     TCGA-DU-5851 
"DEL PEAK 13(11P15.5) WILD-TYPE"   "DEL PEAK 13(11P15.5) MUTATED" 
                    TCGA-DU-5852                     TCGA-DU-5853 
"DEL PEAK 13(11P15.5) WILD-TYPE"   "DEL PEAK 13(11P15.5) MUTATED" 
                    TCGA-DU-5854                     TCGA-DU-5855 
"DEL PEAK 13(11P15.5) WILD-TYPE" "DEL PEAK 13(11P15.5) WILD-TYPE" 
                    TCGA-DU-5870                     TCGA-DU-5871 
"DEL PEAK 13(11P15.5) WILD-TYPE" "DEL PEAK 13(11P15.5) WILD-TYPE" 
                    TCGA-DU-5872                     TCGA-DU-5874 
"DEL PEAK 13(11P15.5) WILD-TYPE" "DEL PEAK 13(11P15.5) WILD-TYPE" 
                    TCGA-DU-6392                     TCGA-DU-6393 
"DEL PEAK 13(11P15.5) WILD-TYPE" "DEL PEAK 13(11P15.5) WILD-TYPE" 
                    TCGA-DU-6394                     TCGA-DU-6395 
"DEL PEAK 13(11P15.5) WILD-TYPE" "DEL PEAK 13(11P15.5) WILD-TYPE" 
                    TCGA-DU-6396                     TCGA-DU-6397 
  "DEL PEAK 13(11P15.5) MUTATED" "DEL PEAK 13(11P15.5) WILD-TYPE" 
                    TCGA-DU-6399                     TCGA-DU-6400 
"DEL PEAK 13(11P15.5) WILD-TYPE" "DEL PEAK 13(11P15.5) WILD-TYPE" 
                    TCGA-DU-6401                     TCGA-DU-6402 
"DEL PEAK 13(11P15.5) WILD-TYPE" "DEL PEAK 13(11P15.5) WILD-TYPE" 
                    TCGA-DU-6403                     TCGA-DU-6404 
"DEL PEAK 13(11P15.5) WILD-TYPE" "DEL PEAK 13(11P15.5) WILD-TYPE" 
                    TCGA-DU-6405                     TCGA-DU-6406 
"DEL PEAK 13(11P15.5) WILD-TYPE" "DEL PEAK 13(11P15.5) WILD-TYPE" 
                    TCGA-DU-6407                     TCGA-DU-6408 
"DEL PEAK 13(11P15.5) WILD-TYPE"   "DEL PEAK 13(11P15.5) MUTATED" 
                    TCGA-DU-6410                     TCGA-DU-6542 
"DEL PEAK 13(11P15.5) WILD-TYPE" "DEL PEAK 13(11P15.5) WILD-TYPE" 
                    TCGA-DU-7006                     TCGA-DU-7007 
  "DEL PEAK 13(11P15.5) MUTATED"   "DEL PEAK 13(11P15.5) MUTATED" 
                    TCGA-DU-7008                     TCGA-DU-7009 
  "DEL PEAK 13(11P15.5) MUTATED" "DEL PEAK 13(11P15.5) WILD-TYPE" 
                    TCGA-DU-7010                     TCGA-DU-7011 
  "DEL PEAK 13(11P15.5) MUTATED" "DEL PEAK 13(11P15.5) WILD-TYPE" 
                    TCGA-DU-7012                     TCGA-DU-7013 
"DEL PEAK 13(11P15.5) WILD-TYPE" "DEL PEAK 13(11P15.5) WILD-TYPE" 
                    TCGA-DU-7014                     TCGA-DU-7015 
  "DEL PEAK 13(11P15.5) MUTATED"   "DEL PEAK 13(11P15.5) MUTATED" 
                    TCGA-DU-7018                     TCGA-DU-7019 
"DEL PEAK 13(11P15.5) WILD-TYPE" "DEL PEAK 13(11P15.5) WILD-TYPE" 
                    TCGA-DU-7290                     TCGA-DU-7292 
"DEL PEAK 13(11P15.5) WILD-TYPE" "DEL PEAK 13(11P15.5) WILD-TYPE" 
                    TCGA-DU-7294                     TCGA-DU-7298 
"DEL PEAK 13(11P15.5) WILD-TYPE"   "DEL PEAK 13(11P15.5) MUTATED" 
                    TCGA-DU-7299                     TCGA-DU-7300 
"DEL PEAK 13(11P15.5) WILD-TYPE" "DEL PEAK 13(11P15.5) WILD-TYPE" 
                    TCGA-DU-7301                     TCGA-DU-7302 
"DEL PEAK 13(11P15.5) WILD-TYPE" "DEL PEAK 13(11P15.5) WILD-TYPE" 
                    TCGA-DU-7304                     TCGA-DU-7306 
"DEL PEAK 13(11P15.5) WILD-TYPE" "DEL PEAK 13(11P15.5) WILD-TYPE" 
                    TCGA-DU-7309                     TCGA-E1-5302 
  "DEL PEAK 13(11P15.5) MUTATED"   "DEL PEAK 13(11P15.5) MUTATED" 
                    TCGA-E1-5303                     TCGA-E1-5304 
"DEL PEAK 13(11P15.5) WILD-TYPE"   "DEL PEAK 13(11P15.5) MUTATED" 
                    TCGA-E1-5305                     TCGA-E1-5307 
"DEL PEAK 13(11P15.5) WILD-TYPE" "DEL PEAK 13(11P15.5) WILD-TYPE" 
                    TCGA-E1-5311                     TCGA-E1-5318 
"DEL PEAK 13(11P15.5) WILD-TYPE" "DEL PEAK 13(11P15.5) WILD-TYPE" 
                    TCGA-E1-5319                     TCGA-E1-5322 
"DEL PEAK 13(11P15.5) WILD-TYPE" "DEL PEAK 13(11P15.5) WILD-TYPE" 
                    TCGA-EZ-7264                     TCGA-FG-5962 
"DEL PEAK 13(11P15.5) WILD-TYPE" "DEL PEAK 13(11P15.5) WILD-TYPE" 
                    TCGA-FG-5963                     TCGA-FG-5964 
"DEL PEAK 13(11P15.5) WILD-TYPE" "DEL PEAK 13(11P15.5) WILD-TYPE" 
                    TCGA-FG-5965                     TCGA-FG-6688 
  "DEL PEAK 13(11P15.5) MUTATED" "DEL PEAK 13(11P15.5) WILD-TYPE" 
                    TCGA-FG-6689                     TCGA-FG-6690 
  "DEL PEAK 13(11P15.5) MUTATED" "DEL PEAK 13(11P15.5) WILD-TYPE" 
                    TCGA-FG-6691                     TCGA-FG-6692 
"DEL PEAK 13(11P15.5) WILD-TYPE" "DEL PEAK 13(11P15.5) WILD-TYPE" 
                    TCGA-FG-7634                     TCGA-FG-7636 
"DEL PEAK 13(11P15.5) WILD-TYPE" "DEL PEAK 13(11P15.5) WILD-TYPE" 
                    TCGA-FG-7638                     TCGA-FG-7643 
"DEL PEAK 13(11P15.5) WILD-TYPE" "DEL PEAK 13(11P15.5) WILD-TYPE" 
                    TCGA-FN-7833                     TCGA-HT-7467 
"DEL PEAK 13(11P15.5) WILD-TYPE" "DEL PEAK 13(11P15.5) WILD-TYPE" 
                    TCGA-HT-7468                     TCGA-HT-7470 
"DEL PEAK 13(11P15.5) WILD-TYPE"   "DEL PEAK 13(11P15.5) MUTATED" 
                    TCGA-HT-7472                     TCGA-HT-7473 
"DEL PEAK 13(11P15.5) WILD-TYPE" "DEL PEAK 13(11P15.5) WILD-TYPE" 
                    TCGA-HT-7474                     TCGA-HT-7475 
"DEL PEAK 13(11P15.5) WILD-TYPE" "DEL PEAK 13(11P15.5) WILD-TYPE" 
                    TCGA-HT-7476                     TCGA-HT-7478 
"DEL PEAK 13(11P15.5) WILD-TYPE"   "DEL PEAK 13(11P15.5) MUTATED" 
                    TCGA-HT-7479                     TCGA-HT-7480 
"DEL PEAK 13(11P15.5) WILD-TYPE" "DEL PEAK 13(11P15.5) WILD-TYPE" 
                    TCGA-HT-7481                     TCGA-HT-7482 
"DEL PEAK 13(11P15.5) WILD-TYPE" "DEL PEAK 13(11P15.5) WILD-TYPE" 
                    TCGA-HT-7483                     TCGA-HT-7485 
"DEL PEAK 13(11P15.5) WILD-TYPE" "DEL PEAK 13(11P15.5) WILD-TYPE" 
                    TCGA-HT-7601                     TCGA-HT-7602 
  "DEL PEAK 13(11P15.5) MUTATED" "DEL PEAK 13(11P15.5) WILD-TYPE" 
                    TCGA-HT-7603                     TCGA-HT-7604 
  "DEL PEAK 13(11P15.5) MUTATED" "DEL PEAK 13(11P15.5) WILD-TYPE" 
                    TCGA-HT-7605                     TCGA-HT-7606 
"DEL PEAK 13(11P15.5) WILD-TYPE" "DEL PEAK 13(11P15.5) WILD-TYPE" 
                    TCGA-HT-7607                     TCGA-HT-7608 
  "DEL PEAK 13(11P15.5) MUTATED" "DEL PEAK 13(11P15.5) WILD-TYPE" 
                    TCGA-HT-7609                     TCGA-HT-7610 
"DEL PEAK 13(11P15.5) WILD-TYPE" "DEL PEAK 13(11P15.5) WILD-TYPE" 
                    TCGA-HW-7486                     TCGA-HW-7487 
"DEL PEAK 13(11P15.5) WILD-TYPE" "DEL PEAK 13(11P15.5) WILD-TYPE" 
                    TCGA-HW-7489                     TCGA-HW-7490 
"DEL PEAK 13(11P15.5) WILD-TYPE" "DEL PEAK 13(11P15.5) WILD-TYPE" 
                    TCGA-HW-7491                     TCGA-HW-7493 
"DEL PEAK 13(11P15.5) WILD-TYPE"   "DEL PEAK 13(11P15.5) MUTATED" 
                    TCGA-HW-7495                     TCGA-IK-7675 
"DEL PEAK 13(11P15.5) WILD-TYPE"   "DEL PEAK 13(11P15.5) MUTATED" 
                    TCGA-IK-8125 
"DEL PEAK 13(11P15.5) WILD-TYPE" 
                    TCGA-CS-4938                     TCGA-CS-4941 
"DEL PEAK 13(11P15.5) WILD-TYPE" "DEL PEAK 13(11P15.5) WILD-TYPE" 
                    TCGA-CS-4942                     TCGA-CS-4943 
"DEL PEAK 13(11P15.5) WILD-TYPE"   "DEL PEAK 13(11P15.5) MUTATED" 
                    TCGA-CS-4944                     TCGA-CS-5390 
"DEL PEAK 13(11P15.5) WILD-TYPE" "DEL PEAK 13(11P15.5) WILD-TYPE" 
                    TCGA-CS-5393                     TCGA-CS-5394 
"DEL PEAK 13(11P15.5) WILD-TYPE" "DEL PEAK 13(11P15.5) WILD-TYPE" 
                    TCGA-CS-5395                     TCGA-CS-5396 
"DEL PEAK 13(11P15.5) WILD-TYPE" "DEL PEAK 13(11P15.5) WILD-TYPE" 
                    TCGA-CS-5397                     TCGA-CS-6186 
"DEL PEAK 13(11P15.5) WILD-TYPE" "DEL PEAK 13(11P15.5) WILD-TYPE" 
                    TCGA-CS-6188                     TCGA-CS-6290 
"DEL PEAK 13(11P15.5) WILD-TYPE"   "DEL PEAK 13(11P15.5) MUTATED" 
                    TCGA-CS-6665                     TCGA-CS-6666 
  "DEL PEAK 13(11P15.5) MUTATED" "DEL PEAK 13(11P15.5) WILD-TYPE" 
                    TCGA-CS-6667                     TCGA-CS-6668 
"DEL PEAK 13(11P15.5) WILD-TYPE" "DEL PEAK 13(11P15.5) WILD-TYPE" 
                    TCGA-CS-6669                     TCGA-CS-6670 
"DEL PEAK 13(11P15.5) WILD-TYPE" "DEL PEAK 13(11P15.5) WILD-TYPE" 
                    TCGA-DB-5270                     TCGA-DB-5273 
"DEL PEAK 13(11P15.5) WILD-TYPE" "DEL PEAK 13(11P15.5) WILD-TYPE" 
                    TCGA-DB-5274                     TCGA-DB-5275 
"DEL PEAK 13(11P15.5) WILD-TYPE"   "DEL PEAK 13(11P15.5) MUTATED" 
                    TCGA-DB-5276                     TCGA-DB-5277 
"DEL PEAK 13(11P15.5) WILD-TYPE"   "DEL PEAK 13(11P15.5) MUTATED" 
                    TCGA-DB-5278                     TCGA-DB-5279 
"DEL PEAK 13(11P15.5) WILD-TYPE" "DEL PEAK 13(11P15.5) WILD-TYPE" 
                    TCGA-DB-5280                     TCGA-DB-5281 
"DEL PEAK 13(11P15.5) WILD-TYPE" "DEL PEAK 13(11P15.5) WILD-TYPE" 
                    TCGA-DH-5140                     TCGA-DH-5141 
  "DEL PEAK 13(11P15.5) MUTATED" "DEL PEAK 13(11P15.5) WILD-TYPE" 
                    TCGA-DH-5142                     TCGA-DH-5143 
  "DEL PEAK 13(11P15.5) MUTATED" "DEL PEAK 13(11P15.5) WILD-TYPE" 
                    TCGA-DH-5144                     TCGA-DU-5847 
"DEL PEAK 13(11P15.5) WILD-TYPE" "DEL PEAK 13(11P15.5) WILD-TYPE" 
                    TCGA-DU-5849                     TCGA-DU-5851 
"DEL PEAK 13(11P15.5) WILD-TYPE"   "DEL PEAK 13(11P15.5) MUTATED" 
                    TCGA-DU-5852                     TCGA-DU-5853 
"DEL PEAK 13(11P15.5) WILD-TYPE"   "DEL PEAK 13(11P15.5) MUTATED" 
                    TCGA-DU-5854                     TCGA-DU-5855 
"DEL PEAK 13(11P15.5) WILD-TYPE" "DEL PEAK 13(11P15.5) WILD-TYPE" 
                    TCGA-DU-5870                     TCGA-DU-5871 
"DEL PEAK 13(11P15.5) WILD-TYPE" "DEL PEAK 13(11P15.5) WILD-TYPE" 
                    TCGA-DU-5872                     TCGA-DU-5874 
"DEL PEAK 13(11P15.5) WILD-TYPE" "DEL PEAK 13(11P15.5) WILD-TYPE" 
                    TCGA-DU-6392                     TCGA-DU-6393 
"DEL PEAK 13(11P15.5) WILD-TYPE" "DEL PEAK 13(11P15.5) WILD-TYPE" 
                    TCGA-DU-6394                     TCGA-DU-6395 
"DEL PEAK 13(11P15.5) WILD-TYPE" "DEL PEAK 13(11P15.5) WILD-TYPE" 
                    TCGA-DU-6396                     TCGA-DU-6397 
  "DEL PEAK 13(11P15.5) MUTATED" "DEL PEAK 13(11P15.5) WILD-TYPE" 
                    TCGA-DU-6399                     TCGA-DU-6400 
"DEL PEAK 13(11P15.5) WILD-TYPE" "DEL PEAK 13(11P15.5) WILD-TYPE" 
                    TCGA-DU-6401                     TCGA-DU-6402 
"DEL PEAK 13(11P15.5) WILD-TYPE" "DEL PEAK 13(11P15.5) WILD-TYPE" 
                    TCGA-DU-6403                     TCGA-DU-6404 
"DEL PEAK 13(11P15.5) WILD-TYPE" "DEL PEAK 13(11P15.5) WILD-TYPE" 
                    TCGA-DU-6405                     TCGA-DU-6406 
"DEL PEAK 13(11P15.5) WILD-TYPE" "DEL PEAK 13(11P15.5) WILD-TYPE" 
                    TCGA-DU-6407                     TCGA-DU-6408 
"DEL PEAK 13(11P15.5) WILD-TYPE"   "DEL PEAK 13(11P15.5) MUTATED" 
                    TCGA-DU-6410                     TCGA-DU-6542 
"DEL PEAK 13(11P15.5) WILD-TYPE" "DEL PEAK 13(11P15.5) WILD-TYPE" 
                    TCGA-DU-7006                     TCGA-DU-7007 
  "DEL PEAK 13(11P15.5) MUTATED"   "DEL PEAK 13(11P15.5) MUTATED" 
                    TCGA-DU-7008                     TCGA-DU-7009 
  "DEL PEAK 13(11P15.5) MUTATED" "DEL PEAK 13(11P15.5) WILD-TYPE" 
                    TCGA-DU-7010                     TCGA-DU-7011 
  "DEL PEAK 13(11P15.5) MUTATED" "DEL PEAK 13(11P15.5) WILD-TYPE" 
                    TCGA-DU-7012                     TCGA-DU-7013 
"DEL PEAK 13(11P15.5) WILD-TYPE" "DEL PEAK 13(11P15.5) WILD-TYPE" 
                    TCGA-DU-7014                     TCGA-DU-7015 
  "DEL PEAK 13(11P15.5) MUTATED"   "DEL PEAK 13(11P15.5) MUTATED" 
                    TCGA-DU-7018                     TCGA-DU-7019 
"DEL PEAK 13(11P15.5) WILD-TYPE" "DEL PEAK 13(11P15.5) WILD-TYPE" 
                    TCGA-DU-7290                     TCGA-DU-7292 
"DEL PEAK 13(11P15.5) WILD-TYPE" "DEL PEAK 13(11P15.5) WILD-TYPE" 
                    TCGA-DU-7294                     TCGA-DU-7298 
"DEL PEAK 13(11P15.5) WILD-TYPE"   "DEL PEAK 13(11P15.5) MUTATED" 
                    TCGA-DU-7299                     TCGA-DU-7300 
"DEL PEAK 13(11P15.5) WILD-TYPE" "DEL PEAK 13(11P15.5) WILD-TYPE" 
                    TCGA-DU-7301                     TCGA-DU-7302 
"DEL PEAK 13(11P15.5) WILD-TYPE" "DEL PEAK 13(11P15.5) WILD-TYPE" 
                    TCGA-DU-7304                     TCGA-DU-7306 
"DEL PEAK 13(11P15.5) WILD-TYPE" "DEL PEAK 13(11P15.5) WILD-TYPE" 
                    TCGA-DU-7309                     TCGA-E1-5302 
  "DEL PEAK 13(11P15.5) MUTATED"   "DEL PEAK 13(11P15.5) MUTATED" 
                    TCGA-E1-5303                     TCGA-E1-5304 
"DEL PEAK 13(11P15.5) WILD-TYPE"   "DEL PEAK 13(11P15.5) MUTATED" 
                    TCGA-E1-5305                     TCGA-E1-5307 
"DEL PEAK 13(11P15.5) WILD-TYPE" "DEL PEAK 13(11P15.5) WILD-TYPE" 
                    TCGA-E1-5311                     TCGA-E1-5318 
"DEL PEAK 13(11P15.5) WILD-TYPE" "DEL PEAK 13(11P15.5) WILD-TYPE" 
                    TCGA-E1-5319                     TCGA-E1-5322 
"DEL PEAK 13(11P15.5) WILD-TYPE" "DEL PEAK 13(11P15.5) WILD-TYPE" 
                    TCGA-EZ-7264                     TCGA-FG-5962 
"DEL PEAK 13(11P15.5) WILD-TYPE" "DEL PEAK 13(11P15.5) WILD-TYPE" 
                    TCGA-FG-5963                     TCGA-FG-5964 
"DEL PEAK 13(11P15.5) WILD-TYPE" "DEL PEAK 13(11P15.5) WILD-TYPE" 
                    TCGA-FG-5965                     TCGA-FG-6688 
  "DEL PEAK 13(11P15.5) MUTATED" "DEL PEAK 13(11P15.5) WILD-TYPE" 
                    TCGA-FG-6689                     TCGA-FG-6690 
  "DEL PEAK 13(11P15.5) MUTATED" "DEL PEAK 13(11P15.5) WILD-TYPE" 
                    TCGA-FG-6691                     TCGA-FG-6692 
"DEL PEAK 13(11P15.5) WILD-TYPE" "DEL PEAK 13(11P15.5) WILD-TYPE" 
                    TCGA-FG-7634                     TCGA-FG-7636 
"DEL PEAK 13(11P15.5) WILD-TYPE" "DEL PEAK 13(11P15.5) WILD-TYPE" 
                    TCGA-FG-7638                     TCGA-FG-7643 
"DEL PEAK 13(11P15.5) WILD-TYPE" "DEL PEAK 13(11P15.5) WILD-TYPE" 
                    TCGA-FN-7833                     TCGA-HT-7467 
"DEL PEAK 13(11P15.5) WILD-TYPE" "DEL PEAK 13(11P15.5) WILD-TYPE" 
                    TCGA-HT-7468                     TCGA-HT-7470 
"DEL PEAK 13(11P15.5) WILD-TYPE"   "DEL PEAK 13(11P15.5) MUTATED" 
                    TCGA-HT-7472                     TCGA-HT-7473 
"DEL PEAK 13(11P15.5) WILD-TYPE" "DEL PEAK 13(11P15.5) WILD-TYPE" 
                    TCGA-HT-7474                     TCGA-HT-7475 
"DEL PEAK 13(11P15.5) WILD-TYPE" "DEL PEAK 13(11P15.5) WILD-TYPE" 
                    TCGA-HT-7476                     TCGA-HT-7478 
"DEL PEAK 13(11P15.5) WILD-TYPE"   "DEL PEAK 13(11P15.5) MUTATED" 
                    TCGA-HT-7479                     TCGA-HT-7480 
"DEL PEAK 13(11P15.5) WILD-TYPE" "DEL PEAK 13(11P15.5) WILD-TYPE" 
                    TCGA-HT-7481                     TCGA-HT-7482 
"DEL PEAK 13(11P15.5) WILD-TYPE" "DEL PEAK 13(11P15.5) WILD-TYPE" 
                    TCGA-HT-7483                     TCGA-HT-7485 
"DEL PEAK 13(11P15.5) WILD-TYPE" "DEL PEAK 13(11P15.5) WILD-TYPE" 
                    TCGA-HT-7601                     TCGA-HT-7602 
  "DEL PEAK 13(11P15.5) MUTATED" "DEL PEAK 13(11P15.5) WILD-TYPE" 
                    TCGA-HT-7603                     TCGA-HT-7604 
  "DEL PEAK 13(11P15.5) MUTATED" "DEL PEAK 13(11P15.5) WILD-TYPE" 
                    TCGA-HT-7605                     TCGA-HT-7606 
"DEL PEAK 13(11P15.5) WILD-TYPE" "DEL PEAK 13(11P15.5) WILD-TYPE" 
                    TCGA-HT-7607                     TCGA-HT-7608 
  "DEL PEAK 13(11P15.5) MUTATED" "DEL PEAK 13(11P15.5) WILD-TYPE" 
                    TCGA-HT-7609                     TCGA-HT-7610 
"DEL PEAK 13(11P15.5) WILD-TYPE" "DEL PEAK 13(11P15.5) WILD-TYPE" 
                    TCGA-HW-7486                     TCGA-HW-7487 
"DEL PEAK 13(11P15.5) WILD-TYPE" "DEL PEAK 13(11P15.5) WILD-TYPE" 
                    TCGA-HW-7489                     TCGA-HW-7490 
"DEL PEAK 13(11P15.5) WILD-TYPE" "DEL PEAK 13(11P15.5) WILD-TYPE" 
                    TCGA-HW-7491                     TCGA-HW-7493 
"DEL PEAK 13(11P15.5) WILD-TYPE"   "DEL PEAK 13(11P15.5) MUTATED" 
                    TCGA-HW-7495                     TCGA-IK-7675 
"DEL PEAK 13(11P15.5) WILD-TYPE"   "DEL PEAK 13(11P15.5) MUTATED" 
                    TCGA-IK-8125 
"DEL PEAK 13(11P15.5) WILD-TYPE" 
[1] "hr=" "1.2"
D27V2, continuous
D27V3, binary
[1] "tbl2"
                                cls
clus                             [,1] [,2]
  DEL PEAK 13(11P15.5) MUTATED     15   15
  DEL PEAK 13(11P15.5) WILD-TYPE   47   68
        clus
vv       DEL PEAK 13(11P15.5) MUTATED DEL PEAK 13(11P15.5) WILD-TYPE
  FEMALE                           15                             47
  MALE                             15                             68
D27V4, continuous
D27V5, multiclass
                   clus
vv                  DEL PEAK 13(11P15.5) MUTATED DEL PEAK 13(11P15.5) WILD-TYPE
  ASTROCYTOMA                                 16                             34
  OLIGOASTROCYTOMA                             6                             30
  OLIGODENDROGLIOMA                            8                             50
D27V6, binary
[1] "tbl2"
                                cls
clus                             [,1] [,2]
  DEL PEAK 13(11P15.5) MUTATED      8   22
  DEL PEAK 13(11P15.5) WILD-TYPE   51   64
     clus
vv    DEL PEAK 13(11P15.5) MUTATED DEL PEAK 13(11P15.5) WILD-TYPE
  NO                            22                             64
  YES                            8                             51
D27V7, binary
[1] "tbl2"
                                cls
clus                             [,1] [,2]
  DEL PEAK 13(11P15.5) MUTATED     13   17
  DEL PEAK 13(11P15.5) WILD-TYPE   61   54
     clus
vv    DEL PEAK 13(11P15.5) MUTATED DEL PEAK 13(11P15.5) WILD-TYPE
  NO                            17                             54
  YES                           13                             61

Clustering(28) Variable = Del Peak 14(13q14.13) mutation analysis
D28V1, survival
                     TCGA-CS-4938                      TCGA-CS-4941 
"DEL PEAK 14(13Q14.13) WILD-TYPE" "DEL PEAK 14(13Q14.13) WILD-TYPE" 
                     TCGA-CS-4942                      TCGA-CS-4943 
"DEL PEAK 14(13Q14.13) WILD-TYPE"   "DEL PEAK 14(13Q14.13) MUTATED" 
                     TCGA-CS-4944                      TCGA-CS-5390 
"DEL PEAK 14(13Q14.13) WILD-TYPE" "DEL PEAK 14(13Q14.13) WILD-TYPE" 
                     TCGA-CS-5393                      TCGA-CS-5394 
"DEL PEAK 14(13Q14.13) WILD-TYPE" "DEL PEAK 14(13Q14.13) WILD-TYPE" 
                     TCGA-CS-5395                      TCGA-CS-5396 
"DEL PEAK 14(13Q14.13) WILD-TYPE" "DEL PEAK 14(13Q14.13) WILD-TYPE" 
                     TCGA-CS-5397                      TCGA-CS-6186 
"DEL PEAK 14(13Q14.13) WILD-TYPE" "DEL PEAK 14(13Q14.13) WILD-TYPE" 
                     TCGA-CS-6188                      TCGA-CS-6290 
"DEL PEAK 14(13Q14.13) WILD-TYPE"   "DEL PEAK 14(13Q14.13) MUTATED" 
                     TCGA-CS-6665                      TCGA-CS-6666 
"DEL PEAK 14(13Q14.13) WILD-TYPE"   "DEL PEAK 14(13Q14.13) MUTATED" 
                     TCGA-CS-6667                      TCGA-CS-6668 
"DEL PEAK 14(13Q14.13) WILD-TYPE" "DEL PEAK 14(13Q14.13) WILD-TYPE" 
                     TCGA-CS-6669                      TCGA-CS-6670 
"DEL PEAK 14(13Q14.13) WILD-TYPE"   "DEL PEAK 14(13Q14.13) MUTATED" 
                     TCGA-DB-5270                      TCGA-DB-5273 
"DEL PEAK 14(13Q14.13) WILD-TYPE" "DEL PEAK 14(13Q14.13) WILD-TYPE" 
                     TCGA-DB-5274                      TCGA-DB-5275 
"DEL PEAK 14(13Q14.13) WILD-TYPE"   "DEL PEAK 14(13Q14.13) MUTATED" 
                     TCGA-DB-5276                      TCGA-DB-5277 
"DEL PEAK 14(13Q14.13) WILD-TYPE"   "DEL PEAK 14(13Q14.13) MUTATED" 
                     TCGA-DB-5278                      TCGA-DB-5279 
"DEL PEAK 14(13Q14.13) WILD-TYPE" "DEL PEAK 14(13Q14.13) WILD-TYPE" 
                     TCGA-DB-5280                      TCGA-DB-5281 
"DEL PEAK 14(13Q14.13) WILD-TYPE" "DEL PEAK 14(13Q14.13) WILD-TYPE" 
                     TCGA-DH-5140                      TCGA-DH-5141 
  "DEL PEAK 14(13Q14.13) MUTATED" "DEL PEAK 14(13Q14.13) WILD-TYPE" 
                     TCGA-DH-5142                      TCGA-DH-5143 
  "DEL PEAK 14(13Q14.13) MUTATED" "DEL PEAK 14(13Q14.13) WILD-TYPE" 
                     TCGA-DH-5144                      TCGA-DU-5847 
"DEL PEAK 14(13Q14.13) WILD-TYPE"   "DEL PEAK 14(13Q14.13) MUTATED" 
                     TCGA-DU-5849                      TCGA-DU-5851 
"DEL PEAK 14(13Q14.13) WILD-TYPE" "DEL PEAK 14(13Q14.13) WILD-TYPE" 
                     TCGA-DU-5852                      TCGA-DU-5853 
  "DEL PEAK 14(13Q14.13) MUTATED"   "DEL PEAK 14(13Q14.13) MUTATED" 
                     TCGA-DU-5854                      TCGA-DU-5855 
"DEL PEAK 14(13Q14.13) WILD-TYPE" "DEL PEAK 14(13Q14.13) WILD-TYPE" 
                     TCGA-DU-5870                      TCGA-DU-5871 
"DEL PEAK 14(13Q14.13) WILD-TYPE" "DEL PEAK 14(13Q14.13) WILD-TYPE" 
                     TCGA-DU-5872                      TCGA-DU-5874 
"DEL PEAK 14(13Q14.13) WILD-TYPE" "DEL PEAK 14(13Q14.13) WILD-TYPE" 
                     TCGA-DU-6392                      TCGA-DU-6393 
  "DEL PEAK 14(13Q14.13) MUTATED" "DEL PEAK 14(13Q14.13) WILD-TYPE" 
                     TCGA-DU-6394                      TCGA-DU-6395 
"DEL PEAK 14(13Q14.13) WILD-TYPE" "DEL PEAK 14(13Q14.13) WILD-TYPE" 
                     TCGA-DU-6396                      TCGA-DU-6397 
"DEL PEAK 14(13Q14.13) WILD-TYPE" "DEL PEAK 14(13Q14.13) WILD-TYPE" 
                     TCGA-DU-6399                      TCGA-DU-6400 
  "DEL PEAK 14(13Q14.13) MUTATED"   "DEL PEAK 14(13Q14.13) MUTATED" 
                     TCGA-DU-6401                      TCGA-DU-6402 
"DEL PEAK 14(13Q14.13) WILD-TYPE" "DEL PEAK 14(13Q14.13) WILD-TYPE" 
                     TCGA-DU-6403                      TCGA-DU-6404 
"DEL PEAK 14(13Q14.13) WILD-TYPE" "DEL PEAK 14(13Q14.13) WILD-TYPE" 
                     TCGA-DU-6405                      TCGA-DU-6406 
"DEL PEAK 14(13Q14.13) WILD-TYPE" "DEL PEAK 14(13Q14.13) WILD-TYPE" 
                     TCGA-DU-6407                      TCGA-DU-6408 
  "DEL PEAK 14(13Q14.13) MUTATED"   "DEL PEAK 14(13Q14.13) MUTATED" 
                     TCGA-DU-6410                      TCGA-DU-6542 
"DEL PEAK 14(13Q14.13) WILD-TYPE" "DEL PEAK 14(13Q14.13) WILD-TYPE" 
                     TCGA-DU-7006                      TCGA-DU-7007 
  "DEL PEAK 14(13Q14.13) MUTATED" "DEL PEAK 14(13Q14.13) WILD-TYPE" 
                     TCGA-DU-7008                      TCGA-DU-7009 
  "DEL PEAK 14(13Q14.13) MUTATED" "DEL PEAK 14(13Q14.13) WILD-TYPE" 
                     TCGA-DU-7010                      TCGA-DU-7011 
  "DEL PEAK 14(13Q14.13) MUTATED" "DEL PEAK 14(13Q14.13) WILD-TYPE" 
                     TCGA-DU-7012                      TCGA-DU-7013 
"DEL PEAK 14(13Q14.13) WILD-TYPE" "DEL PEAK 14(13Q14.13) WILD-TYPE" 
                     TCGA-DU-7014                      TCGA-DU-7015 
"DEL PEAK 14(13Q14.13) WILD-TYPE" "DEL PEAK 14(13Q14.13) WILD-TYPE" 
                     TCGA-DU-7018                      TCGA-DU-7019 
"DEL PEAK 14(13Q14.13) WILD-TYPE" "DEL PEAK 14(13Q14.13) WILD-TYPE" 
                     TCGA-DU-7290                      TCGA-DU-7292 
  "DEL PEAK 14(13Q14.13) MUTATED"   "DEL PEAK 14(13Q14.13) MUTATED" 
                     TCGA-DU-7294                      TCGA-DU-7298 
"DEL PEAK 14(13Q14.13) WILD-TYPE" "DEL PEAK 14(13Q14.13) WILD-TYPE" 
                     TCGA-DU-7299                      TCGA-DU-7300 
  "DEL PEAK 14(13Q14.13) MUTATED" "DEL PEAK 14(13Q14.13) WILD-TYPE" 
                     TCGA-DU-7301                      TCGA-DU-7302 
  "DEL PEAK 14(13Q14.13) MUTATED" "DEL PEAK 14(13Q14.13) WILD-TYPE" 
                     TCGA-DU-7304                      TCGA-DU-7306 
"DEL PEAK 14(13Q14.13) WILD-TYPE" "DEL PEAK 14(13Q14.13) WILD-TYPE" 
                     TCGA-DU-7309                      TCGA-E1-5302 
"DEL PEAK 14(13Q14.13) WILD-TYPE"   "DEL PEAK 14(13Q14.13) MUTATED" 
                     TCGA-E1-5303                      TCGA-E1-5304 
  "DEL PEAK 14(13Q14.13) MUTATED"   "DEL PEAK 14(13Q14.13) MUTATED" 
                     TCGA-E1-5305                      TCGA-E1-5307 
"DEL PEAK 14(13Q14.13) WILD-TYPE"   "DEL PEAK 14(13Q14.13) MUTATED" 
                     TCGA-E1-5311                      TCGA-E1-5318 
"DEL PEAK 14(13Q14.13) WILD-TYPE" "DEL PEAK 14(13Q14.13) WILD-TYPE" 
                     TCGA-E1-5319                      TCGA-E1-5322 
"DEL PEAK 14(13Q14.13) WILD-TYPE"   "DEL PEAK 14(13Q14.13) MUTATED" 
                     TCGA-EZ-7264                      TCGA-FG-5962 
"DEL PEAK 14(13Q14.13) WILD-TYPE"   "DEL PEAK 14(13Q14.13) MUTATED" 
                     TCGA-FG-5963                      TCGA-FG-5964 
  "DEL PEAK 14(13Q14.13) MUTATED"   "DEL PEAK 14(13Q14.13) MUTATED" 
                     TCGA-FG-5965                      TCGA-FG-6688 
"DEL PEAK 14(13Q14.13) WILD-TYPE"   "DEL PEAK 14(13Q14.13) MUTATED" 
                     TCGA-FG-6689                      TCGA-FG-6690 
  "DEL PEAK 14(13Q14.13) MUTATED" "DEL PEAK 14(13Q14.13) WILD-TYPE" 
                     TCGA-FG-6691                      TCGA-FG-6692 
"DEL PEAK 14(13Q14.13) WILD-TYPE"   "DEL PEAK 14(13Q14.13) MUTATED" 
                     TCGA-FG-7634                      TCGA-FG-7636 
"DEL PEAK 14(13Q14.13) WILD-TYPE" "DEL PEAK 14(13Q14.13) WILD-TYPE" 
                     TCGA-FG-7638                      TCGA-FG-7643 
"DEL PEAK 14(13Q14.13) WILD-TYPE" "DEL PEAK 14(13Q14.13) WILD-TYPE" 
                     TCGA-FN-7833                      TCGA-HT-7467 
"DEL PEAK 14(13Q14.13) WILD-TYPE" "DEL PEAK 14(13Q14.13) WILD-TYPE" 
                     TCGA-HT-7468                      TCGA-HT-7470 
"DEL PEAK 14(13Q14.13) WILD-TYPE"   "DEL PEAK 14(13Q14.13) MUTATED" 
                     TCGA-HT-7472                      TCGA-HT-7473 
"DEL PEAK 14(13Q14.13) WILD-TYPE" "DEL PEAK 14(13Q14.13) WILD-TYPE" 
                     TCGA-HT-7474                      TCGA-HT-7475 
"DEL PEAK 14(13Q14.13) WILD-TYPE"   "DEL PEAK 14(13Q14.13) MUTATED" 
                     TCGA-HT-7476                      TCGA-HT-7478 
  "DEL PEAK 14(13Q14.13) MUTATED" "DEL PEAK 14(13Q14.13) WILD-TYPE" 
                     TCGA-HT-7479                      TCGA-HT-7480 
"DEL PEAK 14(13Q14.13) WILD-TYPE" "DEL PEAK 14(13Q14.13) WILD-TYPE" 
                     TCGA-HT-7481                      TCGA-HT-7482 
"DEL PEAK 14(13Q14.13) WILD-TYPE"   "DEL PEAK 14(13Q14.13) MUTATED" 
                     TCGA-HT-7483                      TCGA-HT-7485 
  "DEL PEAK 14(13Q14.13) MUTATED" "DEL PEAK 14(13Q14.13) WILD-TYPE" 
                     TCGA-HT-7601                      TCGA-HT-7602 
"DEL PEAK 14(13Q14.13) WILD-TYPE" "DEL PEAK 14(13Q14.13) WILD-TYPE" 
                     TCGA-HT-7603                      TCGA-HT-7604 
"DEL PEAK 14(13Q14.13) WILD-TYPE"   "DEL PEAK 14(13Q14.13) MUTATED" 
                     TCGA-HT-7605                      TCGA-HT-7606 
  "DEL PEAK 14(13Q14.13) MUTATED"   "DEL PEAK 14(13Q14.13) MUTATED" 
                     TCGA-HT-7607                      TCGA-HT-7608 
"DEL PEAK 14(13Q14.13) WILD-TYPE" "DEL PEAK 14(13Q14.13) WILD-TYPE" 
                     TCGA-HT-7609                      TCGA-HT-7610 
"DEL PEAK 14(13Q14.13) WILD-TYPE" "DEL PEAK 14(13Q14.13) WILD-TYPE" 
                     TCGA-HW-7486                      TCGA-HW-7487 
"DEL PEAK 14(13Q14.13) WILD-TYPE" "DEL PEAK 14(13Q14.13) WILD-TYPE" 
                     TCGA-HW-7489                      TCGA-HW-7490 
  "DEL PEAK 14(13Q14.13) MUTATED" "DEL PEAK 14(13Q14.13) WILD-TYPE" 
                     TCGA-HW-7491                      TCGA-HW-7493 
  "DEL PEAK 14(13Q14.13) MUTATED" "DEL PEAK 14(13Q14.13) WILD-TYPE" 
                     TCGA-HW-7495                      TCGA-IK-7675 
"DEL PEAK 14(13Q14.13) WILD-TYPE" "DEL PEAK 14(13Q14.13) WILD-TYPE" 
                     TCGA-IK-8125 
"DEL PEAK 14(13Q14.13) WILD-TYPE" 
                     TCGA-CS-4938                      TCGA-CS-4941 
"DEL PEAK 14(13Q14.13) WILD-TYPE" "DEL PEAK 14(13Q14.13) WILD-TYPE" 
                     TCGA-CS-4942                      TCGA-CS-4943 
"DEL PEAK 14(13Q14.13) WILD-TYPE"   "DEL PEAK 14(13Q14.13) MUTATED" 
                     TCGA-CS-4944                      TCGA-CS-5390 
"DEL PEAK 14(13Q14.13) WILD-TYPE" "DEL PEAK 14(13Q14.13) WILD-TYPE" 
                     TCGA-CS-5393                      TCGA-CS-5394 
"DEL PEAK 14(13Q14.13) WILD-TYPE" "DEL PEAK 14(13Q14.13) WILD-TYPE" 
                     TCGA-CS-5395                      TCGA-CS-5396 
"DEL PEAK 14(13Q14.13) WILD-TYPE" "DEL PEAK 14(13Q14.13) WILD-TYPE" 
                     TCGA-CS-5397                      TCGA-CS-6186 
"DEL PEAK 14(13Q14.13) WILD-TYPE" "DEL PEAK 14(13Q14.13) WILD-TYPE" 
                     TCGA-CS-6188                      TCGA-CS-6290 
"DEL PEAK 14(13Q14.13) WILD-TYPE"   "DEL PEAK 14(13Q14.13) MUTATED" 
                     TCGA-CS-6665                      TCGA-CS-6666 
"DEL PEAK 14(13Q14.13) WILD-TYPE"   "DEL PEAK 14(13Q14.13) MUTATED" 
                     TCGA-CS-6667                      TCGA-CS-6668 
"DEL PEAK 14(13Q14.13) WILD-TYPE" "DEL PEAK 14(13Q14.13) WILD-TYPE" 
                     TCGA-CS-6669                      TCGA-CS-6670 
"DEL PEAK 14(13Q14.13) WILD-TYPE"   "DEL PEAK 14(13Q14.13) MUTATED" 
                     TCGA-DB-5270                      TCGA-DB-5273 
"DEL PEAK 14(13Q14.13) WILD-TYPE" "DEL PEAK 14(13Q14.13) WILD-TYPE" 
                     TCGA-DB-5274                      TCGA-DB-5275 
"DEL PEAK 14(13Q14.13) WILD-TYPE"   "DEL PEAK 14(13Q14.13) MUTATED" 
                     TCGA-DB-5276                      TCGA-DB-5277 
"DEL PEAK 14(13Q14.13) WILD-TYPE"   "DEL PEAK 14(13Q14.13) MUTATED" 
                     TCGA-DB-5278                      TCGA-DB-5279 
"DEL PEAK 14(13Q14.13) WILD-TYPE" "DEL PEAK 14(13Q14.13) WILD-TYPE" 
                     TCGA-DB-5280                      TCGA-DB-5281 
"DEL PEAK 14(13Q14.13) WILD-TYPE" "DEL PEAK 14(13Q14.13) WILD-TYPE" 
                     TCGA-DH-5140                      TCGA-DH-5141 
  "DEL PEAK 14(13Q14.13) MUTATED" "DEL PEAK 14(13Q14.13) WILD-TYPE" 
                     TCGA-DH-5142                      TCGA-DH-5143 
  "DEL PEAK 14(13Q14.13) MUTATED" "DEL PEAK 14(13Q14.13) WILD-TYPE" 
                     TCGA-DH-5144                      TCGA-DU-5847 
"DEL PEAK 14(13Q14.13) WILD-TYPE"   "DEL PEAK 14(13Q14.13) MUTATED" 
                     TCGA-DU-5849                      TCGA-DU-5851 
"DEL PEAK 14(13Q14.13) WILD-TYPE" "DEL PEAK 14(13Q14.13) WILD-TYPE" 
                     TCGA-DU-5852                      TCGA-DU-5853 
  "DEL PEAK 14(13Q14.13) MUTATED"   "DEL PEAK 14(13Q14.13) MUTATED" 
                     TCGA-DU-5854                      TCGA-DU-5855 
"DEL PEAK 14(13Q14.13) WILD-TYPE" "DEL PEAK 14(13Q14.13) WILD-TYPE" 
                     TCGA-DU-5870                      TCGA-DU-5871 
"DEL PEAK 14(13Q14.13) WILD-TYPE" "DEL PEAK 14(13Q14.13) WILD-TYPE" 
                     TCGA-DU-5872                      TCGA-DU-5874 
"DEL PEAK 14(13Q14.13) WILD-TYPE" "DEL PEAK 14(13Q14.13) WILD-TYPE" 
                     TCGA-DU-6392                      TCGA-DU-6393 
  "DEL PEAK 14(13Q14.13) MUTATED" "DEL PEAK 14(13Q14.13) WILD-TYPE" 
                     TCGA-DU-6394                      TCGA-DU-6395 
"DEL PEAK 14(13Q14.13) WILD-TYPE" "DEL PEAK 14(13Q14.13) WILD-TYPE" 
                     TCGA-DU-6396                      TCGA-DU-6397 
"DEL PEAK 14(13Q14.13) WILD-TYPE" "DEL PEAK 14(13Q14.13) WILD-TYPE" 
                     TCGA-DU-6399                      TCGA-DU-6400 
  "DEL PEAK 14(13Q14.13) MUTATED"   "DEL PEAK 14(13Q14.13) MUTATED" 
                     TCGA-DU-6401                      TCGA-DU-6402 
"DEL PEAK 14(13Q14.13) WILD-TYPE" "DEL PEAK 14(13Q14.13) WILD-TYPE" 
                     TCGA-DU-6403                      TCGA-DU-6404 
"DEL PEAK 14(13Q14.13) WILD-TYPE" "DEL PEAK 14(13Q14.13) WILD-TYPE" 
                     TCGA-DU-6405                      TCGA-DU-6406 
"DEL PEAK 14(13Q14.13) WILD-TYPE" "DEL PEAK 14(13Q14.13) WILD-TYPE" 
                     TCGA-DU-6407                      TCGA-DU-6408 
  "DEL PEAK 14(13Q14.13) MUTATED"   "DEL PEAK 14(13Q14.13) MUTATED" 
                     TCGA-DU-6410                      TCGA-DU-6542 
"DEL PEAK 14(13Q14.13) WILD-TYPE" "DEL PEAK 14(13Q14.13) WILD-TYPE" 
                     TCGA-DU-7006                      TCGA-DU-7007 
  "DEL PEAK 14(13Q14.13) MUTATED" "DEL PEAK 14(13Q14.13) WILD-TYPE" 
                     TCGA-DU-7008                      TCGA-DU-7009 
  "DEL PEAK 14(13Q14.13) MUTATED" "DEL PEAK 14(13Q14.13) WILD-TYPE" 
                     TCGA-DU-7010                      TCGA-DU-7011 
  "DEL PEAK 14(13Q14.13) MUTATED" "DEL PEAK 14(13Q14.13) WILD-TYPE" 
                     TCGA-DU-7012                      TCGA-DU-7013 
"DEL PEAK 14(13Q14.13) WILD-TYPE" "DEL PEAK 14(13Q14.13) WILD-TYPE" 
                     TCGA-DU-7014                      TCGA-DU-7015 
"DEL PEAK 14(13Q14.13) WILD-TYPE" "DEL PEAK 14(13Q14.13) WILD-TYPE" 
                     TCGA-DU-7018                      TCGA-DU-7019 
"DEL PEAK 14(13Q14.13) WILD-TYPE" "DEL PEAK 14(13Q14.13) WILD-TYPE" 
                     TCGA-DU-7290                      TCGA-DU-7292 
  "DEL PEAK 14(13Q14.13) MUTATED"   "DEL PEAK 14(13Q14.13) MUTATED" 
                     TCGA-DU-7294                      TCGA-DU-7298 
"DEL PEAK 14(13Q14.13) WILD-TYPE" "DEL PEAK 14(13Q14.13) WILD-TYPE" 
                     TCGA-DU-7299                      TCGA-DU-7300 
  "DEL PEAK 14(13Q14.13) MUTATED" "DEL PEAK 14(13Q14.13) WILD-TYPE" 
                     TCGA-DU-7301                      TCGA-DU-7302 
  "DEL PEAK 14(13Q14.13) MUTATED" "DEL PEAK 14(13Q14.13) WILD-TYPE" 
                     TCGA-DU-7304                      TCGA-DU-7306 
"DEL PEAK 14(13Q14.13) WILD-TYPE" "DEL PEAK 14(13Q14.13) WILD-TYPE" 
                     TCGA-DU-7309                      TCGA-E1-5302 
"DEL PEAK 14(13Q14.13) WILD-TYPE"   "DEL PEAK 14(13Q14.13) MUTATED" 
                     TCGA-E1-5303                      TCGA-E1-5304 
  "DEL PEAK 14(13Q14.13) MUTATED"   "DEL PEAK 14(13Q14.13) MUTATED" 
                     TCGA-E1-5305                      TCGA-E1-5307 
"DEL PEAK 14(13Q14.13) WILD-TYPE"   "DEL PEAK 14(13Q14.13) MUTATED" 
                     TCGA-E1-5311                      TCGA-E1-5318 
"DEL PEAK 14(13Q14.13) WILD-TYPE" "DEL PEAK 14(13Q14.13) WILD-TYPE" 
                     TCGA-E1-5319                      TCGA-E1-5322 
"DEL PEAK 14(13Q14.13) WILD-TYPE"   "DEL PEAK 14(13Q14.13) MUTATED" 
                     TCGA-EZ-7264                      TCGA-FG-5962 
"DEL PEAK 14(13Q14.13) WILD-TYPE"   "DEL PEAK 14(13Q14.13) MUTATED" 
                     TCGA-FG-5963                      TCGA-FG-5964 
  "DEL PEAK 14(13Q14.13) MUTATED"   "DEL PEAK 14(13Q14.13) MUTATED" 
                     TCGA-FG-5965                      TCGA-FG-6688 
"DEL PEAK 14(13Q14.13) WILD-TYPE"   "DEL PEAK 14(13Q14.13) MUTATED" 
                     TCGA-FG-6689                      TCGA-FG-6690 
  "DEL PEAK 14(13Q14.13) MUTATED" "DEL PEAK 14(13Q14.13) WILD-TYPE" 
                     TCGA-FG-6691                      TCGA-FG-6692 
"DEL PEAK 14(13Q14.13) WILD-TYPE"   "DEL PEAK 14(13Q14.13) MUTATED" 
                     TCGA-FG-7634                      TCGA-FG-7636 
"DEL PEAK 14(13Q14.13) WILD-TYPE" "DEL PEAK 14(13Q14.13) WILD-TYPE" 
                     TCGA-FG-7638                      TCGA-FG-7643 
"DEL PEAK 14(13Q14.13) WILD-TYPE" "DEL PEAK 14(13Q14.13) WILD-TYPE" 
                     TCGA-FN-7833                      TCGA-HT-7467 
"DEL PEAK 14(13Q14.13) WILD-TYPE" "DEL PEAK 14(13Q14.13) WILD-TYPE" 
                     TCGA-HT-7468                      TCGA-HT-7470 
"DEL PEAK 14(13Q14.13) WILD-TYPE"   "DEL PEAK 14(13Q14.13) MUTATED" 
                     TCGA-HT-7472                      TCGA-HT-7473 
"DEL PEAK 14(13Q14.13) WILD-TYPE" "DEL PEAK 14(13Q14.13) WILD-TYPE" 
                     TCGA-HT-7474                      TCGA-HT-7475 
"DEL PEAK 14(13Q14.13) WILD-TYPE"   "DEL PEAK 14(13Q14.13) MUTATED" 
                     TCGA-HT-7476                      TCGA-HT-7478 
  "DEL PEAK 14(13Q14.13) MUTATED" "DEL PEAK 14(13Q14.13) WILD-TYPE" 
                     TCGA-HT-7479                      TCGA-HT-7480 
"DEL PEAK 14(13Q14.13) WILD-TYPE" "DEL PEAK 14(13Q14.13) WILD-TYPE" 
                     TCGA-HT-7481                      TCGA-HT-7482 
"DEL PEAK 14(13Q14.13) WILD-TYPE"   "DEL PEAK 14(13Q14.13) MUTATED" 
                     TCGA-HT-7483                      TCGA-HT-7485 
  "DEL PEAK 14(13Q14.13) MUTATED" "DEL PEAK 14(13Q14.13) WILD-TYPE" 
                     TCGA-HT-7601                      TCGA-HT-7602 
"DEL PEAK 14(13Q14.13) WILD-TYPE" "DEL PEAK 14(13Q14.13) WILD-TYPE" 
                     TCGA-HT-7603                      TCGA-HT-7604 
"DEL PEAK 14(13Q14.13) WILD-TYPE"   "DEL PEAK 14(13Q14.13) MUTATED" 
                     TCGA-HT-7605                      TCGA-HT-7606 
  "DEL PEAK 14(13Q14.13) MUTATED"   "DEL PEAK 14(13Q14.13) MUTATED" 
                     TCGA-HT-7607                      TCGA-HT-7608 
"DEL PEAK 14(13Q14.13) WILD-TYPE" "DEL PEAK 14(13Q14.13) WILD-TYPE" 
                     TCGA-HT-7609                      TCGA-HT-7610 
"DEL PEAK 14(13Q14.13) WILD-TYPE" "DEL PEAK 14(13Q14.13) WILD-TYPE" 
                     TCGA-HW-7486                      TCGA-HW-7487 
"DEL PEAK 14(13Q14.13) WILD-TYPE" "DEL PEAK 14(13Q14.13) WILD-TYPE" 
                     TCGA-HW-7489                      TCGA-HW-7490 
  "DEL PEAK 14(13Q14.13) MUTATED" "DEL PEAK 14(13Q14.13) WILD-TYPE" 
                     TCGA-HW-7491                      TCGA-HW-7493 
  "DEL PEAK 14(13Q14.13) MUTATED" "DEL PEAK 14(13Q14.13) WILD-TYPE" 
                     TCGA-HW-7495                      TCGA-IK-7675 
"DEL PEAK 14(13Q14.13) WILD-TYPE" "DEL PEAK 14(13Q14.13) WILD-TYPE" 
                     TCGA-IK-8125 
"DEL PEAK 14(13Q14.13) WILD-TYPE" 
                     TCGA-CS-4938                      TCGA-CS-4941 
"DEL PEAK 14(13Q14.13) WILD-TYPE" "DEL PEAK 14(13Q14.13) WILD-TYPE" 
                     TCGA-CS-4942                      TCGA-CS-4943 
"DEL PEAK 14(13Q14.13) WILD-TYPE"   "DEL PEAK 14(13Q14.13) MUTATED" 
                     TCGA-CS-4944                      TCGA-CS-5390 
"DEL PEAK 14(13Q14.13) WILD-TYPE" "DEL PEAK 14(13Q14.13) WILD-TYPE" 
                     TCGA-CS-5393                      TCGA-CS-5394 
"DEL PEAK 14(13Q14.13) WILD-TYPE" "DEL PEAK 14(13Q14.13) WILD-TYPE" 
                     TCGA-CS-5395                      TCGA-CS-5396 
"DEL PEAK 14(13Q14.13) WILD-TYPE" "DEL PEAK 14(13Q14.13) WILD-TYPE" 
                     TCGA-CS-5397                      TCGA-CS-6186 
"DEL PEAK 14(13Q14.13) WILD-TYPE" "DEL PEAK 14(13Q14.13) WILD-TYPE" 
                     TCGA-CS-6188                      TCGA-CS-6290 
"DEL PEAK 14(13Q14.13) WILD-TYPE"   "DEL PEAK 14(13Q14.13) MUTATED" 
                     TCGA-CS-6665                      TCGA-CS-6666 
"DEL PEAK 14(13Q14.13) WILD-TYPE"   "DEL PEAK 14(13Q14.13) MUTATED" 
                     TCGA-CS-6667                      TCGA-CS-6668 
"DEL PEAK 14(13Q14.13) WILD-TYPE" "DEL PEAK 14(13Q14.13) WILD-TYPE" 
                     TCGA-CS-6669                      TCGA-CS-6670 
"DEL PEAK 14(13Q14.13) WILD-TYPE"   "DEL PEAK 14(13Q14.13) MUTATED" 
                     TCGA-DB-5270                      TCGA-DB-5273 
"DEL PEAK 14(13Q14.13) WILD-TYPE" "DEL PEAK 14(13Q14.13) WILD-TYPE" 
                     TCGA-DB-5274                      TCGA-DB-5275 
"DEL PEAK 14(13Q14.13) WILD-TYPE"   "DEL PEAK 14(13Q14.13) MUTATED" 
                     TCGA-DB-5276                      TCGA-DB-5277 
"DEL PEAK 14(13Q14.13) WILD-TYPE"   "DEL PEAK 14(13Q14.13) MUTATED" 
                     TCGA-DB-5278                      TCGA-DB-5279 
"DEL PEAK 14(13Q14.13) WILD-TYPE" "DEL PEAK 14(13Q14.13) WILD-TYPE" 
                     TCGA-DB-5280                      TCGA-DB-5281 
"DEL PEAK 14(13Q14.13) WILD-TYPE" "DEL PEAK 14(13Q14.13) WILD-TYPE" 
                     TCGA-DH-5140                      TCGA-DH-5141 
  "DEL PEAK 14(13Q14.13) MUTATED" "DEL PEAK 14(13Q14.13) WILD-TYPE" 
                     TCGA-DH-5142                      TCGA-DH-5143 
  "DEL PEAK 14(13Q14.13) MUTATED" "DEL PEAK 14(13Q14.13) WILD-TYPE" 
                     TCGA-DH-5144                      TCGA-DU-5847 
"DEL PEAK 14(13Q14.13) WILD-TYPE"   "DEL PEAK 14(13Q14.13) MUTATED" 
                     TCGA-DU-5849                      TCGA-DU-5851 
"DEL PEAK 14(13Q14.13) WILD-TYPE" "DEL PEAK 14(13Q14.13) WILD-TYPE" 
                     TCGA-DU-5852                      TCGA-DU-5853 
  "DEL PEAK 14(13Q14.13) MUTATED"   "DEL PEAK 14(13Q14.13) MUTATED" 
                     TCGA-DU-5854                      TCGA-DU-5855 
"DEL PEAK 14(13Q14.13) WILD-TYPE" "DEL PEAK 14(13Q14.13) WILD-TYPE" 
                     TCGA-DU-5870                      TCGA-DU-5871 
"DEL PEAK 14(13Q14.13) WILD-TYPE" "DEL PEAK 14(13Q14.13) WILD-TYPE" 
                     TCGA-DU-5872                      TCGA-DU-5874 
"DEL PEAK 14(13Q14.13) WILD-TYPE" "DEL PEAK 14(13Q14.13) WILD-TYPE" 
                     TCGA-DU-6392                      TCGA-DU-6393 
  "DEL PEAK 14(13Q14.13) MUTATED" "DEL PEAK 14(13Q14.13) WILD-TYPE" 
                     TCGA-DU-6394                      TCGA-DU-6395 
"DEL PEAK 14(13Q14.13) WILD-TYPE" "DEL PEAK 14(13Q14.13) WILD-TYPE" 
                     TCGA-DU-6396                      TCGA-DU-6397 
"DEL PEAK 14(13Q14.13) WILD-TYPE" "DEL PEAK 14(13Q14.13) WILD-TYPE" 
                     TCGA-DU-6399                      TCGA-DU-6400 
  "DEL PEAK 14(13Q14.13) MUTATED"   "DEL PEAK 14(13Q14.13) MUTATED" 
                     TCGA-DU-6401                      TCGA-DU-6402 
"DEL PEAK 14(13Q14.13) WILD-TYPE" "DEL PEAK 14(13Q14.13) WILD-TYPE" 
                     TCGA-DU-6403                      TCGA-DU-6404 
"DEL PEAK 14(13Q14.13) WILD-TYPE" "DEL PEAK 14(13Q14.13) WILD-TYPE" 
                     TCGA-DU-6405                      TCGA-DU-6406 
"DEL PEAK 14(13Q14.13) WILD-TYPE" "DEL PEAK 14(13Q14.13) WILD-TYPE" 
                     TCGA-DU-6407                      TCGA-DU-6408 
  "DEL PEAK 14(13Q14.13) MUTATED"   "DEL PEAK 14(13Q14.13) MUTATED" 
                     TCGA-DU-6410                      TCGA-DU-6542 
"DEL PEAK 14(13Q14.13) WILD-TYPE" "DEL PEAK 14(13Q14.13) WILD-TYPE" 
                     TCGA-DU-7006                      TCGA-DU-7007 
  "DEL PEAK 14(13Q14.13) MUTATED" "DEL PEAK 14(13Q14.13) WILD-TYPE" 
                     TCGA-DU-7008                      TCGA-DU-7009 
  "DEL PEAK 14(13Q14.13) MUTATED" "DEL PEAK 14(13Q14.13) WILD-TYPE" 
                     TCGA-DU-7010                      TCGA-DU-7011 
  "DEL PEAK 14(13Q14.13) MUTATED" "DEL PEAK 14(13Q14.13) WILD-TYPE" 
                     TCGA-DU-7012                      TCGA-DU-7013 
"DEL PEAK 14(13Q14.13) WILD-TYPE" "DEL PEAK 14(13Q14.13) WILD-TYPE" 
                     TCGA-DU-7014                      TCGA-DU-7015 
"DEL PEAK 14(13Q14.13) WILD-TYPE" "DEL PEAK 14(13Q14.13) WILD-TYPE" 
                     TCGA-DU-7018                      TCGA-DU-7019 
"DEL PEAK 14(13Q14.13) WILD-TYPE" "DEL PEAK 14(13Q14.13) WILD-TYPE" 
                     TCGA-DU-7290                      TCGA-DU-7292 
  "DEL PEAK 14(13Q14.13) MUTATED"   "DEL PEAK 14(13Q14.13) MUTATED" 
                     TCGA-DU-7294                      TCGA-DU-7298 
"DEL PEAK 14(13Q14.13) WILD-TYPE" "DEL PEAK 14(13Q14.13) WILD-TYPE" 
                     TCGA-DU-7299                      TCGA-DU-7300 
  "DEL PEAK 14(13Q14.13) MUTATED" "DEL PEAK 14(13Q14.13) WILD-TYPE" 
                     TCGA-DU-7301                      TCGA-DU-7302 
  "DEL PEAK 14(13Q14.13) MUTATED" "DEL PEAK 14(13Q14.13) WILD-TYPE" 
                     TCGA-DU-7304                      TCGA-DU-7306 
"DEL PEAK 14(13Q14.13) WILD-TYPE" "DEL PEAK 14(13Q14.13) WILD-TYPE" 
                     TCGA-DU-7309                      TCGA-E1-5302 
"DEL PEAK 14(13Q14.13) WILD-TYPE"   "DEL PEAK 14(13Q14.13) MUTATED" 
                     TCGA-E1-5303                      TCGA-E1-5304 
  "DEL PEAK 14(13Q14.13) MUTATED"   "DEL PEAK 14(13Q14.13) MUTATED" 
                     TCGA-E1-5305                      TCGA-E1-5307 
"DEL PEAK 14(13Q14.13) WILD-TYPE"   "DEL PEAK 14(13Q14.13) MUTATED" 
                     TCGA-E1-5311                      TCGA-E1-5318 
"DEL PEAK 14(13Q14.13) WILD-TYPE" "DEL PEAK 14(13Q14.13) WILD-TYPE" 
                     TCGA-E1-5319                      TCGA-E1-5322 
"DEL PEAK 14(13Q14.13) WILD-TYPE"   "DEL PEAK 14(13Q14.13) MUTATED" 
                     TCGA-EZ-7264                      TCGA-FG-5962 
"DEL PEAK 14(13Q14.13) WILD-TYPE"   "DEL PEAK 14(13Q14.13) MUTATED" 
                     TCGA-FG-5963                      TCGA-FG-5964 
  "DEL PEAK 14(13Q14.13) MUTATED"   "DEL PEAK 14(13Q14.13) MUTATED" 
                     TCGA-FG-5965                      TCGA-FG-6688 
"DEL PEAK 14(13Q14.13) WILD-TYPE"   "DEL PEAK 14(13Q14.13) MUTATED" 
                     TCGA-FG-6689                      TCGA-FG-6690 
  "DEL PEAK 14(13Q14.13) MUTATED" "DEL PEAK 14(13Q14.13) WILD-TYPE" 
                     TCGA-FG-6691                      TCGA-FG-6692 
"DEL PEAK 14(13Q14.13) WILD-TYPE"   "DEL PEAK 14(13Q14.13) MUTATED" 
                     TCGA-FG-7634                      TCGA-FG-7636 
"DEL PEAK 14(13Q14.13) WILD-TYPE" "DEL PEAK 14(13Q14.13) WILD-TYPE" 
                     TCGA-FG-7638                      TCGA-FG-7643 
"DEL PEAK 14(13Q14.13) WILD-TYPE" "DEL PEAK 14(13Q14.13) WILD-TYPE" 
                     TCGA-FN-7833                      TCGA-HT-7467 
"DEL PEAK 14(13Q14.13) WILD-TYPE" "DEL PEAK 14(13Q14.13) WILD-TYPE" 
                     TCGA-HT-7468                      TCGA-HT-7470 
"DEL PEAK 14(13Q14.13) WILD-TYPE"   "DEL PEAK 14(13Q14.13) MUTATED" 
                     TCGA-HT-7472                      TCGA-HT-7473 
"DEL PEAK 14(13Q14.13) WILD-TYPE" "DEL PEAK 14(13Q14.13) WILD-TYPE" 
                     TCGA-HT-7474                      TCGA-HT-7475 
"DEL PEAK 14(13Q14.13) WILD-TYPE"   "DEL PEAK 14(13Q14.13) MUTATED" 
                     TCGA-HT-7476                      TCGA-HT-7478 
  "DEL PEAK 14(13Q14.13) MUTATED" "DEL PEAK 14(13Q14.13) WILD-TYPE" 
                     TCGA-HT-7479                      TCGA-HT-7480 
"DEL PEAK 14(13Q14.13) WILD-TYPE" "DEL PEAK 14(13Q14.13) WILD-TYPE" 
                     TCGA-HT-7481                      TCGA-HT-7482 
"DEL PEAK 14(13Q14.13) WILD-TYPE"   "DEL PEAK 14(13Q14.13) MUTATED" 
                     TCGA-HT-7483                      TCGA-HT-7485 
  "DEL PEAK 14(13Q14.13) MUTATED" "DEL PEAK 14(13Q14.13) WILD-TYPE" 
                     TCGA-HT-7601                      TCGA-HT-7602 
"DEL PEAK 14(13Q14.13) WILD-TYPE" "DEL PEAK 14(13Q14.13) WILD-TYPE" 
                     TCGA-HT-7603                      TCGA-HT-7604 
"DEL PEAK 14(13Q14.13) WILD-TYPE"   "DEL PEAK 14(13Q14.13) MUTATED" 
                     TCGA-HT-7605                      TCGA-HT-7606 
  "DEL PEAK 14(13Q14.13) MUTATED"   "DEL PEAK 14(13Q14.13) MUTATED" 
                     TCGA-HT-7607                      TCGA-HT-7608 
"DEL PEAK 14(13Q14.13) WILD-TYPE" "DEL PEAK 14(13Q14.13) WILD-TYPE" 
                     TCGA-HT-7609                      TCGA-HT-7610 
"DEL PEAK 14(13Q14.13) WILD-TYPE" "DEL PEAK 14(13Q14.13) WILD-TYPE" 
                     TCGA-HW-7486                      TCGA-HW-7487 
"DEL PEAK 14(13Q14.13) WILD-TYPE" "DEL PEAK 14(13Q14.13) WILD-TYPE" 
                     TCGA-HW-7489                      TCGA-HW-7490 
  "DEL PEAK 14(13Q14.13) MUTATED" "DEL PEAK 14(13Q14.13) WILD-TYPE" 
                     TCGA-HW-7491                      TCGA-HW-7493 
  "DEL PEAK 14(13Q14.13) MUTATED" "DEL PEAK 14(13Q14.13) WILD-TYPE" 
                     TCGA-HW-7495                      TCGA-IK-7675 
"DEL PEAK 14(13Q14.13) WILD-TYPE" "DEL PEAK 14(13Q14.13) WILD-TYPE" 
                     TCGA-IK-8125 
"DEL PEAK 14(13Q14.13) WILD-TYPE" 
[1] "hr=" "1"  
D28V2, continuous
D28V3, binary
[1] "tbl2"
                                 cls
clus                              [,1] [,2]
  DEL PEAK 14(13Q14.13) MUTATED     16   28
  DEL PEAK 14(13Q14.13) WILD-TYPE   46   55
        clus
vv       DEL PEAK 14(13Q14.13) MUTATED DEL PEAK 14(13Q14.13) WILD-TYPE
  FEMALE                            16                              46
  MALE                              28                              55
D28V4, continuous
D28V5, multiclass
                   clus
vv                  DEL PEAK 14(13Q14.13) MUTATED
  ASTROCYTOMA                                  22
  OLIGOASTROCYTOMA                              9
  OLIGODENDROGLIOMA                            13
                   clus
vv                  DEL PEAK 14(13Q14.13) WILD-TYPE
  ASTROCYTOMA                                    28
  OLIGOASTROCYTOMA                               27
  OLIGODENDROGLIOMA                              45
D28V6, binary
[1] "tbl2"
                                 cls
clus                              [,1] [,2]
  DEL PEAK 14(13Q14.13) MUTATED     13   31
  DEL PEAK 14(13Q14.13) WILD-TYPE   46   55
     clus
vv    DEL PEAK 14(13Q14.13) MUTATED DEL PEAK 14(13Q14.13) WILD-TYPE
  NO                             31                              55
  YES                            13                              46
D28V7, binary
[1] "tbl2"
                                 cls
clus                              [,1] [,2]
  DEL PEAK 14(13Q14.13) MUTATED     20   24
  DEL PEAK 14(13Q14.13) WILD-TYPE   54   47
     clus
vv    DEL PEAK 14(13Q14.13) MUTATED DEL PEAK 14(13Q14.13) WILD-TYPE
  NO                             24                              47
  YES                            20                              54

Clustering(29) Variable = Del Peak 15(13q34) mutation analysis
D29V1, survival
                  TCGA-CS-4938                   TCGA-CS-4941 
"DEL PEAK 15(13Q34) WILD-TYPE" "DEL PEAK 15(13Q34) WILD-TYPE" 
                  TCGA-CS-4942                   TCGA-CS-4943 
"DEL PEAK 15(13Q34) WILD-TYPE" "DEL PEAK 15(13Q34) WILD-TYPE" 
                  TCGA-CS-4944                   TCGA-CS-5390 
"DEL PEAK 15(13Q34) WILD-TYPE" "DEL PEAK 15(13Q34) WILD-TYPE" 
                  TCGA-CS-5393                   TCGA-CS-5394 
"DEL PEAK 15(13Q34) WILD-TYPE" "DEL PEAK 15(13Q34) WILD-TYPE" 
                  TCGA-CS-5395                   TCGA-CS-5396 
"DEL PEAK 15(13Q34) WILD-TYPE" "DEL PEAK 15(13Q34) WILD-TYPE" 
                  TCGA-CS-5397                   TCGA-CS-6186 
"DEL PEAK 15(13Q34) WILD-TYPE" "DEL PEAK 15(13Q34) WILD-TYPE" 
                  TCGA-CS-6188                   TCGA-CS-6290 
"DEL PEAK 15(13Q34) WILD-TYPE"   "DEL PEAK 15(13Q34) MUTATED" 
                  TCGA-CS-6665                   TCGA-CS-6666 
"DEL PEAK 15(13Q34) WILD-TYPE"   "DEL PEAK 15(13Q34) MUTATED" 
                  TCGA-CS-6667                   TCGA-CS-6668 
"DEL PEAK 15(13Q34) WILD-TYPE" "DEL PEAK 15(13Q34) WILD-TYPE" 
                  TCGA-CS-6669                   TCGA-CS-6670 
"DEL PEAK 15(13Q34) WILD-TYPE" "DEL PEAK 15(13Q34) WILD-TYPE" 
                  TCGA-DB-5270                   TCGA-DB-5273 
"DEL PEAK 15(13Q34) WILD-TYPE" "DEL PEAK 15(13Q34) WILD-TYPE" 
                  TCGA-DB-5274                   TCGA-DB-5275 
"DEL PEAK 15(13Q34) WILD-TYPE" "DEL PEAK 15(13Q34) WILD-TYPE" 
                  TCGA-DB-5276                   TCGA-DB-5277 
"DEL PEAK 15(13Q34) WILD-TYPE" "DEL PEAK 15(13Q34) WILD-TYPE" 
                  TCGA-DB-5278                   TCGA-DB-5279 
"DEL PEAK 15(13Q34) WILD-TYPE" "DEL PEAK 15(13Q34) WILD-TYPE" 
                  TCGA-DB-5280                   TCGA-DB-5281 
"DEL PEAK 15(13Q34) WILD-TYPE" "DEL PEAK 15(13Q34) WILD-TYPE" 
                  TCGA-DH-5140                   TCGA-DH-5141 
  "DEL PEAK 15(13Q34) MUTATED" "DEL PEAK 15(13Q34) WILD-TYPE" 
                  TCGA-DH-5142                   TCGA-DH-5143 
"DEL PEAK 15(13Q34) WILD-TYPE" "DEL PEAK 15(13Q34) WILD-TYPE" 
                  TCGA-DH-5144                   TCGA-DU-5847 
"DEL PEAK 15(13Q34) WILD-TYPE"   "DEL PEAK 15(13Q34) MUTATED" 
                  TCGA-DU-5849                   TCGA-DU-5851 
"DEL PEAK 15(13Q34) WILD-TYPE" "DEL PEAK 15(13Q34) WILD-TYPE" 
                  TCGA-DU-5852                   TCGA-DU-5853 
"DEL PEAK 15(13Q34) WILD-TYPE" "DEL PEAK 15(13Q34) WILD-TYPE" 
                  TCGA-DU-5854                   TCGA-DU-5855 
"DEL PEAK 15(13Q34) WILD-TYPE" "DEL PEAK 15(13Q34) WILD-TYPE" 
                  TCGA-DU-5870                   TCGA-DU-5871 
"DEL PEAK 15(13Q34) WILD-TYPE"   "DEL PEAK 15(13Q34) MUTATED" 
                  TCGA-DU-5872                   TCGA-DU-5874 
"DEL PEAK 15(13Q34) WILD-TYPE" "DEL PEAK 15(13Q34) WILD-TYPE" 
                  TCGA-DU-6392                   TCGA-DU-6393 
  "DEL PEAK 15(13Q34) MUTATED" "DEL PEAK 15(13Q34) WILD-TYPE" 
                  TCGA-DU-6394                   TCGA-DU-6395 
"DEL PEAK 15(13Q34) WILD-TYPE" "DEL PEAK 15(13Q34) WILD-TYPE" 
                  TCGA-DU-6396                   TCGA-DU-6397 
"DEL PEAK 15(13Q34) WILD-TYPE" "DEL PEAK 15(13Q34) WILD-TYPE" 
                  TCGA-DU-6399                   TCGA-DU-6400 
  "DEL PEAK 15(13Q34) MUTATED"   "DEL PEAK 15(13Q34) MUTATED" 
                  TCGA-DU-6401                   TCGA-DU-6402 
"DEL PEAK 15(13Q34) WILD-TYPE" "DEL PEAK 15(13Q34) WILD-TYPE" 
                  TCGA-DU-6403                   TCGA-DU-6404 
"DEL PEAK 15(13Q34) WILD-TYPE" "DEL PEAK 15(13Q34) WILD-TYPE" 
                  TCGA-DU-6405                   TCGA-DU-6406 
"DEL PEAK 15(13Q34) WILD-TYPE" "DEL PEAK 15(13Q34) WILD-TYPE" 
                  TCGA-DU-6407                   TCGA-DU-6408 
  "DEL PEAK 15(13Q34) MUTATED"   "DEL PEAK 15(13Q34) MUTATED" 
                  TCGA-DU-6410                   TCGA-DU-6542 
"DEL PEAK 15(13Q34) WILD-TYPE" "DEL PEAK 15(13Q34) WILD-TYPE" 
                  TCGA-DU-7006                   TCGA-DU-7007 
  "DEL PEAK 15(13Q34) MUTATED" "DEL PEAK 15(13Q34) WILD-TYPE" 
                  TCGA-DU-7008                   TCGA-DU-7009 
  "DEL PEAK 15(13Q34) MUTATED" "DEL PEAK 15(13Q34) WILD-TYPE" 
                  TCGA-DU-7010                   TCGA-DU-7011 
  "DEL PEAK 15(13Q34) MUTATED" "DEL PEAK 15(13Q34) WILD-TYPE" 
                  TCGA-DU-7012                   TCGA-DU-7013 
"DEL PEAK 15(13Q34) WILD-TYPE" "DEL PEAK 15(13Q34) WILD-TYPE" 
                  TCGA-DU-7014                   TCGA-DU-7015 
"DEL PEAK 15(13Q34) WILD-TYPE" "DEL PEAK 15(13Q34) WILD-TYPE" 
                  TCGA-DU-7018                   TCGA-DU-7019 
"DEL PEAK 15(13Q34) WILD-TYPE" "DEL PEAK 15(13Q34) WILD-TYPE" 
                  TCGA-DU-7290                   TCGA-DU-7292 
  "DEL PEAK 15(13Q34) MUTATED" "DEL PEAK 15(13Q34) WILD-TYPE" 
                  TCGA-DU-7294                   TCGA-DU-7298 
"DEL PEAK 15(13Q34) WILD-TYPE"   "DEL PEAK 15(13Q34) MUTATED" 
                  TCGA-DU-7299                   TCGA-DU-7300 
  "DEL PEAK 15(13Q34) MUTATED" "DEL PEAK 15(13Q34) WILD-TYPE" 
                  TCGA-DU-7301                   TCGA-DU-7302 
"DEL PEAK 15(13Q34) WILD-TYPE" "DEL PEAK 15(13Q34) WILD-TYPE" 
                  TCGA-DU-7304                   TCGA-DU-7306 
"DEL PEAK 15(13Q34) WILD-TYPE" "DEL PEAK 15(13Q34) WILD-TYPE" 
                  TCGA-DU-7309                   TCGA-E1-5302 
"DEL PEAK 15(13Q34) WILD-TYPE" "DEL PEAK 15(13Q34) WILD-TYPE" 
                  TCGA-E1-5303                   TCGA-E1-5304 
  "DEL PEAK 15(13Q34) MUTATED"   "DEL PEAK 15(13Q34) MUTATED" 
                  TCGA-E1-5305                   TCGA-E1-5307 
"DEL PEAK 15(13Q34) WILD-TYPE" "DEL PEAK 15(13Q34) WILD-TYPE" 
                  TCGA-E1-5311                   TCGA-E1-5318 
"DEL PEAK 15(13Q34) WILD-TYPE" "DEL PEAK 15(13Q34) WILD-TYPE" 
                  TCGA-E1-5319                   TCGA-E1-5322 
"DEL PEAK 15(13Q34) WILD-TYPE"   "DEL PEAK 15(13Q34) MUTATED" 
                  TCGA-EZ-7264                   TCGA-FG-5962 
"DEL PEAK 15(13Q34) WILD-TYPE"   "DEL PEAK 15(13Q34) MUTATED" 
                  TCGA-FG-5963                   TCGA-FG-5964 
  "DEL PEAK 15(13Q34) MUTATED"   "DEL PEAK 15(13Q34) MUTATED" 
                  TCGA-FG-5965                   TCGA-FG-6688 
"DEL PEAK 15(13Q34) WILD-TYPE" "DEL PEAK 15(13Q34) WILD-TYPE" 
                  TCGA-FG-6689                   TCGA-FG-6690 
  "DEL PEAK 15(13Q34) MUTATED" "DEL PEAK 15(13Q34) WILD-TYPE" 
                  TCGA-FG-6691                   TCGA-FG-6692 
"DEL PEAK 15(13Q34) WILD-TYPE"   "DEL PEAK 15(13Q34) MUTATED" 
                  TCGA-FG-7634                   TCGA-FG-7636 
"DEL PEAK 15(13Q34) WILD-TYPE" "DEL PEAK 15(13Q34) WILD-TYPE" 
                  TCGA-FG-7638                   TCGA-FG-7643 
"DEL PEAK 15(13Q34) WILD-TYPE" "DEL PEAK 15(13Q34) WILD-TYPE" 
                  TCGA-FN-7833                   TCGA-HT-7467 
"DEL PEAK 15(13Q34) WILD-TYPE" "DEL PEAK 15(13Q34) WILD-TYPE" 
                  TCGA-HT-7468                   TCGA-HT-7470 
"DEL PEAK 15(13Q34) WILD-TYPE"   "DEL PEAK 15(13Q34) MUTATED" 
                  TCGA-HT-7472                   TCGA-HT-7473 
"DEL PEAK 15(13Q34) WILD-TYPE" "DEL PEAK 15(13Q34) WILD-TYPE" 
                  TCGA-HT-7474                   TCGA-HT-7475 
"DEL PEAK 15(13Q34) WILD-TYPE" "DEL PEAK 15(13Q34) WILD-TYPE" 
                  TCGA-HT-7476                   TCGA-HT-7478 
"DEL PEAK 15(13Q34) WILD-TYPE" "DEL PEAK 15(13Q34) WILD-TYPE" 
                  TCGA-HT-7479                   TCGA-HT-7480 
"DEL PEAK 15(13Q34) WILD-TYPE" "DEL PEAK 15(13Q34) WILD-TYPE" 
                  TCGA-HT-7481                   TCGA-HT-7482 
"DEL PEAK 15(13Q34) WILD-TYPE"   "DEL PEAK 15(13Q34) MUTATED" 
                  TCGA-HT-7483                   TCGA-HT-7485 
"DEL PEAK 15(13Q34) WILD-TYPE" "DEL PEAK 15(13Q34) WILD-TYPE" 
                  TCGA-HT-7601                   TCGA-HT-7602 
"DEL PEAK 15(13Q34) WILD-TYPE" "DEL PEAK 15(13Q34) WILD-TYPE" 
                  TCGA-HT-7603                   TCGA-HT-7604 
"DEL PEAK 15(13Q34) WILD-TYPE" "DEL PEAK 15(13Q34) WILD-TYPE" 
                  TCGA-HT-7605                   TCGA-HT-7606 
  "DEL PEAK 15(13Q34) MUTATED"   "DEL PEAK 15(13Q34) MUTATED" 
                  TCGA-HT-7607                   TCGA-HT-7608 
"DEL PEAK 15(13Q34) WILD-TYPE" "DEL PEAK 15(13Q34) WILD-TYPE" 
                  TCGA-HT-7609                   TCGA-HT-7610 
"DEL PEAK 15(13Q34) WILD-TYPE" "DEL PEAK 15(13Q34) WILD-TYPE" 
                  TCGA-HW-7486                   TCGA-HW-7487 
"DEL PEAK 15(13Q34) WILD-TYPE" "DEL PEAK 15(13Q34) WILD-TYPE" 
                  TCGA-HW-7489                   TCGA-HW-7490 
  "DEL PEAK 15(13Q34) MUTATED" "DEL PEAK 15(13Q34) WILD-TYPE" 
                  TCGA-HW-7491                   TCGA-HW-7493 
  "DEL PEAK 15(13Q34) MUTATED" "DEL PEAK 15(13Q34) WILD-TYPE" 
                  TCGA-HW-7495                   TCGA-IK-7675 
"DEL PEAK 15(13Q34) WILD-TYPE"   "DEL PEAK 15(13Q34) MUTATED" 
                  TCGA-IK-8125 
"DEL PEAK 15(13Q34) WILD-TYPE" 
                  TCGA-CS-4938                   TCGA-CS-4941 
"DEL PEAK 15(13Q34) WILD-TYPE" "DEL PEAK 15(13Q34) WILD-TYPE" 
                  TCGA-CS-4942                   TCGA-CS-4943 
"DEL PEAK 15(13Q34) WILD-TYPE" "DEL PEAK 15(13Q34) WILD-TYPE" 
                  TCGA-CS-4944                   TCGA-CS-5390 
"DEL PEAK 15(13Q34) WILD-TYPE" "DEL PEAK 15(13Q34) WILD-TYPE" 
                  TCGA-CS-5393                   TCGA-CS-5394 
"DEL PEAK 15(13Q34) WILD-TYPE" "DEL PEAK 15(13Q34) WILD-TYPE" 
                  TCGA-CS-5395                   TCGA-CS-5396 
"DEL PEAK 15(13Q34) WILD-TYPE" "DEL PEAK 15(13Q34) WILD-TYPE" 
                  TCGA-CS-5397                   TCGA-CS-6186 
"DEL PEAK 15(13Q34) WILD-TYPE" "DEL PEAK 15(13Q34) WILD-TYPE" 
                  TCGA-CS-6188                   TCGA-CS-6290 
"DEL PEAK 15(13Q34) WILD-TYPE"   "DEL PEAK 15(13Q34) MUTATED" 
                  TCGA-CS-6665                   TCGA-CS-6666 
"DEL PEAK 15(13Q34) WILD-TYPE"   "DEL PEAK 15(13Q34) MUTATED" 
                  TCGA-CS-6667                   TCGA-CS-6668 
"DEL PEAK 15(13Q34) WILD-TYPE" "DEL PEAK 15(13Q34) WILD-TYPE" 
                  TCGA-CS-6669                   TCGA-CS-6670 
"DEL PEAK 15(13Q34) WILD-TYPE" "DEL PEAK 15(13Q34) WILD-TYPE" 
                  TCGA-DB-5270                   TCGA-DB-5273 
"DEL PEAK 15(13Q34) WILD-TYPE" "DEL PEAK 15(13Q34) WILD-TYPE" 
                  TCGA-DB-5274                   TCGA-DB-5275 
"DEL PEAK 15(13Q34) WILD-TYPE" "DEL PEAK 15(13Q34) WILD-TYPE" 
                  TCGA-DB-5276                   TCGA-DB-5277 
"DEL PEAK 15(13Q34) WILD-TYPE" "DEL PEAK 15(13Q34) WILD-TYPE" 
                  TCGA-DB-5278                   TCGA-DB-5279 
"DEL PEAK 15(13Q34) WILD-TYPE" "DEL PEAK 15(13Q34) WILD-TYPE" 
                  TCGA-DB-5280                   TCGA-DB-5281 
"DEL PEAK 15(13Q34) WILD-TYPE" "DEL PEAK 15(13Q34) WILD-TYPE" 
                  TCGA-DH-5140                   TCGA-DH-5141 
  "DEL PEAK 15(13Q34) MUTATED" "DEL PEAK 15(13Q34) WILD-TYPE" 
                  TCGA-DH-5142                   TCGA-DH-5143 
"DEL PEAK 15(13Q34) WILD-TYPE" "DEL PEAK 15(13Q34) WILD-TYPE" 
                  TCGA-DH-5144                   TCGA-DU-5847 
"DEL PEAK 15(13Q34) WILD-TYPE"   "DEL PEAK 15(13Q34) MUTATED" 
                  TCGA-DU-5849                   TCGA-DU-5851 
"DEL PEAK 15(13Q34) WILD-TYPE" "DEL PEAK 15(13Q34) WILD-TYPE" 
                  TCGA-DU-5852                   TCGA-DU-5853 
"DEL PEAK 15(13Q34) WILD-TYPE" "DEL PEAK 15(13Q34) WILD-TYPE" 
                  TCGA-DU-5854                   TCGA-DU-5855 
"DEL PEAK 15(13Q34) WILD-TYPE" "DEL PEAK 15(13Q34) WILD-TYPE" 
                  TCGA-DU-5870                   TCGA-DU-5871 
"DEL PEAK 15(13Q34) WILD-TYPE"   "DEL PEAK 15(13Q34) MUTATED" 
                  TCGA-DU-5872                   TCGA-DU-5874 
"DEL PEAK 15(13Q34) WILD-TYPE" "DEL PEAK 15(13Q34) WILD-TYPE" 
                  TCGA-DU-6392                   TCGA-DU-6393 
  "DEL PEAK 15(13Q34) MUTATED" "DEL PEAK 15(13Q34) WILD-TYPE" 
                  TCGA-DU-6394                   TCGA-DU-6395 
"DEL PEAK 15(13Q34) WILD-TYPE" "DEL PEAK 15(13Q34) WILD-TYPE" 
                  TCGA-DU-6396                   TCGA-DU-6397 
"DEL PEAK 15(13Q34) WILD-TYPE" "DEL PEAK 15(13Q34) WILD-TYPE" 
                  TCGA-DU-6399                   TCGA-DU-6400 
  "DEL PEAK 15(13Q34) MUTATED"   "DEL PEAK 15(13Q34) MUTATED" 
                  TCGA-DU-6401                   TCGA-DU-6402 
"DEL PEAK 15(13Q34) WILD-TYPE" "DEL PEAK 15(13Q34) WILD-TYPE" 
                  TCGA-DU-6403                   TCGA-DU-6404 
"DEL PEAK 15(13Q34) WILD-TYPE" "DEL PEAK 15(13Q34) WILD-TYPE" 
                  TCGA-DU-6405                   TCGA-DU-6406 
"DEL PEAK 15(13Q34) WILD-TYPE" "DEL PEAK 15(13Q34) WILD-TYPE" 
                  TCGA-DU-6407                   TCGA-DU-6408 
  "DEL PEAK 15(13Q34) MUTATED"   "DEL PEAK 15(13Q34) MUTATED" 
                  TCGA-DU-6410                   TCGA-DU-6542 
"DEL PEAK 15(13Q34) WILD-TYPE" "DEL PEAK 15(13Q34) WILD-TYPE" 
                  TCGA-DU-7006                   TCGA-DU-7007 
  "DEL PEAK 15(13Q34) MUTATED" "DEL PEAK 15(13Q34) WILD-TYPE" 
                  TCGA-DU-7008                   TCGA-DU-7009 
  "DEL PEAK 15(13Q34) MUTATED" "DEL PEAK 15(13Q34) WILD-TYPE" 
                  TCGA-DU-7010                   TCGA-DU-7011 
  "DEL PEAK 15(13Q34) MUTATED" "DEL PEAK 15(13Q34) WILD-TYPE" 
                  TCGA-DU-7012                   TCGA-DU-7013 
"DEL PEAK 15(13Q34) WILD-TYPE" "DEL PEAK 15(13Q34) WILD-TYPE" 
                  TCGA-DU-7014                   TCGA-DU-7015 
"DEL PEAK 15(13Q34) WILD-TYPE" "DEL PEAK 15(13Q34) WILD-TYPE" 
                  TCGA-DU-7018                   TCGA-DU-7019 
"DEL PEAK 15(13Q34) WILD-TYPE" "DEL PEAK 15(13Q34) WILD-TYPE" 
                  TCGA-DU-7290                   TCGA-DU-7292 
  "DEL PEAK 15(13Q34) MUTATED" "DEL PEAK 15(13Q34) WILD-TYPE" 
                  TCGA-DU-7294                   TCGA-DU-7298 
"DEL PEAK 15(13Q34) WILD-TYPE"   "DEL PEAK 15(13Q34) MUTATED" 
                  TCGA-DU-7299                   TCGA-DU-7300 
  "DEL PEAK 15(13Q34) MUTATED" "DEL PEAK 15(13Q34) WILD-TYPE" 
                  TCGA-DU-7301                   TCGA-DU-7302 
"DEL PEAK 15(13Q34) WILD-TYPE" "DEL PEAK 15(13Q34) WILD-TYPE" 
                  TCGA-DU-7304                   TCGA-DU-7306 
"DEL PEAK 15(13Q34) WILD-TYPE" "DEL PEAK 15(13Q34) WILD-TYPE" 
                  TCGA-DU-7309                   TCGA-E1-5302 
"DEL PEAK 15(13Q34) WILD-TYPE" "DEL PEAK 15(13Q34) WILD-TYPE" 
                  TCGA-E1-5303                   TCGA-E1-5304 
  "DEL PEAK 15(13Q34) MUTATED"   "DEL PEAK 15(13Q34) MUTATED" 
                  TCGA-E1-5305                   TCGA-E1-5307 
"DEL PEAK 15(13Q34) WILD-TYPE" "DEL PEAK 15(13Q34) WILD-TYPE" 
                  TCGA-E1-5311                   TCGA-E1-5318 
"DEL PEAK 15(13Q34) WILD-TYPE" "DEL PEAK 15(13Q34) WILD-TYPE" 
                  TCGA-E1-5319                   TCGA-E1-5322 
"DEL PEAK 15(13Q34) WILD-TYPE"   "DEL PEAK 15(13Q34) MUTATED" 
                  TCGA-EZ-7264                   TCGA-FG-5962 
"DEL PEAK 15(13Q34) WILD-TYPE"   "DEL PEAK 15(13Q34) MUTATED" 
                  TCGA-FG-5963                   TCGA-FG-5964 
  "DEL PEAK 15(13Q34) MUTATED"   "DEL PEAK 15(13Q34) MUTATED" 
                  TCGA-FG-5965                   TCGA-FG-6688 
"DEL PEAK 15(13Q34) WILD-TYPE" "DEL PEAK 15(13Q34) WILD-TYPE" 
                  TCGA-FG-6689                   TCGA-FG-6690 
  "DEL PEAK 15(13Q34) MUTATED" "DEL PEAK 15(13Q34) WILD-TYPE" 
                  TCGA-FG-6691                   TCGA-FG-6692 
"DEL PEAK 15(13Q34) WILD-TYPE"   "DEL PEAK 15(13Q34) MUTATED" 
                  TCGA-FG-7634                   TCGA-FG-7636 
"DEL PEAK 15(13Q34) WILD-TYPE" "DEL PEAK 15(13Q34) WILD-TYPE" 
                  TCGA-FG-7638                   TCGA-FG-7643 
"DEL PEAK 15(13Q34) WILD-TYPE" "DEL PEAK 15(13Q34) WILD-TYPE" 
                  TCGA-FN-7833                   TCGA-HT-7467 
"DEL PEAK 15(13Q34) WILD-TYPE" "DEL PEAK 15(13Q34) WILD-TYPE" 
                  TCGA-HT-7468                   TCGA-HT-7470 
"DEL PEAK 15(13Q34) WILD-TYPE"   "DEL PEAK 15(13Q34) MUTATED" 
                  TCGA-HT-7472                   TCGA-HT-7473 
"DEL PEAK 15(13Q34) WILD-TYPE" "DEL PEAK 15(13Q34) WILD-TYPE" 
                  TCGA-HT-7474                   TCGA-HT-7475 
"DEL PEAK 15(13Q34) WILD-TYPE" "DEL PEAK 15(13Q34) WILD-TYPE" 
                  TCGA-HT-7476                   TCGA-HT-7478 
"DEL PEAK 15(13Q34) WILD-TYPE" "DEL PEAK 15(13Q34) WILD-TYPE" 
                  TCGA-HT-7479                   TCGA-HT-7480 
"DEL PEAK 15(13Q34) WILD-TYPE" "DEL PEAK 15(13Q34) WILD-TYPE" 
                  TCGA-HT-7481                   TCGA-HT-7482 
"DEL PEAK 15(13Q34) WILD-TYPE"   "DEL PEAK 15(13Q34) MUTATED" 
                  TCGA-HT-7483                   TCGA-HT-7485 
"DEL PEAK 15(13Q34) WILD-TYPE" "DEL PEAK 15(13Q34) WILD-TYPE" 
                  TCGA-HT-7601                   TCGA-HT-7602 
"DEL PEAK 15(13Q34) WILD-TYPE" "DEL PEAK 15(13Q34) WILD-TYPE" 
                  TCGA-HT-7603                   TCGA-HT-7604 
"DEL PEAK 15(13Q34) WILD-TYPE" "DEL PEAK 15(13Q34) WILD-TYPE" 
                  TCGA-HT-7605                   TCGA-HT-7606 
  "DEL PEAK 15(13Q34) MUTATED"   "DEL PEAK 15(13Q34) MUTATED" 
                  TCGA-HT-7607                   TCGA-HT-7608 
"DEL PEAK 15(13Q34) WILD-TYPE" "DEL PEAK 15(13Q34) WILD-TYPE" 
                  TCGA-HT-7609                   TCGA-HT-7610 
"DEL PEAK 15(13Q34) WILD-TYPE" "DEL PEAK 15(13Q34) WILD-TYPE" 
                  TCGA-HW-7486                   TCGA-HW-7487 
"DEL PEAK 15(13Q34) WILD-TYPE" "DEL PEAK 15(13Q34) WILD-TYPE" 
                  TCGA-HW-7489                   TCGA-HW-7490 
  "DEL PEAK 15(13Q34) MUTATED" "DEL PEAK 15(13Q34) WILD-TYPE" 
                  TCGA-HW-7491                   TCGA-HW-7493 
  "DEL PEAK 15(13Q34) MUTATED" "DEL PEAK 15(13Q34) WILD-TYPE" 
                  TCGA-HW-7495                   TCGA-IK-7675 
"DEL PEAK 15(13Q34) WILD-TYPE"   "DEL PEAK 15(13Q34) MUTATED" 
                  TCGA-IK-8125 
"DEL PEAK 15(13Q34) WILD-TYPE" 
                  TCGA-CS-4938                   TCGA-CS-4941 
"DEL PEAK 15(13Q34) WILD-TYPE" "DEL PEAK 15(13Q34) WILD-TYPE" 
                  TCGA-CS-4942                   TCGA-CS-4943 
"DEL PEAK 15(13Q34) WILD-TYPE" "DEL PEAK 15(13Q34) WILD-TYPE" 
                  TCGA-CS-4944                   TCGA-CS-5390 
"DEL PEAK 15(13Q34) WILD-TYPE" "DEL PEAK 15(13Q34) WILD-TYPE" 
                  TCGA-CS-5393                   TCGA-CS-5394 
"DEL PEAK 15(13Q34) WILD-TYPE" "DEL PEAK 15(13Q34) WILD-TYPE" 
                  TCGA-CS-5395                   TCGA-CS-5396 
"DEL PEAK 15(13Q34) WILD-TYPE" "DEL PEAK 15(13Q34) WILD-TYPE" 
                  TCGA-CS-5397                   TCGA-CS-6186 
"DEL PEAK 15(13Q34) WILD-TYPE" "DEL PEAK 15(13Q34) WILD-TYPE" 
                  TCGA-CS-6188                   TCGA-CS-6290 
"DEL PEAK 15(13Q34) WILD-TYPE"   "DEL PEAK 15(13Q34) MUTATED" 
                  TCGA-CS-6665                   TCGA-CS-6666 
"DEL PEAK 15(13Q34) WILD-TYPE"   "DEL PEAK 15(13Q34) MUTATED" 
                  TCGA-CS-6667                   TCGA-CS-6668 
"DEL PEAK 15(13Q34) WILD-TYPE" "DEL PEAK 15(13Q34) WILD-TYPE" 
                  TCGA-CS-6669                   TCGA-CS-6670 
"DEL PEAK 15(13Q34) WILD-TYPE" "DEL PEAK 15(13Q34) WILD-TYPE" 
                  TCGA-DB-5270                   TCGA-DB-5273 
"DEL PEAK 15(13Q34) WILD-TYPE" "DEL PEAK 15(13Q34) WILD-TYPE" 
                  TCGA-DB-5274                   TCGA-DB-5275 
"DEL PEAK 15(13Q34) WILD-TYPE" "DEL PEAK 15(13Q34) WILD-TYPE" 
                  TCGA-DB-5276                   TCGA-DB-5277 
"DEL PEAK 15(13Q34) WILD-TYPE" "DEL PEAK 15(13Q34) WILD-TYPE" 
                  TCGA-DB-5278                   TCGA-DB-5279 
"DEL PEAK 15(13Q34) WILD-TYPE" "DEL PEAK 15(13Q34) WILD-TYPE" 
                  TCGA-DB-5280                   TCGA-DB-5281 
"DEL PEAK 15(13Q34) WILD-TYPE" "DEL PEAK 15(13Q34) WILD-TYPE" 
                  TCGA-DH-5140                   TCGA-DH-5141 
  "DEL PEAK 15(13Q34) MUTATED" "DEL PEAK 15(13Q34) WILD-TYPE" 
                  TCGA-DH-5142                   TCGA-DH-5143 
"DEL PEAK 15(13Q34) WILD-TYPE" "DEL PEAK 15(13Q34) WILD-TYPE" 
                  TCGA-DH-5144                   TCGA-DU-5847 
"DEL PEAK 15(13Q34) WILD-TYPE"   "DEL PEAK 15(13Q34) MUTATED" 
                  TCGA-DU-5849                   TCGA-DU-5851 
"DEL PEAK 15(13Q34) WILD-TYPE" "DEL PEAK 15(13Q34) WILD-TYPE" 
                  TCGA-DU-5852                   TCGA-DU-5853 
"DEL PEAK 15(13Q34) WILD-TYPE" "DEL PEAK 15(13Q34) WILD-TYPE" 
                  TCGA-DU-5854                   TCGA-DU-5855 
"DEL PEAK 15(13Q34) WILD-TYPE" "DEL PEAK 15(13Q34) WILD-TYPE" 
                  TCGA-DU-5870                   TCGA-DU-5871 
"DEL PEAK 15(13Q34) WILD-TYPE"   "DEL PEAK 15(13Q34) MUTATED" 
                  TCGA-DU-5872                   TCGA-DU-5874 
"DEL PEAK 15(13Q34) WILD-TYPE" "DEL PEAK 15(13Q34) WILD-TYPE" 
                  TCGA-DU-6392                   TCGA-DU-6393 
  "DEL PEAK 15(13Q34) MUTATED" "DEL PEAK 15(13Q34) WILD-TYPE" 
                  TCGA-DU-6394                   TCGA-DU-6395 
"DEL PEAK 15(13Q34) WILD-TYPE" "DEL PEAK 15(13Q34) WILD-TYPE" 
                  TCGA-DU-6396                   TCGA-DU-6397 
"DEL PEAK 15(13Q34) WILD-TYPE" "DEL PEAK 15(13Q34) WILD-TYPE" 
                  TCGA-DU-6399                   TCGA-DU-6400 
  "DEL PEAK 15(13Q34) MUTATED"   "DEL PEAK 15(13Q34) MUTATED" 
                  TCGA-DU-6401                   TCGA-DU-6402 
"DEL PEAK 15(13Q34) WILD-TYPE" "DEL PEAK 15(13Q34) WILD-TYPE" 
                  TCGA-DU-6403                   TCGA-DU-6404 
"DEL PEAK 15(13Q34) WILD-TYPE" "DEL PEAK 15(13Q34) WILD-TYPE" 
                  TCGA-DU-6405                   TCGA-DU-6406 
"DEL PEAK 15(13Q34) WILD-TYPE" "DEL PEAK 15(13Q34) WILD-TYPE" 
                  TCGA-DU-6407                   TCGA-DU-6408 
  "DEL PEAK 15(13Q34) MUTATED"   "DEL PEAK 15(13Q34) MUTATED" 
                  TCGA-DU-6410                   TCGA-DU-6542 
"DEL PEAK 15(13Q34) WILD-TYPE" "DEL PEAK 15(13Q34) WILD-TYPE" 
                  TCGA-DU-7006                   TCGA-DU-7007 
  "DEL PEAK 15(13Q34) MUTATED" "DEL PEAK 15(13Q34) WILD-TYPE" 
                  TCGA-DU-7008                   TCGA-DU-7009 
  "DEL PEAK 15(13Q34) MUTATED" "DEL PEAK 15(13Q34) WILD-TYPE" 
                  TCGA-DU-7010                   TCGA-DU-7011 
  "DEL PEAK 15(13Q34) MUTATED" "DEL PEAK 15(13Q34) WILD-TYPE" 
                  TCGA-DU-7012                   TCGA-DU-7013 
"DEL PEAK 15(13Q34) WILD-TYPE" "DEL PEAK 15(13Q34) WILD-TYPE" 
                  TCGA-DU-7014                   TCGA-DU-7015 
"DEL PEAK 15(13Q34) WILD-TYPE" "DEL PEAK 15(13Q34) WILD-TYPE" 
                  TCGA-DU-7018                   TCGA-DU-7019 
"DEL PEAK 15(13Q34) WILD-TYPE" "DEL PEAK 15(13Q34) WILD-TYPE" 
                  TCGA-DU-7290                   TCGA-DU-7292 
  "DEL PEAK 15(13Q34) MUTATED" "DEL PEAK 15(13Q34) WILD-TYPE" 
                  TCGA-DU-7294                   TCGA-DU-7298 
"DEL PEAK 15(13Q34) WILD-TYPE"   "DEL PEAK 15(13Q34) MUTATED" 
                  TCGA-DU-7299                   TCGA-DU-7300 
  "DEL PEAK 15(13Q34) MUTATED" "DEL PEAK 15(13Q34) WILD-TYPE" 
                  TCGA-DU-7301                   TCGA-DU-7302 
"DEL PEAK 15(13Q34) WILD-TYPE" "DEL PEAK 15(13Q34) WILD-TYPE" 
                  TCGA-DU-7304                   TCGA-DU-7306 
"DEL PEAK 15(13Q34) WILD-TYPE" "DEL PEAK 15(13Q34) WILD-TYPE" 
                  TCGA-DU-7309                   TCGA-E1-5302 
"DEL PEAK 15(13Q34) WILD-TYPE" "DEL PEAK 15(13Q34) WILD-TYPE" 
                  TCGA-E1-5303                   TCGA-E1-5304 
  "DEL PEAK 15(13Q34) MUTATED"   "DEL PEAK 15(13Q34) MUTATED" 
                  TCGA-E1-5305                   TCGA-E1-5307 
"DEL PEAK 15(13Q34) WILD-TYPE" "DEL PEAK 15(13Q34) WILD-TYPE" 
                  TCGA-E1-5311                   TCGA-E1-5318 
"DEL PEAK 15(13Q34) WILD-TYPE" "DEL PEAK 15(13Q34) WILD-TYPE" 
                  TCGA-E1-5319                   TCGA-E1-5322 
"DEL PEAK 15(13Q34) WILD-TYPE"   "DEL PEAK 15(13Q34) MUTATED" 
                  TCGA-EZ-7264                   TCGA-FG-5962 
"DEL PEAK 15(13Q34) WILD-TYPE"   "DEL PEAK 15(13Q34) MUTATED" 
                  TCGA-FG-5963                   TCGA-FG-5964 
  "DEL PEAK 15(13Q34) MUTATED"   "DEL PEAK 15(13Q34) MUTATED" 
                  TCGA-FG-5965                   TCGA-FG-6688 
"DEL PEAK 15(13Q34) WILD-TYPE" "DEL PEAK 15(13Q34) WILD-TYPE" 
                  TCGA-FG-6689                   TCGA-FG-6690 
  "DEL PEAK 15(13Q34) MUTATED" "DEL PEAK 15(13Q34) WILD-TYPE" 
                  TCGA-FG-6691                   TCGA-FG-6692 
"DEL PEAK 15(13Q34) WILD-TYPE"   "DEL PEAK 15(13Q34) MUTATED" 
                  TCGA-FG-7634                   TCGA-FG-7636 
"DEL PEAK 15(13Q34) WILD-TYPE" "DEL PEAK 15(13Q34) WILD-TYPE" 
                  TCGA-FG-7638                   TCGA-FG-7643 
"DEL PEAK 15(13Q34) WILD-TYPE" "DEL PEAK 15(13Q34) WILD-TYPE" 
                  TCGA-FN-7833                   TCGA-HT-7467 
"DEL PEAK 15(13Q34) WILD-TYPE" "DEL PEAK 15(13Q34) WILD-TYPE" 
                  TCGA-HT-7468                   TCGA-HT-7470 
"DEL PEAK 15(13Q34) WILD-TYPE"   "DEL PEAK 15(13Q34) MUTATED" 
                  TCGA-HT-7472                   TCGA-HT-7473 
"DEL PEAK 15(13Q34) WILD-TYPE" "DEL PEAK 15(13Q34) WILD-TYPE" 
                  TCGA-HT-7474                   TCGA-HT-7475 
"DEL PEAK 15(13Q34) WILD-TYPE" "DEL PEAK 15(13Q34) WILD-TYPE" 
                  TCGA-HT-7476                   TCGA-HT-7478 
"DEL PEAK 15(13Q34) WILD-TYPE" "DEL PEAK 15(13Q34) WILD-TYPE" 
                  TCGA-HT-7479                   TCGA-HT-7480 
"DEL PEAK 15(13Q34) WILD-TYPE" "DEL PEAK 15(13Q34) WILD-TYPE" 
                  TCGA-HT-7481                   TCGA-HT-7482 
"DEL PEAK 15(13Q34) WILD-TYPE"   "DEL PEAK 15(13Q34) MUTATED" 
                  TCGA-HT-7483                   TCGA-HT-7485 
"DEL PEAK 15(13Q34) WILD-TYPE" "DEL PEAK 15(13Q34) WILD-TYPE" 
                  TCGA-HT-7601                   TCGA-HT-7602 
"DEL PEAK 15(13Q34) WILD-TYPE" "DEL PEAK 15(13Q34) WILD-TYPE" 
                  TCGA-HT-7603                   TCGA-HT-7604 
"DEL PEAK 15(13Q34) WILD-TYPE" "DEL PEAK 15(13Q34) WILD-TYPE" 
                  TCGA-HT-7605                   TCGA-HT-7606 
  "DEL PEAK 15(13Q34) MUTATED"   "DEL PEAK 15(13Q34) MUTATED" 
                  TCGA-HT-7607                   TCGA-HT-7608 
"DEL PEAK 15(13Q34) WILD-TYPE" "DEL PEAK 15(13Q34) WILD-TYPE" 
                  TCGA-HT-7609                   TCGA-HT-7610 
"DEL PEAK 15(13Q34) WILD-TYPE" "DEL PEAK 15(13Q34) WILD-TYPE" 
                  TCGA-HW-7486                   TCGA-HW-7487 
"DEL PEAK 15(13Q34) WILD-TYPE" "DEL PEAK 15(13Q34) WILD-TYPE" 
                  TCGA-HW-7489                   TCGA-HW-7490 
  "DEL PEAK 15(13Q34) MUTATED" "DEL PEAK 15(13Q34) WILD-TYPE" 
                  TCGA-HW-7491                   TCGA-HW-7493 
  "DEL PEAK 15(13Q34) MUTATED" "DEL PEAK 15(13Q34) WILD-TYPE" 
                  TCGA-HW-7495                   TCGA-IK-7675 
"DEL PEAK 15(13Q34) WILD-TYPE"   "DEL PEAK 15(13Q34) MUTATED" 
                  TCGA-IK-8125 
"DEL PEAK 15(13Q34) WILD-TYPE" 
[1] "hr=" "1.3"
D29V2, continuous
D29V3, binary
[1] "tbl2"
                              cls
clus                           [,1] [,2]
  DEL PEAK 15(13Q34) MUTATED     15   16
  DEL PEAK 15(13Q34) WILD-TYPE   47   67
        clus
vv       DEL PEAK 15(13Q34) MUTATED DEL PEAK 15(13Q34) WILD-TYPE
  FEMALE                         15                           47
  MALE                           16                           67
D29V4, continuous
D29V5, multiclass
                   clus
vv                  DEL PEAK 15(13Q34) MUTATED DEL PEAK 15(13Q34) WILD-TYPE
  ASTROCYTOMA                               14                           36
  OLIGOASTROCYTOMA                           5                           31
  OLIGODENDROGLIOMA                         12                           46
D29V6, binary
[1] "tbl2"
                              cls
clus                           [,1] [,2]
  DEL PEAK 15(13Q34) MUTATED      7   24
  DEL PEAK 15(13Q34) WILD-TYPE   52   62
     clus
vv    DEL PEAK 15(13Q34) MUTATED DEL PEAK 15(13Q34) WILD-TYPE
  NO                          24                           62
  YES                          7                           52
D29V7, binary
[1] "tbl2"
                              cls
clus                           [,1] [,2]
  DEL PEAK 15(13Q34) MUTATED     17   14
  DEL PEAK 15(13Q34) WILD-TYPE   57   57
     clus
vv    DEL PEAK 15(13Q34) MUTATED DEL PEAK 15(13Q34) WILD-TYPE
  NO                          14                           57
  YES                         17                           57

Clustering(30) Variable = Del Peak 16(14q24.3) mutation analysis
D30V1, survival
                    TCGA-CS-4938                     TCGA-CS-4941 
  "DEL PEAK 16(14Q24.3) MUTATED"   "DEL PEAK 16(14Q24.3) MUTATED" 
                    TCGA-CS-4942                     TCGA-CS-4943 
  "DEL PEAK 16(14Q24.3) MUTATED" "DEL PEAK 16(14Q24.3) WILD-TYPE" 
                    TCGA-CS-4944                     TCGA-CS-5390 
  "DEL PEAK 16(14Q24.3) MUTATED" "DEL PEAK 16(14Q24.3) WILD-TYPE" 
                    TCGA-CS-5393                     TCGA-CS-5394 
"DEL PEAK 16(14Q24.3) WILD-TYPE" "DEL PEAK 16(14Q24.3) WILD-TYPE" 
                    TCGA-CS-5395                     TCGA-CS-5396 
"DEL PEAK 16(14Q24.3) WILD-TYPE" "DEL PEAK 16(14Q24.3) WILD-TYPE" 
                    TCGA-CS-5397                     TCGA-CS-6186 
"DEL PEAK 16(14Q24.3) WILD-TYPE" "DEL PEAK 16(14Q24.3) WILD-TYPE" 
                    TCGA-CS-6188                     TCGA-CS-6290 
"DEL PEAK 16(14Q24.3) WILD-TYPE" "DEL PEAK 16(14Q24.3) WILD-TYPE" 
                    TCGA-CS-6665                     TCGA-CS-6666 
"DEL PEAK 16(14Q24.3) WILD-TYPE" "DEL PEAK 16(14Q24.3) WILD-TYPE" 
                    TCGA-CS-6667                     TCGA-CS-6668 
"DEL PEAK 16(14Q24.3) WILD-TYPE"   "DEL PEAK 16(14Q24.3) MUTATED" 
                    TCGA-CS-6669                     TCGA-CS-6670 
"DEL PEAK 16(14Q24.3) WILD-TYPE" "DEL PEAK 16(14Q24.3) WILD-TYPE" 
                    TCGA-DB-5270                     TCGA-DB-5273 
"DEL PEAK 16(14Q24.3) WILD-TYPE" "DEL PEAK 16(14Q24.3) WILD-TYPE" 
                    TCGA-DB-5274                     TCGA-DB-5275 
"DEL PEAK 16(14Q24.3) WILD-TYPE" "DEL PEAK 16(14Q24.3) WILD-TYPE" 
                    TCGA-DB-5276                     TCGA-DB-5277 
"DEL PEAK 16(14Q24.3) WILD-TYPE" "DEL PEAK 16(14Q24.3) WILD-TYPE" 
                    TCGA-DB-5278                     TCGA-DB-5279 
"DEL PEAK 16(14Q24.3) WILD-TYPE"   "DEL PEAK 16(14Q24.3) MUTATED" 
                    TCGA-DB-5280                     TCGA-DB-5281 
"DEL PEAK 16(14Q24.3) WILD-TYPE" "DEL PEAK 16(14Q24.3) WILD-TYPE" 
                    TCGA-DH-5140                     TCGA-DH-5141 
  "DEL PEAK 16(14Q24.3) MUTATED" "DEL PEAK 16(14Q24.3) WILD-TYPE" 
                    TCGA-DH-5142                     TCGA-DH-5143 
  "DEL PEAK 16(14Q24.3) MUTATED"   "DEL PEAK 16(14Q24.3) MUTATED" 
                    TCGA-DH-5144                     TCGA-DU-5847 
"DEL PEAK 16(14Q24.3) WILD-TYPE"   "DEL PEAK 16(14Q24.3) MUTATED" 
                    TCGA-DU-5849                     TCGA-DU-5851 
"DEL PEAK 16(14Q24.3) WILD-TYPE" "DEL PEAK 16(14Q24.3) WILD-TYPE" 
                    TCGA-DU-5852                     TCGA-DU-5853 
  "DEL PEAK 16(14Q24.3) MUTATED" "DEL PEAK 16(14Q24.3) WILD-TYPE" 
                    TCGA-DU-5854                     TCGA-DU-5855 
"DEL PEAK 16(14Q24.3) WILD-TYPE"   "DEL PEAK 16(14Q24.3) MUTATED" 
                    TCGA-DU-5870                     TCGA-DU-5871 
"DEL PEAK 16(14Q24.3) WILD-TYPE" "DEL PEAK 16(14Q24.3) WILD-TYPE" 
                    TCGA-DU-5872                     TCGA-DU-5874 
  "DEL PEAK 16(14Q24.3) MUTATED" "DEL PEAK 16(14Q24.3) WILD-TYPE" 
                    TCGA-DU-6392                     TCGA-DU-6393 
"DEL PEAK 16(14Q24.3) WILD-TYPE" "DEL PEAK 16(14Q24.3) WILD-TYPE" 
                    TCGA-DU-6394                     TCGA-DU-6395 
"DEL PEAK 16(14Q24.3) WILD-TYPE" "DEL PEAK 16(14Q24.3) WILD-TYPE" 
                    TCGA-DU-6396                     TCGA-DU-6397 
  "DEL PEAK 16(14Q24.3) MUTATED"   "DEL PEAK 16(14Q24.3) MUTATED" 
                    TCGA-DU-6399                     TCGA-DU-6400 
  "DEL PEAK 16(14Q24.3) MUTATED" "DEL PEAK 16(14Q24.3) WILD-TYPE" 
                    TCGA-DU-6401                     TCGA-DU-6402 
"DEL PEAK 16(14Q24.3) WILD-TYPE" "DEL PEAK 16(14Q24.3) WILD-TYPE" 
                    TCGA-DU-6403                     TCGA-DU-6404 
  "DEL PEAK 16(14Q24.3) MUTATED" "DEL PEAK 16(14Q24.3) WILD-TYPE" 
                    TCGA-DU-6405                     TCGA-DU-6406 
"DEL PEAK 16(14Q24.3) WILD-TYPE" "DEL PEAK 16(14Q24.3) WILD-TYPE" 
                    TCGA-DU-6407                     TCGA-DU-6408 
"DEL PEAK 16(14Q24.3) WILD-TYPE"   "DEL PEAK 16(14Q24.3) MUTATED" 
                    TCGA-DU-6410                     TCGA-DU-6542 
"DEL PEAK 16(14Q24.3) WILD-TYPE"   "DEL PEAK 16(14Q24.3) MUTATED" 
                    TCGA-DU-7006                     TCGA-DU-7007 
"DEL PEAK 16(14Q24.3) WILD-TYPE"   "DEL PEAK 16(14Q24.3) MUTATED" 
                    TCGA-DU-7008                     TCGA-DU-7009 
"DEL PEAK 16(14Q24.3) WILD-TYPE" "DEL PEAK 16(14Q24.3) WILD-TYPE" 
                    TCGA-DU-7010                     TCGA-DU-7011 
  "DEL PEAK 16(14Q24.3) MUTATED" "DEL PEAK 16(14Q24.3) WILD-TYPE" 
                    TCGA-DU-7012                     TCGA-DU-7013 
  "DEL PEAK 16(14Q24.3) MUTATED" "DEL PEAK 16(14Q24.3) WILD-TYPE" 
                    TCGA-DU-7014                     TCGA-DU-7015 
"DEL PEAK 16(14Q24.3) WILD-TYPE" "DEL PEAK 16(14Q24.3) WILD-TYPE" 
                    TCGA-DU-7018                     TCGA-DU-7019 
"DEL PEAK 16(14Q24.3) WILD-TYPE"   "DEL PEAK 16(14Q24.3) MUTATED" 
                    TCGA-DU-7290                     TCGA-DU-7292 
  "DEL PEAK 16(14Q24.3) MUTATED" "DEL PEAK 16(14Q24.3) WILD-TYPE" 
                    TCGA-DU-7294                     TCGA-DU-7298 
"DEL PEAK 16(14Q24.3) WILD-TYPE"   "DEL PEAK 16(14Q24.3) MUTATED" 
                    TCGA-DU-7299                     TCGA-DU-7300 
"DEL PEAK 16(14Q24.3) WILD-TYPE" "DEL PEAK 16(14Q24.3) WILD-TYPE" 
                    TCGA-DU-7301                     TCGA-DU-7302 
"DEL PEAK 16(14Q24.3) WILD-TYPE"   "DEL PEAK 16(14Q24.3) MUTATED" 
                    TCGA-DU-7304                     TCGA-DU-7306 
"DEL PEAK 16(14Q24.3) WILD-TYPE" "DEL PEAK 16(14Q24.3) WILD-TYPE" 
                    TCGA-DU-7309                     TCGA-E1-5302 
"DEL PEAK 16(14Q24.3) WILD-TYPE" "DEL PEAK 16(14Q24.3) WILD-TYPE" 
                    TCGA-E1-5303                     TCGA-E1-5304 
"DEL PEAK 16(14Q24.3) WILD-TYPE"   "DEL PEAK 16(14Q24.3) MUTATED" 
                    TCGA-E1-5305                     TCGA-E1-5307 
  "DEL PEAK 16(14Q24.3) MUTATED"   "DEL PEAK 16(14Q24.3) MUTATED" 
                    TCGA-E1-5311                     TCGA-E1-5318 
"DEL PEAK 16(14Q24.3) WILD-TYPE" "DEL PEAK 16(14Q24.3) WILD-TYPE" 
                    TCGA-E1-5319                     TCGA-E1-5322 
  "DEL PEAK 16(14Q24.3) MUTATED"   "DEL PEAK 16(14Q24.3) MUTATED" 
                    TCGA-EZ-7264                     TCGA-FG-5962 
  "DEL PEAK 16(14Q24.3) MUTATED" "DEL PEAK 16(14Q24.3) WILD-TYPE" 
                    TCGA-FG-5963                     TCGA-FG-5964 
  "DEL PEAK 16(14Q24.3) MUTATED" "DEL PEAK 16(14Q24.3) WILD-TYPE" 
                    TCGA-FG-5965                     TCGA-FG-6688 
"DEL PEAK 16(14Q24.3) WILD-TYPE" "DEL PEAK 16(14Q24.3) WILD-TYPE" 
                    TCGA-FG-6689                     TCGA-FG-6690 
"DEL PEAK 16(14Q24.3) WILD-TYPE" "DEL PEAK 16(14Q24.3) WILD-TYPE" 
                    TCGA-FG-6691                     TCGA-FG-6692 
"DEL PEAK 16(14Q24.3) WILD-TYPE" "DEL PEAK 16(14Q24.3) WILD-TYPE" 
                    TCGA-FG-7634                     TCGA-FG-7636 
"DEL PEAK 16(14Q24.3) WILD-TYPE" "DEL PEAK 16(14Q24.3) WILD-TYPE" 
                    TCGA-FG-7638                     TCGA-FG-7643 
"DEL PEAK 16(14Q24.3) WILD-TYPE"   "DEL PEAK 16(14Q24.3) MUTATED" 
                    TCGA-FN-7833                     TCGA-HT-7467 
"DEL PEAK 16(14Q24.3) WILD-TYPE" "DEL PEAK 16(14Q24.3) WILD-TYPE" 
                    TCGA-HT-7468                     TCGA-HT-7470 
"DEL PEAK 16(14Q24.3) WILD-TYPE" "DEL PEAK 16(14Q24.3) WILD-TYPE" 
                    TCGA-HT-7472                     TCGA-HT-7473 
"DEL PEAK 16(14Q24.3) WILD-TYPE" "DEL PEAK 16(14Q24.3) WILD-TYPE" 
                    TCGA-HT-7474                     TCGA-HT-7475 
"DEL PEAK 16(14Q24.3) WILD-TYPE" "DEL PEAK 16(14Q24.3) WILD-TYPE" 
                    TCGA-HT-7476                     TCGA-HT-7478 
"DEL PEAK 16(14Q24.3) WILD-TYPE" "DEL PEAK 16(14Q24.3) WILD-TYPE" 
                    TCGA-HT-7479                     TCGA-HT-7480 
"DEL PEAK 16(14Q24.3) WILD-TYPE" "DEL PEAK 16(14Q24.3) WILD-TYPE" 
                    TCGA-HT-7481                     TCGA-HT-7482 
"DEL PEAK 16(14Q24.3) WILD-TYPE" "DEL PEAK 16(14Q24.3) WILD-TYPE" 
                    TCGA-HT-7483                     TCGA-HT-7485 
"DEL PEAK 16(14Q24.3) WILD-TYPE" "DEL PEAK 16(14Q24.3) WILD-TYPE" 
                    TCGA-HT-7601                     TCGA-HT-7602 
"DEL PEAK 16(14Q24.3) WILD-TYPE" "DEL PEAK 16(14Q24.3) WILD-TYPE" 
                    TCGA-HT-7603                     TCGA-HT-7604 
  "DEL PEAK 16(14Q24.3) MUTATED" "DEL PEAK 16(14Q24.3) WILD-TYPE" 
                    TCGA-HT-7605                     TCGA-HT-7606 
"DEL PEAK 16(14Q24.3) WILD-TYPE"   "DEL PEAK 16(14Q24.3) MUTATED" 
                    TCGA-HT-7607                     TCGA-HT-7608 
"DEL PEAK 16(14Q24.3) WILD-TYPE" "DEL PEAK 16(14Q24.3) WILD-TYPE" 
                    TCGA-HT-7609                     TCGA-HT-7610 
"DEL PEAK 16(14Q24.3) WILD-TYPE" "DEL PEAK 16(14Q24.3) WILD-TYPE" 
                    TCGA-HW-7486                     TCGA-HW-7487 
"DEL PEAK 16(14Q24.3) WILD-TYPE" "DEL PEAK 16(14Q24.3) WILD-TYPE" 
                    TCGA-HW-7489                     TCGA-HW-7490 
  "DEL PEAK 16(14Q24.3) MUTATED" "DEL PEAK 16(14Q24.3) WILD-TYPE" 
                    TCGA-HW-7491                     TCGA-HW-7493 
"DEL PEAK 16(14Q24.3) WILD-TYPE" "DEL PEAK 16(14Q24.3) WILD-TYPE" 
                    TCGA-HW-7495                     TCGA-IK-7675 
"DEL PEAK 16(14Q24.3) WILD-TYPE" "DEL PEAK 16(14Q24.3) WILD-TYPE" 
                    TCGA-IK-8125 
  "DEL PEAK 16(14Q24.3) MUTATED" 
                    TCGA-CS-4938                     TCGA-CS-4941 
  "DEL PEAK 16(14Q24.3) MUTATED"   "DEL PEAK 16(14Q24.3) MUTATED" 
                    TCGA-CS-4942                     TCGA-CS-4943 
  "DEL PEAK 16(14Q24.3) MUTATED" "DEL PEAK 16(14Q24.3) WILD-TYPE" 
                    TCGA-CS-4944                     TCGA-CS-5390 
  "DEL PEAK 16(14Q24.3) MUTATED" "DEL PEAK 16(14Q24.3) WILD-TYPE" 
                    TCGA-CS-5393                     TCGA-CS-5394 
"DEL PEAK 16(14Q24.3) WILD-TYPE" "DEL PEAK 16(14Q24.3) WILD-TYPE" 
                    TCGA-CS-5395                     TCGA-CS-5396 
"DEL PEAK 16(14Q24.3) WILD-TYPE" "DEL PEAK 16(14Q24.3) WILD-TYPE" 
                    TCGA-CS-5397                     TCGA-CS-6186 
"DEL PEAK 16(14Q24.3) WILD-TYPE" "DEL PEAK 16(14Q24.3) WILD-TYPE" 
                    TCGA-CS-6188                     TCGA-CS-6290 
"DEL PEAK 16(14Q24.3) WILD-TYPE" "DEL PEAK 16(14Q24.3) WILD-TYPE" 
                    TCGA-CS-6665                     TCGA-CS-6666 
"DEL PEAK 16(14Q24.3) WILD-TYPE" "DEL PEAK 16(14Q24.3) WILD-TYPE" 
                    TCGA-CS-6667                     TCGA-CS-6668 
"DEL PEAK 16(14Q24.3) WILD-TYPE"   "DEL PEAK 16(14Q24.3) MUTATED" 
                    TCGA-CS-6669                     TCGA-CS-6670 
"DEL PEAK 16(14Q24.3) WILD-TYPE" "DEL PEAK 16(14Q24.3) WILD-TYPE" 
                    TCGA-DB-5270                     TCGA-DB-5273 
"DEL PEAK 16(14Q24.3) WILD-TYPE" "DEL PEAK 16(14Q24.3) WILD-TYPE" 
                    TCGA-DB-5274                     TCGA-DB-5275 
"DEL PEAK 16(14Q24.3) WILD-TYPE" "DEL PEAK 16(14Q24.3) WILD-TYPE" 
                    TCGA-DB-5276                     TCGA-DB-5277 
"DEL PEAK 16(14Q24.3) WILD-TYPE" "DEL PEAK 16(14Q24.3) WILD-TYPE" 
                    TCGA-DB-5278                     TCGA-DB-5279 
"DEL PEAK 16(14Q24.3) WILD-TYPE"   "DEL PEAK 16(14Q24.3) MUTATED" 
                    TCGA-DB-5280                     TCGA-DB-5281 
"DEL PEAK 16(14Q24.3) WILD-TYPE" "DEL PEAK 16(14Q24.3) WILD-TYPE" 
                    TCGA-DH-5140                     TCGA-DH-5141 
  "DEL PEAK 16(14Q24.3) MUTATED" "DEL PEAK 16(14Q24.3) WILD-TYPE" 
                    TCGA-DH-5142                     TCGA-DH-5143 
  "DEL PEAK 16(14Q24.3) MUTATED"   "DEL PEAK 16(14Q24.3) MUTATED" 
                    TCGA-DH-5144                     TCGA-DU-5847 
"DEL PEAK 16(14Q24.3) WILD-TYPE"   "DEL PEAK 16(14Q24.3) MUTATED" 
                    TCGA-DU-5849                     TCGA-DU-5851 
"DEL PEAK 16(14Q24.3) WILD-TYPE" "DEL PEAK 16(14Q24.3) WILD-TYPE" 
                    TCGA-DU-5852                     TCGA-DU-5853 
  "DEL PEAK 16(14Q24.3) MUTATED" "DEL PEAK 16(14Q24.3) WILD-TYPE" 
                    TCGA-DU-5854                     TCGA-DU-5855 
"DEL PEAK 16(14Q24.3) WILD-TYPE"   "DEL PEAK 16(14Q24.3) MUTATED" 
                    TCGA-DU-5870                     TCGA-DU-5871 
"DEL PEAK 16(14Q24.3) WILD-TYPE" "DEL PEAK 16(14Q24.3) WILD-TYPE" 
                    TCGA-DU-5872                     TCGA-DU-5874 
  "DEL PEAK 16(14Q24.3) MUTATED" "DEL PEAK 16(14Q24.3) WILD-TYPE" 
                    TCGA-DU-6392                     TCGA-DU-6393 
"DEL PEAK 16(14Q24.3) WILD-TYPE" "DEL PEAK 16(14Q24.3) WILD-TYPE" 
                    TCGA-DU-6394                     TCGA-DU-6395 
"DEL PEAK 16(14Q24.3) WILD-TYPE" "DEL PEAK 16(14Q24.3) WILD-TYPE" 
                    TCGA-DU-6396                     TCGA-DU-6397 
  "DEL PEAK 16(14Q24.3) MUTATED"   "DEL PEAK 16(14Q24.3) MUTATED" 
                    TCGA-DU-6399                     TCGA-DU-6400 
  "DEL PEAK 16(14Q24.3) MUTATED" "DEL PEAK 16(14Q24.3) WILD-TYPE" 
                    TCGA-DU-6401                     TCGA-DU-6402 
"DEL PEAK 16(14Q24.3) WILD-TYPE" "DEL PEAK 16(14Q24.3) WILD-TYPE" 
                    TCGA-DU-6403                     TCGA-DU-6404 
  "DEL PEAK 16(14Q24.3) MUTATED" "DEL PEAK 16(14Q24.3) WILD-TYPE" 
                    TCGA-DU-6405                     TCGA-DU-6406 
"DEL PEAK 16(14Q24.3) WILD-TYPE" "DEL PEAK 16(14Q24.3) WILD-TYPE" 
                    TCGA-DU-6407                     TCGA-DU-6408 
"DEL PEAK 16(14Q24.3) WILD-TYPE"   "DEL PEAK 16(14Q24.3) MUTATED" 
                    TCGA-DU-6410                     TCGA-DU-6542 
"DEL PEAK 16(14Q24.3) WILD-TYPE"   "DEL PEAK 16(14Q24.3) MUTATED" 
                    TCGA-DU-7006                     TCGA-DU-7007 
"DEL PEAK 16(14Q24.3) WILD-TYPE"   "DEL PEAK 16(14Q24.3) MUTATED" 
                    TCGA-DU-7008                     TCGA-DU-7009 
"DEL PEAK 16(14Q24.3) WILD-TYPE" "DEL PEAK 16(14Q24.3) WILD-TYPE" 
                    TCGA-DU-7010                     TCGA-DU-7011 
  "DEL PEAK 16(14Q24.3) MUTATED" "DEL PEAK 16(14Q24.3) WILD-TYPE" 
                    TCGA-DU-7012                     TCGA-DU-7013 
  "DEL PEAK 16(14Q24.3) MUTATED" "DEL PEAK 16(14Q24.3) WILD-TYPE" 
                    TCGA-DU-7014                     TCGA-DU-7015 
"DEL PEAK 16(14Q24.3) WILD-TYPE" "DEL PEAK 16(14Q24.3) WILD-TYPE" 
                    TCGA-DU-7018                     TCGA-DU-7019 
"DEL PEAK 16(14Q24.3) WILD-TYPE"   "DEL PEAK 16(14Q24.3) MUTATED" 
                    TCGA-DU-7290                     TCGA-DU-7292 
  "DEL PEAK 16(14Q24.3) MUTATED" "DEL PEAK 16(14Q24.3) WILD-TYPE" 
                    TCGA-DU-7294                     TCGA-DU-7298 
"DEL PEAK 16(14Q24.3) WILD-TYPE"   "DEL PEAK 16(14Q24.3) MUTATED" 
                    TCGA-DU-7299                     TCGA-DU-7300 
"DEL PEAK 16(14Q24.3) WILD-TYPE" "DEL PEAK 16(14Q24.3) WILD-TYPE" 
                    TCGA-DU-7301                     TCGA-DU-7302 
"DEL PEAK 16(14Q24.3) WILD-TYPE"   "DEL PEAK 16(14Q24.3) MUTATED" 
                    TCGA-DU-7304                     TCGA-DU-7306 
"DEL PEAK 16(14Q24.3) WILD-TYPE" "DEL PEAK 16(14Q24.3) WILD-TYPE" 
                    TCGA-DU-7309                     TCGA-E1-5302 
"DEL PEAK 16(14Q24.3) WILD-TYPE" "DEL PEAK 16(14Q24.3) WILD-TYPE" 
                    TCGA-E1-5303                     TCGA-E1-5304 
"DEL PEAK 16(14Q24.3) WILD-TYPE"   "DEL PEAK 16(14Q24.3) MUTATED" 
                    TCGA-E1-5305                     TCGA-E1-5307 
  "DEL PEAK 16(14Q24.3) MUTATED"   "DEL PEAK 16(14Q24.3) MUTATED" 
                    TCGA-E1-5311                     TCGA-E1-5318 
"DEL PEAK 16(14Q24.3) WILD-TYPE" "DEL PEAK 16(14Q24.3) WILD-TYPE" 
                    TCGA-E1-5319                     TCGA-E1-5322 
  "DEL PEAK 16(14Q24.3) MUTATED"   "DEL PEAK 16(14Q24.3) MUTATED" 
                    TCGA-EZ-7264                     TCGA-FG-5962 
  "DEL PEAK 16(14Q24.3) MUTATED" "DEL PEAK 16(14Q24.3) WILD-TYPE" 
                    TCGA-FG-5963                     TCGA-FG-5964 
  "DEL PEAK 16(14Q24.3) MUTATED" "DEL PEAK 16(14Q24.3) WILD-TYPE" 
                    TCGA-FG-5965                     TCGA-FG-6688 
"DEL PEAK 16(14Q24.3) WILD-TYPE" "DEL PEAK 16(14Q24.3) WILD-TYPE" 
                    TCGA-FG-6689                     TCGA-FG-6690 
"DEL PEAK 16(14Q24.3) WILD-TYPE" "DEL PEAK 16(14Q24.3) WILD-TYPE" 
                    TCGA-FG-6691                     TCGA-FG-6692 
"DEL PEAK 16(14Q24.3) WILD-TYPE" "DEL PEAK 16(14Q24.3) WILD-TYPE" 
                    TCGA-FG-7634                     TCGA-FG-7636 
"DEL PEAK 16(14Q24.3) WILD-TYPE" "DEL PEAK 16(14Q24.3) WILD-TYPE" 
                    TCGA-FG-7638                     TCGA-FG-7643 
"DEL PEAK 16(14Q24.3) WILD-TYPE"   "DEL PEAK 16(14Q24.3) MUTATED" 
                    TCGA-FN-7833                     TCGA-HT-7467 
"DEL PEAK 16(14Q24.3) WILD-TYPE" "DEL PEAK 16(14Q24.3) WILD-TYPE" 
                    TCGA-HT-7468                     TCGA-HT-7470 
"DEL PEAK 16(14Q24.3) WILD-TYPE" "DEL PEAK 16(14Q24.3) WILD-TYPE" 
                    TCGA-HT-7472                     TCGA-HT-7473 
"DEL PEAK 16(14Q24.3) WILD-TYPE" "DEL PEAK 16(14Q24.3) WILD-TYPE" 
                    TCGA-HT-7474                     TCGA-HT-7475 
"DEL PEAK 16(14Q24.3) WILD-TYPE" "DEL PEAK 16(14Q24.3) WILD-TYPE" 
                    TCGA-HT-7476                     TCGA-HT-7478 
"DEL PEAK 16(14Q24.3) WILD-TYPE" "DEL PEAK 16(14Q24.3) WILD-TYPE" 
                    TCGA-HT-7479                     TCGA-HT-7480 
"DEL PEAK 16(14Q24.3) WILD-TYPE" "DEL PEAK 16(14Q24.3) WILD-TYPE" 
                    TCGA-HT-7481                     TCGA-HT-7482 
"DEL PEAK 16(14Q24.3) WILD-TYPE" "DEL PEAK 16(14Q24.3) WILD-TYPE" 
                    TCGA-HT-7483                     TCGA-HT-7485 
"DEL PEAK 16(14Q24.3) WILD-TYPE" "DEL PEAK 16(14Q24.3) WILD-TYPE" 
                    TCGA-HT-7601                     TCGA-HT-7602 
"DEL PEAK 16(14Q24.3) WILD-TYPE" "DEL PEAK 16(14Q24.3) WILD-TYPE" 
                    TCGA-HT-7603                     TCGA-HT-7604 
  "DEL PEAK 16(14Q24.3) MUTATED" "DEL PEAK 16(14Q24.3) WILD-TYPE" 
                    TCGA-HT-7605                     TCGA-HT-7606 
"DEL PEAK 16(14Q24.3) WILD-TYPE"   "DEL PEAK 16(14Q24.3) MUTATED" 
                    TCGA-HT-7607                     TCGA-HT-7608 
"DEL PEAK 16(14Q24.3) WILD-TYPE" "DEL PEAK 16(14Q24.3) WILD-TYPE" 
                    TCGA-HT-7609                     TCGA-HT-7610 
"DEL PEAK 16(14Q24.3) WILD-TYPE" "DEL PEAK 16(14Q24.3) WILD-TYPE" 
                    TCGA-HW-7486                     TCGA-HW-7487 
"DEL PEAK 16(14Q24.3) WILD-TYPE" "DEL PEAK 16(14Q24.3) WILD-TYPE" 
                    TCGA-HW-7489                     TCGA-HW-7490 
  "DEL PEAK 16(14Q24.3) MUTATED" "DEL PEAK 16(14Q24.3) WILD-TYPE" 
                    TCGA-HW-7491                     TCGA-HW-7493 
"DEL PEAK 16(14Q24.3) WILD-TYPE" "DEL PEAK 16(14Q24.3) WILD-TYPE" 
                    TCGA-HW-7495                     TCGA-IK-7675 
"DEL PEAK 16(14Q24.3) WILD-TYPE" "DEL PEAK 16(14Q24.3) WILD-TYPE" 
                    TCGA-IK-8125 
  "DEL PEAK 16(14Q24.3) MUTATED" 
                    TCGA-CS-4938                     TCGA-CS-4941 
  "DEL PEAK 16(14Q24.3) MUTATED"   "DEL PEAK 16(14Q24.3) MUTATED" 
                    TCGA-CS-4942                     TCGA-CS-4943 
  "DEL PEAK 16(14Q24.3) MUTATED" "DEL PEAK 16(14Q24.3) WILD-TYPE" 
                    TCGA-CS-4944                     TCGA-CS-5390 
  "DEL PEAK 16(14Q24.3) MUTATED" "DEL PEAK 16(14Q24.3) WILD-TYPE" 
                    TCGA-CS-5393                     TCGA-CS-5394 
"DEL PEAK 16(14Q24.3) WILD-TYPE" "DEL PEAK 16(14Q24.3) WILD-TYPE" 
                    TCGA-CS-5395                     TCGA-CS-5396 
"DEL PEAK 16(14Q24.3) WILD-TYPE" "DEL PEAK 16(14Q24.3) WILD-TYPE" 
                    TCGA-CS-5397                     TCGA-CS-6186 
"DEL PEAK 16(14Q24.3) WILD-TYPE" "DEL PEAK 16(14Q24.3) WILD-TYPE" 
                    TCGA-CS-6188                     TCGA-CS-6290 
"DEL PEAK 16(14Q24.3) WILD-TYPE" "DEL PEAK 16(14Q24.3) WILD-TYPE" 
                    TCGA-CS-6665                     TCGA-CS-6666 
"DEL PEAK 16(14Q24.3) WILD-TYPE" "DEL PEAK 16(14Q24.3) WILD-TYPE" 
                    TCGA-CS-6667                     TCGA-CS-6668 
"DEL PEAK 16(14Q24.3) WILD-TYPE"   "DEL PEAK 16(14Q24.3) MUTATED" 
                    TCGA-CS-6669                     TCGA-CS-6670 
"DEL PEAK 16(14Q24.3) WILD-TYPE" "DEL PEAK 16(14Q24.3) WILD-TYPE" 
                    TCGA-DB-5270                     TCGA-DB-5273 
"DEL PEAK 16(14Q24.3) WILD-TYPE" "DEL PEAK 16(14Q24.3) WILD-TYPE" 
                    TCGA-DB-5274                     TCGA-DB-5275 
"DEL PEAK 16(14Q24.3) WILD-TYPE" "DEL PEAK 16(14Q24.3) WILD-TYPE" 
                    TCGA-DB-5276                     TCGA-DB-5277 
"DEL PEAK 16(14Q24.3) WILD-TYPE" "DEL PEAK 16(14Q24.3) WILD-TYPE" 
                    TCGA-DB-5278                     TCGA-DB-5279 
"DEL PEAK 16(14Q24.3) WILD-TYPE"   "DEL PEAK 16(14Q24.3) MUTATED" 
                    TCGA-DB-5280                     TCGA-DB-5281 
"DEL PEAK 16(14Q24.3) WILD-TYPE" "DEL PEAK 16(14Q24.3) WILD-TYPE" 
                    TCGA-DH-5140                     TCGA-DH-5141 
  "DEL PEAK 16(14Q24.3) MUTATED" "DEL PEAK 16(14Q24.3) WILD-TYPE" 
                    TCGA-DH-5142                     TCGA-DH-5143 
  "DEL PEAK 16(14Q24.3) MUTATED"   "DEL PEAK 16(14Q24.3) MUTATED" 
                    TCGA-DH-5144                     TCGA-DU-5847 
"DEL PEAK 16(14Q24.3) WILD-TYPE"   "DEL PEAK 16(14Q24.3) MUTATED" 
                    TCGA-DU-5849                     TCGA-DU-5851 
"DEL PEAK 16(14Q24.3) WILD-TYPE" "DEL PEAK 16(14Q24.3) WILD-TYPE" 
                    TCGA-DU-5852                     TCGA-DU-5853 
  "DEL PEAK 16(14Q24.3) MUTATED" "DEL PEAK 16(14Q24.3) WILD-TYPE" 
                    TCGA-DU-5854                     TCGA-DU-5855 
"DEL PEAK 16(14Q24.3) WILD-TYPE"   "DEL PEAK 16(14Q24.3) MUTATED" 
                    TCGA-DU-5870                     TCGA-DU-5871 
"DEL PEAK 16(14Q24.3) WILD-TYPE" "DEL PEAK 16(14Q24.3) WILD-TYPE" 
                    TCGA-DU-5872                     TCGA-DU-5874 
  "DEL PEAK 16(14Q24.3) MUTATED" "DEL PEAK 16(14Q24.3) WILD-TYPE" 
                    TCGA-DU-6392                     TCGA-DU-6393 
"DEL PEAK 16(14Q24.3) WILD-TYPE" "DEL PEAK 16(14Q24.3) WILD-TYPE" 
                    TCGA-DU-6394                     TCGA-DU-6395 
"DEL PEAK 16(14Q24.3) WILD-TYPE" "DEL PEAK 16(14Q24.3) WILD-TYPE" 
                    TCGA-DU-6396                     TCGA-DU-6397 
  "DEL PEAK 16(14Q24.3) MUTATED"   "DEL PEAK 16(14Q24.3) MUTATED" 
                    TCGA-DU-6399                     TCGA-DU-6400 
  "DEL PEAK 16(14Q24.3) MUTATED" "DEL PEAK 16(14Q24.3) WILD-TYPE" 
                    TCGA-DU-6401                     TCGA-DU-6402 
"DEL PEAK 16(14Q24.3) WILD-TYPE" "DEL PEAK 16(14Q24.3) WILD-TYPE" 
                    TCGA-DU-6403                     TCGA-DU-6404 
  "DEL PEAK 16(14Q24.3) MUTATED" "DEL PEAK 16(14Q24.3) WILD-TYPE" 
                    TCGA-DU-6405                     TCGA-DU-6406 
"DEL PEAK 16(14Q24.3) WILD-TYPE" "DEL PEAK 16(14Q24.3) WILD-TYPE" 
                    TCGA-DU-6407                     TCGA-DU-6408 
"DEL PEAK 16(14Q24.3) WILD-TYPE"   "DEL PEAK 16(14Q24.3) MUTATED" 
                    TCGA-DU-6410                     TCGA-DU-6542 
"DEL PEAK 16(14Q24.3) WILD-TYPE"   "DEL PEAK 16(14Q24.3) MUTATED" 
                    TCGA-DU-7006                     TCGA-DU-7007 
"DEL PEAK 16(14Q24.3) WILD-TYPE"   "DEL PEAK 16(14Q24.3) MUTATED" 
                    TCGA-DU-7008                     TCGA-DU-7009 
"DEL PEAK 16(14Q24.3) WILD-TYPE" "DEL PEAK 16(14Q24.3) WILD-TYPE" 
                    TCGA-DU-7010                     TCGA-DU-7011 
  "DEL PEAK 16(14Q24.3) MUTATED" "DEL PEAK 16(14Q24.3) WILD-TYPE" 
                    TCGA-DU-7012                     TCGA-DU-7013 
  "DEL PEAK 16(14Q24.3) MUTATED" "DEL PEAK 16(14Q24.3) WILD-TYPE" 
                    TCGA-DU-7014                     TCGA-DU-7015 
"DEL PEAK 16(14Q24.3) WILD-TYPE" "DEL PEAK 16(14Q24.3) WILD-TYPE" 
                    TCGA-DU-7018                     TCGA-DU-7019 
"DEL PEAK 16(14Q24.3) WILD-TYPE"   "DEL PEAK 16(14Q24.3) MUTATED" 
                    TCGA-DU-7290                     TCGA-DU-7292 
  "DEL PEAK 16(14Q24.3) MUTATED" "DEL PEAK 16(14Q24.3) WILD-TYPE" 
                    TCGA-DU-7294                     TCGA-DU-7298 
"DEL PEAK 16(14Q24.3) WILD-TYPE"   "DEL PEAK 16(14Q24.3) MUTATED" 
                    TCGA-DU-7299                     TCGA-DU-7300 
"DEL PEAK 16(14Q24.3) WILD-TYPE" "DEL PEAK 16(14Q24.3) WILD-TYPE" 
                    TCGA-DU-7301                     TCGA-DU-7302 
"DEL PEAK 16(14Q24.3) WILD-TYPE"   "DEL PEAK 16(14Q24.3) MUTATED" 
                    TCGA-DU-7304                     TCGA-DU-7306 
"DEL PEAK 16(14Q24.3) WILD-TYPE" "DEL PEAK 16(14Q24.3) WILD-TYPE" 
                    TCGA-DU-7309                     TCGA-E1-5302 
"DEL PEAK 16(14Q24.3) WILD-TYPE" "DEL PEAK 16(14Q24.3) WILD-TYPE" 
                    TCGA-E1-5303                     TCGA-E1-5304 
"DEL PEAK 16(14Q24.3) WILD-TYPE"   "DEL PEAK 16(14Q24.3) MUTATED" 
                    TCGA-E1-5305                     TCGA-E1-5307 
  "DEL PEAK 16(14Q24.3) MUTATED"   "DEL PEAK 16(14Q24.3) MUTATED" 
                    TCGA-E1-5311                     TCGA-E1-5318 
"DEL PEAK 16(14Q24.3) WILD-TYPE" "DEL PEAK 16(14Q24.3) WILD-TYPE" 
                    TCGA-E1-5319                     TCGA-E1-5322 
  "DEL PEAK 16(14Q24.3) MUTATED"   "DEL PEAK 16(14Q24.3) MUTATED" 
                    TCGA-EZ-7264                     TCGA-FG-5962 
  "DEL PEAK 16(14Q24.3) MUTATED" "DEL PEAK 16(14Q24.3) WILD-TYPE" 
                    TCGA-FG-5963                     TCGA-FG-5964 
  "DEL PEAK 16(14Q24.3) MUTATED" "DEL PEAK 16(14Q24.3) WILD-TYPE" 
                    TCGA-FG-5965                     TCGA-FG-6688 
"DEL PEAK 16(14Q24.3) WILD-TYPE" "DEL PEAK 16(14Q24.3) WILD-TYPE" 
                    TCGA-FG-6689                     TCGA-FG-6690 
"DEL PEAK 16(14Q24.3) WILD-TYPE" "DEL PEAK 16(14Q24.3) WILD-TYPE" 
                    TCGA-FG-6691                     TCGA-FG-6692 
"DEL PEAK 16(14Q24.3) WILD-TYPE" "DEL PEAK 16(14Q24.3) WILD-TYPE" 
                    TCGA-FG-7634                     TCGA-FG-7636 
"DEL PEAK 16(14Q24.3) WILD-TYPE" "DEL PEAK 16(14Q24.3) WILD-TYPE" 
                    TCGA-FG-7638                     TCGA-FG-7643 
"DEL PEAK 16(14Q24.3) WILD-TYPE"   "DEL PEAK 16(14Q24.3) MUTATED" 
                    TCGA-FN-7833                     TCGA-HT-7467 
"DEL PEAK 16(14Q24.3) WILD-TYPE" "DEL PEAK 16(14Q24.3) WILD-TYPE" 
                    TCGA-HT-7468                     TCGA-HT-7470 
"DEL PEAK 16(14Q24.3) WILD-TYPE" "DEL PEAK 16(14Q24.3) WILD-TYPE" 
                    TCGA-HT-7472                     TCGA-HT-7473 
"DEL PEAK 16(14Q24.3) WILD-TYPE" "DEL PEAK 16(14Q24.3) WILD-TYPE" 
                    TCGA-HT-7474                     TCGA-HT-7475 
"DEL PEAK 16(14Q24.3) WILD-TYPE" "DEL PEAK 16(14Q24.3) WILD-TYPE" 
                    TCGA-HT-7476                     TCGA-HT-7478 
"DEL PEAK 16(14Q24.3) WILD-TYPE" "DEL PEAK 16(14Q24.3) WILD-TYPE" 
                    TCGA-HT-7479                     TCGA-HT-7480 
"DEL PEAK 16(14Q24.3) WILD-TYPE" "DEL PEAK 16(14Q24.3) WILD-TYPE" 
                    TCGA-HT-7481                     TCGA-HT-7482 
"DEL PEAK 16(14Q24.3) WILD-TYPE" "DEL PEAK 16(14Q24.3) WILD-TYPE" 
                    TCGA-HT-7483                     TCGA-HT-7485 
"DEL PEAK 16(14Q24.3) WILD-TYPE" "DEL PEAK 16(14Q24.3) WILD-TYPE" 
                    TCGA-HT-7601                     TCGA-HT-7602 
"DEL PEAK 16(14Q24.3) WILD-TYPE" "DEL PEAK 16(14Q24.3) WILD-TYPE" 
                    TCGA-HT-7603                     TCGA-HT-7604 
  "DEL PEAK 16(14Q24.3) MUTATED" "DEL PEAK 16(14Q24.3) WILD-TYPE" 
                    TCGA-HT-7605                     TCGA-HT-7606 
"DEL PEAK 16(14Q24.3) WILD-TYPE"   "DEL PEAK 16(14Q24.3) MUTATED" 
                    TCGA-HT-7607                     TCGA-HT-7608 
"DEL PEAK 16(14Q24.3) WILD-TYPE" "DEL PEAK 16(14Q24.3) WILD-TYPE" 
                    TCGA-HT-7609                     TCGA-HT-7610 
"DEL PEAK 16(14Q24.3) WILD-TYPE" "DEL PEAK 16(14Q24.3) WILD-TYPE" 
                    TCGA-HW-7486                     TCGA-HW-7487 
"DEL PEAK 16(14Q24.3) WILD-TYPE" "DEL PEAK 16(14Q24.3) WILD-TYPE" 
                    TCGA-HW-7489                     TCGA-HW-7490 
  "DEL PEAK 16(14Q24.3) MUTATED" "DEL PEAK 16(14Q24.3) WILD-TYPE" 
                    TCGA-HW-7491                     TCGA-HW-7493 
"DEL PEAK 16(14Q24.3) WILD-TYPE" "DEL PEAK 16(14Q24.3) WILD-TYPE" 
                    TCGA-HW-7495                     TCGA-IK-7675 
"DEL PEAK 16(14Q24.3) WILD-TYPE" "DEL PEAK 16(14Q24.3) WILD-TYPE" 
                    TCGA-IK-8125 
  "DEL PEAK 16(14Q24.3) MUTATED" 
[1] "hr=" "2.2"
D30V2, continuous
D30V3, binary
[1] "tbl2"
                                cls
clus                             [,1] [,2]
  DEL PEAK 16(14Q24.3) MUTATED     22   16
  DEL PEAK 16(14Q24.3) WILD-TYPE   40   67
        clus
vv       DEL PEAK 16(14Q24.3) MUTATED DEL PEAK 16(14Q24.3) WILD-TYPE
  FEMALE                           22                             40
  MALE                             16                             67
D30V4, continuous
D30V5, multiclass
                   clus
vv                  DEL PEAK 16(14Q24.3) MUTATED DEL PEAK 16(14Q24.3) WILD-TYPE
  ASTROCYTOMA                                 16                             34
  OLIGOASTROCYTOMA                            12                             24
  OLIGODENDROGLIOMA                            9                             49
D30V6, binary
[1] "tbl2"
                                cls
clus                             [,1] [,2]
  DEL PEAK 16(14Q24.3) MUTATED     15   23
  DEL PEAK 16(14Q24.3) WILD-TYPE   44   63
     clus
vv    DEL PEAK 16(14Q24.3) MUTATED DEL PEAK 16(14Q24.3) WILD-TYPE
  NO                            23                             63
  YES                           15                             44
D30V7, binary
[1] "tbl2"
                                cls
clus                             [,1] [,2]
  DEL PEAK 16(14Q24.3) MUTATED     21   17
  DEL PEAK 16(14Q24.3) WILD-TYPE   53   54
     clus
vv    DEL PEAK 16(14Q24.3) MUTATED DEL PEAK 16(14Q24.3) WILD-TYPE
  NO                            17                             54
  YES                           21                             53

Clustering(31) Variable = Del Peak 17(17q25.3) mutation analysis
D31V1, survival
                    TCGA-CS-4938                     TCGA-CS-4941 
"DEL PEAK 17(17Q25.3) WILD-TYPE" "DEL PEAK 17(17Q25.3) WILD-TYPE" 
                    TCGA-CS-4942                     TCGA-CS-4943 
"DEL PEAK 17(17Q25.3) WILD-TYPE" "DEL PEAK 17(17Q25.3) WILD-TYPE" 
                    TCGA-CS-4944                     TCGA-CS-5390 
"DEL PEAK 17(17Q25.3) WILD-TYPE" "DEL PEAK 17(17Q25.3) WILD-TYPE" 
                    TCGA-CS-5393                     TCGA-CS-5394 
"DEL PEAK 17(17Q25.3) WILD-TYPE" "DEL PEAK 17(17Q25.3) WILD-TYPE" 
                    TCGA-CS-5395                     TCGA-CS-5396 
"DEL PEAK 17(17Q25.3) WILD-TYPE" "DEL PEAK 17(17Q25.3) WILD-TYPE" 
                    TCGA-CS-5397                     TCGA-CS-6186 
"DEL PEAK 17(17Q25.3) WILD-TYPE" "DEL PEAK 17(17Q25.3) WILD-TYPE" 
                    TCGA-CS-6188                     TCGA-CS-6290 
"DEL PEAK 17(17Q25.3) WILD-TYPE" "DEL PEAK 17(17Q25.3) WILD-TYPE" 
                    TCGA-CS-6665                     TCGA-CS-6666 
"DEL PEAK 17(17Q25.3) WILD-TYPE" "DEL PEAK 17(17Q25.3) WILD-TYPE" 
                    TCGA-CS-6667                     TCGA-CS-6668 
  "DEL PEAK 17(17Q25.3) MUTATED" "DEL PEAK 17(17Q25.3) WILD-TYPE" 
                    TCGA-CS-6669                     TCGA-CS-6670 
"DEL PEAK 17(17Q25.3) WILD-TYPE" "DEL PEAK 17(17Q25.3) WILD-TYPE" 
                    TCGA-DB-5270                     TCGA-DB-5273 
"DEL PEAK 17(17Q25.3) WILD-TYPE" "DEL PEAK 17(17Q25.3) WILD-TYPE" 
                    TCGA-DB-5274                     TCGA-DB-5275 
"DEL PEAK 17(17Q25.3) WILD-TYPE"   "DEL PEAK 17(17Q25.3) MUTATED" 
                    TCGA-DB-5276                     TCGA-DB-5277 
"DEL PEAK 17(17Q25.3) WILD-TYPE" "DEL PEAK 17(17Q25.3) WILD-TYPE" 
                    TCGA-DB-5278                     TCGA-DB-5279 
"DEL PEAK 17(17Q25.3) WILD-TYPE" "DEL PEAK 17(17Q25.3) WILD-TYPE" 
                    TCGA-DB-5280                     TCGA-DB-5281 
"DEL PEAK 17(17Q25.3) WILD-TYPE" "DEL PEAK 17(17Q25.3) WILD-TYPE" 
                    TCGA-DH-5140                     TCGA-DH-5141 
"DEL PEAK 17(17Q25.3) WILD-TYPE" "DEL PEAK 17(17Q25.3) WILD-TYPE" 
                    TCGA-DH-5142                     TCGA-DH-5143 
"DEL PEAK 17(17Q25.3) WILD-TYPE" "DEL PEAK 17(17Q25.3) WILD-TYPE" 
                    TCGA-DH-5144                     TCGA-DU-5847 
"DEL PEAK 17(17Q25.3) WILD-TYPE" "DEL PEAK 17(17Q25.3) WILD-TYPE" 
                    TCGA-DU-5849                     TCGA-DU-5851 
"DEL PEAK 17(17Q25.3) WILD-TYPE" "DEL PEAK 17(17Q25.3) WILD-TYPE" 
                    TCGA-DU-5852                     TCGA-DU-5853 
"DEL PEAK 17(17Q25.3) WILD-TYPE" "DEL PEAK 17(17Q25.3) WILD-TYPE" 
                    TCGA-DU-5854                     TCGA-DU-5855 
"DEL PEAK 17(17Q25.3) WILD-TYPE" "DEL PEAK 17(17Q25.3) WILD-TYPE" 
                    TCGA-DU-5870                     TCGA-DU-5871 
"DEL PEAK 17(17Q25.3) WILD-TYPE" "DEL PEAK 17(17Q25.3) WILD-TYPE" 
                    TCGA-DU-5872                     TCGA-DU-5874 
"DEL PEAK 17(17Q25.3) WILD-TYPE" "DEL PEAK 17(17Q25.3) WILD-TYPE" 
                    TCGA-DU-6392                     TCGA-DU-6393 
"DEL PEAK 17(17Q25.3) WILD-TYPE" "DEL PEAK 17(17Q25.3) WILD-TYPE" 
                    TCGA-DU-6394                     TCGA-DU-6395 
"DEL PEAK 17(17Q25.3) WILD-TYPE" "DEL PEAK 17(17Q25.3) WILD-TYPE" 
                    TCGA-DU-6396                     TCGA-DU-6397 
"DEL PEAK 17(17Q25.3) WILD-TYPE" "DEL PEAK 17(17Q25.3) WILD-TYPE" 
                    TCGA-DU-6399                     TCGA-DU-6400 
"DEL PEAK 17(17Q25.3) WILD-TYPE"   "DEL PEAK 17(17Q25.3) MUTATED" 
                    TCGA-DU-6401                     TCGA-DU-6402 
"DEL PEAK 17(17Q25.3) WILD-TYPE" "DEL PEAK 17(17Q25.3) WILD-TYPE" 
                    TCGA-DU-6403                     TCGA-DU-6404 
"DEL PEAK 17(17Q25.3) WILD-TYPE" "DEL PEAK 17(17Q25.3) WILD-TYPE" 
                    TCGA-DU-6405                     TCGA-DU-6406 
"DEL PEAK 17(17Q25.3) WILD-TYPE" "DEL PEAK 17(17Q25.3) WILD-TYPE" 
                    TCGA-DU-6407                     TCGA-DU-6408 
"DEL PEAK 17(17Q25.3) WILD-TYPE" "DEL PEAK 17(17Q25.3) WILD-TYPE" 
                    TCGA-DU-6410                     TCGA-DU-6542 
"DEL PEAK 17(17Q25.3) WILD-TYPE" "DEL PEAK 17(17Q25.3) WILD-TYPE" 
                    TCGA-DU-7006                     TCGA-DU-7007 
"DEL PEAK 17(17Q25.3) WILD-TYPE" "DEL PEAK 17(17Q25.3) WILD-TYPE" 
                    TCGA-DU-7008                     TCGA-DU-7009 
"DEL PEAK 17(17Q25.3) WILD-TYPE" "DEL PEAK 17(17Q25.3) WILD-TYPE" 
                    TCGA-DU-7010                     TCGA-DU-7011 
"DEL PEAK 17(17Q25.3) WILD-TYPE" "DEL PEAK 17(17Q25.3) WILD-TYPE" 
                    TCGA-DU-7012                     TCGA-DU-7013 
"DEL PEAK 17(17Q25.3) WILD-TYPE" "DEL PEAK 17(17Q25.3) WILD-TYPE" 
                    TCGA-DU-7014                     TCGA-DU-7015 
"DEL PEAK 17(17Q25.3) WILD-TYPE" "DEL PEAK 17(17Q25.3) WILD-TYPE" 
                    TCGA-DU-7018                     TCGA-DU-7019 
"DEL PEAK 17(17Q25.3) WILD-TYPE"   "DEL PEAK 17(17Q25.3) MUTATED" 
                    TCGA-DU-7290                     TCGA-DU-7292 
"DEL PEAK 17(17Q25.3) WILD-TYPE" "DEL PEAK 17(17Q25.3) WILD-TYPE" 
                    TCGA-DU-7294                     TCGA-DU-7298 
"DEL PEAK 17(17Q25.3) WILD-TYPE" "DEL PEAK 17(17Q25.3) WILD-TYPE" 
                    TCGA-DU-7299                     TCGA-DU-7300 
"DEL PEAK 17(17Q25.3) WILD-TYPE" "DEL PEAK 17(17Q25.3) WILD-TYPE" 
                    TCGA-DU-7301                     TCGA-DU-7302 
"DEL PEAK 17(17Q25.3) WILD-TYPE" "DEL PEAK 17(17Q25.3) WILD-TYPE" 
                    TCGA-DU-7304                     TCGA-DU-7306 
"DEL PEAK 17(17Q25.3) WILD-TYPE" "DEL PEAK 17(17Q25.3) WILD-TYPE" 
                    TCGA-DU-7309                     TCGA-E1-5302 
"DEL PEAK 17(17Q25.3) WILD-TYPE" "DEL PEAK 17(17Q25.3) WILD-TYPE" 
                    TCGA-E1-5303                     TCGA-E1-5304 
"DEL PEAK 17(17Q25.3) WILD-TYPE" "DEL PEAK 17(17Q25.3) WILD-TYPE" 
                    TCGA-E1-5305                     TCGA-E1-5307 
"DEL PEAK 17(17Q25.3) WILD-TYPE" "DEL PEAK 17(17Q25.3) WILD-TYPE" 
                    TCGA-E1-5311                     TCGA-E1-5318 
"DEL PEAK 17(17Q25.3) WILD-TYPE" "DEL PEAK 17(17Q25.3) WILD-TYPE" 
                    TCGA-E1-5319                     TCGA-E1-5322 
"DEL PEAK 17(17Q25.3) WILD-TYPE" "DEL PEAK 17(17Q25.3) WILD-TYPE" 
                    TCGA-EZ-7264                     TCGA-FG-5962 
"DEL PEAK 17(17Q25.3) WILD-TYPE" "DEL PEAK 17(17Q25.3) WILD-TYPE" 
                    TCGA-FG-5963                     TCGA-FG-5964 
"DEL PEAK 17(17Q25.3) WILD-TYPE" "DEL PEAK 17(17Q25.3) WILD-TYPE" 
                    TCGA-FG-5965                     TCGA-FG-6688 
"DEL PEAK 17(17Q25.3) WILD-TYPE" "DEL PEAK 17(17Q25.3) WILD-TYPE" 
                    TCGA-FG-6689                     TCGA-FG-6690 
"DEL PEAK 17(17Q25.3) WILD-TYPE" "DEL PEAK 17(17Q25.3) WILD-TYPE" 
                    TCGA-FG-6691                     TCGA-FG-6692 
"DEL PEAK 17(17Q25.3) WILD-TYPE" "DEL PEAK 17(17Q25.3) WILD-TYPE" 
                    TCGA-FG-7634                     TCGA-FG-7636 
"DEL PEAK 17(17Q25.3) WILD-TYPE" "DEL PEAK 17(17Q25.3) WILD-TYPE" 
                    TCGA-FG-7638                     TCGA-FG-7643 
"DEL PEAK 17(17Q25.3) WILD-TYPE" "DEL PEAK 17(17Q25.3) WILD-TYPE" 
                    TCGA-FN-7833                     TCGA-HT-7467 
"DEL PEAK 17(17Q25.3) WILD-TYPE" "DEL PEAK 17(17Q25.3) WILD-TYPE" 
                    TCGA-HT-7468                     TCGA-HT-7470 
"DEL PEAK 17(17Q25.3) WILD-TYPE" "DEL PEAK 17(17Q25.3) WILD-TYPE" 
                    TCGA-HT-7472                     TCGA-HT-7473 
"DEL PEAK 17(17Q25.3) WILD-TYPE" "DEL PEAK 17(17Q25.3) WILD-TYPE" 
                    TCGA-HT-7474                     TCGA-HT-7475 
"DEL PEAK 17(17Q25.3) WILD-TYPE" "DEL PEAK 17(17Q25.3) WILD-TYPE" 
                    TCGA-HT-7476                     TCGA-HT-7478 
"DEL PEAK 17(17Q25.3) WILD-TYPE" "DEL PEAK 17(17Q25.3) WILD-TYPE" 
                    TCGA-HT-7479                     TCGA-HT-7480 
  "DEL PEAK 17(17Q25.3) MUTATED" "DEL PEAK 17(17Q25.3) WILD-TYPE" 
                    TCGA-HT-7481                     TCGA-HT-7482 
"DEL PEAK 17(17Q25.3) WILD-TYPE" "DEL PEAK 17(17Q25.3) WILD-TYPE" 
                    TCGA-HT-7483                     TCGA-HT-7485 
  "DEL PEAK 17(17Q25.3) MUTATED" "DEL PEAK 17(17Q25.3) WILD-TYPE" 
                    TCGA-HT-7601                     TCGA-HT-7602 
"DEL PEAK 17(17Q25.3) WILD-TYPE" "DEL PEAK 17(17Q25.3) WILD-TYPE" 
                    TCGA-HT-7603                     TCGA-HT-7604 
"DEL PEAK 17(17Q25.3) WILD-TYPE" "DEL PEAK 17(17Q25.3) WILD-TYPE" 
                    TCGA-HT-7605                     TCGA-HT-7606 
"DEL PEAK 17(17Q25.3) WILD-TYPE" "DEL PEAK 17(17Q25.3) WILD-TYPE" 
                    TCGA-HT-7607                     TCGA-HT-7608 
"DEL PEAK 17(17Q25.3) WILD-TYPE" "DEL PEAK 17(17Q25.3) WILD-TYPE" 
                    TCGA-HT-7609                     TCGA-HT-7610 
"DEL PEAK 17(17Q25.3) WILD-TYPE" "DEL PEAK 17(17Q25.3) WILD-TYPE" 
                    TCGA-HW-7486                     TCGA-HW-7487 
"DEL PEAK 17(17Q25.3) WILD-TYPE" "DEL PEAK 17(17Q25.3) WILD-TYPE" 
                    TCGA-HW-7489                     TCGA-HW-7490 
"DEL PEAK 17(17Q25.3) WILD-TYPE" "DEL PEAK 17(17Q25.3) WILD-TYPE" 
                    TCGA-HW-7491                     TCGA-HW-7493 
"DEL PEAK 17(17Q25.3) WILD-TYPE" "DEL PEAK 17(17Q25.3) WILD-TYPE" 
                    TCGA-HW-7495                     TCGA-IK-7675 
"DEL PEAK 17(17Q25.3) WILD-TYPE"   "DEL PEAK 17(17Q25.3) MUTATED" 
                    TCGA-IK-8125 
"DEL PEAK 17(17Q25.3) WILD-TYPE" 
                    TCGA-CS-4938                     TCGA-CS-4941 
"DEL PEAK 17(17Q25.3) WILD-TYPE" "DEL PEAK 17(17Q25.3) WILD-TYPE" 
                    TCGA-CS-4942                     TCGA-CS-4943 
"DEL PEAK 17(17Q25.3) WILD-TYPE" "DEL PEAK 17(17Q25.3) WILD-TYPE" 
                    TCGA-CS-4944                     TCGA-CS-5390 
"DEL PEAK 17(17Q25.3) WILD-TYPE" "DEL PEAK 17(17Q25.3) WILD-TYPE" 
                    TCGA-CS-5393                     TCGA-CS-5394 
"DEL PEAK 17(17Q25.3) WILD-TYPE" "DEL PEAK 17(17Q25.3) WILD-TYPE" 
                    TCGA-CS-5395                     TCGA-CS-5396 
"DEL PEAK 17(17Q25.3) WILD-TYPE" "DEL PEAK 17(17Q25.3) WILD-TYPE" 
                    TCGA-CS-5397                     TCGA-CS-6186 
"DEL PEAK 17(17Q25.3) WILD-TYPE" "DEL PEAK 17(17Q25.3) WILD-TYPE" 
                    TCGA-CS-6188                     TCGA-CS-6290 
"DEL PEAK 17(17Q25.3) WILD-TYPE" "DEL PEAK 17(17Q25.3) WILD-TYPE" 
                    TCGA-CS-6665                     TCGA-CS-6666 
"DEL PEAK 17(17Q25.3) WILD-TYPE" "DEL PEAK 17(17Q25.3) WILD-TYPE" 
                    TCGA-CS-6667                     TCGA-CS-6668 
  "DEL PEAK 17(17Q25.3) MUTATED" "DEL PEAK 17(17Q25.3) WILD-TYPE" 
                    TCGA-CS-6669                     TCGA-CS-6670 
"DEL PEAK 17(17Q25.3) WILD-TYPE" "DEL PEAK 17(17Q25.3) WILD-TYPE" 
                    TCGA-DB-5270                     TCGA-DB-5273 
"DEL PEAK 17(17Q25.3) WILD-TYPE" "DEL PEAK 17(17Q25.3) WILD-TYPE" 
                    TCGA-DB-5274                     TCGA-DB-5275 
"DEL PEAK 17(17Q25.3) WILD-TYPE"   "DEL PEAK 17(17Q25.3) MUTATED" 
                    TCGA-DB-5276                     TCGA-DB-5277 
"DEL PEAK 17(17Q25.3) WILD-TYPE" "DEL PEAK 17(17Q25.3) WILD-TYPE" 
                    TCGA-DB-5278                     TCGA-DB-5279 
"DEL PEAK 17(17Q25.3) WILD-TYPE" "DEL PEAK 17(17Q25.3) WILD-TYPE" 
                    TCGA-DB-5280                     TCGA-DB-5281 
"DEL PEAK 17(17Q25.3) WILD-TYPE" "DEL PEAK 17(17Q25.3) WILD-TYPE" 
                    TCGA-DH-5140                     TCGA-DH-5141 
"DEL PEAK 17(17Q25.3) WILD-TYPE" "DEL PEAK 17(17Q25.3) WILD-TYPE" 
                    TCGA-DH-5142                     TCGA-DH-5143 
"DEL PEAK 17(17Q25.3) WILD-TYPE" "DEL PEAK 17(17Q25.3) WILD-TYPE" 
                    TCGA-DH-5144                     TCGA-DU-5847 
"DEL PEAK 17(17Q25.3) WILD-TYPE" "DEL PEAK 17(17Q25.3) WILD-TYPE" 
                    TCGA-DU-5849                     TCGA-DU-5851 
"DEL PEAK 17(17Q25.3) WILD-TYPE" "DEL PEAK 17(17Q25.3) WILD-TYPE" 
                    TCGA-DU-5852                     TCGA-DU-5853 
"DEL PEAK 17(17Q25.3) WILD-TYPE" "DEL PEAK 17(17Q25.3) WILD-TYPE" 
                    TCGA-DU-5854                     TCGA-DU-5855 
"DEL PEAK 17(17Q25.3) WILD-TYPE" "DEL PEAK 17(17Q25.3) WILD-TYPE" 
                    TCGA-DU-5870                     TCGA-DU-5871 
"DEL PEAK 17(17Q25.3) WILD-TYPE" "DEL PEAK 17(17Q25.3) WILD-TYPE" 
                    TCGA-DU-5872                     TCGA-DU-5874 
"DEL PEAK 17(17Q25.3) WILD-TYPE" "DEL PEAK 17(17Q25.3) WILD-TYPE" 
                    TCGA-DU-6392                     TCGA-DU-6393 
"DEL PEAK 17(17Q25.3) WILD-TYPE" "DEL PEAK 17(17Q25.3) WILD-TYPE" 
                    TCGA-DU-6394                     TCGA-DU-6395 
"DEL PEAK 17(17Q25.3) WILD-TYPE" "DEL PEAK 17(17Q25.3) WILD-TYPE" 
                    TCGA-DU-6396                     TCGA-DU-6397 
"DEL PEAK 17(17Q25.3) WILD-TYPE" "DEL PEAK 17(17Q25.3) WILD-TYPE" 
                    TCGA-DU-6399                     TCGA-DU-6400 
"DEL PEAK 17(17Q25.3) WILD-TYPE"   "DEL PEAK 17(17Q25.3) MUTATED" 
                    TCGA-DU-6401                     TCGA-DU-6402 
"DEL PEAK 17(17Q25.3) WILD-TYPE" "DEL PEAK 17(17Q25.3) WILD-TYPE" 
                    TCGA-DU-6403                     TCGA-DU-6404 
"DEL PEAK 17(17Q25.3) WILD-TYPE" "DEL PEAK 17(17Q25.3) WILD-TYPE" 
                    TCGA-DU-6405                     TCGA-DU-6406 
"DEL PEAK 17(17Q25.3) WILD-TYPE" "DEL PEAK 17(17Q25.3) WILD-TYPE" 
                    TCGA-DU-6407                     TCGA-DU-6408 
"DEL PEAK 17(17Q25.3) WILD-TYPE" "DEL PEAK 17(17Q25.3) WILD-TYPE" 
                    TCGA-DU-6410                     TCGA-DU-6542 
"DEL PEAK 17(17Q25.3) WILD-TYPE" "DEL PEAK 17(17Q25.3) WILD-TYPE" 
                    TCGA-DU-7006                     TCGA-DU-7007 
"DEL PEAK 17(17Q25.3) WILD-TYPE" "DEL PEAK 17(17Q25.3) WILD-TYPE" 
                    TCGA-DU-7008                     TCGA-DU-7009 
"DEL PEAK 17(17Q25.3) WILD-TYPE" "DEL PEAK 17(17Q25.3) WILD-TYPE" 
                    TCGA-DU-7010                     TCGA-DU-7011 
"DEL PEAK 17(17Q25.3) WILD-TYPE" "DEL PEAK 17(17Q25.3) WILD-TYPE" 
                    TCGA-DU-7012                     TCGA-DU-7013 
"DEL PEAK 17(17Q25.3) WILD-TYPE" "DEL PEAK 17(17Q25.3) WILD-TYPE" 
                    TCGA-DU-7014                     TCGA-DU-7015 
"DEL PEAK 17(17Q25.3) WILD-TYPE" "DEL PEAK 17(17Q25.3) WILD-TYPE" 
                    TCGA-DU-7018                     TCGA-DU-7019 
"DEL PEAK 17(17Q25.3) WILD-TYPE"   "DEL PEAK 17(17Q25.3) MUTATED" 
                    TCGA-DU-7290                     TCGA-DU-7292 
"DEL PEAK 17(17Q25.3) WILD-TYPE" "DEL PEAK 17(17Q25.3) WILD-TYPE" 
                    TCGA-DU-7294                     TCGA-DU-7298 
"DEL PEAK 17(17Q25.3) WILD-TYPE" "DEL PEAK 17(17Q25.3) WILD-TYPE" 
                    TCGA-DU-7299                     TCGA-DU-7300 
"DEL PEAK 17(17Q25.3) WILD-TYPE" "DEL PEAK 17(17Q25.3) WILD-TYPE" 
                    TCGA-DU-7301                     TCGA-DU-7302 
"DEL PEAK 17(17Q25.3) WILD-TYPE" "DEL PEAK 17(17Q25.3) WILD-TYPE" 
                    TCGA-DU-7304                     TCGA-DU-7306 
"DEL PEAK 17(17Q25.3) WILD-TYPE" "DEL PEAK 17(17Q25.3) WILD-TYPE" 
                    TCGA-DU-7309                     TCGA-E1-5302 
"DEL PEAK 17(17Q25.3) WILD-TYPE" "DEL PEAK 17(17Q25.3) WILD-TYPE" 
                    TCGA-E1-5303                     TCGA-E1-5304 
"DEL PEAK 17(17Q25.3) WILD-TYPE" "DEL PEAK 17(17Q25.3) WILD-TYPE" 
                    TCGA-E1-5305                     TCGA-E1-5307 
"DEL PEAK 17(17Q25.3) WILD-TYPE" "DEL PEAK 17(17Q25.3) WILD-TYPE" 
                    TCGA-E1-5311                     TCGA-E1-5318 
"DEL PEAK 17(17Q25.3) WILD-TYPE" "DEL PEAK 17(17Q25.3) WILD-TYPE" 
                    TCGA-E1-5319                     TCGA-E1-5322 
"DEL PEAK 17(17Q25.3) WILD-TYPE" "DEL PEAK 17(17Q25.3) WILD-TYPE" 
                    TCGA-EZ-7264                     TCGA-FG-5962 
"DEL PEAK 17(17Q25.3) WILD-TYPE" "DEL PEAK 17(17Q25.3) WILD-TYPE" 
                    TCGA-FG-5963                     TCGA-FG-5964 
"DEL PEAK 17(17Q25.3) WILD-TYPE" "DEL PEAK 17(17Q25.3) WILD-TYPE" 
                    TCGA-FG-5965                     TCGA-FG-6688 
"DEL PEAK 17(17Q25.3) WILD-TYPE" "DEL PEAK 17(17Q25.3) WILD-TYPE" 
                    TCGA-FG-6689                     TCGA-FG-6690 
"DEL PEAK 17(17Q25.3) WILD-TYPE" "DEL PEAK 17(17Q25.3) WILD-TYPE" 
                    TCGA-FG-6691                     TCGA-FG-6692 
"DEL PEAK 17(17Q25.3) WILD-TYPE" "DEL PEAK 17(17Q25.3) WILD-TYPE" 
                    TCGA-FG-7634                     TCGA-FG-7636 
"DEL PEAK 17(17Q25.3) WILD-TYPE" "DEL PEAK 17(17Q25.3) WILD-TYPE" 
                    TCGA-FG-7638                     TCGA-FG-7643 
"DEL PEAK 17(17Q25.3) WILD-TYPE" "DEL PEAK 17(17Q25.3) WILD-TYPE" 
                    TCGA-FN-7833                     TCGA-HT-7467 
"DEL PEAK 17(17Q25.3) WILD-TYPE" "DEL PEAK 17(17Q25.3) WILD-TYPE" 
                    TCGA-HT-7468                     TCGA-HT-7470 
"DEL PEAK 17(17Q25.3) WILD-TYPE" "DEL PEAK 17(17Q25.3) WILD-TYPE" 
                    TCGA-HT-7472                     TCGA-HT-7473 
"DEL PEAK 17(17Q25.3) WILD-TYPE" "DEL PEAK 17(17Q25.3) WILD-TYPE" 
                    TCGA-HT-7474                     TCGA-HT-7475 
"DEL PEAK 17(17Q25.3) WILD-TYPE" "DEL PEAK 17(17Q25.3) WILD-TYPE" 
                    TCGA-HT-7476                     TCGA-HT-7478 
"DEL PEAK 17(17Q25.3) WILD-TYPE" "DEL PEAK 17(17Q25.3) WILD-TYPE" 
                    TCGA-HT-7479                     TCGA-HT-7480 
  "DEL PEAK 17(17Q25.3) MUTATED" "DEL PEAK 17(17Q25.3) WILD-TYPE" 
                    TCGA-HT-7481                     TCGA-HT-7482 
"DEL PEAK 17(17Q25.3) WILD-TYPE" "DEL PEAK 17(17Q25.3) WILD-TYPE" 
                    TCGA-HT-7483                     TCGA-HT-7485 
  "DEL PEAK 17(17Q25.3) MUTATED" "DEL PEAK 17(17Q25.3) WILD-TYPE" 
                    TCGA-HT-7601                     TCGA-HT-7602 
"DEL PEAK 17(17Q25.3) WILD-TYPE" "DEL PEAK 17(17Q25.3) WILD-TYPE" 
                    TCGA-HT-7603                     TCGA-HT-7604 
"DEL PEAK 17(17Q25.3) WILD-TYPE" "DEL PEAK 17(17Q25.3) WILD-TYPE" 
                    TCGA-HT-7605                     TCGA-HT-7606 
"DEL PEAK 17(17Q25.3) WILD-TYPE" "DEL PEAK 17(17Q25.3) WILD-TYPE" 
                    TCGA-HT-7607                     TCGA-HT-7608 
"DEL PEAK 17(17Q25.3) WILD-TYPE" "DEL PEAK 17(17Q25.3) WILD-TYPE" 
                    TCGA-HT-7609                     TCGA-HT-7610 
"DEL PEAK 17(17Q25.3) WILD-TYPE" "DEL PEAK 17(17Q25.3) WILD-TYPE" 
                    TCGA-HW-7486                     TCGA-HW-7487 
"DEL PEAK 17(17Q25.3) WILD-TYPE" "DEL PEAK 17(17Q25.3) WILD-TYPE" 
                    TCGA-HW-7489                     TCGA-HW-7490 
"DEL PEAK 17(17Q25.3) WILD-TYPE" "DEL PEAK 17(17Q25.3) WILD-TYPE" 
                    TCGA-HW-7491                     TCGA-HW-7493 
"DEL PEAK 17(17Q25.3) WILD-TYPE" "DEL PEAK 17(17Q25.3) WILD-TYPE" 
                    TCGA-HW-7495                     TCGA-IK-7675 
"DEL PEAK 17(17Q25.3) WILD-TYPE"   "DEL PEAK 17(17Q25.3) MUTATED" 
                    TCGA-IK-8125 
"DEL PEAK 17(17Q25.3) WILD-TYPE" 
                    TCGA-CS-4938                     TCGA-CS-4941 
"DEL PEAK 17(17Q25.3) WILD-TYPE" "DEL PEAK 17(17Q25.3) WILD-TYPE" 
                    TCGA-CS-4942                     TCGA-CS-4943 
"DEL PEAK 17(17Q25.3) WILD-TYPE" "DEL PEAK 17(17Q25.3) WILD-TYPE" 
                    TCGA-CS-4944                     TCGA-CS-5390 
"DEL PEAK 17(17Q25.3) WILD-TYPE" "DEL PEAK 17(17Q25.3) WILD-TYPE" 
                    TCGA-CS-5393                     TCGA-CS-5394 
"DEL PEAK 17(17Q25.3) WILD-TYPE" "DEL PEAK 17(17Q25.3) WILD-TYPE" 
                    TCGA-CS-5395                     TCGA-CS-5396 
"DEL PEAK 17(17Q25.3) WILD-TYPE" "DEL PEAK 17(17Q25.3) WILD-TYPE" 
                    TCGA-CS-5397                     TCGA-CS-6186 
"DEL PEAK 17(17Q25.3) WILD-TYPE" "DEL PEAK 17(17Q25.3) WILD-TYPE" 
                    TCGA-CS-6188                     TCGA-CS-6290 
"DEL PEAK 17(17Q25.3) WILD-TYPE" "DEL PEAK 17(17Q25.3) WILD-TYPE" 
                    TCGA-CS-6665                     TCGA-CS-6666 
"DEL PEAK 17(17Q25.3) WILD-TYPE" "DEL PEAK 17(17Q25.3) WILD-TYPE" 
                    TCGA-CS-6667                     TCGA-CS-6668 
  "DEL PEAK 17(17Q25.3) MUTATED" "DEL PEAK 17(17Q25.3) WILD-TYPE" 
                    TCGA-CS-6669                     TCGA-CS-6670 
"DEL PEAK 17(17Q25.3) WILD-TYPE" "DEL PEAK 17(17Q25.3) WILD-TYPE" 
                    TCGA-DB-5270                     TCGA-DB-5273 
"DEL PEAK 17(17Q25.3) WILD-TYPE" "DEL PEAK 17(17Q25.3) WILD-TYPE" 
                    TCGA-DB-5274                     TCGA-DB-5275 
"DEL PEAK 17(17Q25.3) WILD-TYPE"   "DEL PEAK 17(17Q25.3) MUTATED" 
                    TCGA-DB-5276                     TCGA-DB-5277 
"DEL PEAK 17(17Q25.3) WILD-TYPE" "DEL PEAK 17(17Q25.3) WILD-TYPE" 
                    TCGA-DB-5278                     TCGA-DB-5279 
"DEL PEAK 17(17Q25.3) WILD-TYPE" "DEL PEAK 17(17Q25.3) WILD-TYPE" 
                    TCGA-DB-5280                     TCGA-DB-5281 
"DEL PEAK 17(17Q25.3) WILD-TYPE" "DEL PEAK 17(17Q25.3) WILD-TYPE" 
                    TCGA-DH-5140                     TCGA-DH-5141 
"DEL PEAK 17(17Q25.3) WILD-TYPE" "DEL PEAK 17(17Q25.3) WILD-TYPE" 
                    TCGA-DH-5142                     TCGA-DH-5143 
"DEL PEAK 17(17Q25.3) WILD-TYPE" "DEL PEAK 17(17Q25.3) WILD-TYPE" 
                    TCGA-DH-5144                     TCGA-DU-5847 
"DEL PEAK 17(17Q25.3) WILD-TYPE" "DEL PEAK 17(17Q25.3) WILD-TYPE" 
                    TCGA-DU-5849                     TCGA-DU-5851 
"DEL PEAK 17(17Q25.3) WILD-TYPE" "DEL PEAK 17(17Q25.3) WILD-TYPE" 
                    TCGA-DU-5852                     TCGA-DU-5853 
"DEL PEAK 17(17Q25.3) WILD-TYPE" "DEL PEAK 17(17Q25.3) WILD-TYPE" 
                    TCGA-DU-5854                     TCGA-DU-5855 
"DEL PEAK 17(17Q25.3) WILD-TYPE" "DEL PEAK 17(17Q25.3) WILD-TYPE" 
                    TCGA-DU-5870                     TCGA-DU-5871 
"DEL PEAK 17(17Q25.3) WILD-TYPE" "DEL PEAK 17(17Q25.3) WILD-TYPE" 
                    TCGA-DU-5872                     TCGA-DU-5874 
"DEL PEAK 17(17Q25.3) WILD-TYPE" "DEL PEAK 17(17Q25.3) WILD-TYPE" 
                    TCGA-DU-6392                     TCGA-DU-6393 
"DEL PEAK 17(17Q25.3) WILD-TYPE" "DEL PEAK 17(17Q25.3) WILD-TYPE" 
                    TCGA-DU-6394                     TCGA-DU-6395 
"DEL PEAK 17(17Q25.3) WILD-TYPE" "DEL PEAK 17(17Q25.3) WILD-TYPE" 
                    TCGA-DU-6396                     TCGA-DU-6397 
"DEL PEAK 17(17Q25.3) WILD-TYPE" "DEL PEAK 17(17Q25.3) WILD-TYPE" 
                    TCGA-DU-6399                     TCGA-DU-6400 
"DEL PEAK 17(17Q25.3) WILD-TYPE"   "DEL PEAK 17(17Q25.3) MUTATED" 
                    TCGA-DU-6401                     TCGA-DU-6402 
"DEL PEAK 17(17Q25.3) WILD-TYPE" "DEL PEAK 17(17Q25.3) WILD-TYPE" 
                    TCGA-DU-6403                     TCGA-DU-6404 
"DEL PEAK 17(17Q25.3) WILD-TYPE" "DEL PEAK 17(17Q25.3) WILD-TYPE" 
                    TCGA-DU-6405                     TCGA-DU-6406 
"DEL PEAK 17(17Q25.3) WILD-TYPE" "DEL PEAK 17(17Q25.3) WILD-TYPE" 
                    TCGA-DU-6407                     TCGA-DU-6408 
"DEL PEAK 17(17Q25.3) WILD-TYPE" "DEL PEAK 17(17Q25.3) WILD-TYPE" 
                    TCGA-DU-6410                     TCGA-DU-6542 
"DEL PEAK 17(17Q25.3) WILD-TYPE" "DEL PEAK 17(17Q25.3) WILD-TYPE" 
                    TCGA-DU-7006                     TCGA-DU-7007 
"DEL PEAK 17(17Q25.3) WILD-TYPE" "DEL PEAK 17(17Q25.3) WILD-TYPE" 
                    TCGA-DU-7008                     TCGA-DU-7009 
"DEL PEAK 17(17Q25.3) WILD-TYPE" "DEL PEAK 17(17Q25.3) WILD-TYPE" 
                    TCGA-DU-7010                     TCGA-DU-7011 
"DEL PEAK 17(17Q25.3) WILD-TYPE" "DEL PEAK 17(17Q25.3) WILD-TYPE" 
                    TCGA-DU-7012                     TCGA-DU-7013 
"DEL PEAK 17(17Q25.3) WILD-TYPE" "DEL PEAK 17(17Q25.3) WILD-TYPE" 
                    TCGA-DU-7014                     TCGA-DU-7015 
"DEL PEAK 17(17Q25.3) WILD-TYPE" "DEL PEAK 17(17Q25.3) WILD-TYPE" 
                    TCGA-DU-7018                     TCGA-DU-7019 
"DEL PEAK 17(17Q25.3) WILD-TYPE"   "DEL PEAK 17(17Q25.3) MUTATED" 
                    TCGA-DU-7290                     TCGA-DU-7292 
"DEL PEAK 17(17Q25.3) WILD-TYPE" "DEL PEAK 17(17Q25.3) WILD-TYPE" 
                    TCGA-DU-7294                     TCGA-DU-7298 
"DEL PEAK 17(17Q25.3) WILD-TYPE" "DEL PEAK 17(17Q25.3) WILD-TYPE" 
                    TCGA-DU-7299                     TCGA-DU-7300 
"DEL PEAK 17(17Q25.3) WILD-TYPE" "DEL PEAK 17(17Q25.3) WILD-TYPE" 
                    TCGA-DU-7301                     TCGA-DU-7302 
"DEL PEAK 17(17Q25.3) WILD-TYPE" "DEL PEAK 17(17Q25.3) WILD-TYPE" 
                    TCGA-DU-7304                     TCGA-DU-7306 
"DEL PEAK 17(17Q25.3) WILD-TYPE" "DEL PEAK 17(17Q25.3) WILD-TYPE" 
                    TCGA-DU-7309                     TCGA-E1-5302 
"DEL PEAK 17(17Q25.3) WILD-TYPE" "DEL PEAK 17(17Q25.3) WILD-TYPE" 
                    TCGA-E1-5303                     TCGA-E1-5304 
"DEL PEAK 17(17Q25.3) WILD-TYPE" "DEL PEAK 17(17Q25.3) WILD-TYPE" 
                    TCGA-E1-5305                     TCGA-E1-5307 
"DEL PEAK 17(17Q25.3) WILD-TYPE" "DEL PEAK 17(17Q25.3) WILD-TYPE" 
                    TCGA-E1-5311                     TCGA-E1-5318 
"DEL PEAK 17(17Q25.3) WILD-TYPE" "DEL PEAK 17(17Q25.3) WILD-TYPE" 
                    TCGA-E1-5319                     TCGA-E1-5322 
"DEL PEAK 17(17Q25.3) WILD-TYPE" "DEL PEAK 17(17Q25.3) WILD-TYPE" 
                    TCGA-EZ-7264                     TCGA-FG-5962 
"DEL PEAK 17(17Q25.3) WILD-TYPE" "DEL PEAK 17(17Q25.3) WILD-TYPE" 
                    TCGA-FG-5963                     TCGA-FG-5964 
"DEL PEAK 17(17Q25.3) WILD-TYPE" "DEL PEAK 17(17Q25.3) WILD-TYPE" 
                    TCGA-FG-5965                     TCGA-FG-6688 
"DEL PEAK 17(17Q25.3) WILD-TYPE" "DEL PEAK 17(17Q25.3) WILD-TYPE" 
                    TCGA-FG-6689                     TCGA-FG-6690 
"DEL PEAK 17(17Q25.3) WILD-TYPE" "DEL PEAK 17(17Q25.3) WILD-TYPE" 
                    TCGA-FG-6691                     TCGA-FG-6692 
"DEL PEAK 17(17Q25.3) WILD-TYPE" "DEL PEAK 17(17Q25.3) WILD-TYPE" 
                    TCGA-FG-7634                     TCGA-FG-7636 
"DEL PEAK 17(17Q25.3) WILD-TYPE" "DEL PEAK 17(17Q25.3) WILD-TYPE" 
                    TCGA-FG-7638                     TCGA-FG-7643 
"DEL PEAK 17(17Q25.3) WILD-TYPE" "DEL PEAK 17(17Q25.3) WILD-TYPE" 
                    TCGA-FN-7833                     TCGA-HT-7467 
"DEL PEAK 17(17Q25.3) WILD-TYPE" "DEL PEAK 17(17Q25.3) WILD-TYPE" 
                    TCGA-HT-7468                     TCGA-HT-7470 
"DEL PEAK 17(17Q25.3) WILD-TYPE" "DEL PEAK 17(17Q25.3) WILD-TYPE" 
                    TCGA-HT-7472                     TCGA-HT-7473 
"DEL PEAK 17(17Q25.3) WILD-TYPE" "DEL PEAK 17(17Q25.3) WILD-TYPE" 
                    TCGA-HT-7474                     TCGA-HT-7475 
"DEL PEAK 17(17Q25.3) WILD-TYPE" "DEL PEAK 17(17Q25.3) WILD-TYPE" 
                    TCGA-HT-7476                     TCGA-HT-7478 
"DEL PEAK 17(17Q25.3) WILD-TYPE" "DEL PEAK 17(17Q25.3) WILD-TYPE" 
                    TCGA-HT-7479                     TCGA-HT-7480 
  "DEL PEAK 17(17Q25.3) MUTATED" "DEL PEAK 17(17Q25.3) WILD-TYPE" 
                    TCGA-HT-7481                     TCGA-HT-7482 
"DEL PEAK 17(17Q25.3) WILD-TYPE" "DEL PEAK 17(17Q25.3) WILD-TYPE" 
                    TCGA-HT-7483                     TCGA-HT-7485 
  "DEL PEAK 17(17Q25.3) MUTATED" "DEL PEAK 17(17Q25.3) WILD-TYPE" 
                    TCGA-HT-7601                     TCGA-HT-7602 
"DEL PEAK 17(17Q25.3) WILD-TYPE" "DEL PEAK 17(17Q25.3) WILD-TYPE" 
                    TCGA-HT-7603                     TCGA-HT-7604 
"DEL PEAK 17(17Q25.3) WILD-TYPE" "DEL PEAK 17(17Q25.3) WILD-TYPE" 
                    TCGA-HT-7605                     TCGA-HT-7606 
"DEL PEAK 17(17Q25.3) WILD-TYPE" "DEL PEAK 17(17Q25.3) WILD-TYPE" 
                    TCGA-HT-7607                     TCGA-HT-7608 
"DEL PEAK 17(17Q25.3) WILD-TYPE" "DEL PEAK 17(17Q25.3) WILD-TYPE" 
                    TCGA-HT-7609                     TCGA-HT-7610 
"DEL PEAK 17(17Q25.3) WILD-TYPE" "DEL PEAK 17(17Q25.3) WILD-TYPE" 
                    TCGA-HW-7486                     TCGA-HW-7487 
"DEL PEAK 17(17Q25.3) WILD-TYPE" "DEL PEAK 17(17Q25.3) WILD-TYPE" 
                    TCGA-HW-7489                     TCGA-HW-7490 
"DEL PEAK 17(17Q25.3) WILD-TYPE" "DEL PEAK 17(17Q25.3) WILD-TYPE" 
                    TCGA-HW-7491                     TCGA-HW-7493 
"DEL PEAK 17(17Q25.3) WILD-TYPE" "DEL PEAK 17(17Q25.3) WILD-TYPE" 
                    TCGA-HW-7495                     TCGA-IK-7675 
"DEL PEAK 17(17Q25.3) WILD-TYPE"   "DEL PEAK 17(17Q25.3) MUTATED" 
                    TCGA-IK-8125 
"DEL PEAK 17(17Q25.3) WILD-TYPE" 
[1] "hr=" "1.3"
D31V2, continuous
D31V3, binary
[1] "tbl2"
                                cls
clus                             [,1] [,2]
  DEL PEAK 17(17Q25.3) MUTATED      2    5
  DEL PEAK 17(17Q25.3) WILD-TYPE   60   78
        clus
vv       DEL PEAK 17(17Q25.3) MUTATED DEL PEAK 17(17Q25.3) WILD-TYPE
  FEMALE                            2                             60
  MALE                              5                             78
D31V4, continuous
D31V5, multiclass
                   clus
vv                  DEL PEAK 17(17Q25.3) MUTATED DEL PEAK 17(17Q25.3) WILD-TYPE
  ASTROCYTOMA                                  2                             48
  OLIGOASTROCYTOMA                             3                             33
  OLIGODENDROGLIOMA                            2                             56
D31V6, binary
[1] "tbl2"
                                cls
clus                             [,1] [,2]
  DEL PEAK 17(17Q25.3) MUTATED      3    4
  DEL PEAK 17(17Q25.3) WILD-TYPE   56   82
     clus
vv    DEL PEAK 17(17Q25.3) MUTATED DEL PEAK 17(17Q25.3) WILD-TYPE
  NO                             4                             82
  YES                            3                             56
D31V7, binary
[1] "tbl2"
                                cls
clus                             [,1] [,2]
  DEL PEAK 17(17Q25.3) MUTATED      4    3
  DEL PEAK 17(17Q25.3) WILD-TYPE   70   68
     clus
vv    DEL PEAK 17(17Q25.3) MUTATED DEL PEAK 17(17Q25.3) WILD-TYPE
  NO                             3                             68
  YES                            4                             70

Clustering(32) Variable = Del Peak 18(18q23) mutation analysis
D32V1, survival
                  TCGA-CS-4938                   TCGA-CS-4941 
"DEL PEAK 18(18Q23) WILD-TYPE" "DEL PEAK 18(18Q23) WILD-TYPE" 
                  TCGA-CS-4942                   TCGA-CS-4943 
"DEL PEAK 18(18Q23) WILD-TYPE" "DEL PEAK 18(18Q23) WILD-TYPE" 
                  TCGA-CS-4944                   TCGA-CS-5390 
"DEL PEAK 18(18Q23) WILD-TYPE" "DEL PEAK 18(18Q23) WILD-TYPE" 
                  TCGA-CS-5393                   TCGA-CS-5394 
"DEL PEAK 18(18Q23) WILD-TYPE" "DEL PEAK 18(18Q23) WILD-TYPE" 
                  TCGA-CS-5395                   TCGA-CS-5396 
"DEL PEAK 18(18Q23) WILD-TYPE"   "DEL PEAK 18(18Q23) MUTATED" 
                  TCGA-CS-5397                   TCGA-CS-6186 
"DEL PEAK 18(18Q23) WILD-TYPE" "DEL PEAK 18(18Q23) WILD-TYPE" 
                  TCGA-CS-6188                   TCGA-CS-6290 
"DEL PEAK 18(18Q23) WILD-TYPE" "DEL PEAK 18(18Q23) WILD-TYPE" 
                  TCGA-CS-6665                   TCGA-CS-6666 
  "DEL PEAK 18(18Q23) MUTATED" "DEL PEAK 18(18Q23) WILD-TYPE" 
                  TCGA-CS-6667                   TCGA-CS-6668 
  "DEL PEAK 18(18Q23) MUTATED" "DEL PEAK 18(18Q23) WILD-TYPE" 
                  TCGA-CS-6669                   TCGA-CS-6670 
"DEL PEAK 18(18Q23) WILD-TYPE" "DEL PEAK 18(18Q23) WILD-TYPE" 
                  TCGA-DB-5270                   TCGA-DB-5273 
"DEL PEAK 18(18Q23) WILD-TYPE" "DEL PEAK 18(18Q23) WILD-TYPE" 
                  TCGA-DB-5274                   TCGA-DB-5275 
"DEL PEAK 18(18Q23) WILD-TYPE"   "DEL PEAK 18(18Q23) MUTATED" 
                  TCGA-DB-5276                   TCGA-DB-5277 
"DEL PEAK 18(18Q23) WILD-TYPE" "DEL PEAK 18(18Q23) WILD-TYPE" 
                  TCGA-DB-5278                   TCGA-DB-5279 
"DEL PEAK 18(18Q23) WILD-TYPE"   "DEL PEAK 18(18Q23) MUTATED" 
                  TCGA-DB-5280                   TCGA-DB-5281 
  "DEL PEAK 18(18Q23) MUTATED" "DEL PEAK 18(18Q23) WILD-TYPE" 
                  TCGA-DH-5140                   TCGA-DH-5141 
  "DEL PEAK 18(18Q23) MUTATED" "DEL PEAK 18(18Q23) WILD-TYPE" 
                  TCGA-DH-5142                   TCGA-DH-5143 
  "DEL PEAK 18(18Q23) MUTATED" "DEL PEAK 18(18Q23) WILD-TYPE" 
                  TCGA-DH-5144                   TCGA-DU-5847 
"DEL PEAK 18(18Q23) WILD-TYPE" "DEL PEAK 18(18Q23) WILD-TYPE" 
                  TCGA-DU-5849                   TCGA-DU-5851 
  "DEL PEAK 18(18Q23) MUTATED"   "DEL PEAK 18(18Q23) MUTATED" 
                  TCGA-DU-5852                   TCGA-DU-5853 
"DEL PEAK 18(18Q23) WILD-TYPE" "DEL PEAK 18(18Q23) WILD-TYPE" 
                  TCGA-DU-5854                   TCGA-DU-5855 
  "DEL PEAK 18(18Q23) MUTATED" "DEL PEAK 18(18Q23) WILD-TYPE" 
                  TCGA-DU-5870                   TCGA-DU-5871 
  "DEL PEAK 18(18Q23) MUTATED" "DEL PEAK 18(18Q23) WILD-TYPE" 
                  TCGA-DU-5872                   TCGA-DU-5874 
"DEL PEAK 18(18Q23) WILD-TYPE" "DEL PEAK 18(18Q23) WILD-TYPE" 
                  TCGA-DU-6392                   TCGA-DU-6393 
"DEL PEAK 18(18Q23) WILD-TYPE"   "DEL PEAK 18(18Q23) MUTATED" 
                  TCGA-DU-6394                   TCGA-DU-6395 
"DEL PEAK 18(18Q23) WILD-TYPE" "DEL PEAK 18(18Q23) WILD-TYPE" 
                  TCGA-DU-6396                   TCGA-DU-6397 
"DEL PEAK 18(18Q23) WILD-TYPE" "DEL PEAK 18(18Q23) WILD-TYPE" 
                  TCGA-DU-6399                   TCGA-DU-6400 
"DEL PEAK 18(18Q23) WILD-TYPE" "DEL PEAK 18(18Q23) WILD-TYPE" 
                  TCGA-DU-6401                   TCGA-DU-6402 
"DEL PEAK 18(18Q23) WILD-TYPE" "DEL PEAK 18(18Q23) WILD-TYPE" 
                  TCGA-DU-6403                   TCGA-DU-6404 
"DEL PEAK 18(18Q23) WILD-TYPE" "DEL PEAK 18(18Q23) WILD-TYPE" 
                  TCGA-DU-6405                   TCGA-DU-6406 
"DEL PEAK 18(18Q23) WILD-TYPE" "DEL PEAK 18(18Q23) WILD-TYPE" 
                  TCGA-DU-6407                   TCGA-DU-6408 
  "DEL PEAK 18(18Q23) MUTATED" "DEL PEAK 18(18Q23) WILD-TYPE" 
                  TCGA-DU-6410                   TCGA-DU-6542 
"DEL PEAK 18(18Q23) WILD-TYPE" "DEL PEAK 18(18Q23) WILD-TYPE" 
                  TCGA-DU-7006                   TCGA-DU-7007 
"DEL PEAK 18(18Q23) WILD-TYPE" "DEL PEAK 18(18Q23) WILD-TYPE" 
                  TCGA-DU-7008                   TCGA-DU-7009 
"DEL PEAK 18(18Q23) WILD-TYPE"   "DEL PEAK 18(18Q23) MUTATED" 
                  TCGA-DU-7010                   TCGA-DU-7011 
"DEL PEAK 18(18Q23) WILD-TYPE" "DEL PEAK 18(18Q23) WILD-TYPE" 
                  TCGA-DU-7012                   TCGA-DU-7013 
  "DEL PEAK 18(18Q23) MUTATED" "DEL PEAK 18(18Q23) WILD-TYPE" 
                  TCGA-DU-7014                   TCGA-DU-7015 
  "DEL PEAK 18(18Q23) MUTATED" "DEL PEAK 18(18Q23) WILD-TYPE" 
                  TCGA-DU-7018                   TCGA-DU-7019 
"DEL PEAK 18(18Q23) WILD-TYPE" "DEL PEAK 18(18Q23) WILD-TYPE" 
                  TCGA-DU-7290                   TCGA-DU-7292 
"DEL PEAK 18(18Q23) WILD-TYPE" "DEL PEAK 18(18Q23) WILD-TYPE" 
                  TCGA-DU-7294                   TCGA-DU-7298 
"DEL PEAK 18(18Q23) WILD-TYPE" "DEL PEAK 18(18Q23) WILD-TYPE" 
                  TCGA-DU-7299                   TCGA-DU-7300 
"DEL PEAK 18(18Q23) WILD-TYPE"   "DEL PEAK 18(18Q23) MUTATED" 
                  TCGA-DU-7301                   TCGA-DU-7302 
"DEL PEAK 18(18Q23) WILD-TYPE" "DEL PEAK 18(18Q23) WILD-TYPE" 
                  TCGA-DU-7304                   TCGA-DU-7306 
"DEL PEAK 18(18Q23) WILD-TYPE" "DEL PEAK 18(18Q23) WILD-TYPE" 
                  TCGA-DU-7309                   TCGA-E1-5302 
"DEL PEAK 18(18Q23) WILD-TYPE" "DEL PEAK 18(18Q23) WILD-TYPE" 
                  TCGA-E1-5303                   TCGA-E1-5304 
"DEL PEAK 18(18Q23) WILD-TYPE" "DEL PEAK 18(18Q23) WILD-TYPE" 
                  TCGA-E1-5305                   TCGA-E1-5307 
"DEL PEAK 18(18Q23) WILD-TYPE"   "DEL PEAK 18(18Q23) MUTATED" 
                  TCGA-E1-5311                   TCGA-E1-5318 
"DEL PEAK 18(18Q23) WILD-TYPE" "DEL PEAK 18(18Q23) WILD-TYPE" 
                  TCGA-E1-5319                   TCGA-E1-5322 
"DEL PEAK 18(18Q23) WILD-TYPE" "DEL PEAK 18(18Q23) WILD-TYPE" 
                  TCGA-EZ-7264                   TCGA-FG-5962 
"DEL PEAK 18(18Q23) WILD-TYPE" "DEL PEAK 18(18Q23) WILD-TYPE" 
                  TCGA-FG-5963                   TCGA-FG-5964 
"DEL PEAK 18(18Q23) WILD-TYPE" "DEL PEAK 18(18Q23) WILD-TYPE" 
                  TCGA-FG-5965                   TCGA-FG-6688 
"DEL PEAK 18(18Q23) WILD-TYPE" "DEL PEAK 18(18Q23) WILD-TYPE" 
                  TCGA-FG-6689                   TCGA-FG-6690 
"DEL PEAK 18(18Q23) WILD-TYPE" "DEL PEAK 18(18Q23) WILD-TYPE" 
                  TCGA-FG-6691                   TCGA-FG-6692 
"DEL PEAK 18(18Q23) WILD-TYPE" "DEL PEAK 18(18Q23) WILD-TYPE" 
                  TCGA-FG-7634                   TCGA-FG-7636 
"DEL PEAK 18(18Q23) WILD-TYPE" "DEL PEAK 18(18Q23) WILD-TYPE" 
                  TCGA-FG-7638                   TCGA-FG-7643 
"DEL PEAK 18(18Q23) WILD-TYPE" "DEL PEAK 18(18Q23) WILD-TYPE" 
                  TCGA-FN-7833                   TCGA-HT-7467 
"DEL PEAK 18(18Q23) WILD-TYPE" "DEL PEAK 18(18Q23) WILD-TYPE" 
                  TCGA-HT-7468                   TCGA-HT-7470 
"DEL PEAK 18(18Q23) WILD-TYPE" "DEL PEAK 18(18Q23) WILD-TYPE" 
                  TCGA-HT-7472                   TCGA-HT-7473 
"DEL PEAK 18(18Q23) WILD-TYPE" "DEL PEAK 18(18Q23) WILD-TYPE" 
                  TCGA-HT-7474                   TCGA-HT-7475 
"DEL PEAK 18(18Q23) WILD-TYPE" "DEL PEAK 18(18Q23) WILD-TYPE" 
                  TCGA-HT-7476                   TCGA-HT-7478 
  "DEL PEAK 18(18Q23) MUTATED" "DEL PEAK 18(18Q23) WILD-TYPE" 
                  TCGA-HT-7479                   TCGA-HT-7480 
"DEL PEAK 18(18Q23) WILD-TYPE"   "DEL PEAK 18(18Q23) MUTATED" 
                  TCGA-HT-7481                   TCGA-HT-7482 
"DEL PEAK 18(18Q23) WILD-TYPE" "DEL PEAK 18(18Q23) WILD-TYPE" 
                  TCGA-HT-7483                   TCGA-HT-7485 
"DEL PEAK 18(18Q23) WILD-TYPE" "DEL PEAK 18(18Q23) WILD-TYPE" 
                  TCGA-HT-7601                   TCGA-HT-7602 
"DEL PEAK 18(18Q23) WILD-TYPE" "DEL PEAK 18(18Q23) WILD-TYPE" 
                  TCGA-HT-7603                   TCGA-HT-7604 
"DEL PEAK 18(18Q23) WILD-TYPE" "DEL PEAK 18(18Q23) WILD-TYPE" 
                  TCGA-HT-7605                   TCGA-HT-7606 
"DEL PEAK 18(18Q23) WILD-TYPE"   "DEL PEAK 18(18Q23) MUTATED" 
                  TCGA-HT-7607                   TCGA-HT-7608 
"DEL PEAK 18(18Q23) WILD-TYPE" "DEL PEAK 18(18Q23) WILD-TYPE" 
                  TCGA-HT-7609                   TCGA-HT-7610 
"DEL PEAK 18(18Q23) WILD-TYPE" "DEL PEAK 18(18Q23) WILD-TYPE" 
                  TCGA-HW-7486                   TCGA-HW-7487 
"DEL PEAK 18(18Q23) WILD-TYPE" "DEL PEAK 18(18Q23) WILD-TYPE" 
                  TCGA-HW-7489                   TCGA-HW-7490 
  "DEL PEAK 18(18Q23) MUTATED" "DEL PEAK 18(18Q23) WILD-TYPE" 
                  TCGA-HW-7491                   TCGA-HW-7493 
  "DEL PEAK 18(18Q23) MUTATED" "DEL PEAK 18(18Q23) WILD-TYPE" 
                  TCGA-HW-7495                   TCGA-IK-7675 
"DEL PEAK 18(18Q23) WILD-TYPE" "DEL PEAK 18(18Q23) WILD-TYPE" 
                  TCGA-IK-8125 
"DEL PEAK 18(18Q23) WILD-TYPE" 
                  TCGA-CS-4938                   TCGA-CS-4941 
"DEL PEAK 18(18Q23) WILD-TYPE" "DEL PEAK 18(18Q23) WILD-TYPE" 
                  TCGA-CS-4942                   TCGA-CS-4943 
"DEL PEAK 18(18Q23) WILD-TYPE" "DEL PEAK 18(18Q23) WILD-TYPE" 
                  TCGA-CS-4944                   TCGA-CS-5390 
"DEL PEAK 18(18Q23) WILD-TYPE" "DEL PEAK 18(18Q23) WILD-TYPE" 
                  TCGA-CS-5393                   TCGA-CS-5394 
"DEL PEAK 18(18Q23) WILD-TYPE" "DEL PEAK 18(18Q23) WILD-TYPE" 
                  TCGA-CS-5395                   TCGA-CS-5396 
"DEL PEAK 18(18Q23) WILD-TYPE"   "DEL PEAK 18(18Q23) MUTATED" 
                  TCGA-CS-5397                   TCGA-CS-6186 
"DEL PEAK 18(18Q23) WILD-TYPE" "DEL PEAK 18(18Q23) WILD-TYPE" 
                  TCGA-CS-6188                   TCGA-CS-6290 
"DEL PEAK 18(18Q23) WILD-TYPE" "DEL PEAK 18(18Q23) WILD-TYPE" 
                  TCGA-CS-6665                   TCGA-CS-6666 
  "DEL PEAK 18(18Q23) MUTATED" "DEL PEAK 18(18Q23) WILD-TYPE" 
                  TCGA-CS-6667                   TCGA-CS-6668 
  "DEL PEAK 18(18Q23) MUTATED" "DEL PEAK 18(18Q23) WILD-TYPE" 
                  TCGA-CS-6669                   TCGA-CS-6670 
"DEL PEAK 18(18Q23) WILD-TYPE" "DEL PEAK 18(18Q23) WILD-TYPE" 
                  TCGA-DB-5270                   TCGA-DB-5273 
"DEL PEAK 18(18Q23) WILD-TYPE" "DEL PEAK 18(18Q23) WILD-TYPE" 
                  TCGA-DB-5274                   TCGA-DB-5275 
"DEL PEAK 18(18Q23) WILD-TYPE"   "DEL PEAK 18(18Q23) MUTATED" 
                  TCGA-DB-5276                   TCGA-DB-5277 
"DEL PEAK 18(18Q23) WILD-TYPE" "DEL PEAK 18(18Q23) WILD-TYPE" 
                  TCGA-DB-5278                   TCGA-DB-5279 
"DEL PEAK 18(18Q23) WILD-TYPE"   "DEL PEAK 18(18Q23) MUTATED" 
                  TCGA-DB-5280                   TCGA-DB-5281 
  "DEL PEAK 18(18Q23) MUTATED" "DEL PEAK 18(18Q23) WILD-TYPE" 
                  TCGA-DH-5140                   TCGA-DH-5141 
  "DEL PEAK 18(18Q23) MUTATED" "DEL PEAK 18(18Q23) WILD-TYPE" 
                  TCGA-DH-5142                   TCGA-DH-5143 
  "DEL PEAK 18(18Q23) MUTATED" "DEL PEAK 18(18Q23) WILD-TYPE" 
                  TCGA-DH-5144                   TCGA-DU-5847 
"DEL PEAK 18(18Q23) WILD-TYPE" "DEL PEAK 18(18Q23) WILD-TYPE" 
                  TCGA-DU-5849                   TCGA-DU-5851 
  "DEL PEAK 18(18Q23) MUTATED"   "DEL PEAK 18(18Q23) MUTATED" 
                  TCGA-DU-5852                   TCGA-DU-5853 
"DEL PEAK 18(18Q23) WILD-TYPE" "DEL PEAK 18(18Q23) WILD-TYPE" 
                  TCGA-DU-5854                   TCGA-DU-5855 
  "DEL PEAK 18(18Q23) MUTATED" "DEL PEAK 18(18Q23) WILD-TYPE" 
                  TCGA-DU-5870                   TCGA-DU-5871 
  "DEL PEAK 18(18Q23) MUTATED" "DEL PEAK 18(18Q23) WILD-TYPE" 
                  TCGA-DU-5872                   TCGA-DU-5874 
"DEL PEAK 18(18Q23) WILD-TYPE" "DEL PEAK 18(18Q23) WILD-TYPE" 
                  TCGA-DU-6392                   TCGA-DU-6393 
"DEL PEAK 18(18Q23) WILD-TYPE"   "DEL PEAK 18(18Q23) MUTATED" 
                  TCGA-DU-6394                   TCGA-DU-6395 
"DEL PEAK 18(18Q23) WILD-TYPE" "DEL PEAK 18(18Q23) WILD-TYPE" 
                  TCGA-DU-6396                   TCGA-DU-6397 
"DEL PEAK 18(18Q23) WILD-TYPE" "DEL PEAK 18(18Q23) WILD-TYPE" 
                  TCGA-DU-6399                   TCGA-DU-6400 
"DEL PEAK 18(18Q23) WILD-TYPE" "DEL PEAK 18(18Q23) WILD-TYPE" 
                  TCGA-DU-6401                   TCGA-DU-6402 
"DEL PEAK 18(18Q23) WILD-TYPE" "DEL PEAK 18(18Q23) WILD-TYPE" 
                  TCGA-DU-6403                   TCGA-DU-6404 
"DEL PEAK 18(18Q23) WILD-TYPE" "DEL PEAK 18(18Q23) WILD-TYPE" 
                  TCGA-DU-6405                   TCGA-DU-6406 
"DEL PEAK 18(18Q23) WILD-TYPE" "DEL PEAK 18(18Q23) WILD-TYPE" 
                  TCGA-DU-6407                   TCGA-DU-6408 
  "DEL PEAK 18(18Q23) MUTATED" "DEL PEAK 18(18Q23) WILD-TYPE" 
                  TCGA-DU-6410                   TCGA-DU-6542 
"DEL PEAK 18(18Q23) WILD-TYPE" "DEL PEAK 18(18Q23) WILD-TYPE" 
                  TCGA-DU-7006                   TCGA-DU-7007 
"DEL PEAK 18(18Q23) WILD-TYPE" "DEL PEAK 18(18Q23) WILD-TYPE" 
                  TCGA-DU-7008                   TCGA-DU-7009 
"DEL PEAK 18(18Q23) WILD-TYPE"   "DEL PEAK 18(18Q23) MUTATED" 
                  TCGA-DU-7010                   TCGA-DU-7011 
"DEL PEAK 18(18Q23) WILD-TYPE" "DEL PEAK 18(18Q23) WILD-TYPE" 
                  TCGA-DU-7012                   TCGA-DU-7013 
  "DEL PEAK 18(18Q23) MUTATED" "DEL PEAK 18(18Q23) WILD-TYPE" 
                  TCGA-DU-7014                   TCGA-DU-7015 
  "DEL PEAK 18(18Q23) MUTATED" "DEL PEAK 18(18Q23) WILD-TYPE" 
                  TCGA-DU-7018                   TCGA-DU-7019 
"DEL PEAK 18(18Q23) WILD-TYPE" "DEL PEAK 18(18Q23) WILD-TYPE" 
                  TCGA-DU-7290                   TCGA-DU-7292 
"DEL PEAK 18(18Q23) WILD-TYPE" "DEL PEAK 18(18Q23) WILD-TYPE" 
                  TCGA-DU-7294                   TCGA-DU-7298 
"DEL PEAK 18(18Q23) WILD-TYPE" "DEL PEAK 18(18Q23) WILD-TYPE" 
                  TCGA-DU-7299                   TCGA-DU-7300 
"DEL PEAK 18(18Q23) WILD-TYPE"   "DEL PEAK 18(18Q23) MUTATED" 
                  TCGA-DU-7301                   TCGA-DU-7302 
"DEL PEAK 18(18Q23) WILD-TYPE" "DEL PEAK 18(18Q23) WILD-TYPE" 
                  TCGA-DU-7304                   TCGA-DU-7306 
"DEL PEAK 18(18Q23) WILD-TYPE" "DEL PEAK 18(18Q23) WILD-TYPE" 
                  TCGA-DU-7309                   TCGA-E1-5302 
"DEL PEAK 18(18Q23) WILD-TYPE" "DEL PEAK 18(18Q23) WILD-TYPE" 
                  TCGA-E1-5303                   TCGA-E1-5304 
"DEL PEAK 18(18Q23) WILD-TYPE" "DEL PEAK 18(18Q23) WILD-TYPE" 
                  TCGA-E1-5305                   TCGA-E1-5307 
"DEL PEAK 18(18Q23) WILD-TYPE"   "DEL PEAK 18(18Q23) MUTATED" 
                  TCGA-E1-5311                   TCGA-E1-5318 
"DEL PEAK 18(18Q23) WILD-TYPE" "DEL PEAK 18(18Q23) WILD-TYPE" 
                  TCGA-E1-5319                   TCGA-E1-5322 
"DEL PEAK 18(18Q23) WILD-TYPE" "DEL PEAK 18(18Q23) WILD-TYPE" 
                  TCGA-EZ-7264                   TCGA-FG-5962 
"DEL PEAK 18(18Q23) WILD-TYPE" "DEL PEAK 18(18Q23) WILD-TYPE" 
                  TCGA-FG-5963                   TCGA-FG-5964 
"DEL PEAK 18(18Q23) WILD-TYPE" "DEL PEAK 18(18Q23) WILD-TYPE" 
                  TCGA-FG-5965                   TCGA-FG-6688 
"DEL PEAK 18(18Q23) WILD-TYPE" "DEL PEAK 18(18Q23) WILD-TYPE" 
                  TCGA-FG-6689                   TCGA-FG-6690 
"DEL PEAK 18(18Q23) WILD-TYPE" "DEL PEAK 18(18Q23) WILD-TYPE" 
                  TCGA-FG-6691                   TCGA-FG-6692 
"DEL PEAK 18(18Q23) WILD-TYPE" "DEL PEAK 18(18Q23) WILD-TYPE" 
                  TCGA-FG-7634                   TCGA-FG-7636 
"DEL PEAK 18(18Q23) WILD-TYPE" "DEL PEAK 18(18Q23) WILD-TYPE" 
                  TCGA-FG-7638                   TCGA-FG-7643 
"DEL PEAK 18(18Q23) WILD-TYPE" "DEL PEAK 18(18Q23) WILD-TYPE" 
                  TCGA-FN-7833                   TCGA-HT-7467 
"DEL PEAK 18(18Q23) WILD-TYPE" "DEL PEAK 18(18Q23) WILD-TYPE" 
                  TCGA-HT-7468                   TCGA-HT-7470 
"DEL PEAK 18(18Q23) WILD-TYPE" "DEL PEAK 18(18Q23) WILD-TYPE" 
                  TCGA-HT-7472                   TCGA-HT-7473 
"DEL PEAK 18(18Q23) WILD-TYPE" "DEL PEAK 18(18Q23) WILD-TYPE" 
                  TCGA-HT-7474                   TCGA-HT-7475 
"DEL PEAK 18(18Q23) WILD-TYPE" "DEL PEAK 18(18Q23) WILD-TYPE" 
                  TCGA-HT-7476                   TCGA-HT-7478 
  "DEL PEAK 18(18Q23) MUTATED" "DEL PEAK 18(18Q23) WILD-TYPE" 
                  TCGA-HT-7479                   TCGA-HT-7480 
"DEL PEAK 18(18Q23) WILD-TYPE"   "DEL PEAK 18(18Q23) MUTATED" 
                  TCGA-HT-7481                   TCGA-HT-7482 
"DEL PEAK 18(18Q23) WILD-TYPE" "DEL PEAK 18(18Q23) WILD-TYPE" 
                  TCGA-HT-7483                   TCGA-HT-7485 
"DEL PEAK 18(18Q23) WILD-TYPE" "DEL PEAK 18(18Q23) WILD-TYPE" 
                  TCGA-HT-7601                   TCGA-HT-7602 
"DEL PEAK 18(18Q23) WILD-TYPE" "DEL PEAK 18(18Q23) WILD-TYPE" 
                  TCGA-HT-7603                   TCGA-HT-7604 
"DEL PEAK 18(18Q23) WILD-TYPE" "DEL PEAK 18(18Q23) WILD-TYPE" 
                  TCGA-HT-7605                   TCGA-HT-7606 
"DEL PEAK 18(18Q23) WILD-TYPE"   "DEL PEAK 18(18Q23) MUTATED" 
                  TCGA-HT-7607                   TCGA-HT-7608 
"DEL PEAK 18(18Q23) WILD-TYPE" "DEL PEAK 18(18Q23) WILD-TYPE" 
                  TCGA-HT-7609                   TCGA-HT-7610 
"DEL PEAK 18(18Q23) WILD-TYPE" "DEL PEAK 18(18Q23) WILD-TYPE" 
                  TCGA-HW-7486                   TCGA-HW-7487 
"DEL PEAK 18(18Q23) WILD-TYPE" "DEL PEAK 18(18Q23) WILD-TYPE" 
                  TCGA-HW-7489                   TCGA-HW-7490 
  "DEL PEAK 18(18Q23) MUTATED" "DEL PEAK 18(18Q23) WILD-TYPE" 
                  TCGA-HW-7491                   TCGA-HW-7493 
  "DEL PEAK 18(18Q23) MUTATED" "DEL PEAK 18(18Q23) WILD-TYPE" 
                  TCGA-HW-7495                   TCGA-IK-7675 
"DEL PEAK 18(18Q23) WILD-TYPE" "DEL PEAK 18(18Q23) WILD-TYPE" 
                  TCGA-IK-8125 
"DEL PEAK 18(18Q23) WILD-TYPE" 
                  TCGA-CS-4938                   TCGA-CS-4941 
"DEL PEAK 18(18Q23) WILD-TYPE" "DEL PEAK 18(18Q23) WILD-TYPE" 
                  TCGA-CS-4942                   TCGA-CS-4943 
"DEL PEAK 18(18Q23) WILD-TYPE" "DEL PEAK 18(18Q23) WILD-TYPE" 
                  TCGA-CS-4944                   TCGA-CS-5390 
"DEL PEAK 18(18Q23) WILD-TYPE" "DEL PEAK 18(18Q23) WILD-TYPE" 
                  TCGA-CS-5393                   TCGA-CS-5394 
"DEL PEAK 18(18Q23) WILD-TYPE" "DEL PEAK 18(18Q23) WILD-TYPE" 
                  TCGA-CS-5395                   TCGA-CS-5396 
"DEL PEAK 18(18Q23) WILD-TYPE"   "DEL PEAK 18(18Q23) MUTATED" 
                  TCGA-CS-5397                   TCGA-CS-6186 
"DEL PEAK 18(18Q23) WILD-TYPE" "DEL PEAK 18(18Q23) WILD-TYPE" 
                  TCGA-CS-6188                   TCGA-CS-6290 
"DEL PEAK 18(18Q23) WILD-TYPE" "DEL PEAK 18(18Q23) WILD-TYPE" 
                  TCGA-CS-6665                   TCGA-CS-6666 
  "DEL PEAK 18(18Q23) MUTATED" "DEL PEAK 18(18Q23) WILD-TYPE" 
                  TCGA-CS-6667                   TCGA-CS-6668 
  "DEL PEAK 18(18Q23) MUTATED" "DEL PEAK 18(18Q23) WILD-TYPE" 
                  TCGA-CS-6669                   TCGA-CS-6670 
"DEL PEAK 18(18Q23) WILD-TYPE" "DEL PEAK 18(18Q23) WILD-TYPE" 
                  TCGA-DB-5270                   TCGA-DB-5273 
"DEL PEAK 18(18Q23) WILD-TYPE" "DEL PEAK 18(18Q23) WILD-TYPE" 
                  TCGA-DB-5274                   TCGA-DB-5275 
"DEL PEAK 18(18Q23) WILD-TYPE"   "DEL PEAK 18(18Q23) MUTATED" 
                  TCGA-DB-5276                   TCGA-DB-5277 
"DEL PEAK 18(18Q23) WILD-TYPE" "DEL PEAK 18(18Q23) WILD-TYPE" 
                  TCGA-DB-5278                   TCGA-DB-5279 
"DEL PEAK 18(18Q23) WILD-TYPE"   "DEL PEAK 18(18Q23) MUTATED" 
                  TCGA-DB-5280                   TCGA-DB-5281 
  "DEL PEAK 18(18Q23) MUTATED" "DEL PEAK 18(18Q23) WILD-TYPE" 
                  TCGA-DH-5140                   TCGA-DH-5141 
  "DEL PEAK 18(18Q23) MUTATED" "DEL PEAK 18(18Q23) WILD-TYPE" 
                  TCGA-DH-5142                   TCGA-DH-5143 
  "DEL PEAK 18(18Q23) MUTATED" "DEL PEAK 18(18Q23) WILD-TYPE" 
                  TCGA-DH-5144                   TCGA-DU-5847 
"DEL PEAK 18(18Q23) WILD-TYPE" "DEL PEAK 18(18Q23) WILD-TYPE" 
                  TCGA-DU-5849                   TCGA-DU-5851 
  "DEL PEAK 18(18Q23) MUTATED"   "DEL PEAK 18(18Q23) MUTATED" 
                  TCGA-DU-5852                   TCGA-DU-5853 
"DEL PEAK 18(18Q23) WILD-TYPE" "DEL PEAK 18(18Q23) WILD-TYPE" 
                  TCGA-DU-5854                   TCGA-DU-5855 
  "DEL PEAK 18(18Q23) MUTATED" "DEL PEAK 18(18Q23) WILD-TYPE" 
                  TCGA-DU-5870                   TCGA-DU-5871 
  "DEL PEAK 18(18Q23) MUTATED" "DEL PEAK 18(18Q23) WILD-TYPE" 
                  TCGA-DU-5872                   TCGA-DU-5874 
"DEL PEAK 18(18Q23) WILD-TYPE" "DEL PEAK 18(18Q23) WILD-TYPE" 
                  TCGA-DU-6392                   TCGA-DU-6393 
"DEL PEAK 18(18Q23) WILD-TYPE"   "DEL PEAK 18(18Q23) MUTATED" 
                  TCGA-DU-6394                   TCGA-DU-6395 
"DEL PEAK 18(18Q23) WILD-TYPE" "DEL PEAK 18(18Q23) WILD-TYPE" 
                  TCGA-DU-6396                   TCGA-DU-6397 
"DEL PEAK 18(18Q23) WILD-TYPE" "DEL PEAK 18(18Q23) WILD-TYPE" 
                  TCGA-DU-6399                   TCGA-DU-6400 
"DEL PEAK 18(18Q23) WILD-TYPE" "DEL PEAK 18(18Q23) WILD-TYPE" 
                  TCGA-DU-6401                   TCGA-DU-6402 
"DEL PEAK 18(18Q23) WILD-TYPE" "DEL PEAK 18(18Q23) WILD-TYPE" 
                  TCGA-DU-6403                   TCGA-DU-6404 
"DEL PEAK 18(18Q23) WILD-TYPE" "DEL PEAK 18(18Q23) WILD-TYPE" 
                  TCGA-DU-6405                   TCGA-DU-6406 
"DEL PEAK 18(18Q23) WILD-TYPE" "DEL PEAK 18(18Q23) WILD-TYPE" 
                  TCGA-DU-6407                   TCGA-DU-6408 
  "DEL PEAK 18(18Q23) MUTATED" "DEL PEAK 18(18Q23) WILD-TYPE" 
                  TCGA-DU-6410                   TCGA-DU-6542 
"DEL PEAK 18(18Q23) WILD-TYPE" "DEL PEAK 18(18Q23) WILD-TYPE" 
                  TCGA-DU-7006                   TCGA-DU-7007 
"DEL PEAK 18(18Q23) WILD-TYPE" "DEL PEAK 18(18Q23) WILD-TYPE" 
                  TCGA-DU-7008                   TCGA-DU-7009 
"DEL PEAK 18(18Q23) WILD-TYPE"   "DEL PEAK 18(18Q23) MUTATED" 
                  TCGA-DU-7010                   TCGA-DU-7011 
"DEL PEAK 18(18Q23) WILD-TYPE" "DEL PEAK 18(18Q23) WILD-TYPE" 
                  TCGA-DU-7012                   TCGA-DU-7013 
  "DEL PEAK 18(18Q23) MUTATED" "DEL PEAK 18(18Q23) WILD-TYPE" 
                  TCGA-DU-7014                   TCGA-DU-7015 
  "DEL PEAK 18(18Q23) MUTATED" "DEL PEAK 18(18Q23) WILD-TYPE" 
                  TCGA-DU-7018                   TCGA-DU-7019 
"DEL PEAK 18(18Q23) WILD-TYPE" "DEL PEAK 18(18Q23) WILD-TYPE" 
                  TCGA-DU-7290                   TCGA-DU-7292 
"DEL PEAK 18(18Q23) WILD-TYPE" "DEL PEAK 18(18Q23) WILD-TYPE" 
                  TCGA-DU-7294                   TCGA-DU-7298 
"DEL PEAK 18(18Q23) WILD-TYPE" "DEL PEAK 18(18Q23) WILD-TYPE" 
                  TCGA-DU-7299                   TCGA-DU-7300 
"DEL PEAK 18(18Q23) WILD-TYPE"   "DEL PEAK 18(18Q23) MUTATED" 
                  TCGA-DU-7301                   TCGA-DU-7302 
"DEL PEAK 18(18Q23) WILD-TYPE" "DEL PEAK 18(18Q23) WILD-TYPE" 
                  TCGA-DU-7304                   TCGA-DU-7306 
"DEL PEAK 18(18Q23) WILD-TYPE" "DEL PEAK 18(18Q23) WILD-TYPE" 
                  TCGA-DU-7309                   TCGA-E1-5302 
"DEL PEAK 18(18Q23) WILD-TYPE" "DEL PEAK 18(18Q23) WILD-TYPE" 
                  TCGA-E1-5303                   TCGA-E1-5304 
"DEL PEAK 18(18Q23) WILD-TYPE" "DEL PEAK 18(18Q23) WILD-TYPE" 
                  TCGA-E1-5305                   TCGA-E1-5307 
"DEL PEAK 18(18Q23) WILD-TYPE"   "DEL PEAK 18(18Q23) MUTATED" 
                  TCGA-E1-5311                   TCGA-E1-5318 
"DEL PEAK 18(18Q23) WILD-TYPE" "DEL PEAK 18(18Q23) WILD-TYPE" 
                  TCGA-E1-5319                   TCGA-E1-5322 
"DEL PEAK 18(18Q23) WILD-TYPE" "DEL PEAK 18(18Q23) WILD-TYPE" 
                  TCGA-EZ-7264                   TCGA-FG-5962 
"DEL PEAK 18(18Q23) WILD-TYPE" "DEL PEAK 18(18Q23) WILD-TYPE" 
                  TCGA-FG-5963                   TCGA-FG-5964 
"DEL PEAK 18(18Q23) WILD-TYPE" "DEL PEAK 18(18Q23) WILD-TYPE" 
                  TCGA-FG-5965                   TCGA-FG-6688 
"DEL PEAK 18(18Q23) WILD-TYPE" "DEL PEAK 18(18Q23) WILD-TYPE" 
                  TCGA-FG-6689                   TCGA-FG-6690 
"DEL PEAK 18(18Q23) WILD-TYPE" "DEL PEAK 18(18Q23) WILD-TYPE" 
                  TCGA-FG-6691                   TCGA-FG-6692 
"DEL PEAK 18(18Q23) WILD-TYPE" "DEL PEAK 18(18Q23) WILD-TYPE" 
                  TCGA-FG-7634                   TCGA-FG-7636 
"DEL PEAK 18(18Q23) WILD-TYPE" "DEL PEAK 18(18Q23) WILD-TYPE" 
                  TCGA-FG-7638                   TCGA-FG-7643 
"DEL PEAK 18(18Q23) WILD-TYPE" "DEL PEAK 18(18Q23) WILD-TYPE" 
                  TCGA-FN-7833                   TCGA-HT-7467 
"DEL PEAK 18(18Q23) WILD-TYPE" "DEL PEAK 18(18Q23) WILD-TYPE" 
                  TCGA-HT-7468                   TCGA-HT-7470 
"DEL PEAK 18(18Q23) WILD-TYPE" "DEL PEAK 18(18Q23) WILD-TYPE" 
                  TCGA-HT-7472                   TCGA-HT-7473 
"DEL PEAK 18(18Q23) WILD-TYPE" "DEL PEAK 18(18Q23) WILD-TYPE" 
                  TCGA-HT-7474                   TCGA-HT-7475 
"DEL PEAK 18(18Q23) WILD-TYPE" "DEL PEAK 18(18Q23) WILD-TYPE" 
                  TCGA-HT-7476                   TCGA-HT-7478 
  "DEL PEAK 18(18Q23) MUTATED" "DEL PEAK 18(18Q23) WILD-TYPE" 
                  TCGA-HT-7479                   TCGA-HT-7480 
"DEL PEAK 18(18Q23) WILD-TYPE"   "DEL PEAK 18(18Q23) MUTATED" 
                  TCGA-HT-7481                   TCGA-HT-7482 
"DEL PEAK 18(18Q23) WILD-TYPE" "DEL PEAK 18(18Q23) WILD-TYPE" 
                  TCGA-HT-7483                   TCGA-HT-7485 
"DEL PEAK 18(18Q23) WILD-TYPE" "DEL PEAK 18(18Q23) WILD-TYPE" 
                  TCGA-HT-7601                   TCGA-HT-7602 
"DEL PEAK 18(18Q23) WILD-TYPE" "DEL PEAK 18(18Q23) WILD-TYPE" 
                  TCGA-HT-7603                   TCGA-HT-7604 
"DEL PEAK 18(18Q23) WILD-TYPE" "DEL PEAK 18(18Q23) WILD-TYPE" 
                  TCGA-HT-7605                   TCGA-HT-7606 
"DEL PEAK 18(18Q23) WILD-TYPE"   "DEL PEAK 18(18Q23) MUTATED" 
                  TCGA-HT-7607                   TCGA-HT-7608 
"DEL PEAK 18(18Q23) WILD-TYPE" "DEL PEAK 18(18Q23) WILD-TYPE" 
                  TCGA-HT-7609                   TCGA-HT-7610 
"DEL PEAK 18(18Q23) WILD-TYPE" "DEL PEAK 18(18Q23) WILD-TYPE" 
                  TCGA-HW-7486                   TCGA-HW-7487 
"DEL PEAK 18(18Q23) WILD-TYPE" "DEL PEAK 18(18Q23) WILD-TYPE" 
                  TCGA-HW-7489                   TCGA-HW-7490 
  "DEL PEAK 18(18Q23) MUTATED" "DEL PEAK 18(18Q23) WILD-TYPE" 
                  TCGA-HW-7491                   TCGA-HW-7493 
  "DEL PEAK 18(18Q23) MUTATED" "DEL PEAK 18(18Q23) WILD-TYPE" 
                  TCGA-HW-7495                   TCGA-IK-7675 
"DEL PEAK 18(18Q23) WILD-TYPE" "DEL PEAK 18(18Q23) WILD-TYPE" 
                  TCGA-IK-8125 
"DEL PEAK 18(18Q23) WILD-TYPE" 
[1] "hr=" "1.5"
D32V2, continuous
D32V3, binary
[1] "tbl2"
                              cls
clus                           [,1] [,2]
  DEL PEAK 18(18Q23) MUTATED     13   11
  DEL PEAK 18(18Q23) WILD-TYPE   49   72
        clus
vv       DEL PEAK 18(18Q23) MUTATED DEL PEAK 18(18Q23) WILD-TYPE
  FEMALE                         13                           49
  MALE                           11                           72
D32V4, continuous
D32V5, multiclass
                   clus
vv                  DEL PEAK 18(18Q23) MUTATED DEL PEAK 18(18Q23) WILD-TYPE
  ASTROCYTOMA                                8                           42
  OLIGOASTROCYTOMA                           5                           31
  OLIGODENDROGLIOMA                         11                           47
D32V6, binary
[1] "tbl2"
                              cls
clus                           [,1] [,2]
  DEL PEAK 18(18Q23) MUTATED      6   18
  DEL PEAK 18(18Q23) WILD-TYPE   53   68
     clus
vv    DEL PEAK 18(18Q23) MUTATED DEL PEAK 18(18Q23) WILD-TYPE
  NO                          18                           68
  YES                          6                           53
D32V7, binary
[1] "tbl2"
                              cls
clus                           [,1] [,2]
  DEL PEAK 18(18Q23) MUTATED     10   14
  DEL PEAK 18(18Q23) WILD-TYPE   64   57
     clus
vv    DEL PEAK 18(18Q23) MUTATED DEL PEAK 18(18Q23) WILD-TYPE
  NO                          14                           57
  YES                         10                           64

Clustering(33) Variable = Del Peak 19(19q13.43) mutation analysis
D33V1, survival
                     TCGA-CS-4938                      TCGA-CS-4941 
"DEL PEAK 19(19Q13.43) WILD-TYPE" "DEL PEAK 19(19Q13.43) WILD-TYPE" 
                     TCGA-CS-4942                      TCGA-CS-4943 
  "DEL PEAK 19(19Q13.43) MUTATED"   "DEL PEAK 19(19Q13.43) MUTATED" 
                     TCGA-CS-4944                      TCGA-CS-5390 
  "DEL PEAK 19(19Q13.43) MUTATED"   "DEL PEAK 19(19Q13.43) MUTATED" 
                     TCGA-CS-5393                      TCGA-CS-5394 
"DEL PEAK 19(19Q13.43) WILD-TYPE"   "DEL PEAK 19(19Q13.43) MUTATED" 
                     TCGA-CS-5395                      TCGA-CS-5396 
"DEL PEAK 19(19Q13.43) WILD-TYPE"   "DEL PEAK 19(19Q13.43) MUTATED" 
                     TCGA-CS-5397                      TCGA-CS-6186 
"DEL PEAK 19(19Q13.43) WILD-TYPE" "DEL PEAK 19(19Q13.43) WILD-TYPE" 
                     TCGA-CS-6188                      TCGA-CS-6290 
"DEL PEAK 19(19Q13.43) WILD-TYPE"   "DEL PEAK 19(19Q13.43) MUTATED" 
                     TCGA-CS-6665                      TCGA-CS-6666 
"DEL PEAK 19(19Q13.43) WILD-TYPE"   "DEL PEAK 19(19Q13.43) MUTATED" 
                     TCGA-CS-6667                      TCGA-CS-6668 
"DEL PEAK 19(19Q13.43) WILD-TYPE"   "DEL PEAK 19(19Q13.43) MUTATED" 
                     TCGA-CS-6669                      TCGA-CS-6670 
"DEL PEAK 19(19Q13.43) WILD-TYPE"   "DEL PEAK 19(19Q13.43) MUTATED" 
                     TCGA-DB-5270                      TCGA-DB-5273 
  "DEL PEAK 19(19Q13.43) MUTATED"   "DEL PEAK 19(19Q13.43) MUTATED" 
                     TCGA-DB-5274                      TCGA-DB-5275 
  "DEL PEAK 19(19Q13.43) MUTATED"   "DEL PEAK 19(19Q13.43) MUTATED" 
                     TCGA-DB-5276                      TCGA-DB-5277 
"DEL PEAK 19(19Q13.43) WILD-TYPE"   "DEL PEAK 19(19Q13.43) MUTATED" 
                     TCGA-DB-5278                      TCGA-DB-5279 
  "DEL PEAK 19(19Q13.43) MUTATED"   "DEL PEAK 19(19Q13.43) MUTATED" 
                     TCGA-DB-5280                      TCGA-DB-5281 
"DEL PEAK 19(19Q13.43) WILD-TYPE" "DEL PEAK 19(19Q13.43) WILD-TYPE" 
                     TCGA-DH-5140                      TCGA-DH-5141 
  "DEL PEAK 19(19Q13.43) MUTATED"   "DEL PEAK 19(19Q13.43) MUTATED" 
                     TCGA-DH-5142                      TCGA-DH-5143 
  "DEL PEAK 19(19Q13.43) MUTATED" "DEL PEAK 19(19Q13.43) WILD-TYPE" 
                     TCGA-DH-5144                      TCGA-DU-5847 
  "DEL PEAK 19(19Q13.43) MUTATED" "DEL PEAK 19(19Q13.43) WILD-TYPE" 
                     TCGA-DU-5849                      TCGA-DU-5851 
  "DEL PEAK 19(19Q13.43) MUTATED"   "DEL PEAK 19(19Q13.43) MUTATED" 
                     TCGA-DU-5852                      TCGA-DU-5853 
"DEL PEAK 19(19Q13.43) WILD-TYPE" "DEL PEAK 19(19Q13.43) WILD-TYPE" 
                     TCGA-DU-5854                      TCGA-DU-5855 
"DEL PEAK 19(19Q13.43) WILD-TYPE"   "DEL PEAK 19(19Q13.43) MUTATED" 
                     TCGA-DU-5870                      TCGA-DU-5871 
  "DEL PEAK 19(19Q13.43) MUTATED" "DEL PEAK 19(19Q13.43) WILD-TYPE" 
                     TCGA-DU-5872                      TCGA-DU-5874 
  "DEL PEAK 19(19Q13.43) MUTATED"   "DEL PEAK 19(19Q13.43) MUTATED" 
                     TCGA-DU-6392                      TCGA-DU-6393 
"DEL PEAK 19(19Q13.43) WILD-TYPE"   "DEL PEAK 19(19Q13.43) MUTATED" 
                     TCGA-DU-6394                      TCGA-DU-6395 
  "DEL PEAK 19(19Q13.43) MUTATED" "DEL PEAK 19(19Q13.43) WILD-TYPE" 
                     TCGA-DU-6396                      TCGA-DU-6397 
  "DEL PEAK 19(19Q13.43) MUTATED"   "DEL PEAK 19(19Q13.43) MUTATED" 
                     TCGA-DU-6399                      TCGA-DU-6400 
  "DEL PEAK 19(19Q13.43) MUTATED"   "DEL PEAK 19(19Q13.43) MUTATED" 
                     TCGA-DU-6401                      TCGA-DU-6402 
"DEL PEAK 19(19Q13.43) WILD-TYPE" "DEL PEAK 19(19Q13.43) WILD-TYPE" 
                     TCGA-DU-6403                      TCGA-DU-6404 
"DEL PEAK 19(19Q13.43) WILD-TYPE" "DEL PEAK 19(19Q13.43) WILD-TYPE" 
                     TCGA-DU-6405                      TCGA-DU-6406 
"DEL PEAK 19(19Q13.43) WILD-TYPE" "DEL PEAK 19(19Q13.43) WILD-TYPE" 
                     TCGA-DU-6407                      TCGA-DU-6408 
"DEL PEAK 19(19Q13.43) WILD-TYPE"   "DEL PEAK 19(19Q13.43) MUTATED" 
                     TCGA-DU-6410                      TCGA-DU-6542 
  "DEL PEAK 19(19Q13.43) MUTATED"   "DEL PEAK 19(19Q13.43) MUTATED" 
                     TCGA-DU-7006                      TCGA-DU-7007 
"DEL PEAK 19(19Q13.43) WILD-TYPE"   "DEL PEAK 19(19Q13.43) MUTATED" 
                     TCGA-DU-7008                      TCGA-DU-7009 
"DEL PEAK 19(19Q13.43) WILD-TYPE"   "DEL PEAK 19(19Q13.43) MUTATED" 
                     TCGA-DU-7010                      TCGA-DU-7011 
  "DEL PEAK 19(19Q13.43) MUTATED" "DEL PEAK 19(19Q13.43) WILD-TYPE" 
                     TCGA-DU-7012                      TCGA-DU-7013 
  "DEL PEAK 19(19Q13.43) MUTATED" "DEL PEAK 19(19Q13.43) WILD-TYPE" 
                     TCGA-DU-7014                      TCGA-DU-7015 
  "DEL PEAK 19(19Q13.43) MUTATED"   "DEL PEAK 19(19Q13.43) MUTATED" 
                     TCGA-DU-7018                      TCGA-DU-7019 
  "DEL PEAK 19(19Q13.43) MUTATED" "DEL PEAK 19(19Q13.43) WILD-TYPE" 
                     TCGA-DU-7290                      TCGA-DU-7292 
"DEL PEAK 19(19Q13.43) WILD-TYPE" "DEL PEAK 19(19Q13.43) WILD-TYPE" 
                     TCGA-DU-7294                      TCGA-DU-7298 
  "DEL PEAK 19(19Q13.43) MUTATED"   "DEL PEAK 19(19Q13.43) MUTATED" 
                     TCGA-DU-7299                      TCGA-DU-7300 
"DEL PEAK 19(19Q13.43) WILD-TYPE"   "DEL PEAK 19(19Q13.43) MUTATED" 
                     TCGA-DU-7301                      TCGA-DU-7302 
"DEL PEAK 19(19Q13.43) WILD-TYPE"   "DEL PEAK 19(19Q13.43) MUTATED" 
                     TCGA-DU-7304                      TCGA-DU-7306 
"DEL PEAK 19(19Q13.43) WILD-TYPE"   "DEL PEAK 19(19Q13.43) MUTATED" 
                     TCGA-DU-7309                      TCGA-E1-5302 
  "DEL PEAK 19(19Q13.43) MUTATED"   "DEL PEAK 19(19Q13.43) MUTATED" 
                     TCGA-E1-5303                      TCGA-E1-5304 
"DEL PEAK 19(19Q13.43) WILD-TYPE"   "DEL PEAK 19(19Q13.43) MUTATED" 
                     TCGA-E1-5305                      TCGA-E1-5307 
  "DEL PEAK 19(19Q13.43) MUTATED" "DEL PEAK 19(19Q13.43) WILD-TYPE" 
                     TCGA-E1-5311                      TCGA-E1-5318 
  "DEL PEAK 19(19Q13.43) MUTATED"   "DEL PEAK 19(19Q13.43) MUTATED" 
                     TCGA-E1-5319                      TCGA-E1-5322 
  "DEL PEAK 19(19Q13.43) MUTATED"   "DEL PEAK 19(19Q13.43) MUTATED" 
                     TCGA-EZ-7264                      TCGA-FG-5962 
  "DEL PEAK 19(19Q13.43) MUTATED"   "DEL PEAK 19(19Q13.43) MUTATED" 
                     TCGA-FG-5963                      TCGA-FG-5964 
"DEL PEAK 19(19Q13.43) WILD-TYPE"   "DEL PEAK 19(19Q13.43) MUTATED" 
                     TCGA-FG-5965                      TCGA-FG-6688 
  "DEL PEAK 19(19Q13.43) MUTATED" "DEL PEAK 19(19Q13.43) WILD-TYPE" 
                     TCGA-FG-6689                      TCGA-FG-6690 
"DEL PEAK 19(19Q13.43) WILD-TYPE"   "DEL PEAK 19(19Q13.43) MUTATED" 
                     TCGA-FG-6691                      TCGA-FG-6692 
"DEL PEAK 19(19Q13.43) WILD-TYPE" "DEL PEAK 19(19Q13.43) WILD-TYPE" 
                     TCGA-FG-7634                      TCGA-FG-7636 
  "DEL PEAK 19(19Q13.43) MUTATED"   "DEL PEAK 19(19Q13.43) MUTATED" 
                     TCGA-FG-7638                      TCGA-FG-7643 
  "DEL PEAK 19(19Q13.43) MUTATED" "DEL PEAK 19(19Q13.43) WILD-TYPE" 
                     TCGA-FN-7833                      TCGA-HT-7467 
"DEL PEAK 19(19Q13.43) WILD-TYPE"   "DEL PEAK 19(19Q13.43) MUTATED" 
                     TCGA-HT-7468                      TCGA-HT-7470 
  "DEL PEAK 19(19Q13.43) MUTATED" "DEL PEAK 19(19Q13.43) WILD-TYPE" 
                     TCGA-HT-7472                      TCGA-HT-7473 
  "DEL PEAK 19(19Q13.43) MUTATED" "DEL PEAK 19(19Q13.43) WILD-TYPE" 
                     TCGA-HT-7474                      TCGA-HT-7475 
"DEL PEAK 19(19Q13.43) WILD-TYPE"   "DEL PEAK 19(19Q13.43) MUTATED" 
                     TCGA-HT-7476                      TCGA-HT-7478 
"DEL PEAK 19(19Q13.43) WILD-TYPE" "DEL PEAK 19(19Q13.43) WILD-TYPE" 
                     TCGA-HT-7479                      TCGA-HT-7480 
"DEL PEAK 19(19Q13.43) WILD-TYPE"   "DEL PEAK 19(19Q13.43) MUTATED" 
                     TCGA-HT-7481                      TCGA-HT-7482 
  "DEL PEAK 19(19Q13.43) MUTATED" "DEL PEAK 19(19Q13.43) WILD-TYPE" 
                     TCGA-HT-7483                      TCGA-HT-7485 
  "DEL PEAK 19(19Q13.43) MUTATED" "DEL PEAK 19(19Q13.43) WILD-TYPE" 
                     TCGA-HT-7601                      TCGA-HT-7602 
  "DEL PEAK 19(19Q13.43) MUTATED" "DEL PEAK 19(19Q13.43) WILD-TYPE" 
                     TCGA-HT-7603                      TCGA-HT-7604 
"DEL PEAK 19(19Q13.43) WILD-TYPE" "DEL PEAK 19(19Q13.43) WILD-TYPE" 
                     TCGA-HT-7605                      TCGA-HT-7606 
  "DEL PEAK 19(19Q13.43) MUTATED"   "DEL PEAK 19(19Q13.43) MUTATED" 
                     TCGA-HT-7607                      TCGA-HT-7608 
  "DEL PEAK 19(19Q13.43) MUTATED"   "DEL PEAK 19(19Q13.43) MUTATED" 
                     TCGA-HT-7609                      TCGA-HT-7610 
  "DEL PEAK 19(19Q13.43) MUTATED"   "DEL PEAK 19(19Q13.43) MUTATED" 
                     TCGA-HW-7486                      TCGA-HW-7487 
  "DEL PEAK 19(19Q13.43) MUTATED"   "DEL PEAK 19(19Q13.43) MUTATED" 
                     TCGA-HW-7489                      TCGA-HW-7490 
"DEL PEAK 19(19Q13.43) WILD-TYPE" "DEL PEAK 19(19Q13.43) WILD-TYPE" 
                     TCGA-HW-7491                      TCGA-HW-7493 
  "DEL PEAK 19(19Q13.43) MUTATED" "DEL PEAK 19(19Q13.43) WILD-TYPE" 
                     TCGA-HW-7495                      TCGA-IK-7675 
  "DEL PEAK 19(19Q13.43) MUTATED" "DEL PEAK 19(19Q13.43) WILD-TYPE" 
                     TCGA-IK-8125 
  "DEL PEAK 19(19Q13.43) MUTATED" 
                     TCGA-CS-4938                      TCGA-CS-4941 
"DEL PEAK 19(19Q13.43) WILD-TYPE" "DEL PEAK 19(19Q13.43) WILD-TYPE" 
                     TCGA-CS-4942                      TCGA-CS-4943 
  "DEL PEAK 19(19Q13.43) MUTATED"   "DEL PEAK 19(19Q13.43) MUTATED" 
                     TCGA-CS-4944                      TCGA-CS-5390 
  "DEL PEAK 19(19Q13.43) MUTATED"   "DEL PEAK 19(19Q13.43) MUTATED" 
                     TCGA-CS-5393                      TCGA-CS-5394 
"DEL PEAK 19(19Q13.43) WILD-TYPE"   "DEL PEAK 19(19Q13.43) MUTATED" 
                     TCGA-CS-5395                      TCGA-CS-5396 
"DEL PEAK 19(19Q13.43) WILD-TYPE"   "DEL PEAK 19(19Q13.43) MUTATED" 
                     TCGA-CS-5397                      TCGA-CS-6186 
"DEL PEAK 19(19Q13.43) WILD-TYPE" "DEL PEAK 19(19Q13.43) WILD-TYPE" 
                     TCGA-CS-6188                      TCGA-CS-6290 
"DEL PEAK 19(19Q13.43) WILD-TYPE"   "DEL PEAK 19(19Q13.43) MUTATED" 
                     TCGA-CS-6665                      TCGA-CS-6666 
"DEL PEAK 19(19Q13.43) WILD-TYPE"   "DEL PEAK 19(19Q13.43) MUTATED" 
                     TCGA-CS-6667                      TCGA-CS-6668 
"DEL PEAK 19(19Q13.43) WILD-TYPE"   "DEL PEAK 19(19Q13.43) MUTATED" 
                     TCGA-CS-6669                      TCGA-CS-6670 
"DEL PEAK 19(19Q13.43) WILD-TYPE"   "DEL PEAK 19(19Q13.43) MUTATED" 
                     TCGA-DB-5270                      TCGA-DB-5273 
  "DEL PEAK 19(19Q13.43) MUTATED"   "DEL PEAK 19(19Q13.43) MUTATED" 
                     TCGA-DB-5274                      TCGA-DB-5275 
  "DEL PEAK 19(19Q13.43) MUTATED"   "DEL PEAK 19(19Q13.43) MUTATED" 
                     TCGA-DB-5276                      TCGA-DB-5277 
"DEL PEAK 19(19Q13.43) WILD-TYPE"   "DEL PEAK 19(19Q13.43) MUTATED" 
                     TCGA-DB-5278                      TCGA-DB-5279 
  "DEL PEAK 19(19Q13.43) MUTATED"   "DEL PEAK 19(19Q13.43) MUTATED" 
                     TCGA-DB-5280                      TCGA-DB-5281 
"DEL PEAK 19(19Q13.43) WILD-TYPE" "DEL PEAK 19(19Q13.43) WILD-TYPE" 
                     TCGA-DH-5140                      TCGA-DH-5141 
  "DEL PEAK 19(19Q13.43) MUTATED"   "DEL PEAK 19(19Q13.43) MUTATED" 
                     TCGA-DH-5142                      TCGA-DH-5143 
  "DEL PEAK 19(19Q13.43) MUTATED" "DEL PEAK 19(19Q13.43) WILD-TYPE" 
                     TCGA-DH-5144                      TCGA-DU-5847 
  "DEL PEAK 19(19Q13.43) MUTATED" "DEL PEAK 19(19Q13.43) WILD-TYPE" 
                     TCGA-DU-5849                      TCGA-DU-5851 
  "DEL PEAK 19(19Q13.43) MUTATED"   "DEL PEAK 19(19Q13.43) MUTATED" 
                     TCGA-DU-5852                      TCGA-DU-5853 
"DEL PEAK 19(19Q13.43) WILD-TYPE" "DEL PEAK 19(19Q13.43) WILD-TYPE" 
                     TCGA-DU-5854                      TCGA-DU-5855 
"DEL PEAK 19(19Q13.43) WILD-TYPE"   "DEL PEAK 19(19Q13.43) MUTATED" 
                     TCGA-DU-5870                      TCGA-DU-5871 
  "DEL PEAK 19(19Q13.43) MUTATED" "DEL PEAK 19(19Q13.43) WILD-TYPE" 
                     TCGA-DU-5872                      TCGA-DU-5874 
  "DEL PEAK 19(19Q13.43) MUTATED"   "DEL PEAK 19(19Q13.43) MUTATED" 
                     TCGA-DU-6392                      TCGA-DU-6393 
"DEL PEAK 19(19Q13.43) WILD-TYPE"   "DEL PEAK 19(19Q13.43) MUTATED" 
                     TCGA-DU-6394                      TCGA-DU-6395 
  "DEL PEAK 19(19Q13.43) MUTATED" "DEL PEAK 19(19Q13.43) WILD-TYPE" 
                     TCGA-DU-6396                      TCGA-DU-6397 
  "DEL PEAK 19(19Q13.43) MUTATED"   "DEL PEAK 19(19Q13.43) MUTATED" 
                     TCGA-DU-6399                      TCGA-DU-6400 
  "DEL PEAK 19(19Q13.43) MUTATED"   "DEL PEAK 19(19Q13.43) MUTATED" 
                     TCGA-DU-6401                      TCGA-DU-6402 
"DEL PEAK 19(19Q13.43) WILD-TYPE" "DEL PEAK 19(19Q13.43) WILD-TYPE" 
                     TCGA-DU-6403                      TCGA-DU-6404 
"DEL PEAK 19(19Q13.43) WILD-TYPE" "DEL PEAK 19(19Q13.43) WILD-TYPE" 
                     TCGA-DU-6405                      TCGA-DU-6406 
"DEL PEAK 19(19Q13.43) WILD-TYPE" "DEL PEAK 19(19Q13.43) WILD-TYPE" 
                     TCGA-DU-6407                      TCGA-DU-6408 
"DEL PEAK 19(19Q13.43) WILD-TYPE"   "DEL PEAK 19(19Q13.43) MUTATED" 
                     TCGA-DU-6410                      TCGA-DU-6542 
  "DEL PEAK 19(19Q13.43) MUTATED"   "DEL PEAK 19(19Q13.43) MUTATED" 
                     TCGA-DU-7006                      TCGA-DU-7007 
"DEL PEAK 19(19Q13.43) WILD-TYPE"   "DEL PEAK 19(19Q13.43) MUTATED" 
                     TCGA-DU-7008                      TCGA-DU-7009 
"DEL PEAK 19(19Q13.43) WILD-TYPE"   "DEL PEAK 19(19Q13.43) MUTATED" 
                     TCGA-DU-7010                      TCGA-DU-7011 
  "DEL PEAK 19(19Q13.43) MUTATED" "DEL PEAK 19(19Q13.43) WILD-TYPE" 
                     TCGA-DU-7012                      TCGA-DU-7013 
  "DEL PEAK 19(19Q13.43) MUTATED" "DEL PEAK 19(19Q13.43) WILD-TYPE" 
                     TCGA-DU-7014                      TCGA-DU-7015 
  "DEL PEAK 19(19Q13.43) MUTATED"   "DEL PEAK 19(19Q13.43) MUTATED" 
                     TCGA-DU-7018                      TCGA-DU-7019 
  "DEL PEAK 19(19Q13.43) MUTATED" "DEL PEAK 19(19Q13.43) WILD-TYPE" 
                     TCGA-DU-7290                      TCGA-DU-7292 
"DEL PEAK 19(19Q13.43) WILD-TYPE" "DEL PEAK 19(19Q13.43) WILD-TYPE" 
                     TCGA-DU-7294                      TCGA-DU-7298 
  "DEL PEAK 19(19Q13.43) MUTATED"   "DEL PEAK 19(19Q13.43) MUTATED" 
                     TCGA-DU-7299                      TCGA-DU-7300 
"DEL PEAK 19(19Q13.43) WILD-TYPE"   "DEL PEAK 19(19Q13.43) MUTATED" 
                     TCGA-DU-7301                      TCGA-DU-7302 
"DEL PEAK 19(19Q13.43) WILD-TYPE"   "DEL PEAK 19(19Q13.43) MUTATED" 
                     TCGA-DU-7304                      TCGA-DU-7306 
"DEL PEAK 19(19Q13.43) WILD-TYPE"   "DEL PEAK 19(19Q13.43) MUTATED" 
                     TCGA-DU-7309                      TCGA-E1-5302 
  "DEL PEAK 19(19Q13.43) MUTATED"   "DEL PEAK 19(19Q13.43) MUTATED" 
                     TCGA-E1-5303                      TCGA-E1-5304 
"DEL PEAK 19(19Q13.43) WILD-TYPE"   "DEL PEAK 19(19Q13.43) MUTATED" 
                     TCGA-E1-5305                      TCGA-E1-5307 
  "DEL PEAK 19(19Q13.43) MUTATED" "DEL PEAK 19(19Q13.43) WILD-TYPE" 
                     TCGA-E1-5311                      TCGA-E1-5318 
  "DEL PEAK 19(19Q13.43) MUTATED"   "DEL PEAK 19(19Q13.43) MUTATED" 
                     TCGA-E1-5319                      TCGA-E1-5322 
  "DEL PEAK 19(19Q13.43) MUTATED"   "DEL PEAK 19(19Q13.43) MUTATED" 
                     TCGA-EZ-7264                      TCGA-FG-5962 
  "DEL PEAK 19(19Q13.43) MUTATED"   "DEL PEAK 19(19Q13.43) MUTATED" 
                     TCGA-FG-5963                      TCGA-FG-5964 
"DEL PEAK 19(19Q13.43) WILD-TYPE"   "DEL PEAK 19(19Q13.43) MUTATED" 
                     TCGA-FG-5965                      TCGA-FG-6688 
  "DEL PEAK 19(19Q13.43) MUTATED" "DEL PEAK 19(19Q13.43) WILD-TYPE" 
                     TCGA-FG-6689                      TCGA-FG-6690 
"DEL PEAK 19(19Q13.43) WILD-TYPE"   "DEL PEAK 19(19Q13.43) MUTATED" 
                     TCGA-FG-6691                      TCGA-FG-6692 
"DEL PEAK 19(19Q13.43) WILD-TYPE" "DEL PEAK 19(19Q13.43) WILD-TYPE" 
                     TCGA-FG-7634                      TCGA-FG-7636 
  "DEL PEAK 19(19Q13.43) MUTATED"   "DEL PEAK 19(19Q13.43) MUTATED" 
                     TCGA-FG-7638                      TCGA-FG-7643 
  "DEL PEAK 19(19Q13.43) MUTATED" "DEL PEAK 19(19Q13.43) WILD-TYPE" 
                     TCGA-FN-7833                      TCGA-HT-7467 
"DEL PEAK 19(19Q13.43) WILD-TYPE"   "DEL PEAK 19(19Q13.43) MUTATED" 
                     TCGA-HT-7468                      TCGA-HT-7470 
  "DEL PEAK 19(19Q13.43) MUTATED" "DEL PEAK 19(19Q13.43) WILD-TYPE" 
                     TCGA-HT-7472                      TCGA-HT-7473 
  "DEL PEAK 19(19Q13.43) MUTATED" "DEL PEAK 19(19Q13.43) WILD-TYPE" 
                     TCGA-HT-7474                      TCGA-HT-7475 
"DEL PEAK 19(19Q13.43) WILD-TYPE"   "DEL PEAK 19(19Q13.43) MUTATED" 
                     TCGA-HT-7476                      TCGA-HT-7478 
"DEL PEAK 19(19Q13.43) WILD-TYPE" "DEL PEAK 19(19Q13.43) WILD-TYPE" 
                     TCGA-HT-7479                      TCGA-HT-7480 
"DEL PEAK 19(19Q13.43) WILD-TYPE"   "DEL PEAK 19(19Q13.43) MUTATED" 
                     TCGA-HT-7481                      TCGA-HT-7482 
  "DEL PEAK 19(19Q13.43) MUTATED" "DEL PEAK 19(19Q13.43) WILD-TYPE" 
                     TCGA-HT-7483                      TCGA-HT-7485 
  "DEL PEAK 19(19Q13.43) MUTATED" "DEL PEAK 19(19Q13.43) WILD-TYPE" 
                     TCGA-HT-7601                      TCGA-HT-7602 
  "DEL PEAK 19(19Q13.43) MUTATED" "DEL PEAK 19(19Q13.43) WILD-TYPE" 
                     TCGA-HT-7603                      TCGA-HT-7604 
"DEL PEAK 19(19Q13.43) WILD-TYPE" "DEL PEAK 19(19Q13.43) WILD-TYPE" 
                     TCGA-HT-7605                      TCGA-HT-7606 
  "DEL PEAK 19(19Q13.43) MUTATED"   "DEL PEAK 19(19Q13.43) MUTATED" 
                     TCGA-HT-7607                      TCGA-HT-7608 
  "DEL PEAK 19(19Q13.43) MUTATED"   "DEL PEAK 19(19Q13.43) MUTATED" 
                     TCGA-HT-7609                      TCGA-HT-7610 
  "DEL PEAK 19(19Q13.43) MUTATED"   "DEL PEAK 19(19Q13.43) MUTATED" 
                     TCGA-HW-7486                      TCGA-HW-7487 
  "DEL PEAK 19(19Q13.43) MUTATED"   "DEL PEAK 19(19Q13.43) MUTATED" 
                     TCGA-HW-7489                      TCGA-HW-7490 
"DEL PEAK 19(19Q13.43) WILD-TYPE" "DEL PEAK 19(19Q13.43) WILD-TYPE" 
                     TCGA-HW-7491                      TCGA-HW-7493 
  "DEL PEAK 19(19Q13.43) MUTATED" "DEL PEAK 19(19Q13.43) WILD-TYPE" 
                     TCGA-HW-7495                      TCGA-IK-7675 
  "DEL PEAK 19(19Q13.43) MUTATED" "DEL PEAK 19(19Q13.43) WILD-TYPE" 
                     TCGA-IK-8125 
  "DEL PEAK 19(19Q13.43) MUTATED" 
                     TCGA-CS-4938                      TCGA-CS-4941 
"DEL PEAK 19(19Q13.43) WILD-TYPE" "DEL PEAK 19(19Q13.43) WILD-TYPE" 
                     TCGA-CS-4942                      TCGA-CS-4943 
  "DEL PEAK 19(19Q13.43) MUTATED"   "DEL PEAK 19(19Q13.43) MUTATED" 
                     TCGA-CS-4944                      TCGA-CS-5390 
  "DEL PEAK 19(19Q13.43) MUTATED"   "DEL PEAK 19(19Q13.43) MUTATED" 
                     TCGA-CS-5393                      TCGA-CS-5394 
"DEL PEAK 19(19Q13.43) WILD-TYPE"   "DEL PEAK 19(19Q13.43) MUTATED" 
                     TCGA-CS-5395                      TCGA-CS-5396 
"DEL PEAK 19(19Q13.43) WILD-TYPE"   "DEL PEAK 19(19Q13.43) MUTATED" 
                     TCGA-CS-5397                      TCGA-CS-6186 
"DEL PEAK 19(19Q13.43) WILD-TYPE" "DEL PEAK 19(19Q13.43) WILD-TYPE" 
                     TCGA-CS-6188                      TCGA-CS-6290 
"DEL PEAK 19(19Q13.43) WILD-TYPE"   "DEL PEAK 19(19Q13.43) MUTATED" 
                     TCGA-CS-6665                      TCGA-CS-6666 
"DEL PEAK 19(19Q13.43) WILD-TYPE"   "DEL PEAK 19(19Q13.43) MUTATED" 
                     TCGA-CS-6667                      TCGA-CS-6668 
"DEL PEAK 19(19Q13.43) WILD-TYPE"   "DEL PEAK 19(19Q13.43) MUTATED" 
                     TCGA-CS-6669                      TCGA-CS-6670 
"DEL PEAK 19(19Q13.43) WILD-TYPE"   "DEL PEAK 19(19Q13.43) MUTATED" 
                     TCGA-DB-5270                      TCGA-DB-5273 
  "DEL PEAK 19(19Q13.43) MUTATED"   "DEL PEAK 19(19Q13.43) MUTATED" 
                     TCGA-DB-5274                      TCGA-DB-5275 
  "DEL PEAK 19(19Q13.43) MUTATED"   "DEL PEAK 19(19Q13.43) MUTATED" 
                     TCGA-DB-5276                      TCGA-DB-5277 
"DEL PEAK 19(19Q13.43) WILD-TYPE"   "DEL PEAK 19(19Q13.43) MUTATED" 
                     TCGA-DB-5278                      TCGA-DB-5279 
  "DEL PEAK 19(19Q13.43) MUTATED"   "DEL PEAK 19(19Q13.43) MUTATED" 
                     TCGA-DB-5280                      TCGA-DB-5281 
"DEL PEAK 19(19Q13.43) WILD-TYPE" "DEL PEAK 19(19Q13.43) WILD-TYPE" 
                     TCGA-DH-5140                      TCGA-DH-5141 
  "DEL PEAK 19(19Q13.43) MUTATED"   "DEL PEAK 19(19Q13.43) MUTATED" 
                     TCGA-DH-5142                      TCGA-DH-5143 
  "DEL PEAK 19(19Q13.43) MUTATED" "DEL PEAK 19(19Q13.43) WILD-TYPE" 
                     TCGA-DH-5144                      TCGA-DU-5847 
  "DEL PEAK 19(19Q13.43) MUTATED" "DEL PEAK 19(19Q13.43) WILD-TYPE" 
                     TCGA-DU-5849                      TCGA-DU-5851 
  "DEL PEAK 19(19Q13.43) MUTATED"   "DEL PEAK 19(19Q13.43) MUTATED" 
                     TCGA-DU-5852                      TCGA-DU-5853 
"DEL PEAK 19(19Q13.43) WILD-TYPE" "DEL PEAK 19(19Q13.43) WILD-TYPE" 
                     TCGA-DU-5854                      TCGA-DU-5855 
"DEL PEAK 19(19Q13.43) WILD-TYPE"   "DEL PEAK 19(19Q13.43) MUTATED" 
                     TCGA-DU-5870                      TCGA-DU-5871 
  "DEL PEAK 19(19Q13.43) MUTATED" "DEL PEAK 19(19Q13.43) WILD-TYPE" 
                     TCGA-DU-5872                      TCGA-DU-5874 
  "DEL PEAK 19(19Q13.43) MUTATED"   "DEL PEAK 19(19Q13.43) MUTATED" 
                     TCGA-DU-6392                      TCGA-DU-6393 
"DEL PEAK 19(19Q13.43) WILD-TYPE"   "DEL PEAK 19(19Q13.43) MUTATED" 
                     TCGA-DU-6394                      TCGA-DU-6395 
  "DEL PEAK 19(19Q13.43) MUTATED" "DEL PEAK 19(19Q13.43) WILD-TYPE" 
                     TCGA-DU-6396                      TCGA-DU-6397 
  "DEL PEAK 19(19Q13.43) MUTATED"   "DEL PEAK 19(19Q13.43) MUTATED" 
                     TCGA-DU-6399                      TCGA-DU-6400 
  "DEL PEAK 19(19Q13.43) MUTATED"   "DEL PEAK 19(19Q13.43) MUTATED" 
                     TCGA-DU-6401                      TCGA-DU-6402 
"DEL PEAK 19(19Q13.43) WILD-TYPE" "DEL PEAK 19(19Q13.43) WILD-TYPE" 
                     TCGA-DU-6403                      TCGA-DU-6404 
"DEL PEAK 19(19Q13.43) WILD-TYPE" "DEL PEAK 19(19Q13.43) WILD-TYPE" 
                     TCGA-DU-6405                      TCGA-DU-6406 
"DEL PEAK 19(19Q13.43) WILD-TYPE" "DEL PEAK 19(19Q13.43) WILD-TYPE" 
                     TCGA-DU-6407                      TCGA-DU-6408 
"DEL PEAK 19(19Q13.43) WILD-TYPE"   "DEL PEAK 19(19Q13.43) MUTATED" 
                     TCGA-DU-6410                      TCGA-DU-6542 
  "DEL PEAK 19(19Q13.43) MUTATED"   "DEL PEAK 19(19Q13.43) MUTATED" 
                     TCGA-DU-7006                      TCGA-DU-7007 
"DEL PEAK 19(19Q13.43) WILD-TYPE"   "DEL PEAK 19(19Q13.43) MUTATED" 
                     TCGA-DU-7008                      TCGA-DU-7009 
"DEL PEAK 19(19Q13.43) WILD-TYPE"   "DEL PEAK 19(19Q13.43) MUTATED" 
                     TCGA-DU-7010                      TCGA-DU-7011 
  "DEL PEAK 19(19Q13.43) MUTATED" "DEL PEAK 19(19Q13.43) WILD-TYPE" 
                     TCGA-DU-7012                      TCGA-DU-7013 
  "DEL PEAK 19(19Q13.43) MUTATED" "DEL PEAK 19(19Q13.43) WILD-TYPE" 
                     TCGA-DU-7014                      TCGA-DU-7015 
  "DEL PEAK 19(19Q13.43) MUTATED"   "DEL PEAK 19(19Q13.43) MUTATED" 
                     TCGA-DU-7018                      TCGA-DU-7019 
  "DEL PEAK 19(19Q13.43) MUTATED" "DEL PEAK 19(19Q13.43) WILD-TYPE" 
                     TCGA-DU-7290                      TCGA-DU-7292 
"DEL PEAK 19(19Q13.43) WILD-TYPE" "DEL PEAK 19(19Q13.43) WILD-TYPE" 
                     TCGA-DU-7294                      TCGA-DU-7298 
  "DEL PEAK 19(19Q13.43) MUTATED"   "DEL PEAK 19(19Q13.43) MUTATED" 
                     TCGA-DU-7299                      TCGA-DU-7300 
"DEL PEAK 19(19Q13.43) WILD-TYPE"   "DEL PEAK 19(19Q13.43) MUTATED" 
                     TCGA-DU-7301                      TCGA-DU-7302 
"DEL PEAK 19(19Q13.43) WILD-TYPE"   "DEL PEAK 19(19Q13.43) MUTATED" 
                     TCGA-DU-7304                      TCGA-DU-7306 
"DEL PEAK 19(19Q13.43) WILD-TYPE"   "DEL PEAK 19(19Q13.43) MUTATED" 
                     TCGA-DU-7309                      TCGA-E1-5302 
  "DEL PEAK 19(19Q13.43) MUTATED"   "DEL PEAK 19(19Q13.43) MUTATED" 
                     TCGA-E1-5303                      TCGA-E1-5304 
"DEL PEAK 19(19Q13.43) WILD-TYPE"   "DEL PEAK 19(19Q13.43) MUTATED" 
                     TCGA-E1-5305                      TCGA-E1-5307 
  "DEL PEAK 19(19Q13.43) MUTATED" "DEL PEAK 19(19Q13.43) WILD-TYPE" 
                     TCGA-E1-5311                      TCGA-E1-5318 
  "DEL PEAK 19(19Q13.43) MUTATED"   "DEL PEAK 19(19Q13.43) MUTATED" 
                     TCGA-E1-5319                      TCGA-E1-5322 
  "DEL PEAK 19(19Q13.43) MUTATED"   "DEL PEAK 19(19Q13.43) MUTATED" 
                     TCGA-EZ-7264                      TCGA-FG-5962 
  "DEL PEAK 19(19Q13.43) MUTATED"   "DEL PEAK 19(19Q13.43) MUTATED" 
                     TCGA-FG-5963                      TCGA-FG-5964 
"DEL PEAK 19(19Q13.43) WILD-TYPE"   "DEL PEAK 19(19Q13.43) MUTATED" 
                     TCGA-FG-5965                      TCGA-FG-6688 
  "DEL PEAK 19(19Q13.43) MUTATED" "DEL PEAK 19(19Q13.43) WILD-TYPE" 
                     TCGA-FG-6689                      TCGA-FG-6690 
"DEL PEAK 19(19Q13.43) WILD-TYPE"   "DEL PEAK 19(19Q13.43) MUTATED" 
                     TCGA-FG-6691                      TCGA-FG-6692 
"DEL PEAK 19(19Q13.43) WILD-TYPE" "DEL PEAK 19(19Q13.43) WILD-TYPE" 
                     TCGA-FG-7634                      TCGA-FG-7636 
  "DEL PEAK 19(19Q13.43) MUTATED"   "DEL PEAK 19(19Q13.43) MUTATED" 
                     TCGA-FG-7638                      TCGA-FG-7643 
  "DEL PEAK 19(19Q13.43) MUTATED" "DEL PEAK 19(19Q13.43) WILD-TYPE" 
                     TCGA-FN-7833                      TCGA-HT-7467 
"DEL PEAK 19(19Q13.43) WILD-TYPE"   "DEL PEAK 19(19Q13.43) MUTATED" 
                     TCGA-HT-7468                      TCGA-HT-7470 
  "DEL PEAK 19(19Q13.43) MUTATED" "DEL PEAK 19(19Q13.43) WILD-TYPE" 
                     TCGA-HT-7472                      TCGA-HT-7473 
  "DEL PEAK 19(19Q13.43) MUTATED" "DEL PEAK 19(19Q13.43) WILD-TYPE" 
                     TCGA-HT-7474                      TCGA-HT-7475 
"DEL PEAK 19(19Q13.43) WILD-TYPE"   "DEL PEAK 19(19Q13.43) MUTATED" 
                     TCGA-HT-7476                      TCGA-HT-7478 
"DEL PEAK 19(19Q13.43) WILD-TYPE" "DEL PEAK 19(19Q13.43) WILD-TYPE" 
                     TCGA-HT-7479                      TCGA-HT-7480 
"DEL PEAK 19(19Q13.43) WILD-TYPE"   "DEL PEAK 19(19Q13.43) MUTATED" 
                     TCGA-HT-7481                      TCGA-HT-7482 
  "DEL PEAK 19(19Q13.43) MUTATED" "DEL PEAK 19(19Q13.43) WILD-TYPE" 
                     TCGA-HT-7483                      TCGA-HT-7485 
  "DEL PEAK 19(19Q13.43) MUTATED" "DEL PEAK 19(19Q13.43) WILD-TYPE" 
                     TCGA-HT-7601                      TCGA-HT-7602 
  "DEL PEAK 19(19Q13.43) MUTATED" "DEL PEAK 19(19Q13.43) WILD-TYPE" 
                     TCGA-HT-7603                      TCGA-HT-7604 
"DEL PEAK 19(19Q13.43) WILD-TYPE" "DEL PEAK 19(19Q13.43) WILD-TYPE" 
                     TCGA-HT-7605                      TCGA-HT-7606 
  "DEL PEAK 19(19Q13.43) MUTATED"   "DEL PEAK 19(19Q13.43) MUTATED" 
                     TCGA-HT-7607                      TCGA-HT-7608 
  "DEL PEAK 19(19Q13.43) MUTATED"   "DEL PEAK 19(19Q13.43) MUTATED" 
                     TCGA-HT-7609                      TCGA-HT-7610 
  "DEL PEAK 19(19Q13.43) MUTATED"   "DEL PEAK 19(19Q13.43) MUTATED" 
                     TCGA-HW-7486                      TCGA-HW-7487 
  "DEL PEAK 19(19Q13.43) MUTATED"   "DEL PEAK 19(19Q13.43) MUTATED" 
                     TCGA-HW-7489                      TCGA-HW-7490 
"DEL PEAK 19(19Q13.43) WILD-TYPE" "DEL PEAK 19(19Q13.43) WILD-TYPE" 
                     TCGA-HW-7491                      TCGA-HW-7493 
  "DEL PEAK 19(19Q13.43) MUTATED" "DEL PEAK 19(19Q13.43) WILD-TYPE" 
                     TCGA-HW-7495                      TCGA-IK-7675 
  "DEL PEAK 19(19Q13.43) MUTATED" "DEL PEAK 19(19Q13.43) WILD-TYPE" 
                     TCGA-IK-8125 
  "DEL PEAK 19(19Q13.43) MUTATED" 
[1] "hr=" "1.8"
D33V2, continuous
D33V3, binary
[1] "tbl2"
                                 cls
clus                              [,1] [,2]
  DEL PEAK 19(19Q13.43) MUTATED     37   46
  DEL PEAK 19(19Q13.43) WILD-TYPE   25   37
        clus
vv       DEL PEAK 19(19Q13.43) MUTATED DEL PEAK 19(19Q13.43) WILD-TYPE
  FEMALE                            37                              25
  MALE                              46                              37
D33V4, continuous
D33V5, multiclass
                   clus
vv                  DEL PEAK 19(19Q13.43) MUTATED
  ASTROCYTOMA                                  20
  OLIGOASTROCYTOMA                             17
  OLIGODENDROGLIOMA                            45
                   clus
vv                  DEL PEAK 19(19Q13.43) WILD-TYPE
  ASTROCYTOMA                                    30
  OLIGOASTROCYTOMA                               19
  OLIGODENDROGLIOMA                              13
D33V6, binary
[1] "tbl2"
                                 cls
clus                              [,1] [,2]
  DEL PEAK 19(19Q13.43) MUTATED     38   45
  DEL PEAK 19(19Q13.43) WILD-TYPE   21   41
     clus
vv    DEL PEAK 19(19Q13.43) MUTATED DEL PEAK 19(19Q13.43) WILD-TYPE
  NO                             45                              41
  YES                            38                              21
D33V7, binary
[1] "tbl2"
                                 cls
clus                              [,1] [,2]
  DEL PEAK 19(19Q13.43) MUTATED     39   44
  DEL PEAK 19(19Q13.43) WILD-TYPE   35   27
     clus
vv    DEL PEAK 19(19Q13.43) MUTATED DEL PEAK 19(19Q13.43) WILD-TYPE
  NO                             44                              27
  YES                            39                              35

Clustering(34) Variable = Del Peak 20(22q13.31) mutation analysis
D34V1, survival
                     TCGA-CS-4938                      TCGA-CS-4941 
"DEL PEAK 20(22Q13.31) WILD-TYPE" "DEL PEAK 20(22Q13.31) WILD-TYPE" 
                     TCGA-CS-4942                      TCGA-CS-4943 
"DEL PEAK 20(22Q13.31) WILD-TYPE"   "DEL PEAK 20(22Q13.31) MUTATED" 
                     TCGA-CS-4944                      TCGA-CS-5390 
"DEL PEAK 20(22Q13.31) WILD-TYPE" "DEL PEAK 20(22Q13.31) WILD-TYPE" 
                     TCGA-CS-5393                      TCGA-CS-5394 
  "DEL PEAK 20(22Q13.31) MUTATED" "DEL PEAK 20(22Q13.31) WILD-TYPE" 
                     TCGA-CS-5395                      TCGA-CS-5396 
"DEL PEAK 20(22Q13.31) WILD-TYPE" "DEL PEAK 20(22Q13.31) WILD-TYPE" 
                     TCGA-CS-5397                      TCGA-CS-6186 
  "DEL PEAK 20(22Q13.31) MUTATED"   "DEL PEAK 20(22Q13.31) MUTATED" 
                     TCGA-CS-6188                      TCGA-CS-6290 
"DEL PEAK 20(22Q13.31) WILD-TYPE" "DEL PEAK 20(22Q13.31) WILD-TYPE" 
                     TCGA-CS-6665                      TCGA-CS-6666 
"DEL PEAK 20(22Q13.31) WILD-TYPE" "DEL PEAK 20(22Q13.31) WILD-TYPE" 
                     TCGA-CS-6667                      TCGA-CS-6668 
"DEL PEAK 20(22Q13.31) WILD-TYPE" "DEL PEAK 20(22Q13.31) WILD-TYPE" 
                     TCGA-CS-6669                      TCGA-CS-6670 
"DEL PEAK 20(22Q13.31) WILD-TYPE" "DEL PEAK 20(22Q13.31) WILD-TYPE" 
                     TCGA-DB-5270                      TCGA-DB-5273 
"DEL PEAK 20(22Q13.31) WILD-TYPE"   "DEL PEAK 20(22Q13.31) MUTATED" 
                     TCGA-DB-5274                      TCGA-DB-5275 
"DEL PEAK 20(22Q13.31) WILD-TYPE" "DEL PEAK 20(22Q13.31) WILD-TYPE" 
                     TCGA-DB-5276                      TCGA-DB-5277 
"DEL PEAK 20(22Q13.31) WILD-TYPE"   "DEL PEAK 20(22Q13.31) MUTATED" 
                     TCGA-DB-5278                      TCGA-DB-5279 
"DEL PEAK 20(22Q13.31) WILD-TYPE" "DEL PEAK 20(22Q13.31) WILD-TYPE" 
                     TCGA-DB-5280                      TCGA-DB-5281 
"DEL PEAK 20(22Q13.31) WILD-TYPE" "DEL PEAK 20(22Q13.31) WILD-TYPE" 
                     TCGA-DH-5140                      TCGA-DH-5141 
"DEL PEAK 20(22Q13.31) WILD-TYPE" "DEL PEAK 20(22Q13.31) WILD-TYPE" 
                     TCGA-DH-5142                      TCGA-DH-5143 
"DEL PEAK 20(22Q13.31) WILD-TYPE" "DEL PEAK 20(22Q13.31) WILD-TYPE" 
                     TCGA-DH-5144                      TCGA-DU-5847 
"DEL PEAK 20(22Q13.31) WILD-TYPE"   "DEL PEAK 20(22Q13.31) MUTATED" 
                     TCGA-DU-5849                      TCGA-DU-5851 
"DEL PEAK 20(22Q13.31) WILD-TYPE" "DEL PEAK 20(22Q13.31) WILD-TYPE" 
                     TCGA-DU-5852                      TCGA-DU-5853 
  "DEL PEAK 20(22Q13.31) MUTATED"   "DEL PEAK 20(22Q13.31) MUTATED" 
                     TCGA-DU-5854                      TCGA-DU-5855 
"DEL PEAK 20(22Q13.31) WILD-TYPE" "DEL PEAK 20(22Q13.31) WILD-TYPE" 
                     TCGA-DU-5870                      TCGA-DU-5871 
"DEL PEAK 20(22Q13.31) WILD-TYPE" "DEL PEAK 20(22Q13.31) WILD-TYPE" 
                     TCGA-DU-5872                      TCGA-DU-5874 
"DEL PEAK 20(22Q13.31) WILD-TYPE" "DEL PEAK 20(22Q13.31) WILD-TYPE" 
                     TCGA-DU-6392                      TCGA-DU-6393 
"DEL PEAK 20(22Q13.31) WILD-TYPE" "DEL PEAK 20(22Q13.31) WILD-TYPE" 
                     TCGA-DU-6394                      TCGA-DU-6395 
"DEL PEAK 20(22Q13.31) WILD-TYPE" "DEL PEAK 20(22Q13.31) WILD-TYPE" 
                     TCGA-DU-6396                      TCGA-DU-6397 
"DEL PEAK 20(22Q13.31) WILD-TYPE" "DEL PEAK 20(22Q13.31) WILD-TYPE" 
                     TCGA-DU-6399                      TCGA-DU-6400 
  "DEL PEAK 20(22Q13.31) MUTATED" "DEL PEAK 20(22Q13.31) WILD-TYPE" 
                     TCGA-DU-6401                      TCGA-DU-6402 
"DEL PEAK 20(22Q13.31) WILD-TYPE" "DEL PEAK 20(22Q13.31) WILD-TYPE" 
                     TCGA-DU-6403                      TCGA-DU-6404 
"DEL PEAK 20(22Q13.31) WILD-TYPE"   "DEL PEAK 20(22Q13.31) MUTATED" 
                     TCGA-DU-6405                      TCGA-DU-6406 
"DEL PEAK 20(22Q13.31) WILD-TYPE" "DEL PEAK 20(22Q13.31) WILD-TYPE" 
                     TCGA-DU-6407                      TCGA-DU-6408 
"DEL PEAK 20(22Q13.31) WILD-TYPE" "DEL PEAK 20(22Q13.31) WILD-TYPE" 
                     TCGA-DU-6410                      TCGA-DU-6542 
"DEL PEAK 20(22Q13.31) WILD-TYPE" "DEL PEAK 20(22Q13.31) WILD-TYPE" 
                     TCGA-DU-7006                      TCGA-DU-7007 
"DEL PEAK 20(22Q13.31) WILD-TYPE"   "DEL PEAK 20(22Q13.31) MUTATED" 
                     TCGA-DU-7008                      TCGA-DU-7009 
  "DEL PEAK 20(22Q13.31) MUTATED" "DEL PEAK 20(22Q13.31) WILD-TYPE" 
                     TCGA-DU-7010                      TCGA-DU-7011 
  "DEL PEAK 20(22Q13.31) MUTATED" "DEL PEAK 20(22Q13.31) WILD-TYPE" 
                     TCGA-DU-7012                      TCGA-DU-7013 
"DEL PEAK 20(22Q13.31) WILD-TYPE" "DEL PEAK 20(22Q13.31) WILD-TYPE" 
                     TCGA-DU-7014                      TCGA-DU-7015 
"DEL PEAK 20(22Q13.31) WILD-TYPE" "DEL PEAK 20(22Q13.31) WILD-TYPE" 
                     TCGA-DU-7018                      TCGA-DU-7019 
"DEL PEAK 20(22Q13.31) WILD-TYPE" "DEL PEAK 20(22Q13.31) WILD-TYPE" 
                     TCGA-DU-7290                      TCGA-DU-7292 
  "DEL PEAK 20(22Q13.31) MUTATED" "DEL PEAK 20(22Q13.31) WILD-TYPE" 
                     TCGA-DU-7294                      TCGA-DU-7298 
"DEL PEAK 20(22Q13.31) WILD-TYPE"   "DEL PEAK 20(22Q13.31) MUTATED" 
                     TCGA-DU-7299                      TCGA-DU-7300 
"DEL PEAK 20(22Q13.31) WILD-TYPE" "DEL PEAK 20(22Q13.31) WILD-TYPE" 
                     TCGA-DU-7301                      TCGA-DU-7302 
"DEL PEAK 20(22Q13.31) WILD-TYPE" "DEL PEAK 20(22Q13.31) WILD-TYPE" 
                     TCGA-DU-7304                      TCGA-DU-7306 
"DEL PEAK 20(22Q13.31) WILD-TYPE"   "DEL PEAK 20(22Q13.31) MUTATED" 
                     TCGA-DU-7309                      TCGA-E1-5302 
"DEL PEAK 20(22Q13.31) WILD-TYPE" "DEL PEAK 20(22Q13.31) WILD-TYPE" 
                     TCGA-E1-5303                      TCGA-E1-5304 
  "DEL PEAK 20(22Q13.31) MUTATED"   "DEL PEAK 20(22Q13.31) MUTATED" 
                     TCGA-E1-5305                      TCGA-E1-5307 
"DEL PEAK 20(22Q13.31) WILD-TYPE" "DEL PEAK 20(22Q13.31) WILD-TYPE" 
                     TCGA-E1-5311                      TCGA-E1-5318 
"DEL PEAK 20(22Q13.31) WILD-TYPE" "DEL PEAK 20(22Q13.31) WILD-TYPE" 
                     TCGA-E1-5319                      TCGA-E1-5322 
"DEL PEAK 20(22Q13.31) WILD-TYPE"   "DEL PEAK 20(22Q13.31) MUTATED" 
                     TCGA-EZ-7264                      TCGA-FG-5962 
"DEL PEAK 20(22Q13.31) WILD-TYPE" "DEL PEAK 20(22Q13.31) WILD-TYPE" 
                     TCGA-FG-5963                      TCGA-FG-5964 
"DEL PEAK 20(22Q13.31) WILD-TYPE" "DEL PEAK 20(22Q13.31) WILD-TYPE" 
                     TCGA-FG-5965                      TCGA-FG-6688 
"DEL PEAK 20(22Q13.31) WILD-TYPE" "DEL PEAK 20(22Q13.31) WILD-TYPE" 
                     TCGA-FG-6689                      TCGA-FG-6690 
"DEL PEAK 20(22Q13.31) WILD-TYPE" "DEL PEAK 20(22Q13.31) WILD-TYPE" 
                     TCGA-FG-6691                      TCGA-FG-6692 
"DEL PEAK 20(22Q13.31) WILD-TYPE" "DEL PEAK 20(22Q13.31) WILD-TYPE" 
                     TCGA-FG-7634                      TCGA-FG-7636 
"DEL PEAK 20(22Q13.31) WILD-TYPE" "DEL PEAK 20(22Q13.31) WILD-TYPE" 
                     TCGA-FG-7638                      TCGA-FG-7643 
"DEL PEAK 20(22Q13.31) WILD-TYPE"   "DEL PEAK 20(22Q13.31) MUTATED" 
                     TCGA-FN-7833                      TCGA-HT-7467 
"DEL PEAK 20(22Q13.31) WILD-TYPE" "DEL PEAK 20(22Q13.31) WILD-TYPE" 
                     TCGA-HT-7468                      TCGA-HT-7470 
"DEL PEAK 20(22Q13.31) WILD-TYPE" "DEL PEAK 20(22Q13.31) WILD-TYPE" 
                     TCGA-HT-7472                      TCGA-HT-7473 
"DEL PEAK 20(22Q13.31) WILD-TYPE" "DEL PEAK 20(22Q13.31) WILD-TYPE" 
                     TCGA-HT-7474                      TCGA-HT-7475 
"DEL PEAK 20(22Q13.31) WILD-TYPE" "DEL PEAK 20(22Q13.31) WILD-TYPE" 
                     TCGA-HT-7476                      TCGA-HT-7478 
"DEL PEAK 20(22Q13.31) WILD-TYPE" "DEL PEAK 20(22Q13.31) WILD-TYPE" 
                     TCGA-HT-7479                      TCGA-HT-7480 
"DEL PEAK 20(22Q13.31) WILD-TYPE" "DEL PEAK 20(22Q13.31) WILD-TYPE" 
                     TCGA-HT-7481                      TCGA-HT-7482 
"DEL PEAK 20(22Q13.31) WILD-TYPE" "DEL PEAK 20(22Q13.31) WILD-TYPE" 
                     TCGA-HT-7483                      TCGA-HT-7485 
"DEL PEAK 20(22Q13.31) WILD-TYPE" "DEL PEAK 20(22Q13.31) WILD-TYPE" 
                     TCGA-HT-7601                      TCGA-HT-7602 
"DEL PEAK 20(22Q13.31) WILD-TYPE" "DEL PEAK 20(22Q13.31) WILD-TYPE" 
                     TCGA-HT-7603                      TCGA-HT-7604 
"DEL PEAK 20(22Q13.31) WILD-TYPE" "DEL PEAK 20(22Q13.31) WILD-TYPE" 
                     TCGA-HT-7605                      TCGA-HT-7606 
"DEL PEAK 20(22Q13.31) WILD-TYPE" "DEL PEAK 20(22Q13.31) WILD-TYPE" 
                     TCGA-HT-7607                      TCGA-HT-7608 
"DEL PEAK 20(22Q13.31) WILD-TYPE" "DEL PEAK 20(22Q13.31) WILD-TYPE" 
                     TCGA-HT-7609                      TCGA-HT-7610 
"DEL PEAK 20(22Q13.31) WILD-TYPE" "DEL PEAK 20(22Q13.31) WILD-TYPE" 
                     TCGA-HW-7486                      TCGA-HW-7487 
"DEL PEAK 20(22Q13.31) WILD-TYPE" "DEL PEAK 20(22Q13.31) WILD-TYPE" 
                     TCGA-HW-7489                      TCGA-HW-7490 
"DEL PEAK 20(22Q13.31) WILD-TYPE" "DEL PEAK 20(22Q13.31) WILD-TYPE" 
                     TCGA-HW-7491                      TCGA-HW-7493 
"DEL PEAK 20(22Q13.31) WILD-TYPE" "DEL PEAK 20(22Q13.31) WILD-TYPE" 
                     TCGA-HW-7495                      TCGA-IK-7675 
"DEL PEAK 20(22Q13.31) WILD-TYPE" "DEL PEAK 20(22Q13.31) WILD-TYPE" 
                     TCGA-IK-8125 
"DEL PEAK 20(22Q13.31) WILD-TYPE" 
                     TCGA-CS-4938                      TCGA-CS-4941 
"DEL PEAK 20(22Q13.31) WILD-TYPE" "DEL PEAK 20(22Q13.31) WILD-TYPE" 
                     TCGA-CS-4942                      TCGA-CS-4943 
"DEL PEAK 20(22Q13.31) WILD-TYPE"   "DEL PEAK 20(22Q13.31) MUTATED" 
                     TCGA-CS-4944                      TCGA-CS-5390 
"DEL PEAK 20(22Q13.31) WILD-TYPE" "DEL PEAK 20(22Q13.31) WILD-TYPE" 
                     TCGA-CS-5393                      TCGA-CS-5394 
  "DEL PEAK 20(22Q13.31) MUTATED" "DEL PEAK 20(22Q13.31) WILD-TYPE" 
                     TCGA-CS-5395                      TCGA-CS-5396 
"DEL PEAK 20(22Q13.31) WILD-TYPE" "DEL PEAK 20(22Q13.31) WILD-TYPE" 
                     TCGA-CS-5397                      TCGA-CS-6186 
  "DEL PEAK 20(22Q13.31) MUTATED"   "DEL PEAK 20(22Q13.31) MUTATED" 
                     TCGA-CS-6188                      TCGA-CS-6290 
"DEL PEAK 20(22Q13.31) WILD-TYPE" "DEL PEAK 20(22Q13.31) WILD-TYPE" 
                     TCGA-CS-6665                      TCGA-CS-6666 
"DEL PEAK 20(22Q13.31) WILD-TYPE" "DEL PEAK 20(22Q13.31) WILD-TYPE" 
                     TCGA-CS-6667                      TCGA-CS-6668 
"DEL PEAK 20(22Q13.31) WILD-TYPE" "DEL PEAK 20(22Q13.31) WILD-TYPE" 
                     TCGA-CS-6669                      TCGA-CS-6670 
"DEL PEAK 20(22Q13.31) WILD-TYPE" "DEL PEAK 20(22Q13.31) WILD-TYPE" 
                     TCGA-DB-5270                      TCGA-DB-5273 
"DEL PEAK 20(22Q13.31) WILD-TYPE"   "DEL PEAK 20(22Q13.31) MUTATED" 
                     TCGA-DB-5274                      TCGA-DB-5275 
"DEL PEAK 20(22Q13.31) WILD-TYPE" "DEL PEAK 20(22Q13.31) WILD-TYPE" 
                     TCGA-DB-5276                      TCGA-DB-5277 
"DEL PEAK 20(22Q13.31) WILD-TYPE"   "DEL PEAK 20(22Q13.31) MUTATED" 
                     TCGA-DB-5278                      TCGA-DB-5279 
"DEL PEAK 20(22Q13.31) WILD-TYPE" "DEL PEAK 20(22Q13.31) WILD-TYPE" 
                     TCGA-DB-5280                      TCGA-DB-5281 
"DEL PEAK 20(22Q13.31) WILD-TYPE" "DEL PEAK 20(22Q13.31) WILD-TYPE" 
                     TCGA-DH-5140                      TCGA-DH-5141 
"DEL PEAK 20(22Q13.31) WILD-TYPE" "DEL PEAK 20(22Q13.31) WILD-TYPE" 
                     TCGA-DH-5142                      TCGA-DH-5143 
"DEL PEAK 20(22Q13.31) WILD-TYPE" "DEL PEAK 20(22Q13.31) WILD-TYPE" 
                     TCGA-DH-5144                      TCGA-DU-5847 
"DEL PEAK 20(22Q13.31) WILD-TYPE"   "DEL PEAK 20(22Q13.31) MUTATED" 
                     TCGA-DU-5849                      TCGA-DU-5851 
"DEL PEAK 20(22Q13.31) WILD-TYPE" "DEL PEAK 20(22Q13.31) WILD-TYPE" 
                     TCGA-DU-5852                      TCGA-DU-5853 
  "DEL PEAK 20(22Q13.31) MUTATED"   "DEL PEAK 20(22Q13.31) MUTATED" 
                     TCGA-DU-5854                      TCGA-DU-5855 
"DEL PEAK 20(22Q13.31) WILD-TYPE" "DEL PEAK 20(22Q13.31) WILD-TYPE" 
                     TCGA-DU-5870                      TCGA-DU-5871 
"DEL PEAK 20(22Q13.31) WILD-TYPE" "DEL PEAK 20(22Q13.31) WILD-TYPE" 
                     TCGA-DU-5872                      TCGA-DU-5874 
"DEL PEAK 20(22Q13.31) WILD-TYPE" "DEL PEAK 20(22Q13.31) WILD-TYPE" 
                     TCGA-DU-6392                      TCGA-DU-6393 
"DEL PEAK 20(22Q13.31) WILD-TYPE" "DEL PEAK 20(22Q13.31) WILD-TYPE" 
                     TCGA-DU-6394                      TCGA-DU-6395 
"DEL PEAK 20(22Q13.31) WILD-TYPE" "DEL PEAK 20(22Q13.31) WILD-TYPE" 
                     TCGA-DU-6396                      TCGA-DU-6397 
"DEL PEAK 20(22Q13.31) WILD-TYPE" "DEL PEAK 20(22Q13.31) WILD-TYPE" 
                     TCGA-DU-6399                      TCGA-DU-6400 
  "DEL PEAK 20(22Q13.31) MUTATED" "DEL PEAK 20(22Q13.31) WILD-TYPE" 
                     TCGA-DU-6401                      TCGA-DU-6402 
"DEL PEAK 20(22Q13.31) WILD-TYPE" "DEL PEAK 20(22Q13.31) WILD-TYPE" 
                     TCGA-DU-6403                      TCGA-DU-6404 
"DEL PEAK 20(22Q13.31) WILD-TYPE"   "DEL PEAK 20(22Q13.31) MUTATED" 
                     TCGA-DU-6405                      TCGA-DU-6406 
"DEL PEAK 20(22Q13.31) WILD-TYPE" "DEL PEAK 20(22Q13.31) WILD-TYPE" 
                     TCGA-DU-6407                      TCGA-DU-6408 
"DEL PEAK 20(22Q13.31) WILD-TYPE" "DEL PEAK 20(22Q13.31) WILD-TYPE" 
                     TCGA-DU-6410                      TCGA-DU-6542 
"DEL PEAK 20(22Q13.31) WILD-TYPE" "DEL PEAK 20(22Q13.31) WILD-TYPE" 
                     TCGA-DU-7006                      TCGA-DU-7007 
"DEL PEAK 20(22Q13.31) WILD-TYPE"   "DEL PEAK 20(22Q13.31) MUTATED" 
                     TCGA-DU-7008                      TCGA-DU-7009 
  "DEL PEAK 20(22Q13.31) MUTATED" "DEL PEAK 20(22Q13.31) WILD-TYPE" 
                     TCGA-DU-7010                      TCGA-DU-7011 
  "DEL PEAK 20(22Q13.31) MUTATED" "DEL PEAK 20(22Q13.31) WILD-TYPE" 
                     TCGA-DU-7012                      TCGA-DU-7013 
"DEL PEAK 20(22Q13.31) WILD-TYPE" "DEL PEAK 20(22Q13.31) WILD-TYPE" 
                     TCGA-DU-7014                      TCGA-DU-7015 
"DEL PEAK 20(22Q13.31) WILD-TYPE" "DEL PEAK 20(22Q13.31) WILD-TYPE" 
                     TCGA-DU-7018                      TCGA-DU-7019 
"DEL PEAK 20(22Q13.31) WILD-TYPE" "DEL PEAK 20(22Q13.31) WILD-TYPE" 
                     TCGA-DU-7290                      TCGA-DU-7292 
  "DEL PEAK 20(22Q13.31) MUTATED" "DEL PEAK 20(22Q13.31) WILD-TYPE" 
                     TCGA-DU-7294                      TCGA-DU-7298 
"DEL PEAK 20(22Q13.31) WILD-TYPE"   "DEL PEAK 20(22Q13.31) MUTATED" 
                     TCGA-DU-7299                      TCGA-DU-7300 
"DEL PEAK 20(22Q13.31) WILD-TYPE" "DEL PEAK 20(22Q13.31) WILD-TYPE" 
                     TCGA-DU-7301                      TCGA-DU-7302 
"DEL PEAK 20(22Q13.31) WILD-TYPE" "DEL PEAK 20(22Q13.31) WILD-TYPE" 
                     TCGA-DU-7304                      TCGA-DU-7306 
"DEL PEAK 20(22Q13.31) WILD-TYPE"   "DEL PEAK 20(22Q13.31) MUTATED" 
                     TCGA-DU-7309                      TCGA-E1-5302 
"DEL PEAK 20(22Q13.31) WILD-TYPE" "DEL PEAK 20(22Q13.31) WILD-TYPE" 
                     TCGA-E1-5303                      TCGA-E1-5304 
  "DEL PEAK 20(22Q13.31) MUTATED"   "DEL PEAK 20(22Q13.31) MUTATED" 
                     TCGA-E1-5305                      TCGA-E1-5307 
"DEL PEAK 20(22Q13.31) WILD-TYPE" "DEL PEAK 20(22Q13.31) WILD-TYPE" 
                     TCGA-E1-5311                      TCGA-E1-5318 
"DEL PEAK 20(22Q13.31) WILD-TYPE" "DEL PEAK 20(22Q13.31) WILD-TYPE" 
                     TCGA-E1-5319                      TCGA-E1-5322 
"DEL PEAK 20(22Q13.31) WILD-TYPE"   "DEL PEAK 20(22Q13.31) MUTATED" 
                     TCGA-EZ-7264                      TCGA-FG-5962 
"DEL PEAK 20(22Q13.31) WILD-TYPE" "DEL PEAK 20(22Q13.31) WILD-TYPE" 
                     TCGA-FG-5963                      TCGA-FG-5964 
"DEL PEAK 20(22Q13.31) WILD-TYPE" "DEL PEAK 20(22Q13.31) WILD-TYPE" 
                     TCGA-FG-5965                      TCGA-FG-6688 
"DEL PEAK 20(22Q13.31) WILD-TYPE" "DEL PEAK 20(22Q13.31) WILD-TYPE" 
                     TCGA-FG-6689                      TCGA-FG-6690 
"DEL PEAK 20(22Q13.31) WILD-TYPE" "DEL PEAK 20(22Q13.31) WILD-TYPE" 
                     TCGA-FG-6691                      TCGA-FG-6692 
"DEL PEAK 20(22Q13.31) WILD-TYPE" "DEL PEAK 20(22Q13.31) WILD-TYPE" 
                     TCGA-FG-7634                      TCGA-FG-7636 
"DEL PEAK 20(22Q13.31) WILD-TYPE" "DEL PEAK 20(22Q13.31) WILD-TYPE" 
                     TCGA-FG-7638                      TCGA-FG-7643 
"DEL PEAK 20(22Q13.31) WILD-TYPE"   "DEL PEAK 20(22Q13.31) MUTATED" 
                     TCGA-FN-7833                      TCGA-HT-7467 
"DEL PEAK 20(22Q13.31) WILD-TYPE" "DEL PEAK 20(22Q13.31) WILD-TYPE" 
                     TCGA-HT-7468                      TCGA-HT-7470 
"DEL PEAK 20(22Q13.31) WILD-TYPE" "DEL PEAK 20(22Q13.31) WILD-TYPE" 
                     TCGA-HT-7472                      TCGA-HT-7473 
"DEL PEAK 20(22Q13.31) WILD-TYPE" "DEL PEAK 20(22Q13.31) WILD-TYPE" 
                     TCGA-HT-7474                      TCGA-HT-7475 
"DEL PEAK 20(22Q13.31) WILD-TYPE" "DEL PEAK 20(22Q13.31) WILD-TYPE" 
                     TCGA-HT-7476                      TCGA-HT-7478 
"DEL PEAK 20(22Q13.31) WILD-TYPE" "DEL PEAK 20(22Q13.31) WILD-TYPE" 
                     TCGA-HT-7479                      TCGA-HT-7480 
"DEL PEAK 20(22Q13.31) WILD-TYPE" "DEL PEAK 20(22Q13.31) WILD-TYPE" 
                     TCGA-HT-7481                      TCGA-HT-7482 
"DEL PEAK 20(22Q13.31) WILD-TYPE" "DEL PEAK 20(22Q13.31) WILD-TYPE" 
                     TCGA-HT-7483                      TCGA-HT-7485 
"DEL PEAK 20(22Q13.31) WILD-TYPE" "DEL PEAK 20(22Q13.31) WILD-TYPE" 
                     TCGA-HT-7601                      TCGA-HT-7602 
"DEL PEAK 20(22Q13.31) WILD-TYPE" "DEL PEAK 20(22Q13.31) WILD-TYPE" 
                     TCGA-HT-7603                      TCGA-HT-7604 
"DEL PEAK 20(22Q13.31) WILD-TYPE" "DEL PEAK 20(22Q13.31) WILD-TYPE" 
                     TCGA-HT-7605                      TCGA-HT-7606 
"DEL PEAK 20(22Q13.31) WILD-TYPE" "DEL PEAK 20(22Q13.31) WILD-TYPE" 
                     TCGA-HT-7607                      TCGA-HT-7608 
"DEL PEAK 20(22Q13.31) WILD-TYPE" "DEL PEAK 20(22Q13.31) WILD-TYPE" 
                     TCGA-HT-7609                      TCGA-HT-7610 
"DEL PEAK 20(22Q13.31) WILD-TYPE" "DEL PEAK 20(22Q13.31) WILD-TYPE" 
                     TCGA-HW-7486                      TCGA-HW-7487 
"DEL PEAK 20(22Q13.31) WILD-TYPE" "DEL PEAK 20(22Q13.31) WILD-TYPE" 
                     TCGA-HW-7489                      TCGA-HW-7490 
"DEL PEAK 20(22Q13.31) WILD-TYPE" "DEL PEAK 20(22Q13.31) WILD-TYPE" 
                     TCGA-HW-7491                      TCGA-HW-7493 
"DEL PEAK 20(22Q13.31) WILD-TYPE" "DEL PEAK 20(22Q13.31) WILD-TYPE" 
                     TCGA-HW-7495                      TCGA-IK-7675 
"DEL PEAK 20(22Q13.31) WILD-TYPE" "DEL PEAK 20(22Q13.31) WILD-TYPE" 
                     TCGA-IK-8125 
"DEL PEAK 20(22Q13.31) WILD-TYPE" 
                     TCGA-CS-4938                      TCGA-CS-4941 
"DEL PEAK 20(22Q13.31) WILD-TYPE" "DEL PEAK 20(22Q13.31) WILD-TYPE" 
                     TCGA-CS-4942                      TCGA-CS-4943 
"DEL PEAK 20(22Q13.31) WILD-TYPE"   "DEL PEAK 20(22Q13.31) MUTATED" 
                     TCGA-CS-4944                      TCGA-CS-5390 
"DEL PEAK 20(22Q13.31) WILD-TYPE" "DEL PEAK 20(22Q13.31) WILD-TYPE" 
                     TCGA-CS-5393                      TCGA-CS-5394 
  "DEL PEAK 20(22Q13.31) MUTATED" "DEL PEAK 20(22Q13.31) WILD-TYPE" 
                     TCGA-CS-5395                      TCGA-CS-5396 
"DEL PEAK 20(22Q13.31) WILD-TYPE" "DEL PEAK 20(22Q13.31) WILD-TYPE" 
                     TCGA-CS-5397                      TCGA-CS-6186 
  "DEL PEAK 20(22Q13.31) MUTATED"   "DEL PEAK 20(22Q13.31) MUTATED" 
                     TCGA-CS-6188                      TCGA-CS-6290 
"DEL PEAK 20(22Q13.31) WILD-TYPE" "DEL PEAK 20(22Q13.31) WILD-TYPE" 
                     TCGA-CS-6665                      TCGA-CS-6666 
"DEL PEAK 20(22Q13.31) WILD-TYPE" "DEL PEAK 20(22Q13.31) WILD-TYPE" 
                     TCGA-CS-6667                      TCGA-CS-6668 
"DEL PEAK 20(22Q13.31) WILD-TYPE" "DEL PEAK 20(22Q13.31) WILD-TYPE" 
                     TCGA-CS-6669                      TCGA-CS-6670 
"DEL PEAK 20(22Q13.31) WILD-TYPE" "DEL PEAK 20(22Q13.31) WILD-TYPE" 
                     TCGA-DB-5270                      TCGA-DB-5273 
"DEL PEAK 20(22Q13.31) WILD-TYPE"   "DEL PEAK 20(22Q13.31) MUTATED" 
                     TCGA-DB-5274                      TCGA-DB-5275 
"DEL PEAK 20(22Q13.31) WILD-TYPE" "DEL PEAK 20(22Q13.31) WILD-TYPE" 
                     TCGA-DB-5276                      TCGA-DB-5277 
"DEL PEAK 20(22Q13.31) WILD-TYPE"   "DEL PEAK 20(22Q13.31) MUTATED" 
                     TCGA-DB-5278                      TCGA-DB-5279 
"DEL PEAK 20(22Q13.31) WILD-TYPE" "DEL PEAK 20(22Q13.31) WILD-TYPE" 
                     TCGA-DB-5280                      TCGA-DB-5281 
"DEL PEAK 20(22Q13.31) WILD-TYPE" "DEL PEAK 20(22Q13.31) WILD-TYPE" 
                     TCGA-DH-5140                      TCGA-DH-5141 
"DEL PEAK 20(22Q13.31) WILD-TYPE" "DEL PEAK 20(22Q13.31) WILD-TYPE" 
                     TCGA-DH-5142                      TCGA-DH-5143 
"DEL PEAK 20(22Q13.31) WILD-TYPE" "DEL PEAK 20(22Q13.31) WILD-TYPE" 
                     TCGA-DH-5144                      TCGA-DU-5847 
"DEL PEAK 20(22Q13.31) WILD-TYPE"   "DEL PEAK 20(22Q13.31) MUTATED" 
                     TCGA-DU-5849                      TCGA-DU-5851 
"DEL PEAK 20(22Q13.31) WILD-TYPE" "DEL PEAK 20(22Q13.31) WILD-TYPE" 
                     TCGA-DU-5852                      TCGA-DU-5853 
  "DEL PEAK 20(22Q13.31) MUTATED"   "DEL PEAK 20(22Q13.31) MUTATED" 
                     TCGA-DU-5854                      TCGA-DU-5855 
"DEL PEAK 20(22Q13.31) WILD-TYPE" "DEL PEAK 20(22Q13.31) WILD-TYPE" 
                     TCGA-DU-5870                      TCGA-DU-5871 
"DEL PEAK 20(22Q13.31) WILD-TYPE" "DEL PEAK 20(22Q13.31) WILD-TYPE" 
                     TCGA-DU-5872                      TCGA-DU-5874 
"DEL PEAK 20(22Q13.31) WILD-TYPE" "DEL PEAK 20(22Q13.31) WILD-TYPE" 
                     TCGA-DU-6392                      TCGA-DU-6393 
"DEL PEAK 20(22Q13.31) WILD-TYPE" "DEL PEAK 20(22Q13.31) WILD-TYPE" 
                     TCGA-DU-6394                      TCGA-DU-6395 
"DEL PEAK 20(22Q13.31) WILD-TYPE" "DEL PEAK 20(22Q13.31) WILD-TYPE" 
                     TCGA-DU-6396                      TCGA-DU-6397 
"DEL PEAK 20(22Q13.31) WILD-TYPE" "DEL PEAK 20(22Q13.31) WILD-TYPE" 
                     TCGA-DU-6399                      TCGA-DU-6400 
  "DEL PEAK 20(22Q13.31) MUTATED" "DEL PEAK 20(22Q13.31) WILD-TYPE" 
                     TCGA-DU-6401                      TCGA-DU-6402 
"DEL PEAK 20(22Q13.31) WILD-TYPE" "DEL PEAK 20(22Q13.31) WILD-TYPE" 
                     TCGA-DU-6403                      TCGA-DU-6404 
"DEL PEAK 20(22Q13.31) WILD-TYPE"   "DEL PEAK 20(22Q13.31) MUTATED" 
                     TCGA-DU-6405                      TCGA-DU-6406 
"DEL PEAK 20(22Q13.31) WILD-TYPE" "DEL PEAK 20(22Q13.31) WILD-TYPE" 
                     TCGA-DU-6407                      TCGA-DU-6408 
"DEL PEAK 20(22Q13.31) WILD-TYPE" "DEL PEAK 20(22Q13.31) WILD-TYPE" 
                     TCGA-DU-6410                      TCGA-DU-6542 
"DEL PEAK 20(22Q13.31) WILD-TYPE" "DEL PEAK 20(22Q13.31) WILD-TYPE" 
                     TCGA-DU-7006                      TCGA-DU-7007 
"DEL PEAK 20(22Q13.31) WILD-TYPE"   "DEL PEAK 20(22Q13.31) MUTATED" 
                     TCGA-DU-7008                      TCGA-DU-7009 
  "DEL PEAK 20(22Q13.31) MUTATED" "DEL PEAK 20(22Q13.31) WILD-TYPE" 
                     TCGA-DU-7010                      TCGA-DU-7011 
  "DEL PEAK 20(22Q13.31) MUTATED" "DEL PEAK 20(22Q13.31) WILD-TYPE" 
                     TCGA-DU-7012                      TCGA-DU-7013 
"DEL PEAK 20(22Q13.31) WILD-TYPE" "DEL PEAK 20(22Q13.31) WILD-TYPE" 
                     TCGA-DU-7014                      TCGA-DU-7015 
"DEL PEAK 20(22Q13.31) WILD-TYPE" "DEL PEAK 20(22Q13.31) WILD-TYPE" 
                     TCGA-DU-7018                      TCGA-DU-7019 
"DEL PEAK 20(22Q13.31) WILD-TYPE" "DEL PEAK 20(22Q13.31) WILD-TYPE" 
                     TCGA-DU-7290                      TCGA-DU-7292 
  "DEL PEAK 20(22Q13.31) MUTATED" "DEL PEAK 20(22Q13.31) WILD-TYPE" 
                     TCGA-DU-7294                      TCGA-DU-7298 
"DEL PEAK 20(22Q13.31) WILD-TYPE"   "DEL PEAK 20(22Q13.31) MUTATED" 
                     TCGA-DU-7299                      TCGA-DU-7300 
"DEL PEAK 20(22Q13.31) WILD-TYPE" "DEL PEAK 20(22Q13.31) WILD-TYPE" 
                     TCGA-DU-7301                      TCGA-DU-7302 
"DEL PEAK 20(22Q13.31) WILD-TYPE" "DEL PEAK 20(22Q13.31) WILD-TYPE" 
                     TCGA-DU-7304                      TCGA-DU-7306 
"DEL PEAK 20(22Q13.31) WILD-TYPE"   "DEL PEAK 20(22Q13.31) MUTATED" 
                     TCGA-DU-7309                      TCGA-E1-5302 
"DEL PEAK 20(22Q13.31) WILD-TYPE" "DEL PEAK 20(22Q13.31) WILD-TYPE" 
                     TCGA-E1-5303                      TCGA-E1-5304 
  "DEL PEAK 20(22Q13.31) MUTATED"   "DEL PEAK 20(22Q13.31) MUTATED" 
                     TCGA-E1-5305                      TCGA-E1-5307 
"DEL PEAK 20(22Q13.31) WILD-TYPE" "DEL PEAK 20(22Q13.31) WILD-TYPE" 
                     TCGA-E1-5311                      TCGA-E1-5318 
"DEL PEAK 20(22Q13.31) WILD-TYPE" "DEL PEAK 20(22Q13.31) WILD-TYPE" 
                     TCGA-E1-5319                      TCGA-E1-5322 
"DEL PEAK 20(22Q13.31) WILD-TYPE"   "DEL PEAK 20(22Q13.31) MUTATED" 
                     TCGA-EZ-7264                      TCGA-FG-5962 
"DEL PEAK 20(22Q13.31) WILD-TYPE" "DEL PEAK 20(22Q13.31) WILD-TYPE" 
                     TCGA-FG-5963                      TCGA-FG-5964 
"DEL PEAK 20(22Q13.31) WILD-TYPE" "DEL PEAK 20(22Q13.31) WILD-TYPE" 
                     TCGA-FG-5965                      TCGA-FG-6688 
"DEL PEAK 20(22Q13.31) WILD-TYPE" "DEL PEAK 20(22Q13.31) WILD-TYPE" 
                     TCGA-FG-6689                      TCGA-FG-6690 
"DEL PEAK 20(22Q13.31) WILD-TYPE" "DEL PEAK 20(22Q13.31) WILD-TYPE" 
                     TCGA-FG-6691                      TCGA-FG-6692 
"DEL PEAK 20(22Q13.31) WILD-TYPE" "DEL PEAK 20(22Q13.31) WILD-TYPE" 
                     TCGA-FG-7634                      TCGA-FG-7636 
"DEL PEAK 20(22Q13.31) WILD-TYPE" "DEL PEAK 20(22Q13.31) WILD-TYPE" 
                     TCGA-FG-7638                      TCGA-FG-7643 
"DEL PEAK 20(22Q13.31) WILD-TYPE"   "DEL PEAK 20(22Q13.31) MUTATED" 
                     TCGA-FN-7833                      TCGA-HT-7467 
"DEL PEAK 20(22Q13.31) WILD-TYPE" "DEL PEAK 20(22Q13.31) WILD-TYPE" 
                     TCGA-HT-7468                      TCGA-HT-7470 
"DEL PEAK 20(22Q13.31) WILD-TYPE" "DEL PEAK 20(22Q13.31) WILD-TYPE" 
                     TCGA-HT-7472                      TCGA-HT-7473 
"DEL PEAK 20(22Q13.31) WILD-TYPE" "DEL PEAK 20(22Q13.31) WILD-TYPE" 
                     TCGA-HT-7474                      TCGA-HT-7475 
"DEL PEAK 20(22Q13.31) WILD-TYPE" "DEL PEAK 20(22Q13.31) WILD-TYPE" 
                     TCGA-HT-7476                      TCGA-HT-7478 
"DEL PEAK 20(22Q13.31) WILD-TYPE" "DEL PEAK 20(22Q13.31) WILD-TYPE" 
                     TCGA-HT-7479                      TCGA-HT-7480 
"DEL PEAK 20(22Q13.31) WILD-TYPE" "DEL PEAK 20(22Q13.31) WILD-TYPE" 
                     TCGA-HT-7481                      TCGA-HT-7482 
"DEL PEAK 20(22Q13.31) WILD-TYPE" "DEL PEAK 20(22Q13.31) WILD-TYPE" 
                     TCGA-HT-7483                      TCGA-HT-7485 
"DEL PEAK 20(22Q13.31) WILD-TYPE" "DEL PEAK 20(22Q13.31) WILD-TYPE" 
                     TCGA-HT-7601                      TCGA-HT-7602 
"DEL PEAK 20(22Q13.31) WILD-TYPE" "DEL PEAK 20(22Q13.31) WILD-TYPE" 
                     TCGA-HT-7603                      TCGA-HT-7604 
"DEL PEAK 20(22Q13.31) WILD-TYPE" "DEL PEAK 20(22Q13.31) WILD-TYPE" 
                     TCGA-HT-7605                      TCGA-HT-7606 
"DEL PEAK 20(22Q13.31) WILD-TYPE" "DEL PEAK 20(22Q13.31) WILD-TYPE" 
                     TCGA-HT-7607                      TCGA-HT-7608 
"DEL PEAK 20(22Q13.31) WILD-TYPE" "DEL PEAK 20(22Q13.31) WILD-TYPE" 
                     TCGA-HT-7609                      TCGA-HT-7610 
"DEL PEAK 20(22Q13.31) WILD-TYPE" "DEL PEAK 20(22Q13.31) WILD-TYPE" 
                     TCGA-HW-7486                      TCGA-HW-7487 
"DEL PEAK 20(22Q13.31) WILD-TYPE" "DEL PEAK 20(22Q13.31) WILD-TYPE" 
                     TCGA-HW-7489                      TCGA-HW-7490 
"DEL PEAK 20(22Q13.31) WILD-TYPE" "DEL PEAK 20(22Q13.31) WILD-TYPE" 
                     TCGA-HW-7491                      TCGA-HW-7493 
"DEL PEAK 20(22Q13.31) WILD-TYPE" "DEL PEAK 20(22Q13.31) WILD-TYPE" 
                     TCGA-HW-7495                      TCGA-IK-7675 
"DEL PEAK 20(22Q13.31) WILD-TYPE" "DEL PEAK 20(22Q13.31) WILD-TYPE" 
                     TCGA-IK-8125 
"DEL PEAK 20(22Q13.31) WILD-TYPE" 
[1] "hr=" "1.4"
D34V2, continuous
D34V3, binary
[1] "tbl2"
                                 cls
clus                              [,1] [,2]
  DEL PEAK 20(22Q13.31) MUTATED     10   11
  DEL PEAK 20(22Q13.31) WILD-TYPE   52   72
        clus
vv       DEL PEAK 20(22Q13.31) MUTATED DEL PEAK 20(22Q13.31) WILD-TYPE
  FEMALE                            10                              52
  MALE                              11                              72
D34V4, continuous
D34V5, multiclass
                   clus
vv                  DEL PEAK 20(22Q13.31) MUTATED
  ASTROCYTOMA                                  12
  OLIGOASTROCYTOMA                              6
  OLIGODENDROGLIOMA                             3
                   clus
vv                  DEL PEAK 20(22Q13.31) WILD-TYPE
  ASTROCYTOMA                                    38
  OLIGOASTROCYTOMA                               30
  OLIGODENDROGLIOMA                              55
D34V6, binary
[1] "tbl2"
                                 cls
clus                              [,1] [,2]
  DEL PEAK 20(22Q13.31) MUTATED      9   12
  DEL PEAK 20(22Q13.31) WILD-TYPE   50   74
     clus
vv    DEL PEAK 20(22Q13.31) MUTATED DEL PEAK 20(22Q13.31) WILD-TYPE
  NO                             12                              74
  YES                             9                              50
D34V7, binary
[1] "tbl2"
                                 cls
clus                              [,1] [,2]
  DEL PEAK 20(22Q13.31) MUTATED      9   12
  DEL PEAK 20(22Q13.31) WILD-TYPE   65   59
     clus
vv    DEL PEAK 20(22Q13.31) MUTATED DEL PEAK 20(22Q13.31) WILD-TYPE
  NO                             12                              59
  YES                             9                              65

Clustering(35) Variable = Del Peak 21(Xp22.31) mutation analysis
D35V1, survival
                    TCGA-CS-4938                     TCGA-CS-4941 
  "DEL PEAK 21(XP22.31) MUTATED" "DEL PEAK 21(XP22.31) WILD-TYPE" 
                    TCGA-CS-4942                     TCGA-CS-4943 
"DEL PEAK 21(XP22.31) WILD-TYPE" "DEL PEAK 21(XP22.31) WILD-TYPE" 
                    TCGA-CS-4944                     TCGA-CS-5390 
"DEL PEAK 21(XP22.31) WILD-TYPE" "DEL PEAK 21(XP22.31) WILD-TYPE" 
                    TCGA-CS-5393                     TCGA-CS-5394 
"DEL PEAK 21(XP22.31) WILD-TYPE" "DEL PEAK 21(XP22.31) WILD-TYPE" 
                    TCGA-CS-5395                     TCGA-CS-5396 
"DEL PEAK 21(XP22.31) WILD-TYPE" "DEL PEAK 21(XP22.31) WILD-TYPE" 
                    TCGA-CS-5397                     TCGA-CS-6186 
"DEL PEAK 21(XP22.31) WILD-TYPE" "DEL PEAK 21(XP22.31) WILD-TYPE" 
                    TCGA-CS-6188                     TCGA-CS-6290 
"DEL PEAK 21(XP22.31) WILD-TYPE" "DEL PEAK 21(XP22.31) WILD-TYPE" 
                    TCGA-CS-6665                     TCGA-CS-6666 
"DEL PEAK 21(XP22.31) WILD-TYPE"   "DEL PEAK 21(XP22.31) MUTATED" 
                    TCGA-CS-6667                     TCGA-CS-6668 
"DEL PEAK 21(XP22.31) WILD-TYPE" "DEL PEAK 21(XP22.31) WILD-TYPE" 
                    TCGA-CS-6669                     TCGA-CS-6670 
"DEL PEAK 21(XP22.31) WILD-TYPE" "DEL PEAK 21(XP22.31) WILD-TYPE" 
                    TCGA-DB-5270                     TCGA-DB-5273 
"DEL PEAK 21(XP22.31) WILD-TYPE" "DEL PEAK 21(XP22.31) WILD-TYPE" 
                    TCGA-DB-5274                     TCGA-DB-5275 
"DEL PEAK 21(XP22.31) WILD-TYPE"   "DEL PEAK 21(XP22.31) MUTATED" 
                    TCGA-DB-5276                     TCGA-DB-5277 
"DEL PEAK 21(XP22.31) WILD-TYPE" "DEL PEAK 21(XP22.31) WILD-TYPE" 
                    TCGA-DB-5278                     TCGA-DB-5279 
"DEL PEAK 21(XP22.31) WILD-TYPE"   "DEL PEAK 21(XP22.31) MUTATED" 
                    TCGA-DB-5280                     TCGA-DB-5281 
"DEL PEAK 21(XP22.31) WILD-TYPE"   "DEL PEAK 21(XP22.31) MUTATED" 
                    TCGA-DH-5140                     TCGA-DH-5141 
  "DEL PEAK 21(XP22.31) MUTATED" "DEL PEAK 21(XP22.31) WILD-TYPE" 
                    TCGA-DH-5142                     TCGA-DH-5143 
"DEL PEAK 21(XP22.31) WILD-TYPE" "DEL PEAK 21(XP22.31) WILD-TYPE" 
                    TCGA-DH-5144                     TCGA-DU-5847 
"DEL PEAK 21(XP22.31) WILD-TYPE"   "DEL PEAK 21(XP22.31) MUTATED" 
                    TCGA-DU-5849                     TCGA-DU-5851 
"DEL PEAK 21(XP22.31) WILD-TYPE" "DEL PEAK 21(XP22.31) WILD-TYPE" 
                    TCGA-DU-5852                     TCGA-DU-5853 
"DEL PEAK 21(XP22.31) WILD-TYPE"   "DEL PEAK 21(XP22.31) MUTATED" 
                    TCGA-DU-5854                     TCGA-DU-5855 
"DEL PEAK 21(XP22.31) WILD-TYPE" "DEL PEAK 21(XP22.31) WILD-TYPE" 
                    TCGA-DU-5870                     TCGA-DU-5871 
"DEL PEAK 21(XP22.31) WILD-TYPE"   "DEL PEAK 21(XP22.31) MUTATED" 
                    TCGA-DU-5872                     TCGA-DU-5874 
  "DEL PEAK 21(XP22.31) MUTATED" "DEL PEAK 21(XP22.31) WILD-TYPE" 
                    TCGA-DU-6392                     TCGA-DU-6393 
"DEL PEAK 21(XP22.31) WILD-TYPE" "DEL PEAK 21(XP22.31) WILD-TYPE" 
                    TCGA-DU-6394                     TCGA-DU-6395 
"DEL PEAK 21(XP22.31) WILD-TYPE" "DEL PEAK 21(XP22.31) WILD-TYPE" 
                    TCGA-DU-6396                     TCGA-DU-6397 
"DEL PEAK 21(XP22.31) WILD-TYPE" "DEL PEAK 21(XP22.31) WILD-TYPE" 
                    TCGA-DU-6399                     TCGA-DU-6400 
  "DEL PEAK 21(XP22.31) MUTATED"   "DEL PEAK 21(XP22.31) MUTATED" 
                    TCGA-DU-6401                     TCGA-DU-6402 
  "DEL PEAK 21(XP22.31) MUTATED" "DEL PEAK 21(XP22.31) WILD-TYPE" 
                    TCGA-DU-6403                     TCGA-DU-6404 
"DEL PEAK 21(XP22.31) WILD-TYPE" "DEL PEAK 21(XP22.31) WILD-TYPE" 
                    TCGA-DU-6405                     TCGA-DU-6406 
"DEL PEAK 21(XP22.31) WILD-TYPE" "DEL PEAK 21(XP22.31) WILD-TYPE" 
                    TCGA-DU-6407                     TCGA-DU-6408 
  "DEL PEAK 21(XP22.31) MUTATED" "DEL PEAK 21(XP22.31) WILD-TYPE" 
                    TCGA-DU-6410                     TCGA-DU-6542 
  "DEL PEAK 21(XP22.31) MUTATED"   "DEL PEAK 21(XP22.31) MUTATED" 
                    TCGA-DU-7006                     TCGA-DU-7007 
  "DEL PEAK 21(XP22.31) MUTATED"   "DEL PEAK 21(XP22.31) MUTATED" 
                    TCGA-DU-7008                     TCGA-DU-7009 
  "DEL PEAK 21(XP22.31) MUTATED" "DEL PEAK 21(XP22.31) WILD-TYPE" 
                    TCGA-DU-7010                     TCGA-DU-7011 
"DEL PEAK 21(XP22.31) WILD-TYPE" "DEL PEAK 21(XP22.31) WILD-TYPE" 
                    TCGA-DU-7012                     TCGA-DU-7013 
"DEL PEAK 21(XP22.31) WILD-TYPE" "DEL PEAK 21(XP22.31) WILD-TYPE" 
                    TCGA-DU-7014                     TCGA-DU-7015 
"DEL PEAK 21(XP22.31) WILD-TYPE" "DEL PEAK 21(XP22.31) WILD-TYPE" 
                    TCGA-DU-7018                     TCGA-DU-7019 
  "DEL PEAK 21(XP22.31) MUTATED" "DEL PEAK 21(XP22.31) WILD-TYPE" 
                    TCGA-DU-7290                     TCGA-DU-7292 
"DEL PEAK 21(XP22.31) WILD-TYPE" "DEL PEAK 21(XP22.31) WILD-TYPE" 
                    TCGA-DU-7294                     TCGA-DU-7298 
  "DEL PEAK 21(XP22.31) MUTATED"   "DEL PEAK 21(XP22.31) MUTATED" 
                    TCGA-DU-7299                     TCGA-DU-7300 
"DEL PEAK 21(XP22.31) WILD-TYPE" "DEL PEAK 21(XP22.31) WILD-TYPE" 
                    TCGA-DU-7301                     TCGA-DU-7302 
"DEL PEAK 21(XP22.31) WILD-TYPE"   "DEL PEAK 21(XP22.31) MUTATED" 
                    TCGA-DU-7304                     TCGA-DU-7306 
"DEL PEAK 21(XP22.31) WILD-TYPE" "DEL PEAK 21(XP22.31) WILD-TYPE" 
                    TCGA-DU-7309                     TCGA-E1-5302 
"DEL PEAK 21(XP22.31) WILD-TYPE" "DEL PEAK 21(XP22.31) WILD-TYPE" 
                    TCGA-E1-5303                     TCGA-E1-5304 
"DEL PEAK 21(XP22.31) WILD-TYPE"   "DEL PEAK 21(XP22.31) MUTATED" 
                    TCGA-E1-5305                     TCGA-E1-5307 
  "DEL PEAK 21(XP22.31) MUTATED"   "DEL PEAK 21(XP22.31) MUTATED" 
                    TCGA-E1-5311                     TCGA-E1-5318 
  "DEL PEAK 21(XP22.31) MUTATED" "DEL PEAK 21(XP22.31) WILD-TYPE" 
                    TCGA-E1-5319                     TCGA-E1-5322 
"DEL PEAK 21(XP22.31) WILD-TYPE"   "DEL PEAK 21(XP22.31) MUTATED" 
                    TCGA-EZ-7264                     TCGA-FG-5962 
  "DEL PEAK 21(XP22.31) MUTATED" "DEL PEAK 21(XP22.31) WILD-TYPE" 
                    TCGA-FG-5963                     TCGA-FG-5964 
  "DEL PEAK 21(XP22.31) MUTATED" "DEL PEAK 21(XP22.31) WILD-TYPE" 
                    TCGA-FG-5965                     TCGA-FG-6688 
"DEL PEAK 21(XP22.31) WILD-TYPE" "DEL PEAK 21(XP22.31) WILD-TYPE" 
                    TCGA-FG-6689                     TCGA-FG-6690 
"DEL PEAK 21(XP22.31) WILD-TYPE" "DEL PEAK 21(XP22.31) WILD-TYPE" 
                    TCGA-FG-6691                     TCGA-FG-6692 
"DEL PEAK 21(XP22.31) WILD-TYPE" "DEL PEAK 21(XP22.31) WILD-TYPE" 
                    TCGA-FG-7634                     TCGA-FG-7636 
"DEL PEAK 21(XP22.31) WILD-TYPE"   "DEL PEAK 21(XP22.31) MUTATED" 
                    TCGA-FG-7638                     TCGA-FG-7643 
"DEL PEAK 21(XP22.31) WILD-TYPE" "DEL PEAK 21(XP22.31) WILD-TYPE" 
                    TCGA-FN-7833                     TCGA-HT-7467 
"DEL PEAK 21(XP22.31) WILD-TYPE" "DEL PEAK 21(XP22.31) WILD-TYPE" 
                    TCGA-HT-7468                     TCGA-HT-7470 
"DEL PEAK 21(XP22.31) WILD-TYPE" "DEL PEAK 21(XP22.31) WILD-TYPE" 
                    TCGA-HT-7472                     TCGA-HT-7473 
"DEL PEAK 21(XP22.31) WILD-TYPE" "DEL PEAK 21(XP22.31) WILD-TYPE" 
                    TCGA-HT-7474                     TCGA-HT-7475 
"DEL PEAK 21(XP22.31) WILD-TYPE" "DEL PEAK 21(XP22.31) WILD-TYPE" 
                    TCGA-HT-7476                     TCGA-HT-7478 
  "DEL PEAK 21(XP22.31) MUTATED" "DEL PEAK 21(XP22.31) WILD-TYPE" 
                    TCGA-HT-7479                     TCGA-HT-7480 
"DEL PEAK 21(XP22.31) WILD-TYPE" "DEL PEAK 21(XP22.31) WILD-TYPE" 
                    TCGA-HT-7481                     TCGA-HT-7482 
"DEL PEAK 21(XP22.31) WILD-TYPE" "DEL PEAK 21(XP22.31) WILD-TYPE" 
                    TCGA-HT-7483                     TCGA-HT-7485 
"DEL PEAK 21(XP22.31) WILD-TYPE" "DEL PEAK 21(XP22.31) WILD-TYPE" 
                    TCGA-HT-7601                     TCGA-HT-7602 
"DEL PEAK 21(XP22.31) WILD-TYPE" "DEL PEAK 21(XP22.31) WILD-TYPE" 
                    TCGA-HT-7603                     TCGA-HT-7604 
"DEL PEAK 21(XP22.31) WILD-TYPE"   "DEL PEAK 21(XP22.31) MUTATED" 
                    TCGA-HT-7605                     TCGA-HT-7606 
"DEL PEAK 21(XP22.31) WILD-TYPE" "DEL PEAK 21(XP22.31) WILD-TYPE" 
                    TCGA-HT-7607                     TCGA-HT-7608 
"DEL PEAK 21(XP22.31) WILD-TYPE" "DEL PEAK 21(XP22.31) WILD-TYPE" 
                    TCGA-HT-7609                     TCGA-HT-7610 
  "DEL PEAK 21(XP22.31) MUTATED" "DEL PEAK 21(XP22.31) WILD-TYPE" 
                    TCGA-HW-7486                     TCGA-HW-7487 
"DEL PEAK 21(XP22.31) WILD-TYPE" "DEL PEAK 21(XP22.31) WILD-TYPE" 
                    TCGA-HW-7489                     TCGA-HW-7490 
"DEL PEAK 21(XP22.31) WILD-TYPE" "DEL PEAK 21(XP22.31) WILD-TYPE" 
                    TCGA-HW-7491                     TCGA-HW-7493 
  "DEL PEAK 21(XP22.31) MUTATED" "DEL PEAK 21(XP22.31) WILD-TYPE" 
                    TCGA-HW-7495                     TCGA-IK-7675 
"DEL PEAK 21(XP22.31) WILD-TYPE"   "DEL PEAK 21(XP22.31) MUTATED" 
                    TCGA-IK-8125 
"DEL PEAK 21(XP22.31) WILD-TYPE" 
                    TCGA-CS-4938                     TCGA-CS-4941 
  "DEL PEAK 21(XP22.31) MUTATED" "DEL PEAK 21(XP22.31) WILD-TYPE" 
                    TCGA-CS-4942                     TCGA-CS-4943 
"DEL PEAK 21(XP22.31) WILD-TYPE" "DEL PEAK 21(XP22.31) WILD-TYPE" 
                    TCGA-CS-4944                     TCGA-CS-5390 
"DEL PEAK 21(XP22.31) WILD-TYPE" "DEL PEAK 21(XP22.31) WILD-TYPE" 
                    TCGA-CS-5393                     TCGA-CS-5394 
"DEL PEAK 21(XP22.31) WILD-TYPE" "DEL PEAK 21(XP22.31) WILD-TYPE" 
                    TCGA-CS-5395                     TCGA-CS-5396 
"DEL PEAK 21(XP22.31) WILD-TYPE" "DEL PEAK 21(XP22.31) WILD-TYPE" 
                    TCGA-CS-5397                     TCGA-CS-6186 
"DEL PEAK 21(XP22.31) WILD-TYPE" "DEL PEAK 21(XP22.31) WILD-TYPE" 
                    TCGA-CS-6188                     TCGA-CS-6290 
"DEL PEAK 21(XP22.31) WILD-TYPE" "DEL PEAK 21(XP22.31) WILD-TYPE" 
                    TCGA-CS-6665                     TCGA-CS-6666 
"DEL PEAK 21(XP22.31) WILD-TYPE"   "DEL PEAK 21(XP22.31) MUTATED" 
                    TCGA-CS-6667                     TCGA-CS-6668 
"DEL PEAK 21(XP22.31) WILD-TYPE" "DEL PEAK 21(XP22.31) WILD-TYPE" 
                    TCGA-CS-6669                     TCGA-CS-6670 
"DEL PEAK 21(XP22.31) WILD-TYPE" "DEL PEAK 21(XP22.31) WILD-TYPE" 
                    TCGA-DB-5270                     TCGA-DB-5273 
"DEL PEAK 21(XP22.31) WILD-TYPE" "DEL PEAK 21(XP22.31) WILD-TYPE" 
                    TCGA-DB-5274                     TCGA-DB-5275 
"DEL PEAK 21(XP22.31) WILD-TYPE"   "DEL PEAK 21(XP22.31) MUTATED" 
                    TCGA-DB-5276                     TCGA-DB-5277 
"DEL PEAK 21(XP22.31) WILD-TYPE" "DEL PEAK 21(XP22.31) WILD-TYPE" 
                    TCGA-DB-5278                     TCGA-DB-5279 
"DEL PEAK 21(XP22.31) WILD-TYPE"   "DEL PEAK 21(XP22.31) MUTATED" 
                    TCGA-DB-5280                     TCGA-DB-5281 
"DEL PEAK 21(XP22.31) WILD-TYPE"   "DEL PEAK 21(XP22.31) MUTATED" 
                    TCGA-DH-5140                     TCGA-DH-5141 
  "DEL PEAK 21(XP22.31) MUTATED" "DEL PEAK 21(XP22.31) WILD-TYPE" 
                    TCGA-DH-5142                     TCGA-DH-5143 
"DEL PEAK 21(XP22.31) WILD-TYPE" "DEL PEAK 21(XP22.31) WILD-TYPE" 
                    TCGA-DH-5144                     TCGA-DU-5847 
"DEL PEAK 21(XP22.31) WILD-TYPE"   "DEL PEAK 21(XP22.31) MUTATED" 
                    TCGA-DU-5849                     TCGA-DU-5851 
"DEL PEAK 21(XP22.31) WILD-TYPE" "DEL PEAK 21(XP22.31) WILD-TYPE" 
                    TCGA-DU-5852                     TCGA-DU-5853 
"DEL PEAK 21(XP22.31) WILD-TYPE"   "DEL PEAK 21(XP22.31) MUTATED" 
                    TCGA-DU-5854                     TCGA-DU-5855 
"DEL PEAK 21(XP22.31) WILD-TYPE" "DEL PEAK 21(XP22.31) WILD-TYPE" 
                    TCGA-DU-5870                     TCGA-DU-5871 
"DEL PEAK 21(XP22.31) WILD-TYPE"   "DEL PEAK 21(XP22.31) MUTATED" 
                    TCGA-DU-5872                     TCGA-DU-5874 
  "DEL PEAK 21(XP22.31) MUTATED" "DEL PEAK 21(XP22.31) WILD-TYPE" 
                    TCGA-DU-6392                     TCGA-DU-6393 
"DEL PEAK 21(XP22.31) WILD-TYPE" "DEL PEAK 21(XP22.31) WILD-TYPE" 
                    TCGA-DU-6394                     TCGA-DU-6395 
"DEL PEAK 21(XP22.31) WILD-TYPE" "DEL PEAK 21(XP22.31) WILD-TYPE" 
                    TCGA-DU-6396                     TCGA-DU-6397 
"DEL PEAK 21(XP22.31) WILD-TYPE" "DEL PEAK 21(XP22.31) WILD-TYPE" 
                    TCGA-DU-6399                     TCGA-DU-6400 
  "DEL PEAK 21(XP22.31) MUTATED"   "DEL PEAK 21(XP22.31) MUTATED" 
                    TCGA-DU-6401                     TCGA-DU-6402 
  "DEL PEAK 21(XP22.31) MUTATED" "DEL PEAK 21(XP22.31) WILD-TYPE" 
                    TCGA-DU-6403                     TCGA-DU-6404 
"DEL PEAK 21(XP22.31) WILD-TYPE" "DEL PEAK 21(XP22.31) WILD-TYPE" 
                    TCGA-DU-6405                     TCGA-DU-6406 
"DEL PEAK 21(XP22.31) WILD-TYPE" "DEL PEAK 21(XP22.31) WILD-TYPE" 
                    TCGA-DU-6407                     TCGA-DU-6408 
  "DEL PEAK 21(XP22.31) MUTATED" "DEL PEAK 21(XP22.31) WILD-TYPE" 
                    TCGA-DU-6410                     TCGA-DU-6542 
  "DEL PEAK 21(XP22.31) MUTATED"   "DEL PEAK 21(XP22.31) MUTATED" 
                    TCGA-DU-7006                     TCGA-DU-7007 
  "DEL PEAK 21(XP22.31) MUTATED"   "DEL PEAK 21(XP22.31) MUTATED" 
                    TCGA-DU-7008                     TCGA-DU-7009 
  "DEL PEAK 21(XP22.31) MUTATED" "DEL PEAK 21(XP22.31) WILD-TYPE" 
                    TCGA-DU-7010                     TCGA-DU-7011 
"DEL PEAK 21(XP22.31) WILD-TYPE" "DEL PEAK 21(XP22.31) WILD-TYPE" 
                    TCGA-DU-7012                     TCGA-DU-7013 
"DEL PEAK 21(XP22.31) WILD-TYPE" "DEL PEAK 21(XP22.31) WILD-TYPE" 
                    TCGA-DU-7014                     TCGA-DU-7015 
"DEL PEAK 21(XP22.31) WILD-TYPE" "DEL PEAK 21(XP22.31) WILD-TYPE" 
                    TCGA-DU-7018                     TCGA-DU-7019 
  "DEL PEAK 21(XP22.31) MUTATED" "DEL PEAK 21(XP22.31) WILD-TYPE" 
                    TCGA-DU-7290                     TCGA-DU-7292 
"DEL PEAK 21(XP22.31) WILD-TYPE" "DEL PEAK 21(XP22.31) WILD-TYPE" 
                    TCGA-DU-7294                     TCGA-DU-7298 
  "DEL PEAK 21(XP22.31) MUTATED"   "DEL PEAK 21(XP22.31) MUTATED" 
                    TCGA-DU-7299                     TCGA-DU-7300 
"DEL PEAK 21(XP22.31) WILD-TYPE" "DEL PEAK 21(XP22.31) WILD-TYPE" 
                    TCGA-DU-7301                     TCGA-DU-7302 
"DEL PEAK 21(XP22.31) WILD-TYPE"   "DEL PEAK 21(XP22.31) MUTATED" 
                    TCGA-DU-7304                     TCGA-DU-7306 
"DEL PEAK 21(XP22.31) WILD-TYPE" "DEL PEAK 21(XP22.31) WILD-TYPE" 
                    TCGA-DU-7309                     TCGA-E1-5302 
"DEL PEAK 21(XP22.31) WILD-TYPE" "DEL PEAK 21(XP22.31) WILD-TYPE" 
                    TCGA-E1-5303                     TCGA-E1-5304 
"DEL PEAK 21(XP22.31) WILD-TYPE"   "DEL PEAK 21(XP22.31) MUTATED" 
                    TCGA-E1-5305                     TCGA-E1-5307 
  "DEL PEAK 21(XP22.31) MUTATED"   "DEL PEAK 21(XP22.31) MUTATED" 
                    TCGA-E1-5311                     TCGA-E1-5318 
  "DEL PEAK 21(XP22.31) MUTATED" "DEL PEAK 21(XP22.31) WILD-TYPE" 
                    TCGA-E1-5319                     TCGA-E1-5322 
"DEL PEAK 21(XP22.31) WILD-TYPE"   "DEL PEAK 21(XP22.31) MUTATED" 
                    TCGA-EZ-7264                     TCGA-FG-5962 
  "DEL PEAK 21(XP22.31) MUTATED" "DEL PEAK 21(XP22.31) WILD-TYPE" 
                    TCGA-FG-5963                     TCGA-FG-5964 
  "DEL PEAK 21(XP22.31) MUTATED" "DEL PEAK 21(XP22.31) WILD-TYPE" 
                    TCGA-FG-5965                     TCGA-FG-6688 
"DEL PEAK 21(XP22.31) WILD-TYPE" "DEL PEAK 21(XP22.31) WILD-TYPE" 
                    TCGA-FG-6689                     TCGA-FG-6690 
"DEL PEAK 21(XP22.31) WILD-TYPE" "DEL PEAK 21(XP22.31) WILD-TYPE" 
                    TCGA-FG-6691                     TCGA-FG-6692 
"DEL PEAK 21(XP22.31) WILD-TYPE" "DEL PEAK 21(XP22.31) WILD-TYPE" 
                    TCGA-FG-7634                     TCGA-FG-7636 
"DEL PEAK 21(XP22.31) WILD-TYPE"   "DEL PEAK 21(XP22.31) MUTATED" 
                    TCGA-FG-7638                     TCGA-FG-7643 
"DEL PEAK 21(XP22.31) WILD-TYPE" "DEL PEAK 21(XP22.31) WILD-TYPE" 
                    TCGA-FN-7833                     TCGA-HT-7467 
"DEL PEAK 21(XP22.31) WILD-TYPE" "DEL PEAK 21(XP22.31) WILD-TYPE" 
                    TCGA-HT-7468                     TCGA-HT-7470 
"DEL PEAK 21(XP22.31) WILD-TYPE" "DEL PEAK 21(XP22.31) WILD-TYPE" 
                    TCGA-HT-7472                     TCGA-HT-7473 
"DEL PEAK 21(XP22.31) WILD-TYPE" "DEL PEAK 21(XP22.31) WILD-TYPE" 
                    TCGA-HT-7474                     TCGA-HT-7475 
"DEL PEAK 21(XP22.31) WILD-TYPE" "DEL PEAK 21(XP22.31) WILD-TYPE" 
                    TCGA-HT-7476                     TCGA-HT-7478 
  "DEL PEAK 21(XP22.31) MUTATED" "DEL PEAK 21(XP22.31) WILD-TYPE" 
                    TCGA-HT-7479                     TCGA-HT-7480 
"DEL PEAK 21(XP22.31) WILD-TYPE" "DEL PEAK 21(XP22.31) WILD-TYPE" 
                    TCGA-HT-7481                     TCGA-HT-7482 
"DEL PEAK 21(XP22.31) WILD-TYPE" "DEL PEAK 21(XP22.31) WILD-TYPE" 
                    TCGA-HT-7483                     TCGA-HT-7485 
"DEL PEAK 21(XP22.31) WILD-TYPE" "DEL PEAK 21(XP22.31) WILD-TYPE" 
                    TCGA-HT-7601                     TCGA-HT-7602 
"DEL PEAK 21(XP22.31) WILD-TYPE" "DEL PEAK 21(XP22.31) WILD-TYPE" 
                    TCGA-HT-7603                     TCGA-HT-7604 
"DEL PEAK 21(XP22.31) WILD-TYPE"   "DEL PEAK 21(XP22.31) MUTATED" 
                    TCGA-HT-7605                     TCGA-HT-7606 
"DEL PEAK 21(XP22.31) WILD-TYPE" "DEL PEAK 21(XP22.31) WILD-TYPE" 
                    TCGA-HT-7607                     TCGA-HT-7608 
"DEL PEAK 21(XP22.31) WILD-TYPE" "DEL PEAK 21(XP22.31) WILD-TYPE" 
                    TCGA-HT-7609                     TCGA-HT-7610 
  "DEL PEAK 21(XP22.31) MUTATED" "DEL PEAK 21(XP22.31) WILD-TYPE" 
                    TCGA-HW-7486                     TCGA-HW-7487 
"DEL PEAK 21(XP22.31) WILD-TYPE" "DEL PEAK 21(XP22.31) WILD-TYPE" 
                    TCGA-HW-7489                     TCGA-HW-7490 
"DEL PEAK 21(XP22.31) WILD-TYPE" "DEL PEAK 21(XP22.31) WILD-TYPE" 
                    TCGA-HW-7491                     TCGA-HW-7493 
  "DEL PEAK 21(XP22.31) MUTATED" "DEL PEAK 21(XP22.31) WILD-TYPE" 
                    TCGA-HW-7495                     TCGA-IK-7675 
"DEL PEAK 21(XP22.31) WILD-TYPE"   "DEL PEAK 21(XP22.31) MUTATED" 
                    TCGA-IK-8125 
"DEL PEAK 21(XP22.31) WILD-TYPE" 
                    TCGA-CS-4938                     TCGA-CS-4941 
  "DEL PEAK 21(XP22.31) MUTATED" "DEL PEAK 21(XP22.31) WILD-TYPE" 
                    TCGA-CS-4942                     TCGA-CS-4943 
"DEL PEAK 21(XP22.31) WILD-TYPE" "DEL PEAK 21(XP22.31) WILD-TYPE" 
                    TCGA-CS-4944                     TCGA-CS-5390 
"DEL PEAK 21(XP22.31) WILD-TYPE" "DEL PEAK 21(XP22.31) WILD-TYPE" 
                    TCGA-CS-5393                     TCGA-CS-5394 
"DEL PEAK 21(XP22.31) WILD-TYPE" "DEL PEAK 21(XP22.31) WILD-TYPE" 
                    TCGA-CS-5395                     TCGA-CS-5396 
"DEL PEAK 21(XP22.31) WILD-TYPE" "DEL PEAK 21(XP22.31) WILD-TYPE" 
                    TCGA-CS-5397                     TCGA-CS-6186 
"DEL PEAK 21(XP22.31) WILD-TYPE" "DEL PEAK 21(XP22.31) WILD-TYPE" 
                    TCGA-CS-6188                     TCGA-CS-6290 
"DEL PEAK 21(XP22.31) WILD-TYPE" "DEL PEAK 21(XP22.31) WILD-TYPE" 
                    TCGA-CS-6665                     TCGA-CS-6666 
"DEL PEAK 21(XP22.31) WILD-TYPE"   "DEL PEAK 21(XP22.31) MUTATED" 
                    TCGA-CS-6667                     TCGA-CS-6668 
"DEL PEAK 21(XP22.31) WILD-TYPE" "DEL PEAK 21(XP22.31) WILD-TYPE" 
                    TCGA-CS-6669                     TCGA-CS-6670 
"DEL PEAK 21(XP22.31) WILD-TYPE" "DEL PEAK 21(XP22.31) WILD-TYPE" 
                    TCGA-DB-5270                     TCGA-DB-5273 
"DEL PEAK 21(XP22.31) WILD-TYPE" "DEL PEAK 21(XP22.31) WILD-TYPE" 
                    TCGA-DB-5274                     TCGA-DB-5275 
"DEL PEAK 21(XP22.31) WILD-TYPE"   "DEL PEAK 21(XP22.31) MUTATED" 
                    TCGA-DB-5276                     TCGA-DB-5277 
"DEL PEAK 21(XP22.31) WILD-TYPE" "DEL PEAK 21(XP22.31) WILD-TYPE" 
                    TCGA-DB-5278                     TCGA-DB-5279 
"DEL PEAK 21(XP22.31) WILD-TYPE"   "DEL PEAK 21(XP22.31) MUTATED" 
                    TCGA-DB-5280                     TCGA-DB-5281 
"DEL PEAK 21(XP22.31) WILD-TYPE"   "DEL PEAK 21(XP22.31) MUTATED" 
                    TCGA-DH-5140                     TCGA-DH-5141 
  "DEL PEAK 21(XP22.31) MUTATED" "DEL PEAK 21(XP22.31) WILD-TYPE" 
                    TCGA-DH-5142                     TCGA-DH-5143 
"DEL PEAK 21(XP22.31) WILD-TYPE" "DEL PEAK 21(XP22.31) WILD-TYPE" 
                    TCGA-DH-5144                     TCGA-DU-5847 
"DEL PEAK 21(XP22.31) WILD-TYPE"   "DEL PEAK 21(XP22.31) MUTATED" 
                    TCGA-DU-5849                     TCGA-DU-5851 
"DEL PEAK 21(XP22.31) WILD-TYPE" "DEL PEAK 21(XP22.31) WILD-TYPE" 
                    TCGA-DU-5852                     TCGA-DU-5853 
"DEL PEAK 21(XP22.31) WILD-TYPE"   "DEL PEAK 21(XP22.31) MUTATED" 
                    TCGA-DU-5854                     TCGA-DU-5855 
"DEL PEAK 21(XP22.31) WILD-TYPE" "DEL PEAK 21(XP22.31) WILD-TYPE" 
                    TCGA-DU-5870                     TCGA-DU-5871 
"DEL PEAK 21(XP22.31) WILD-TYPE"   "DEL PEAK 21(XP22.31) MUTATED" 
                    TCGA-DU-5872                     TCGA-DU-5874 
  "DEL PEAK 21(XP22.31) MUTATED" "DEL PEAK 21(XP22.31) WILD-TYPE" 
                    TCGA-DU-6392                     TCGA-DU-6393 
"DEL PEAK 21(XP22.31) WILD-TYPE" "DEL PEAK 21(XP22.31) WILD-TYPE" 
                    TCGA-DU-6394                     TCGA-DU-6395 
"DEL PEAK 21(XP22.31) WILD-TYPE" "DEL PEAK 21(XP22.31) WILD-TYPE" 
                    TCGA-DU-6396                     TCGA-DU-6397 
"DEL PEAK 21(XP22.31) WILD-TYPE" "DEL PEAK 21(XP22.31) WILD-TYPE" 
                    TCGA-DU-6399                     TCGA-DU-6400 
  "DEL PEAK 21(XP22.31) MUTATED"   "DEL PEAK 21(XP22.31) MUTATED" 
                    TCGA-DU-6401                     TCGA-DU-6402 
  "DEL PEAK 21(XP22.31) MUTATED" "DEL PEAK 21(XP22.31) WILD-TYPE" 
                    TCGA-DU-6403                     TCGA-DU-6404 
"DEL PEAK 21(XP22.31) WILD-TYPE" "DEL PEAK 21(XP22.31) WILD-TYPE" 
                    TCGA-DU-6405                     TCGA-DU-6406 
"DEL PEAK 21(XP22.31) WILD-TYPE" "DEL PEAK 21(XP22.31) WILD-TYPE" 
                    TCGA-DU-6407                     TCGA-DU-6408 
  "DEL PEAK 21(XP22.31) MUTATED" "DEL PEAK 21(XP22.31) WILD-TYPE" 
                    TCGA-DU-6410                     TCGA-DU-6542 
  "DEL PEAK 21(XP22.31) MUTATED"   "DEL PEAK 21(XP22.31) MUTATED" 
                    TCGA-DU-7006                     TCGA-DU-7007 
  "DEL PEAK 21(XP22.31) MUTATED"   "DEL PEAK 21(XP22.31) MUTATED" 
                    TCGA-DU-7008                     TCGA-DU-7009 
  "DEL PEAK 21(XP22.31) MUTATED" "DEL PEAK 21(XP22.31) WILD-TYPE" 
                    TCGA-DU-7010                     TCGA-DU-7011 
"DEL PEAK 21(XP22.31) WILD-TYPE" "DEL PEAK 21(XP22.31) WILD-TYPE" 
                    TCGA-DU-7012                     TCGA-DU-7013 
"DEL PEAK 21(XP22.31) WILD-TYPE" "DEL PEAK 21(XP22.31) WILD-TYPE" 
                    TCGA-DU-7014                     TCGA-DU-7015 
"DEL PEAK 21(XP22.31) WILD-TYPE" "DEL PEAK 21(XP22.31) WILD-TYPE" 
                    TCGA-DU-7018                     TCGA-DU-7019 
  "DEL PEAK 21(XP22.31) MUTATED" "DEL PEAK 21(XP22.31) WILD-TYPE" 
                    TCGA-DU-7290                     TCGA-DU-7292 
"DEL PEAK 21(XP22.31) WILD-TYPE" "DEL PEAK 21(XP22.31) WILD-TYPE" 
                    TCGA-DU-7294                     TCGA-DU-7298 
  "DEL PEAK 21(XP22.31) MUTATED"   "DEL PEAK 21(XP22.31) MUTATED" 
                    TCGA-DU-7299                     TCGA-DU-7300 
"DEL PEAK 21(XP22.31) WILD-TYPE" "DEL PEAK 21(XP22.31) WILD-TYPE" 
                    TCGA-DU-7301                     TCGA-DU-7302 
"DEL PEAK 21(XP22.31) WILD-TYPE"   "DEL PEAK 21(XP22.31) MUTATED" 
                    TCGA-DU-7304                     TCGA-DU-7306 
"DEL PEAK 21(XP22.31) WILD-TYPE" "DEL PEAK 21(XP22.31) WILD-TYPE" 
                    TCGA-DU-7309                     TCGA-E1-5302 
"DEL PEAK 21(XP22.31) WILD-TYPE" "DEL PEAK 21(XP22.31) WILD-TYPE" 
                    TCGA-E1-5303                     TCGA-E1-5304 
"DEL PEAK 21(XP22.31) WILD-TYPE"   "DEL PEAK 21(XP22.31) MUTATED" 
                    TCGA-E1-5305                     TCGA-E1-5307 
  "DEL PEAK 21(XP22.31) MUTATED"   "DEL PEAK 21(XP22.31) MUTATED" 
                    TCGA-E1-5311                     TCGA-E1-5318 
  "DEL PEAK 21(XP22.31) MUTATED" "DEL PEAK 21(XP22.31) WILD-TYPE" 
                    TCGA-E1-5319                     TCGA-E1-5322 
"DEL PEAK 21(XP22.31) WILD-TYPE"   "DEL PEAK 21(XP22.31) MUTATED" 
                    TCGA-EZ-7264                     TCGA-FG-5962 
  "DEL PEAK 21(XP22.31) MUTATED" "DEL PEAK 21(XP22.31) WILD-TYPE" 
                    TCGA-FG-5963                     TCGA-FG-5964 
  "DEL PEAK 21(XP22.31) MUTATED" "DEL PEAK 21(XP22.31) WILD-TYPE" 
                    TCGA-FG-5965                     TCGA-FG-6688 
"DEL PEAK 21(XP22.31) WILD-TYPE" "DEL PEAK 21(XP22.31) WILD-TYPE" 
                    TCGA-FG-6689                     TCGA-FG-6690 
"DEL PEAK 21(XP22.31) WILD-TYPE" "DEL PEAK 21(XP22.31) WILD-TYPE" 
                    TCGA-FG-6691                     TCGA-FG-6692 
"DEL PEAK 21(XP22.31) WILD-TYPE" "DEL PEAK 21(XP22.31) WILD-TYPE" 
                    TCGA-FG-7634                     TCGA-FG-7636 
"DEL PEAK 21(XP22.31) WILD-TYPE"   "DEL PEAK 21(XP22.31) MUTATED" 
                    TCGA-FG-7638                     TCGA-FG-7643 
"DEL PEAK 21(XP22.31) WILD-TYPE" "DEL PEAK 21(XP22.31) WILD-TYPE" 
                    TCGA-FN-7833                     TCGA-HT-7467 
"DEL PEAK 21(XP22.31) WILD-TYPE" "DEL PEAK 21(XP22.31) WILD-TYPE" 
                    TCGA-HT-7468                     TCGA-HT-7470 
"DEL PEAK 21(XP22.31) WILD-TYPE" "DEL PEAK 21(XP22.31) WILD-TYPE" 
                    TCGA-HT-7472                     TCGA-HT-7473 
"DEL PEAK 21(XP22.31) WILD-TYPE" "DEL PEAK 21(XP22.31) WILD-TYPE" 
                    TCGA-HT-7474                     TCGA-HT-7475 
"DEL PEAK 21(XP22.31) WILD-TYPE" "DEL PEAK 21(XP22.31) WILD-TYPE" 
                    TCGA-HT-7476                     TCGA-HT-7478 
  "DEL PEAK 21(XP22.31) MUTATED" "DEL PEAK 21(XP22.31) WILD-TYPE" 
                    TCGA-HT-7479                     TCGA-HT-7480 
"DEL PEAK 21(XP22.31) WILD-TYPE" "DEL PEAK 21(XP22.31) WILD-TYPE" 
                    TCGA-HT-7481                     TCGA-HT-7482 
"DEL PEAK 21(XP22.31) WILD-TYPE" "DEL PEAK 21(XP22.31) WILD-TYPE" 
                    TCGA-HT-7483                     TCGA-HT-7485 
"DEL PEAK 21(XP22.31) WILD-TYPE" "DEL PEAK 21(XP22.31) WILD-TYPE" 
                    TCGA-HT-7601                     TCGA-HT-7602 
"DEL PEAK 21(XP22.31) WILD-TYPE" "DEL PEAK 21(XP22.31) WILD-TYPE" 
                    TCGA-HT-7603                     TCGA-HT-7604 
"DEL PEAK 21(XP22.31) WILD-TYPE"   "DEL PEAK 21(XP22.31) MUTATED" 
                    TCGA-HT-7605                     TCGA-HT-7606 
"DEL PEAK 21(XP22.31) WILD-TYPE" "DEL PEAK 21(XP22.31) WILD-TYPE" 
                    TCGA-HT-7607                     TCGA-HT-7608 
"DEL PEAK 21(XP22.31) WILD-TYPE" "DEL PEAK 21(XP22.31) WILD-TYPE" 
                    TCGA-HT-7609                     TCGA-HT-7610 
  "DEL PEAK 21(XP22.31) MUTATED" "DEL PEAK 21(XP22.31) WILD-TYPE" 
                    TCGA-HW-7486                     TCGA-HW-7487 
"DEL PEAK 21(XP22.31) WILD-TYPE" "DEL PEAK 21(XP22.31) WILD-TYPE" 
                    TCGA-HW-7489                     TCGA-HW-7490 
"DEL PEAK 21(XP22.31) WILD-TYPE" "DEL PEAK 21(XP22.31) WILD-TYPE" 
                    TCGA-HW-7491                     TCGA-HW-7493 
  "DEL PEAK 21(XP22.31) MUTATED" "DEL PEAK 21(XP22.31) WILD-TYPE" 
                    TCGA-HW-7495                     TCGA-IK-7675 
"DEL PEAK 21(XP22.31) WILD-TYPE"   "DEL PEAK 21(XP22.31) MUTATED" 
                    TCGA-IK-8125 
"DEL PEAK 21(XP22.31) WILD-TYPE" 
[1] "hr=" "1"  
D35V2, continuous
D35V3, binary
[1] "tbl2"
                                cls
clus                             [,1] [,2]
  DEL PEAK 21(XP22.31) MUTATED     17   19
  DEL PEAK 21(XP22.31) WILD-TYPE   45   64
        clus
vv       DEL PEAK 21(XP22.31) MUTATED DEL PEAK 21(XP22.31) WILD-TYPE
  FEMALE                           17                             45
  MALE                             19                             64
D35V4, continuous
D35V5, multiclass
                   clus
vv                  DEL PEAK 21(XP22.31) MUTATED DEL PEAK 21(XP22.31) WILD-TYPE
  ASTROCYTOMA                                 13                             37
  OLIGOASTROCYTOMA                             8                             28
  OLIGODENDROGLIOMA                           14                             44
D35V6, binary
[1] "tbl2"
                                cls
clus                             [,1] [,2]
  DEL PEAK 21(XP22.31) MUTATED     13   23
  DEL PEAK 21(XP22.31) WILD-TYPE   46   63
     clus
vv    DEL PEAK 21(XP22.31) MUTATED DEL PEAK 21(XP22.31) WILD-TYPE
  NO                            23                             63
  YES                           13                             46
D35V7, binary
[1] "tbl2"
                                cls
clus                             [,1] [,2]
  DEL PEAK 21(XP22.31) MUTATED     16   20
  DEL PEAK 21(XP22.31) WILD-TYPE   58   51
     clus
vv    DEL PEAK 21(XP22.31) MUTATED DEL PEAK 21(XP22.31) WILD-TYPE
  NO                            20                             51
  YES                           16                             58

Clustering(36) Variable = Del Peak 22(Xq21.1) mutation analysis
D36V1, survival
                   TCGA-CS-4938                    TCGA-CS-4941 
"DEL PEAK 22(XQ21.1) WILD-TYPE" "DEL PEAK 22(XQ21.1) WILD-TYPE" 
                   TCGA-CS-4942                    TCGA-CS-4943 
"DEL PEAK 22(XQ21.1) WILD-TYPE" "DEL PEAK 22(XQ21.1) WILD-TYPE" 
                   TCGA-CS-4944                    TCGA-CS-5390 
"DEL PEAK 22(XQ21.1) WILD-TYPE" "DEL PEAK 22(XQ21.1) WILD-TYPE" 
                   TCGA-CS-5393                    TCGA-CS-5394 
"DEL PEAK 22(XQ21.1) WILD-TYPE" "DEL PEAK 22(XQ21.1) WILD-TYPE" 
                   TCGA-CS-5395                    TCGA-CS-5396 
"DEL PEAK 22(XQ21.1) WILD-TYPE" "DEL PEAK 22(XQ21.1) WILD-TYPE" 
                   TCGA-CS-5397                    TCGA-CS-6186 
"DEL PEAK 22(XQ21.1) WILD-TYPE" "DEL PEAK 22(XQ21.1) WILD-TYPE" 
                   TCGA-CS-6188                    TCGA-CS-6290 
"DEL PEAK 22(XQ21.1) WILD-TYPE" "DEL PEAK 22(XQ21.1) WILD-TYPE" 
                   TCGA-CS-6665                    TCGA-CS-6666 
  "DEL PEAK 22(XQ21.1) MUTATED" "DEL PEAK 22(XQ21.1) WILD-TYPE" 
                   TCGA-CS-6667                    TCGA-CS-6668 
  "DEL PEAK 22(XQ21.1) MUTATED" "DEL PEAK 22(XQ21.1) WILD-TYPE" 
                   TCGA-CS-6669                    TCGA-CS-6670 
"DEL PEAK 22(XQ21.1) WILD-TYPE" "DEL PEAK 22(XQ21.1) WILD-TYPE" 
                   TCGA-DB-5270                    TCGA-DB-5273 
"DEL PEAK 22(XQ21.1) WILD-TYPE" "DEL PEAK 22(XQ21.1) WILD-TYPE" 
                   TCGA-DB-5274                    TCGA-DB-5275 
"DEL PEAK 22(XQ21.1) WILD-TYPE"   "DEL PEAK 22(XQ21.1) MUTATED" 
                   TCGA-DB-5276                    TCGA-DB-5277 
"DEL PEAK 22(XQ21.1) WILD-TYPE"   "DEL PEAK 22(XQ21.1) MUTATED" 
                   TCGA-DB-5278                    TCGA-DB-5279 
"DEL PEAK 22(XQ21.1) WILD-TYPE"   "DEL PEAK 22(XQ21.1) MUTATED" 
                   TCGA-DB-5280                    TCGA-DB-5281 
"DEL PEAK 22(XQ21.1) WILD-TYPE" "DEL PEAK 22(XQ21.1) WILD-TYPE" 
                   TCGA-DH-5140                    TCGA-DH-5141 
  "DEL PEAK 22(XQ21.1) MUTATED" "DEL PEAK 22(XQ21.1) WILD-TYPE" 
                   TCGA-DH-5142                    TCGA-DH-5143 
"DEL PEAK 22(XQ21.1) WILD-TYPE" "DEL PEAK 22(XQ21.1) WILD-TYPE" 
                   TCGA-DH-5144                    TCGA-DU-5847 
"DEL PEAK 22(XQ21.1) WILD-TYPE"   "DEL PEAK 22(XQ21.1) MUTATED" 
                   TCGA-DU-5849                    TCGA-DU-5851 
"DEL PEAK 22(XQ21.1) WILD-TYPE" "DEL PEAK 22(XQ21.1) WILD-TYPE" 
                   TCGA-DU-5852                    TCGA-DU-5853 
"DEL PEAK 22(XQ21.1) WILD-TYPE" "DEL PEAK 22(XQ21.1) WILD-TYPE" 
                   TCGA-DU-5854                    TCGA-DU-5855 
"DEL PEAK 22(XQ21.1) WILD-TYPE" "DEL PEAK 22(XQ21.1) WILD-TYPE" 
                   TCGA-DU-5870                    TCGA-DU-5871 
"DEL PEAK 22(XQ21.1) WILD-TYPE" "DEL PEAK 22(XQ21.1) WILD-TYPE" 
                   TCGA-DU-5872                    TCGA-DU-5874 
"DEL PEAK 22(XQ21.1) WILD-TYPE" "DEL PEAK 22(XQ21.1) WILD-TYPE" 
                   TCGA-DU-6392                    TCGA-DU-6393 
"DEL PEAK 22(XQ21.1) WILD-TYPE" "DEL PEAK 22(XQ21.1) WILD-TYPE" 
                   TCGA-DU-6394                    TCGA-DU-6395 
"DEL PEAK 22(XQ21.1) WILD-TYPE" "DEL PEAK 22(XQ21.1) WILD-TYPE" 
                   TCGA-DU-6396                    TCGA-DU-6397 
"DEL PEAK 22(XQ21.1) WILD-TYPE" "DEL PEAK 22(XQ21.1) WILD-TYPE" 
                   TCGA-DU-6399                    TCGA-DU-6400 
"DEL PEAK 22(XQ21.1) WILD-TYPE" "DEL PEAK 22(XQ21.1) WILD-TYPE" 
                   TCGA-DU-6401                    TCGA-DU-6402 
"DEL PEAK 22(XQ21.1) WILD-TYPE" "DEL PEAK 22(XQ21.1) WILD-TYPE" 
                   TCGA-DU-6403                    TCGA-DU-6404 
"DEL PEAK 22(XQ21.1) WILD-TYPE"   "DEL PEAK 22(XQ21.1) MUTATED" 
                   TCGA-DU-6405                    TCGA-DU-6406 
"DEL PEAK 22(XQ21.1) WILD-TYPE" "DEL PEAK 22(XQ21.1) WILD-TYPE" 
                   TCGA-DU-6407                    TCGA-DU-6408 
"DEL PEAK 22(XQ21.1) WILD-TYPE" "DEL PEAK 22(XQ21.1) WILD-TYPE" 
                   TCGA-DU-6410                    TCGA-DU-6542 
  "DEL PEAK 22(XQ21.1) MUTATED" "DEL PEAK 22(XQ21.1) WILD-TYPE" 
                   TCGA-DU-7006                    TCGA-DU-7007 
  "DEL PEAK 22(XQ21.1) MUTATED" "DEL PEAK 22(XQ21.1) WILD-TYPE" 
                   TCGA-DU-7008                    TCGA-DU-7009 
  "DEL PEAK 22(XQ21.1) MUTATED" "DEL PEAK 22(XQ21.1) WILD-TYPE" 
                   TCGA-DU-7010                    TCGA-DU-7011 
  "DEL PEAK 22(XQ21.1) MUTATED" "DEL PEAK 22(XQ21.1) WILD-TYPE" 
                   TCGA-DU-7012                    TCGA-DU-7013 
"DEL PEAK 22(XQ21.1) WILD-TYPE" "DEL PEAK 22(XQ21.1) WILD-TYPE" 
                   TCGA-DU-7014                    TCGA-DU-7015 
"DEL PEAK 22(XQ21.1) WILD-TYPE" "DEL PEAK 22(XQ21.1) WILD-TYPE" 
                   TCGA-DU-7018                    TCGA-DU-7019 
  "DEL PEAK 22(XQ21.1) MUTATED" "DEL PEAK 22(XQ21.1) WILD-TYPE" 
                   TCGA-DU-7290                    TCGA-DU-7292 
"DEL PEAK 22(XQ21.1) WILD-TYPE" "DEL PEAK 22(XQ21.1) WILD-TYPE" 
                   TCGA-DU-7294                    TCGA-DU-7298 
  "DEL PEAK 22(XQ21.1) MUTATED" "DEL PEAK 22(XQ21.1) WILD-TYPE" 
                   TCGA-DU-7299                    TCGA-DU-7300 
"DEL PEAK 22(XQ21.1) WILD-TYPE" "DEL PEAK 22(XQ21.1) WILD-TYPE" 
                   TCGA-DU-7301                    TCGA-DU-7302 
"DEL PEAK 22(XQ21.1) WILD-TYPE" "DEL PEAK 22(XQ21.1) WILD-TYPE" 
                   TCGA-DU-7304                    TCGA-DU-7306 
"DEL PEAK 22(XQ21.1) WILD-TYPE" "DEL PEAK 22(XQ21.1) WILD-TYPE" 
                   TCGA-DU-7309                    TCGA-E1-5302 
"DEL PEAK 22(XQ21.1) WILD-TYPE"   "DEL PEAK 22(XQ21.1) MUTATED" 
                   TCGA-E1-5303                    TCGA-E1-5304 
"DEL PEAK 22(XQ21.1) WILD-TYPE"   "DEL PEAK 22(XQ21.1) MUTATED" 
                   TCGA-E1-5305                    TCGA-E1-5307 
"DEL PEAK 22(XQ21.1) WILD-TYPE" "DEL PEAK 22(XQ21.1) WILD-TYPE" 
                   TCGA-E1-5311                    TCGA-E1-5318 
  "DEL PEAK 22(XQ21.1) MUTATED" "DEL PEAK 22(XQ21.1) WILD-TYPE" 
                   TCGA-E1-5319                    TCGA-E1-5322 
"DEL PEAK 22(XQ21.1) WILD-TYPE" "DEL PEAK 22(XQ21.1) WILD-TYPE" 
                   TCGA-EZ-7264                    TCGA-FG-5962 
  "DEL PEAK 22(XQ21.1) MUTATED" "DEL PEAK 22(XQ21.1) WILD-TYPE" 
                   TCGA-FG-5963                    TCGA-FG-5964 
"DEL PEAK 22(XQ21.1) WILD-TYPE"   "DEL PEAK 22(XQ21.1) MUTATED" 
                   TCGA-FG-5965                    TCGA-FG-6688 
"DEL PEAK 22(XQ21.1) WILD-TYPE" "DEL PEAK 22(XQ21.1) WILD-TYPE" 
                   TCGA-FG-6689                    TCGA-FG-6690 
"DEL PEAK 22(XQ21.1) WILD-TYPE" "DEL PEAK 22(XQ21.1) WILD-TYPE" 
                   TCGA-FG-6691                    TCGA-FG-6692 
"DEL PEAK 22(XQ21.1) WILD-TYPE" "DEL PEAK 22(XQ21.1) WILD-TYPE" 
                   TCGA-FG-7634                    TCGA-FG-7636 
"DEL PEAK 22(XQ21.1) WILD-TYPE" "DEL PEAK 22(XQ21.1) WILD-TYPE" 
                   TCGA-FG-7638                    TCGA-FG-7643 
"DEL PEAK 22(XQ21.1) WILD-TYPE" "DEL PEAK 22(XQ21.1) WILD-TYPE" 
                   TCGA-FN-7833                    TCGA-HT-7467 
"DEL PEAK 22(XQ21.1) WILD-TYPE" "DEL PEAK 22(XQ21.1) WILD-TYPE" 
                   TCGA-HT-7468                    TCGA-HT-7470 
"DEL PEAK 22(XQ21.1) WILD-TYPE" "DEL PEAK 22(XQ21.1) WILD-TYPE" 
                   TCGA-HT-7472                    TCGA-HT-7473 
"DEL PEAK 22(XQ21.1) WILD-TYPE" "DEL PEAK 22(XQ21.1) WILD-TYPE" 
                   TCGA-HT-7474                    TCGA-HT-7475 
"DEL PEAK 22(XQ21.1) WILD-TYPE" "DEL PEAK 22(XQ21.1) WILD-TYPE" 
                   TCGA-HT-7476                    TCGA-HT-7478 
"DEL PEAK 22(XQ21.1) WILD-TYPE" "DEL PEAK 22(XQ21.1) WILD-TYPE" 
                   TCGA-HT-7479                    TCGA-HT-7480 
"DEL PEAK 22(XQ21.1) WILD-TYPE" "DEL PEAK 22(XQ21.1) WILD-TYPE" 
                   TCGA-HT-7481                    TCGA-HT-7482 
"DEL PEAK 22(XQ21.1) WILD-TYPE" "DEL PEAK 22(XQ21.1) WILD-TYPE" 
                   TCGA-HT-7483                    TCGA-HT-7485 
"DEL PEAK 22(XQ21.1) WILD-TYPE" "DEL PEAK 22(XQ21.1) WILD-TYPE" 
                   TCGA-HT-7601                    TCGA-HT-7602 
"DEL PEAK 22(XQ21.1) WILD-TYPE" "DEL PEAK 22(XQ21.1) WILD-TYPE" 
                   TCGA-HT-7603                    TCGA-HT-7604 
"DEL PEAK 22(XQ21.1) WILD-TYPE" "DEL PEAK 22(XQ21.1) WILD-TYPE" 
                   TCGA-HT-7605                    TCGA-HT-7606 
"DEL PEAK 22(XQ21.1) WILD-TYPE" "DEL PEAK 22(XQ21.1) WILD-TYPE" 
                   TCGA-HT-7607                    TCGA-HT-7608 
"DEL PEAK 22(XQ21.1) WILD-TYPE" "DEL PEAK 22(XQ21.1) WILD-TYPE" 
                   TCGA-HT-7609                    TCGA-HT-7610 
"DEL PEAK 22(XQ21.1) WILD-TYPE" "DEL PEAK 22(XQ21.1) WILD-TYPE" 
                   TCGA-HW-7486                    TCGA-HW-7487 
"DEL PEAK 22(XQ21.1) WILD-TYPE" "DEL PEAK 22(XQ21.1) WILD-TYPE" 
                   TCGA-HW-7489                    TCGA-HW-7490 
"DEL PEAK 22(XQ21.1) WILD-TYPE" "DEL PEAK 22(XQ21.1) WILD-TYPE" 
                   TCGA-HW-7491                    TCGA-HW-7493 
  "DEL PEAK 22(XQ21.1) MUTATED" "DEL PEAK 22(XQ21.1) WILD-TYPE" 
                   TCGA-HW-7495                    TCGA-IK-7675 
"DEL PEAK 22(XQ21.1) WILD-TYPE"   "DEL PEAK 22(XQ21.1) MUTATED" 
                   TCGA-IK-8125 
"DEL PEAK 22(XQ21.1) WILD-TYPE" 
                   TCGA-CS-4938                    TCGA-CS-4941 
"DEL PEAK 22(XQ21.1) WILD-TYPE" "DEL PEAK 22(XQ21.1) WILD-TYPE" 
                   TCGA-CS-4942                    TCGA-CS-4943 
"DEL PEAK 22(XQ21.1) WILD-TYPE" "DEL PEAK 22(XQ21.1) WILD-TYPE" 
                   TCGA-CS-4944                    TCGA-CS-5390 
"DEL PEAK 22(XQ21.1) WILD-TYPE" "DEL PEAK 22(XQ21.1) WILD-TYPE" 
                   TCGA-CS-5393                    TCGA-CS-5394 
"DEL PEAK 22(XQ21.1) WILD-TYPE" "DEL PEAK 22(XQ21.1) WILD-TYPE" 
                   TCGA-CS-5395                    TCGA-CS-5396 
"DEL PEAK 22(XQ21.1) WILD-TYPE" "DEL PEAK 22(XQ21.1) WILD-TYPE" 
                   TCGA-CS-5397                    TCGA-CS-6186 
"DEL PEAK 22(XQ21.1) WILD-TYPE" "DEL PEAK 22(XQ21.1) WILD-TYPE" 
                   TCGA-CS-6188                    TCGA-CS-6290 
"DEL PEAK 22(XQ21.1) WILD-TYPE" "DEL PEAK 22(XQ21.1) WILD-TYPE" 
                   TCGA-CS-6665                    TCGA-CS-6666 
  "DEL PEAK 22(XQ21.1) MUTATED" "DEL PEAK 22(XQ21.1) WILD-TYPE" 
                   TCGA-CS-6667                    TCGA-CS-6668 
  "DEL PEAK 22(XQ21.1) MUTATED" "DEL PEAK 22(XQ21.1) WILD-TYPE" 
                   TCGA-CS-6669                    TCGA-CS-6670 
"DEL PEAK 22(XQ21.1) WILD-TYPE" "DEL PEAK 22(XQ21.1) WILD-TYPE" 
                   TCGA-DB-5270                    TCGA-DB-5273 
"DEL PEAK 22(XQ21.1) WILD-TYPE" "DEL PEAK 22(XQ21.1) WILD-TYPE" 
                   TCGA-DB-5274                    TCGA-DB-5275 
"DEL PEAK 22(XQ21.1) WILD-TYPE"   "DEL PEAK 22(XQ21.1) MUTATED" 
                   TCGA-DB-5276                    TCGA-DB-5277 
"DEL PEAK 22(XQ21.1) WILD-TYPE"   "DEL PEAK 22(XQ21.1) MUTATED" 
                   TCGA-DB-5278                    TCGA-DB-5279 
"DEL PEAK 22(XQ21.1) WILD-TYPE"   "DEL PEAK 22(XQ21.1) MUTATED" 
                   TCGA-DB-5280                    TCGA-DB-5281 
"DEL PEAK 22(XQ21.1) WILD-TYPE" "DEL PEAK 22(XQ21.1) WILD-TYPE" 
                   TCGA-DH-5140                    TCGA-DH-5141 
  "DEL PEAK 22(XQ21.1) MUTATED" "DEL PEAK 22(XQ21.1) WILD-TYPE" 
                   TCGA-DH-5142                    TCGA-DH-5143 
"DEL PEAK 22(XQ21.1) WILD-TYPE" "DEL PEAK 22(XQ21.1) WILD-TYPE" 
                   TCGA-DH-5144                    TCGA-DU-5847 
"DEL PEAK 22(XQ21.1) WILD-TYPE"   "DEL PEAK 22(XQ21.1) MUTATED" 
                   TCGA-DU-5849                    TCGA-DU-5851 
"DEL PEAK 22(XQ21.1) WILD-TYPE" "DEL PEAK 22(XQ21.1) WILD-TYPE" 
                   TCGA-DU-5852                    TCGA-DU-5853 
"DEL PEAK 22(XQ21.1) WILD-TYPE" "DEL PEAK 22(XQ21.1) WILD-TYPE" 
                   TCGA-DU-5854                    TCGA-DU-5855 
"DEL PEAK 22(XQ21.1) WILD-TYPE" "DEL PEAK 22(XQ21.1) WILD-TYPE" 
                   TCGA-DU-5870                    TCGA-DU-5871 
"DEL PEAK 22(XQ21.1) WILD-TYPE" "DEL PEAK 22(XQ21.1) WILD-TYPE" 
                   TCGA-DU-5872                    TCGA-DU-5874 
"DEL PEAK 22(XQ21.1) WILD-TYPE" "DEL PEAK 22(XQ21.1) WILD-TYPE" 
                   TCGA-DU-6392                    TCGA-DU-6393 
"DEL PEAK 22(XQ21.1) WILD-TYPE" "DEL PEAK 22(XQ21.1) WILD-TYPE" 
                   TCGA-DU-6394                    TCGA-DU-6395 
"DEL PEAK 22(XQ21.1) WILD-TYPE" "DEL PEAK 22(XQ21.1) WILD-TYPE" 
                   TCGA-DU-6396                    TCGA-DU-6397 
"DEL PEAK 22(XQ21.1) WILD-TYPE" "DEL PEAK 22(XQ21.1) WILD-TYPE" 
                   TCGA-DU-6399                    TCGA-DU-6400 
"DEL PEAK 22(XQ21.1) WILD-TYPE" "DEL PEAK 22(XQ21.1) WILD-TYPE" 
                   TCGA-DU-6401                    TCGA-DU-6402 
"DEL PEAK 22(XQ21.1) WILD-TYPE" "DEL PEAK 22(XQ21.1) WILD-TYPE" 
                   TCGA-DU-6403                    TCGA-DU-6404 
"DEL PEAK 22(XQ21.1) WILD-TYPE"   "DEL PEAK 22(XQ21.1) MUTATED" 
                   TCGA-DU-6405                    TCGA-DU-6406 
"DEL PEAK 22(XQ21.1) WILD-TYPE" "DEL PEAK 22(XQ21.1) WILD-TYPE" 
                   TCGA-DU-6407                    TCGA-DU-6408 
"DEL PEAK 22(XQ21.1) WILD-TYPE" "DEL PEAK 22(XQ21.1) WILD-TYPE" 
                   TCGA-DU-6410                    TCGA-DU-6542 
  "DEL PEAK 22(XQ21.1) MUTATED" "DEL PEAK 22(XQ21.1) WILD-TYPE" 
                   TCGA-DU-7006                    TCGA-DU-7007 
  "DEL PEAK 22(XQ21.1) MUTATED" "DEL PEAK 22(XQ21.1) WILD-TYPE" 
                   TCGA-DU-7008                    TCGA-DU-7009 
  "DEL PEAK 22(XQ21.1) MUTATED" "DEL PEAK 22(XQ21.1) WILD-TYPE" 
                   TCGA-DU-7010                    TCGA-DU-7011 
  "DEL PEAK 22(XQ21.1) MUTATED" "DEL PEAK 22(XQ21.1) WILD-TYPE" 
                   TCGA-DU-7012                    TCGA-DU-7013 
"DEL PEAK 22(XQ21.1) WILD-TYPE" "DEL PEAK 22(XQ21.1) WILD-TYPE" 
                   TCGA-DU-7014                    TCGA-DU-7015 
"DEL PEAK 22(XQ21.1) WILD-TYPE" "DEL PEAK 22(XQ21.1) WILD-TYPE" 
                   TCGA-DU-7018                    TCGA-DU-7019 
  "DEL PEAK 22(XQ21.1) MUTATED" "DEL PEAK 22(XQ21.1) WILD-TYPE" 
                   TCGA-DU-7290                    TCGA-DU-7292 
"DEL PEAK 22(XQ21.1) WILD-TYPE" "DEL PEAK 22(XQ21.1) WILD-TYPE" 
                   TCGA-DU-7294                    TCGA-DU-7298 
  "DEL PEAK 22(XQ21.1) MUTATED" "DEL PEAK 22(XQ21.1) WILD-TYPE" 
                   TCGA-DU-7299                    TCGA-DU-7300 
"DEL PEAK 22(XQ21.1) WILD-TYPE" "DEL PEAK 22(XQ21.1) WILD-TYPE" 
                   TCGA-DU-7301                    TCGA-DU-7302 
"DEL PEAK 22(XQ21.1) WILD-TYPE" "DEL PEAK 22(XQ21.1) WILD-TYPE" 
                   TCGA-DU-7304                    TCGA-DU-7306 
"DEL PEAK 22(XQ21.1) WILD-TYPE" "DEL PEAK 22(XQ21.1) WILD-TYPE" 
                   TCGA-DU-7309                    TCGA-E1-5302 
"DEL PEAK 22(XQ21.1) WILD-TYPE"   "DEL PEAK 22(XQ21.1) MUTATED" 
                   TCGA-E1-5303                    TCGA-E1-5304 
"DEL PEAK 22(XQ21.1) WILD-TYPE"   "DEL PEAK 22(XQ21.1) MUTATED" 
                   TCGA-E1-5305                    TCGA-E1-5307 
"DEL PEAK 22(XQ21.1) WILD-TYPE" "DEL PEAK 22(XQ21.1) WILD-TYPE" 
                   TCGA-E1-5311                    TCGA-E1-5318 
  "DEL PEAK 22(XQ21.1) MUTATED" "DEL PEAK 22(XQ21.1) WILD-TYPE" 
                   TCGA-E1-5319                    TCGA-E1-5322 
"DEL PEAK 22(XQ21.1) WILD-TYPE" "DEL PEAK 22(XQ21.1) WILD-TYPE" 
                   TCGA-EZ-7264                    TCGA-FG-5962 
  "DEL PEAK 22(XQ21.1) MUTATED" "DEL PEAK 22(XQ21.1) WILD-TYPE" 
                   TCGA-FG-5963                    TCGA-FG-5964 
"DEL PEAK 22(XQ21.1) WILD-TYPE"   "DEL PEAK 22(XQ21.1) MUTATED" 
                   TCGA-FG-5965                    TCGA-FG-6688 
"DEL PEAK 22(XQ21.1) WILD-TYPE" "DEL PEAK 22(XQ21.1) WILD-TYPE" 
                   TCGA-FG-6689                    TCGA-FG-6690 
"DEL PEAK 22(XQ21.1) WILD-TYPE" "DEL PEAK 22(XQ21.1) WILD-TYPE" 
                   TCGA-FG-6691                    TCGA-FG-6692 
"DEL PEAK 22(XQ21.1) WILD-TYPE" "DEL PEAK 22(XQ21.1) WILD-TYPE" 
                   TCGA-FG-7634                    TCGA-FG-7636 
"DEL PEAK 22(XQ21.1) WILD-TYPE" "DEL PEAK 22(XQ21.1) WILD-TYPE" 
                   TCGA-FG-7638                    TCGA-FG-7643 
"DEL PEAK 22(XQ21.1) WILD-TYPE" "DEL PEAK 22(XQ21.1) WILD-TYPE" 
                   TCGA-FN-7833                    TCGA-HT-7467 
"DEL PEAK 22(XQ21.1) WILD-TYPE" "DEL PEAK 22(XQ21.1) WILD-TYPE" 
                   TCGA-HT-7468                    TCGA-HT-7470 
"DEL PEAK 22(XQ21.1) WILD-TYPE" "DEL PEAK 22(XQ21.1) WILD-TYPE" 
                   TCGA-HT-7472                    TCGA-HT-7473 
"DEL PEAK 22(XQ21.1) WILD-TYPE" "DEL PEAK 22(XQ21.1) WILD-TYPE" 
                   TCGA-HT-7474                    TCGA-HT-7475 
"DEL PEAK 22(XQ21.1) WILD-TYPE" "DEL PEAK 22(XQ21.1) WILD-TYPE" 
                   TCGA-HT-7476                    TCGA-HT-7478 
"DEL PEAK 22(XQ21.1) WILD-TYPE" "DEL PEAK 22(XQ21.1) WILD-TYPE" 
                   TCGA-HT-7479                    TCGA-HT-7480 
"DEL PEAK 22(XQ21.1) WILD-TYPE" "DEL PEAK 22(XQ21.1) WILD-TYPE" 
                   TCGA-HT-7481                    TCGA-HT-7482 
"DEL PEAK 22(XQ21.1) WILD-TYPE" "DEL PEAK 22(XQ21.1) WILD-TYPE" 
                   TCGA-HT-7483                    TCGA-HT-7485 
"DEL PEAK 22(XQ21.1) WILD-TYPE" "DEL PEAK 22(XQ21.1) WILD-TYPE" 
                   TCGA-HT-7601                    TCGA-HT-7602 
"DEL PEAK 22(XQ21.1) WILD-TYPE" "DEL PEAK 22(XQ21.1) WILD-TYPE" 
                   TCGA-HT-7603                    TCGA-HT-7604 
"DEL PEAK 22(XQ21.1) WILD-TYPE" "DEL PEAK 22(XQ21.1) WILD-TYPE" 
                   TCGA-HT-7605                    TCGA-HT-7606 
"DEL PEAK 22(XQ21.1) WILD-TYPE" "DEL PEAK 22(XQ21.1) WILD-TYPE" 
                   TCGA-HT-7607                    TCGA-HT-7608 
"DEL PEAK 22(XQ21.1) WILD-TYPE" "DEL PEAK 22(XQ21.1) WILD-TYPE" 
                   TCGA-HT-7609                    TCGA-HT-7610 
"DEL PEAK 22(XQ21.1) WILD-TYPE" "DEL PEAK 22(XQ21.1) WILD-TYPE" 
                   TCGA-HW-7486                    TCGA-HW-7487 
"DEL PEAK 22(XQ21.1) WILD-TYPE" "DEL PEAK 22(XQ21.1) WILD-TYPE" 
                   TCGA-HW-7489                    TCGA-HW-7490 
"DEL PEAK 22(XQ21.1) WILD-TYPE" "DEL PEAK 22(XQ21.1) WILD-TYPE" 
                   TCGA-HW-7491                    TCGA-HW-7493 
  "DEL PEAK 22(XQ21.1) MUTATED" "DEL PEAK 22(XQ21.1) WILD-TYPE" 
                   TCGA-HW-7495                    TCGA-IK-7675 
"DEL PEAK 22(XQ21.1) WILD-TYPE"   "DEL PEAK 22(XQ21.1) MUTATED" 
                   TCGA-IK-8125 
"DEL PEAK 22(XQ21.1) WILD-TYPE" 
                   TCGA-CS-4938                    TCGA-CS-4941 
"DEL PEAK 22(XQ21.1) WILD-TYPE" "DEL PEAK 22(XQ21.1) WILD-TYPE" 
                   TCGA-CS-4942                    TCGA-CS-4943 
"DEL PEAK 22(XQ21.1) WILD-TYPE" "DEL PEAK 22(XQ21.1) WILD-TYPE" 
                   TCGA-CS-4944                    TCGA-CS-5390 
"DEL PEAK 22(XQ21.1) WILD-TYPE" "DEL PEAK 22(XQ21.1) WILD-TYPE" 
                   TCGA-CS-5393                    TCGA-CS-5394 
"DEL PEAK 22(XQ21.1) WILD-TYPE" "DEL PEAK 22(XQ21.1) WILD-TYPE" 
                   TCGA-CS-5395                    TCGA-CS-5396 
"DEL PEAK 22(XQ21.1) WILD-TYPE" "DEL PEAK 22(XQ21.1) WILD-TYPE" 
                   TCGA-CS-5397                    TCGA-CS-6186 
"DEL PEAK 22(XQ21.1) WILD-TYPE" "DEL PEAK 22(XQ21.1) WILD-TYPE" 
                   TCGA-CS-6188                    TCGA-CS-6290 
"DEL PEAK 22(XQ21.1) WILD-TYPE" "DEL PEAK 22(XQ21.1) WILD-TYPE" 
                   TCGA-CS-6665                    TCGA-CS-6666 
  "DEL PEAK 22(XQ21.1) MUTATED" "DEL PEAK 22(XQ21.1) WILD-TYPE" 
                   TCGA-CS-6667                    TCGA-CS-6668 
  "DEL PEAK 22(XQ21.1) MUTATED" "DEL PEAK 22(XQ21.1) WILD-TYPE" 
                   TCGA-CS-6669                    TCGA-CS-6670 
"DEL PEAK 22(XQ21.1) WILD-TYPE" "DEL PEAK 22(XQ21.1) WILD-TYPE" 
                   TCGA-DB-5270                    TCGA-DB-5273 
"DEL PEAK 22(XQ21.1) WILD-TYPE" "DEL PEAK 22(XQ21.1) WILD-TYPE" 
                   TCGA-DB-5274                    TCGA-DB-5275 
"DEL PEAK 22(XQ21.1) WILD-TYPE"   "DEL PEAK 22(XQ21.1) MUTATED" 
                   TCGA-DB-5276                    TCGA-DB-5277 
"DEL PEAK 22(XQ21.1) WILD-TYPE"   "DEL PEAK 22(XQ21.1) MUTATED" 
                   TCGA-DB-5278                    TCGA-DB-5279 
"DEL PEAK 22(XQ21.1) WILD-TYPE"   "DEL PEAK 22(XQ21.1) MUTATED" 
                   TCGA-DB-5280                    TCGA-DB-5281 
"DEL PEAK 22(XQ21.1) WILD-TYPE" "DEL PEAK 22(XQ21.1) WILD-TYPE" 
                   TCGA-DH-5140                    TCGA-DH-5141 
  "DEL PEAK 22(XQ21.1) MUTATED" "DEL PEAK 22(XQ21.1) WILD-TYPE" 
                   TCGA-DH-5142                    TCGA-DH-5143 
"DEL PEAK 22(XQ21.1) WILD-TYPE" "DEL PEAK 22(XQ21.1) WILD-TYPE" 
                   TCGA-DH-5144                    TCGA-DU-5847 
"DEL PEAK 22(XQ21.1) WILD-TYPE"   "DEL PEAK 22(XQ21.1) MUTATED" 
                   TCGA-DU-5849                    TCGA-DU-5851 
"DEL PEAK 22(XQ21.1) WILD-TYPE" "DEL PEAK 22(XQ21.1) WILD-TYPE" 
                   TCGA-DU-5852                    TCGA-DU-5853 
"DEL PEAK 22(XQ21.1) WILD-TYPE" "DEL PEAK 22(XQ21.1) WILD-TYPE" 
                   TCGA-DU-5854                    TCGA-DU-5855 
"DEL PEAK 22(XQ21.1) WILD-TYPE" "DEL PEAK 22(XQ21.1) WILD-TYPE" 
                   TCGA-DU-5870                    TCGA-DU-5871 
"DEL PEAK 22(XQ21.1) WILD-TYPE" "DEL PEAK 22(XQ21.1) WILD-TYPE" 
                   TCGA-DU-5872                    TCGA-DU-5874 
"DEL PEAK 22(XQ21.1) WILD-TYPE" "DEL PEAK 22(XQ21.1) WILD-TYPE" 
                   TCGA-DU-6392                    TCGA-DU-6393 
"DEL PEAK 22(XQ21.1) WILD-TYPE" "DEL PEAK 22(XQ21.1) WILD-TYPE" 
                   TCGA-DU-6394                    TCGA-DU-6395 
"DEL PEAK 22(XQ21.1) WILD-TYPE" "DEL PEAK 22(XQ21.1) WILD-TYPE" 
                   TCGA-DU-6396                    TCGA-DU-6397 
"DEL PEAK 22(XQ21.1) WILD-TYPE" "DEL PEAK 22(XQ21.1) WILD-TYPE" 
                   TCGA-DU-6399                    TCGA-DU-6400 
"DEL PEAK 22(XQ21.1) WILD-TYPE" "DEL PEAK 22(XQ21.1) WILD-TYPE" 
                   TCGA-DU-6401                    TCGA-DU-6402 
"DEL PEAK 22(XQ21.1) WILD-TYPE" "DEL PEAK 22(XQ21.1) WILD-TYPE" 
                   TCGA-DU-6403                    TCGA-DU-6404 
"DEL PEAK 22(XQ21.1) WILD-TYPE"   "DEL PEAK 22(XQ21.1) MUTATED" 
                   TCGA-DU-6405                    TCGA-DU-6406 
"DEL PEAK 22(XQ21.1) WILD-TYPE" "DEL PEAK 22(XQ21.1) WILD-TYPE" 
                   TCGA-DU-6407                    TCGA-DU-6408 
"DEL PEAK 22(XQ21.1) WILD-TYPE" "DEL PEAK 22(XQ21.1) WILD-TYPE" 
                   TCGA-DU-6410                    TCGA-DU-6542 
  "DEL PEAK 22(XQ21.1) MUTATED" "DEL PEAK 22(XQ21.1) WILD-TYPE" 
                   TCGA-DU-7006                    TCGA-DU-7007 
  "DEL PEAK 22(XQ21.1) MUTATED" "DEL PEAK 22(XQ21.1) WILD-TYPE" 
                   TCGA-DU-7008                    TCGA-DU-7009 
  "DEL PEAK 22(XQ21.1) MUTATED" "DEL PEAK 22(XQ21.1) WILD-TYPE" 
                   TCGA-DU-7010                    TCGA-DU-7011 
  "DEL PEAK 22(XQ21.1) MUTATED" "DEL PEAK 22(XQ21.1) WILD-TYPE" 
                   TCGA-DU-7012                    TCGA-DU-7013 
"DEL PEAK 22(XQ21.1) WILD-TYPE" "DEL PEAK 22(XQ21.1) WILD-TYPE" 
                   TCGA-DU-7014                    TCGA-DU-7015 
"DEL PEAK 22(XQ21.1) WILD-TYPE" "DEL PEAK 22(XQ21.1) WILD-TYPE" 
                   TCGA-DU-7018                    TCGA-DU-7019 
  "DEL PEAK 22(XQ21.1) MUTATED" "DEL PEAK 22(XQ21.1) WILD-TYPE" 
                   TCGA-DU-7290                    TCGA-DU-7292 
"DEL PEAK 22(XQ21.1) WILD-TYPE" "DEL PEAK 22(XQ21.1) WILD-TYPE" 
                   TCGA-DU-7294                    TCGA-DU-7298 
  "DEL PEAK 22(XQ21.1) MUTATED" "DEL PEAK 22(XQ21.1) WILD-TYPE" 
                   TCGA-DU-7299                    TCGA-DU-7300 
"DEL PEAK 22(XQ21.1) WILD-TYPE" "DEL PEAK 22(XQ21.1) WILD-TYPE" 
                   TCGA-DU-7301                    TCGA-DU-7302 
"DEL PEAK 22(XQ21.1) WILD-TYPE" "DEL PEAK 22(XQ21.1) WILD-TYPE" 
                   TCGA-DU-7304                    TCGA-DU-7306 
"DEL PEAK 22(XQ21.1) WILD-TYPE" "DEL PEAK 22(XQ21.1) WILD-TYPE" 
                   TCGA-DU-7309                    TCGA-E1-5302 
"DEL PEAK 22(XQ21.1) WILD-TYPE"   "DEL PEAK 22(XQ21.1) MUTATED" 
                   TCGA-E1-5303                    TCGA-E1-5304 
"DEL PEAK 22(XQ21.1) WILD-TYPE"   "DEL PEAK 22(XQ21.1) MUTATED" 
                   TCGA-E1-5305                    TCGA-E1-5307 
"DEL PEAK 22(XQ21.1) WILD-TYPE" "DEL PEAK 22(XQ21.1) WILD-TYPE" 
                   TCGA-E1-5311                    TCGA-E1-5318 
  "DEL PEAK 22(XQ21.1) MUTATED" "DEL PEAK 22(XQ21.1) WILD-TYPE" 
                   TCGA-E1-5319                    TCGA-E1-5322 
"DEL PEAK 22(XQ21.1) WILD-TYPE" "DEL PEAK 22(XQ21.1) WILD-TYPE" 
                   TCGA-EZ-7264                    TCGA-FG-5962 
  "DEL PEAK 22(XQ21.1) MUTATED" "DEL PEAK 22(XQ21.1) WILD-TYPE" 
                   TCGA-FG-5963                    TCGA-FG-5964 
"DEL PEAK 22(XQ21.1) WILD-TYPE"   "DEL PEAK 22(XQ21.1) MUTATED" 
                   TCGA-FG-5965                    TCGA-FG-6688 
"DEL PEAK 22(XQ21.1) WILD-TYPE" "DEL PEAK 22(XQ21.1) WILD-TYPE" 
                   TCGA-FG-6689                    TCGA-FG-6690 
"DEL PEAK 22(XQ21.1) WILD-TYPE" "DEL PEAK 22(XQ21.1) WILD-TYPE" 
                   TCGA-FG-6691                    TCGA-FG-6692 
"DEL PEAK 22(XQ21.1) WILD-TYPE" "DEL PEAK 22(XQ21.1) WILD-TYPE" 
                   TCGA-FG-7634                    TCGA-FG-7636 
"DEL PEAK 22(XQ21.1) WILD-TYPE" "DEL PEAK 22(XQ21.1) WILD-TYPE" 
                   TCGA-FG-7638                    TCGA-FG-7643 
"DEL PEAK 22(XQ21.1) WILD-TYPE" "DEL PEAK 22(XQ21.1) WILD-TYPE" 
                   TCGA-FN-7833                    TCGA-HT-7467 
"DEL PEAK 22(XQ21.1) WILD-TYPE" "DEL PEAK 22(XQ21.1) WILD-TYPE" 
                   TCGA-HT-7468                    TCGA-HT-7470 
"DEL PEAK 22(XQ21.1) WILD-TYPE" "DEL PEAK 22(XQ21.1) WILD-TYPE" 
                   TCGA-HT-7472                    TCGA-HT-7473 
"DEL PEAK 22(XQ21.1) WILD-TYPE" "DEL PEAK 22(XQ21.1) WILD-TYPE" 
                   TCGA-HT-7474                    TCGA-HT-7475 
"DEL PEAK 22(XQ21.1) WILD-TYPE" "DEL PEAK 22(XQ21.1) WILD-TYPE" 
                   TCGA-HT-7476                    TCGA-HT-7478 
"DEL PEAK 22(XQ21.1) WILD-TYPE" "DEL PEAK 22(XQ21.1) WILD-TYPE" 
                   TCGA-HT-7479                    TCGA-HT-7480 
"DEL PEAK 22(XQ21.1) WILD-TYPE" "DEL PEAK 22(XQ21.1) WILD-TYPE" 
                   TCGA-HT-7481                    TCGA-HT-7482 
"DEL PEAK 22(XQ21.1) WILD-TYPE" "DEL PEAK 22(XQ21.1) WILD-TYPE" 
                   TCGA-HT-7483                    TCGA-HT-7485 
"DEL PEAK 22(XQ21.1) WILD-TYPE" "DEL PEAK 22(XQ21.1) WILD-TYPE" 
                   TCGA-HT-7601                    TCGA-HT-7602 
"DEL PEAK 22(XQ21.1) WILD-TYPE" "DEL PEAK 22(XQ21.1) WILD-TYPE" 
                   TCGA-HT-7603                    TCGA-HT-7604 
"DEL PEAK 22(XQ21.1) WILD-TYPE" "DEL PEAK 22(XQ21.1) WILD-TYPE" 
                   TCGA-HT-7605                    TCGA-HT-7606 
"DEL PEAK 22(XQ21.1) WILD-TYPE" "DEL PEAK 22(XQ21.1) WILD-TYPE" 
                   TCGA-HT-7607                    TCGA-HT-7608 
"DEL PEAK 22(XQ21.1) WILD-TYPE" "DEL PEAK 22(XQ21.1) WILD-TYPE" 
                   TCGA-HT-7609                    TCGA-HT-7610 
"DEL PEAK 22(XQ21.1) WILD-TYPE" "DEL PEAK 22(XQ21.1) WILD-TYPE" 
                   TCGA-HW-7486                    TCGA-HW-7487 
"DEL PEAK 22(XQ21.1) WILD-TYPE" "DEL PEAK 22(XQ21.1) WILD-TYPE" 
                   TCGA-HW-7489                    TCGA-HW-7490 
"DEL PEAK 22(XQ21.1) WILD-TYPE" "DEL PEAK 22(XQ21.1) WILD-TYPE" 
                   TCGA-HW-7491                    TCGA-HW-7493 
  "DEL PEAK 22(XQ21.1) MUTATED" "DEL PEAK 22(XQ21.1) WILD-TYPE" 
                   TCGA-HW-7495                    TCGA-IK-7675 
"DEL PEAK 22(XQ21.1) WILD-TYPE"   "DEL PEAK 22(XQ21.1) MUTATED" 
                   TCGA-IK-8125 
"DEL PEAK 22(XQ21.1) WILD-TYPE" 
[1] "hr=" "1.1"
D36V2, continuous
D36V3, binary
[1] "tbl2"
                               cls
clus                            [,1] [,2]
  DEL PEAK 22(XQ21.1) MUTATED     11   10
  DEL PEAK 22(XQ21.1) WILD-TYPE   51   73
        clus
vv       DEL PEAK 22(XQ21.1) MUTATED DEL PEAK 22(XQ21.1) WILD-TYPE
  FEMALE                          11                            51
  MALE                            10                            73
D36V4, continuous
D36V5, multiclass
                   clus
vv                  DEL PEAK 22(XQ21.1) MUTATED DEL PEAK 22(XQ21.1) WILD-TYPE
  ASTROCYTOMA                                 8                            42
  OLIGOASTROCYTOMA                            2                            34
  OLIGODENDROGLIOMA                          11                            47
D36V6, binary
[1] "tbl2"
                               cls
clus                            [,1] [,2]
  DEL PEAK 22(XQ21.1) MUTATED     10   11
  DEL PEAK 22(XQ21.1) WILD-TYPE   49   75
     clus
vv    DEL PEAK 22(XQ21.1) MUTATED DEL PEAK 22(XQ21.1) WILD-TYPE
  NO                           11                            75
  YES                          10                            49
D36V7, binary
[1] "tbl2"
                               cls
clus                            [,1] [,2]
  DEL PEAK 22(XQ21.1) MUTATED     10   11
  DEL PEAK 22(XQ21.1) WILD-TYPE   64   60
     clus
vv    DEL PEAK 22(XQ21.1) MUTATED DEL PEAK 22(XQ21.1) WILD-TYPE
  NO                           11                            60
  YES                          10                            64
                                    V1.D 
                         "Time to Death" 
                                      V2 
                                   "AGE" 
                                      V3 
                                "GENDER" 
                                      V4 
           "KARNOFSKY.PERFORMANCE.SCORE" 
                                      V5 
                     "HISTOLOGICAL.TYPE" 
                                      V6 
"RADIATIONS.RADIATION.REGIMENINDICATION" 
                                      V7 
                   "NEOADJUVANT.THERAPY" 
> q(save="no")
