patient	chr	start	end	type	gene	Protein_Change	n_cos
LUSC-34-2600	4	1803568	1803568	Missense_Mutation	FGFR3	p.S249C	1039
LUSC-66-2770	4	1803568	1803568	Missense_Mutation	FGFR3	p.S249C	1039
LUSC-33-4586	17	7577538	7577538	Missense_Mutation	TP53	p.R248Q	1009
LUSC-46-3768	17	7577538	7577538	Missense_Mutation	TP53	p.R248P	1009
LUSC-66-2777	17	7577538	7577538	Missense_Mutation	TP53	p.R248L	1009
LUSC-22-5471	17	7577539	7577539	Missense_Mutation	TP53	p.R248W	986
LUSC-21-5782	3	178952085	178952085	Missense_Mutation	PIK3CA	p.H1047R	977
LUSC-37-3783	3	178952085	178952085	Missense_Mutation	PIK3CA	p.H1047R	977
LUSC-18-3414	17	7577120	7577120	Missense_Mutation	TP53	p.R273L	890
LUSC-37-3783	17	7577120	7577120	Missense_Mutation	TP53	p.R273H	890
LUSC-43-5668	17	7577120	7577120	Missense_Mutation	TP53	p.R273L	890
LUSC-51-4081	17	7577120	7577120	Missense_Mutation	TP53	p.R273L	890
LUSC-66-2755	17	7577120	7577120	Missense_Mutation	TP53	p.R273P	890
LUSC-22-4601	17	7577121	7577121	Missense_Mutation	TP53	p.R273C	876
LUSC-33-4583	17	7577536	7577536	Missense_Mutation	TP53	p.R249W	866
LUSC-66-2759	17	7577536	7577536	Missense_Mutation	TP53	p.R249G	866
LUSC-39-5016	17	7578407	7578407	Missense_Mutation	TP53	p.R175G	721
LUSC-66-2744	17	7578407	7578407	Missense_Mutation	TP53	p.R175G	721
LUSC-66-2756	17	7578407	7578407	Missense_Mutation	TP53	p.R175G	721
LUSC-18-3410	3	178936091	178936091	Missense_Mutation	PIK3CA	p.E545K	654
LUSC-18-5595	3	178936091	178936091	Missense_Mutation	PIK3CA	p.E545K	654
LUSC-21-1071	3	178936091	178936091	Missense_Mutation	PIK3CA	p.E545K	654
LUSC-22-4613	3	178936091	178936091	Missense_Mutation	PIK3CA	p.E545K	654
LUSC-22-5491	3	178936091	178936091	Missense_Mutation	PIK3CA	p.E545K	654
LUSC-33-4583	3	178936091	178936091	Missense_Mutation	PIK3CA	p.E545K	654
LUSC-51-4079	3	178936091	178936091	Missense_Mutation	PIK3CA	p.E545K	654
LUSC-66-2759	3	178936091	178936091	Missense_Mutation	PIK3CA	p.E545K	654
LUSC-66-2766	3	178936091	178936091	Missense_Mutation	PIK3CA	p.E545K	654
LUSC-66-2785	3	178936091	178936091	Missense_Mutation	PIK3CA	p.E545K	654
LUSC-18-3416	17	7577550	7577550	Frame_Shift_Del	TP53	p.G244fs	414
LUSC-60-2710	17	7577550	7577550	Missense_Mutation	TP53	p.G244D	414
LUSC-34-5240	17	7577548	7577548	Missense_Mutation	TP53	p.G245S	399
LUSC-18-3415	17	7577092	7577093	Missense	TP53	p.R282R	374
LUSC-34-5929	17	7577094	7577094	Missense_Mutation	TP53	p.R282W	370
LUSC-66-2734	17	7577534	7577534	Missense_Mutation	TP53	p.R249S	360
LUSC-66-2791	17	7577547	7577547	Missense_Mutation	TP53	p.G245V	359
LUSC-66-2800	17	7577547	7577547	Missense_Mutation	TP53	p.G245V	359
LUSC-22-4595	17	7577532	7577532	Missense_Mutation	TP53	p.P250L	340
LUSC-21-1078	3	178936082	178936082	Missense_Mutation	PIK3CA	p.E542K	334
LUSC-22-5473	3	178936082	178936082	Missense_Mutation	PIK3CA	p.E542K	334
LUSC-60-2726	3	178936082	178936082	Missense_Mutation	PIK3CA	p.E542K	334
LUSC-34-5240	11	534286	534286	Missense_Mutation	HRAS	p.G13R	331
LUSC-21-1078	4	1803564	1803564	Missense_Mutation	FGFR3	p.R248C	210
LUSC-21-5786	11	533874	533874	Missense_Mutation	HRAS	p.Q61R	208
LUSC-34-2600	11	533875	533875	Missense_Mutation	HRAS	p.Q61K	208
LUSC-18-3410	17	7578212	7578212	Missense_Mutation	TP53	p.R213G	198
LUSC-39-5029	17	7578212	7578212	Nonsense_Mutation	TP53	p.R213*	198
LUSC-56-5897	17	7578212	7578212	Nonsense_Mutation	TP53	p.R213*	198
LUSC-60-2698	17	7578212	7578212	Nonsense_Mutation	TP53	p.R213*	198
LUSC-63-6202	12	25380275	25380275	Missense_Mutation	KRAS	p.Q61H	197
LUSC-22-1016	17	7578190	7578190	Missense_Mutation	TP53	p.Y220C	188
LUSC-60-2720	17	7578190	7578190	Missense_Mutation	TP53	p.Y220C	188
LUSC-39-5027	10	89692905	89692905	Missense_Mutation	PTEN	p.R130Q	187
LUSC-22-5492	17	7578188	7578188	Nonsense_Mutation	TP53	p.E221*	186
LUSC-18-3407	17	7578213	7578214	Frame_Shift_Del	TP53	p.F212fs	170
LUSC-18-5592	17	7578394	7578394	Missense_Mutation	TP53	p.H179L	165
LUSC-39-5037	17	7578395	7578395	Missense_Mutation	TP53	p.H179D	165
LUSC-56-6546	17	7578395	7578395	Missense_Mutation	TP53	p.H179Y	165
LUSC-60-2722	17	7578394	7578394	Missense_Mutation	TP53	p.H179R	165
LUSC-66-2793	17	7578394	7578394	Missense_Mutation	TP53	p.H179L	165
LUSC-21-5787	17	7578403	7578403	Missense_Mutation	TP53	p.C176Y	164
LUSC-22-4607	17	7578403	7578403	Missense_Mutation	TP53	p.C176F	164
LUSC-34-2600	4	55152092	55152092	Missense_Mutation	PDGFRA	p.D842H	164
LUSC-21-5782	17	7578265	7578265	Missense_Mutation	TP53	p.I195S	160
LUSC-22-4604	17	7578263	7578263	Nonsense_Mutation	TP53	p.R196*	160
LUSC-33-4582	17	7577106	7577106	Missense_Mutation	TP53	p.P278S	157
LUSC-66-2763	17	7577106	7577106	Missense_Mutation	TP53	p.P278A	157
LUSC-21-5786	17	7578461	7578461	Missense_Mutation	TP53	p.V157F	156
LUSC-22-5477	17	7578461	7578461	Missense_Mutation	TP53	p.V157F	156
LUSC-56-6545	17	7578461	7578461	Missense_Mutation	TP53	p.V157F	156
LUSC-39-5028	17	7577105	7577105	Missense_Mutation	TP53	p.P278L	139
LUSC-66-2794	17	7577105	7577105	Missense_Mutation	TP53	p.P278R	139
LUSC-18-3408	17	7577556	7577556	Missense_Mutation	TP53	p.C242F	135
LUSC-37-4141	17	7577556	7577556	Missense_Mutation	TP53	p.C242F	135
LUSC-37-5819	17	7577556	7577556	Missense_Mutation	TP53	p.C242F	135
LUSC-22-5478	17	7577099	7577099	Missense_Mutation	TP53	p.R280I	132
LUSC-39-5024	10	89692902	89692902	Missense_Mutation	PTEN	p.G129E	132
LUSC-34-5232	17	7577097	7577097	Missense_Mutation	TP53	p.D281Y	128
LUSC-34-2600	17	7577141	7577141	Missense_Mutation	TP53	p.G266V	126
LUSC-43-3920	17	7578271	7578271	Missense_Mutation	TP53	p.H193L	126
LUSC-46-3767	17	7578271	7578271	Missense_Mutation	TP53	p.H193R	126
LUSC-66-2766	17	7578271	7578271	Missense_Mutation	TP53	p.H193L	126
LUSC-33-4532	17	7577570	7577570	Missense_Mutation	TP53	p.M237I	124
LUSC-51-4079	12	112888210	112888210	Missense_Mutation	PTPN11	p.E76K	123
LUSC-33-4566	17	7578440	7578440	Missense_Mutation	TP53	p.K164E	115
LUSC-33-4583	17	7578457	7578457	Missense_Mutation	TP53	p.R158L	114
LUSC-34-2608	17	7578457	7578457	Missense_Mutation	TP53	p.R158L	114
LUSC-39-5035	17	7578457	7578457	Missense_Mutation	TP53	p.R158H	114
LUSC-63-5131	17	7578457	7578457	Missense_Mutation	TP53	p.R158L	114
LUSC-63-6202	17	7578457	7578457	Missense_Mutation	TP53	p.R158L	114
LUSC-66-2786	17	7578458	7578458	Missense_Mutation	TP53	p.R158G	114
LUSC-66-2787	17	7578458	7578458	Frame_Shift_Del	TP53	p.R158fs	114
LUSC-66-2795	17	7578457	7578457	Missense_Mutation	TP53	p.R158L	114
LUSC-85-6560	17	7578525	7578525	Missense_Mutation	TP53	p.C135W	114
LUSC-60-2719	17	7578272	7578272	Missense_Mutation	TP53	p.H193D	111
LUSC-21-1076	17	7578442	7578442	Missense_Mutation	TP53	p.Y163C	109
LUSC-56-5898	17	7578442	7578442	Missense_Mutation	TP53	p.Y163C	109
LUSC-66-2768	17	7578442	7578442	Missense_Mutation	TP53	p.Y163C	109
LUSC-60-2724	17	7577551	7577551	Missense_Mutation	TP53	p.G244C	104
LUSC-22-5485	17	7578443	7578444	In_Frame_Ins	TP53	p.162_163insI	93
LUSC-60-2726	9	21971186	21971186	Nonsense_Mutation	CDKN2A	p.R58*	90
LUSC-22-5489	17	7577022	7577022	Nonsense_Mutation	TP53	p.R306*	89
LUSC-66-2792	9	21971120	21971120	Nonsense_Mutation	CDKN2A	p.R80*	89
LUSC-66-2792	17	7577022	7577022	Nonsense_Mutation	TP53	p.R306*	89
LUSC-22-0944	17	7577580	7577580	Missense_Mutation	TP53	p.Y234C	83
LUSC-22-5474	17	7577580	7577580	Missense_Mutation	TP53	p.Y234S	83
LUSC-66-2727	17	7577580	7577580	Missense_Mutation	TP53	p.Y234C	83
LUSC-21-1078	4	153249384	153249384	Missense_Mutation	FBXW7	p.R465H	82
LUSC-22-5491	17	7578478	7578478	Missense_Mutation	TP53	p.P151R	82
LUSC-34-5236	17	7578535	7578535	Missense_Mutation	TP53	p.K132R	71
LUSC-18-4083	17	7578467	7578467	Missense_Mutation	TP53	p.T155P	66
LUSC-22-5489	10	89720808	89720808	Nonsense_Mutation	PTEN	p.L320*	65
LUSC-66-2758	11	534285	534285	Missense_Mutation	HRAS	p.G13V	55
LUSC-85-6561	17	7577090	7577090	Missense_Mutation	TP53	p.R283P	52
LUSC-18-3406	17	7578202	7578202	Missense_Mutation	TP53	p.V216E	51
LUSC-21-5787	7	140481403	140481403	Missense_Mutation	BRAF	p.G469R	49
LUSC-51-4081	17	7578469	7578469	Missense_Mutation	TP53	p.G154V	47
LUSC-60-2708	17	7578469	7578469	Frame_Shift_Del	TP53	p.G154fs	47
LUSC-22-5473	4	55593588	55593588	Missense_Mutation	KIT	p.M552L	46
LUSC-60-2708	3	10183766	10183766	Missense_Mutation	VHL	p.R79G	43
LUSC-56-6546	10	89717716	89717716	Missense_Mutation	PTEN	p.L247F	42
LUSC-22-4613	17	7577574	7577574	Missense_Mutation	TP53	p.Y236C	41
LUSC-39-5036	17	7578500	7578501	Frame_Shift_Ins	TP53	p.V143fs	39
LUSC-56-6546	10	89717718	89717718	Missense_Mutation	PTEN	p.P248H	39
LUSC-18-3409	17	7578200	7578221	Frame_Shift_Del	TP53	p.N210fs	38
LUSC-18-3407	9	21971029	21971029	Nonsense_Mutation	CDKN2A	p.W110*	37
LUSC-18-3421	17	7578415	7578415	Missense_Mutation	TP53	p.V172G	37
LUSC-66-2770	17	7577138	7577138	Missense_Mutation	TP53	p.R267P	37
LUSC-66-2792	17	7577138	7577138	Missense_Mutation	TP53	p.R267P	37
LUSC-39-5027	9	21971028	21971028	Nonsense_Mutation	CDKN2A	p.W110*	36
LUSC-18-4083	4	153247289	153247289	Missense_Mutation	FBXW7	p.R505G	35
LUSC-18-5595	4	153247289	153247289	Missense_Mutation	FBXW7	p.R505S	35
LUSC-33-6737	17	7577088	7577088	Missense_Mutation	TP53	p.T284P	35
LUSC-60-2722	4	153247289	153247289	Missense_Mutation	FBXW7	p.R505G	35
LUSC-18-3411	17	7577046	7577046	Nonsense_Mutation	TP53	p.E298*	33
LUSC-22-5473	17	7577046	7577046	Nonsense_Mutation	TP53	p.E298*	33
LUSC-33-4533	17	7577046	7577046	Nonsense_Mutation	TP53	p.E298*	33
LUSC-66-2742	7	55259524	55259524	Missense_Mutation	EGFR	p.L861Q	32
LUSC-70-6722	7	55259524	55259524	Missense_Mutation	EGFR	p.L861Q	32
LUSC-22-1012	17	7578177	7578177	Missense_Mutation	TP53	p.E224D	30
LUSC-51-4081	4	153247367	153247367	Nonsense_Mutation	FBXW7	p.R479*	30
LUSC-22-4593	9	21971017	21971017	Missense_Mutation	CDKN2A	p.P114L	29
LUSC-18-3411	9	21971019	21971019	Frame_Shift_Del	CDKN2A	p.L113fs	28
LUSC-22-1011	17	7577127	7577127	Missense_Mutation	TP53	p.E271K	28
LUSC-22-5480	17	7579358	7579358	Missense_Mutation	TP53	p.R110L	28
LUSC-33-4547	17	7577127	7577127	Missense_Mutation	TP53	p.E271K	28
LUSC-39-5019	17	7577127	7577127	Nonsense_Mutation	TP53	p.E271*	28
LUSC-18-3412	9	21971035	21971035	Missense_Mutation	CDKN2A	p.D108G	25
LUSC-60-2723	17	7578176	7578176	Splice_Site	TP53	p.E224_splice	25
LUSC-22-4599	9	21971036	21971036	Missense_Mutation	CDKN2A	p.D108Y	24
LUSC-22-5477	9	21971036	21971036	Missense_Mutation	CDKN2A	p.D108Y	24
LUSC-34-2596	9	21971036	21971036	Missense_Mutation	CDKN2A	p.D108Y	24
LUSC-39-5028	9	21971036	21971036	Missense_Mutation	CDKN2A	p.D108N	24
LUSC-43-2578	10	89711893	89711893	Missense_Mutation	PTEN	p.Q171K	24
LUSC-22-5482	17	7578556	7578556	Splice_Site	TP53	p.Y126_splice	23
LUSC-60-2721	17	7578239	7578239	Nonsense_Mutation	TP53	p.E204*	23
LUSC-66-2734	12	112926888	112926888	Missense_Mutation	PTPN11	p.G503V	23
LUSC-18-3421	10	89717678	89717678	Nonsense_Mutation	PTEN	p.E235*	22
LUSC-18-3407	3	178927980	178927980	Missense_Mutation	PIK3CA	p.C420R	21
LUSC-33-4538	9	21971114	21971114	Frame_Shift_Del	CDKN2A	p.V82fs	21
LUSC-18-4086	17	7577609	7577609	Splice_Site	TP53	p.V225_splice	20
LUSC-21-5786	9	21974768	21974768	Missense_Mutation	CDKN2A	p.A20E	20
LUSC-34-5927	17	7578382	7578382	Nonsense_Mutation	TP53	p.S183*	19
LUSC-18-3417	10	89692898	89692898	Missense_Mutation	PTEN	p.K128Q	18
LUSC-66-2755	3	178916936	178916936	Missense_Mutation	PIK3CA	p.R108L	18
LUSC-51-4080	17	7574017	7574017	Missense_Mutation	TP53	p.R337L	16
LUSC-56-1622	17	7574017	7574017	Missense_Mutation	TP53	p.R337L	16
LUSC-66-2754	17	7576853	7576853	Missense_Mutation	TP53	p.Q331H	16
LUSC-70-6723	17	7578370	7578370	Splice_Site	TP53	p.G187_splice	16
LUSC-33-6737	7	140481411	140481411	Missense_Mutation	BRAF	p.G466V	15
LUSC-37-4133	17	7578195	7578197	In_Frame_Del	TP53	p.V218del	15
LUSC-18-3419	17	7577505	7577506	Missense	TP53	p.D259V	14
LUSC-39-5024	17	7576928	7576928	Splice_Site	TP53	p.A307_splice	13
LUSC-51-4080	9	21971000	21971000	Nonsense_Mutation	CDKN2A	p.E120*	13
LUSC-60-2711	17	7577145	7577146	Frame_Shift_Ins	TP53	p.L264fs	13
LUSC-60-2725	9	21970901	21970901	Missense_Mutation	CDKN2A	p.D153N	13
LUSC-66-2767	17	7577156	7577156	Splice_Site	TP53	p.S261_splice	13
LUSC-34-5928	17	7577153	7577153	Missense_Mutation	TP53	p.G262V	12
LUSC-37-5819	3	178916930	178916930	Missense_Mutation	PIK3CA	p.G106V	12
LUSC-22-5492	9	21974695	21974696	Frame_Shift_Ins	CDKN2A	p.Y44fs	11
LUSC-39-5031	7	140481417	140481417	Missense_Mutation	BRAF	p.G464V	11
LUSC-46-6026	17	7577519	7577527	In_Frame_Del	TP53	p.LTI252del	11
LUSC-85-6175	17	29665757	29665757	Nonsense_Mutation	NF1	p.Y2285*	11
LUSC-18-3412	5	112175468	112175468	Missense_Mutation	APC	p.L1393I	10
LUSC-18-3416	9	21971003	21971003	Nonsense_Mutation	CDKN2A	p.E119*	10
LUSC-60-2707	10	89685287	89685287	Missense_Mutation	PTEN	p.H61R	10
LUSC-66-2787	9	21974677	21974677	Missense_Mutation	CDKN2A	p.Q50H	10
LUSC-34-5927	9	5070053	5070053	Splice_Site	JAK2	p.F547_splice	9
LUSC-46-3765	9	21971065	21971065	Missense_Mutation	CDKN2A	p.H98P	9
LUSC-33-4538	17	7578208	7578208	Missense_Mutation	TP53	p.H214R	8
LUSC-33-4583	10	89725055	89725055	Nonsense_Mutation	PTEN	p.Y346*	8
LUSC-39-5027	10	89692790	89692790	Missense_Mutation	PTEN	p.D92H	8
LUSC-43-6143	17	7578208	7578208	Missense_Mutation	TP53	p.H214R	8
LUSC-22-5492	18	48604789	48604789	Missense_Mutation	SMAD4	p.D537E	7
LUSC-33-4532	12	121432067	121432067	Missense_Mutation	HNF1A	p.R272S	7
LUSC-37-3789	17	7579494	7579494	Nonsense_Mutation	TP53	p.R65*	7
LUSC-37-4135	9	21971199	21971199	Missense_Mutation	CDKN2A	p.M53I	7
LUSC-39-5027	17	7577130	7577130	Missense_Mutation	TP53	p.F270I	7
LUSC-43-6770	17	7578235	7578235	Missense_Mutation	TP53	p.Y205C	7
LUSC-60-2724	3	178952079	178952079	Missense_Mutation	PIK3CA	p.D1045V	7
LUSC-18-3421	3	41266094	41266094	Missense_Mutation	CTNNB1	p.L31M	6
LUSC-34-5232	3	178916726	178916726	Missense_Mutation	PIK3CA	p.R38L	6
LUSC-39-5030	5	112175432	112175432	Missense_Mutation	APC	p.P1381S	6
LUSC-43-3920	10	89717708	89717708	Nonsense_Mutation	PTEN	p.Q245*	6
LUSC-66-2783	10	89717708	89717708	Nonsense_Mutation	PTEN	p.Q245*	6
LUSC-18-3414	3	178917478	178917478	Missense_Mutation	PIK3CA	p.G118D	5
LUSC-21-1078	12	25378645	25378645	Missense_Mutation	KRAS	p.C118S	5
LUSC-22-1012	9	21974792	21974792	Nonsense_Mutation	CDKN2A	p.S12*	5
LUSC-34-5240	13	48916852	48916852	Splice_Site	RB1	p.S127_splice	5
LUSC-39-5031	13	48916850	48916850	Missense_Mutation	RB1	p.S127I	5
LUSC-39-5031	17	7579378	7579378	Nonsense_Mutation	TP53	p.Y103*	5
LUSC-56-5897	10	89685281	89685281	Nonsense_Mutation	PTEN	p.S59*	5
LUSC-22-4593	17	7579527	7579542	Frame_Shift_Del	TP53	p.D49fs	4
LUSC-33-6737	17	7579355	7579355	Missense_Mutation	TP53	p.L111Q	4
LUSC-34-5231	9	21971006	21971006	Missense_Mutation	CDKN2A	p.A118P	4
LUSC-37-4135	17	7579485	7579485	Nonsense_Mutation	TP53	p.E68*	4
LUSC-66-2757	17	7579355	7579355	Missense_Mutation	TP53	p.L111R	4
LUSC-66-2765	17	7576851	7576851	Splice_Site	TP53	p.Q331_splice	4
LUSC-66-2773	3	178928079	178928079	Missense_Mutation	PIK3CA	p.E453K	4
LUSC-66-2788	10	89711960	89711960	Frame_Shift_Del	PTEN	p.L193fs	4
LUSC-18-4721	17	29496972	29496972	Missense_Mutation	NF1	p.Q181H	3
LUSC-21-5787	19	1207064	1207065	Frame_Shift_Ins	STK11	p.M51fs	3
LUSC-22-4593	4	153244155	153244156	Frame_Shift_Ins	FBXW7	p.G667fs	3
LUSC-22-4599	10	89720828	89720828	Frame_Shift_Del	PTEN	p.K327fs	3
LUSC-33-4566	22	30070892	30070892	Nonsense_Mutation	NF2	p.Q470*	3
LUSC-46-6025	17	7578416	7578416	Missense_Mutation	TP53	p.V172F	3
LUSC-60-2707	17	7579585	7579585	Frame_Shift_Del	TP53	p.P34fs	3
LUSC-60-2708	7	55241711	55241711	Missense_Mutation	EGFR	p.S720C	3
LUSC-63-5128	17	7576878	7576887	Frame_Shift_Del	TP53	p.K320fs	3
LUSC-66-2742	17	7573982	7573983	Missense	TP53	p.E349*	3
LUSC-66-2786	9	21974748	21974748	Nonsense_Mutation	CDKN2A	p.E27*	3
LUSC-18-3412	17	29684312	29684312	Missense_Mutation	NF1	p.D2632V	2
LUSC-21-1078	3	178936070	178936070	Missense_Mutation	PIK3CA	p.D538N	2
LUSC-22-4607	13	48881488	48881489	Frame_Shift_Ins	RB1	p.V70fs	2
LUSC-22-5471	17	29486068	29486068	Missense_Mutation	NF1	p.S82C	2
LUSC-22-5473	11	108098502	108098502	Splice_Site	ATM	p.K25_splice	2
LUSC-22-5491	9	139390779	139390779	Nonsense_Mutation	NOTCH1	p.S2471*	2
LUSC-33-4533	13	48916733	48916733	Splice_Site	RB1	p.G89_splice	2
LUSC-33-4547	18	48604754	48604754	Nonsense_Mutation	SMAD4	p.E526*	2
LUSC-33-6737	11	64577259	64577259	Missense_Mutation	MEN1	p.R108L	2
LUSC-34-5239	17	7579311	7579311	Splice_Site	TP53	p.T125_splice	2
LUSC-34-5927	23	63412728	63412728	Missense_Mutation	FAM123B	p.V147L	2
LUSC-37-4141	7	140453108	140453108	Missense_Mutation	BRAF	p.Q609H	2
LUSC-37-5819	19	1221314	1221314	Frame_Shift_Del	STK11	p.G279fs	2
LUSC-43-3394	5	112174187	112174187	Missense_Mutation	APC	p.S966G	2
LUSC-43-3394	9	21974819	21974819	Frame_Shift_Del	CDKN2A	p.P3fs	2
LUSC-60-2713	17	7579470	7579470	Frame_Shift_Del	TP53	p.V73fs	2
LUSC-60-2724	23	53230856	53230856	Missense_Mutation	KDM5C	p.E646V	2
LUSC-66-2754	19	1221314	1221314	Frame_Shift_Del	STK11	p.G279fs	2
LUSC-66-2777	10	134013907	134013907	Missense_Mutation	DPYSL4	p.G287S	2
LUSC-66-2782	17	29527558	29527558	Nonsense_Mutation	NF1	p.W336*	2
LUSC-66-2783	13	48953728	48953728	Splice_Site	RB1	p.R445_splice	2
LUSC-66-2783	17	7574035	7574035	Splice_Site	TP53	p.I332_splice	2
LUSC-66-2788	17	7579311	7579311	Splice_Site	TP53	p.T125_splice	2
LUSC-66-2800	5	112164609	112164609	Missense_Mutation	APC	p.K561N	2
LUSC-85-6560	5	112174043	112174043	Nonsense_Mutation	APC	p.E918*	2
LUSC-18-3407	7	37901736	37901736	Missense_Mutation	TXNDC3	p.A126V	1
LUSC-18-3409	4	5468460	5468460	Missense_Mutation	STK32B	p.E314K	1
LUSC-18-3409	7	103338452	103338452	Missense_Mutation	RELN	p.E331K	1
LUSC-18-3409	12	125292364	125292364	Missense_Mutation	SCARB1	p.E318K	1
LUSC-18-3409	19	17945968	17945969	Missense	JAK3	p.R657R	1
LUSC-18-3412	9	98232095	98232095	Missense_Mutation	PTCH1	p.S616I	1
LUSC-18-3412	23	108619384	108619384	Nonsense_Mutation	GUCY2F	p.E1055*	1
LUSC-18-3419	2	218683462	218683462	Missense_Mutation	TNS1	p.P1094Q	1
LUSC-18-3419	4	56308750	56308750	Missense_Mutation	CLOCK	p.Q652E	1
LUSC-18-3419	20	16360239	16360239	Missense_Mutation	KIF16B	p.R803Q	1
LUSC-18-4083	1	241663881	241663881	Missense_Mutation	FH	p.V416L	1
LUSC-18-4721	19	49459500	49459500	Missense_Mutation	BAX	p.F93L	1
LUSC-18-5592	13	28608124	28608124	Missense_Mutation	FLT3	p.K614N	1
LUSC-21-1070	10	88649924	88649924	Missense_Mutation	BMPR1A	p.F58Y	1
LUSC-21-5787	9	22451417	22451417	Missense_Mutation	DMRTA1	p.R341M	1
LUSC-22-0944	17	61907223	61907223	Missense_Mutation	PSMC5	p.R60W	1
LUSC-22-4593	5	41382419	41382419	Missense_Mutation	PLCXD3	p.D107E	1
LUSC-22-4599	5	90136422	90136422	Missense_Mutation	GPR98	p.R5547C	1
LUSC-22-4604	15	72582591	72582591	Nonsense_Mutation	CELF6	p.R134*	1
LUSC-22-4613	4	55979624	55979624	Nonsense_Mutation	KDR	p.R275*	1
LUSC-22-5472	3	179592165	179592165	Missense_Mutation	PEX5L	p.A226T	1
LUSC-22-5472	6	28094583	28094583	Missense_Mutation	ZSCAN16	p.R137L	1
LUSC-22-5473	2	237489155	237489155	Missense_Mutation	CXCR7	p.D16V	1
LUSC-22-5473	3	195611843	195611843	Missense_Mutation	TNK2	p.R99L	1
LUSC-22-5473	9	32632175	32632175	Missense_Mutation	TAF1L	p.Q1135E	1
LUSC-22-5485	2	220167078	220167078	Missense_Mutation	PTPRN	p.H259Y	1
LUSC-22-5485	19	56538872	56538872	Missense_Mutation	NLRP5	p.R425S	1
LUSC-33-4566	11	119148970	119148970	Missense_Mutation	CBL	p.G397V	1
LUSC-33-4566	12	29648348	29648348	Missense_Mutation	OVCH1	p.S108R	1
LUSC-33-4566	23	100611135	100611135	Missense_Mutation	BTK	p.H491D	1
LUSC-33-4583	15	60919521	60919521	Missense_Mutation	RORA	p.P18L	1
LUSC-33-4583	22	30398972	30398972	Missense_Mutation	MTMR3	p.V221F	1
LUSC-34-2596	17	7577025	7577025	Nonsense_Mutation	TP53	p.K305*	1
LUSC-34-2600	23	69353813	69353813	Missense_Mutation	IGBP1	p.E6K	1
LUSC-34-5231	3	47704056	47704056	Missense_Mutation	SMARCC1	p.W642C	1
LUSC-34-5231	20	42331428	42331428	Missense_Mutation	MYBL2	p.R417H	1
LUSC-34-5236	1	111060809	111060809	Missense_Mutation	KCNA10	p.Q201E	1
LUSC-34-5927	2	21232182	21232182	Nonsense_Mutation	APOB	p.R2520*	1
LUSC-34-5929	19	55814114	55814114	Missense_Mutation	BRSK1	p.R303W	1
LUSC-37-4133	14	94935676	94935676	Missense_Mutation	SERPINA9	p.P186T	1
LUSC-37-4133	7	92848753	92848754	Frame_Shift_Ins	HEPACAM2	p.S30fs	1
LUSC-37-5819	8	114031360	114031360	Nonsense_Mutation	CSMD3	p.W322*	1
LUSC-37-5819	19	17949164	17949164	Missense_Mutation	JAK3	p.S493R	1
LUSC-39-5016	1	186919850	186919850	Missense_Mutation	PLA2G4A	p.H442Q	1
LUSC-39-5016	9	133750280	133750280	Missense_Mutation	ABL1	p.V371L	1
LUSC-39-5021	13	48881542	48881542	Missense_Mutation	RB1	p.L88F	1
LUSC-39-5021	17	7578507	7578507	Missense_Mutation	TP53	p.C141W	1
LUSC-39-5029	14	94770791	94770791	Missense_Mutation	SERPINA6	p.S394R	1
LUSC-39-5030	7	100731660	100731660	Missense_Mutation	TRIM56	p.P356H	1
LUSC-39-5031	9	21837927	21837927	Missense_Mutation	MTAP	p.S123F	1
LUSC-39-5036	10	17271981	17271981	Missense_Mutation	VIM	p.E187G	1
LUSC-39-5037	17	41245215	41245215	Missense_Mutation	BRCA1	p.G778D	1
LUSC-43-2578	2	179434250	179434250	Missense_Mutation	TTN	p.R22969C	1
LUSC-43-6770	15	77771649	77771649	Missense_Mutation	HMG20A	p.D346Y	1
LUSC-46-3769	22	30035098	30035098	Nonsense_Mutation	NF2	p.S87*	1
LUSC-46-3769	17	7578230	7578230	Frame_Shift_Del	TP53	p.D207fs	1
LUSC-46-6026	8	10480563	10480563	Missense_Mutation	RP1L1	p.R50H	1
LUSC-51-4079	8	53852521	53852521	Missense_Mutation	NPBWR1	p.D18E	1
LUSC-51-4079	22	23524423	23524423	Missense_Mutation	BCR	p.A426S	1
LUSC-51-4079	17	7579545	7579545	Frame_Shift_Del	TP53	p.D48fs	1
LUSC-51-4081	17	29556400	29556400	Missense_Mutation	NF1	p.L923V	1
LUSC-51-4081	20	24523765	24523765	Missense_Mutation	TMEM90B	p.L11Q	1
LUSC-56-6545	16	85948115	85948115	Missense_Mutation	IRF8	p.A197E	1
LUSC-56-6545	19	9324709	9324710	Missense	OR7D4	p.Q269K	1
LUSC-60-2698	9	21970910	21970910	Missense_Mutation	CDKN2A	p.G150S	1
LUSC-60-2698	16	24105581	24105581	Missense_Mutation	PRKCB	p.G262R	1
LUSC-60-2710	10	123279562	123279562	Missense_Mutation	FGFR2	p.W290C	1
LUSC-60-2719	4	66189926	66189926	Missense_Mutation	EPHA5	p.R1007L	1
LUSC-60-2720	3	54930847	54930847	Missense_Mutation	CACNA2D3	p.A773V	1
LUSC-60-2722	8	6793613	6793613	Missense_Mutation	DEFA4	p.T75P	1
LUSC-60-2724	7	142641733	142641733	Missense_Mutation	KEL	p.D470E	1
LUSC-63-5128	4	55961023	55961023	Missense_Mutation	KDR	p.A973S	1
LUSC-63-5128	10	17737147	17737147	Missense_Mutation	STAM	p.G212V	1
LUSC-63-5128	15	67950889	67950889	Splice_Site	MAP2K5	p.G246_splice	1
LUSC-63-6202	11	17141433	17141433	Missense_Mutation	PIK3C2A	p.A916S	1
LUSC-66-2727	5	112173893	112173893	Missense_Mutation	APC	p.E868Q	1
LUSC-66-2734	13	32900678	32900678	Nonsense_Mutation	BRCA2	p.E187*	1
LUSC-66-2742	2	216289955	216289955	Missense_Mutation	FN1	p.P300T	1
LUSC-66-2754	2	179650444	179650444	Missense_Mutation	TTN	p.T799M	1
LUSC-66-2758	9	117797579	117797579	Missense_Mutation	TNC	p.E1897D	1
LUSC-66-2758	17	7579314	7579314	Missense_Mutation	TP53	p.T125P	1
LUSC-66-2780	10	123247514	123247514	Missense_Mutation	FGFR2	p.K659N	1
LUSC-66-2781	1	216850766	216850766	Missense_Mutation	ESRRG	p.E42Q	1
LUSC-66-2785	2	171264306	171264306	Missense_Mutation	MYO3B	p.E868Q	1
LUSC-66-2785	7	106508159	106508159	Missense_Mutation	PIK3CG	p.C51W	1
LUSC-66-2785	16	50821699	50821699	Missense_Mutation	CYLD	p.P682T	1
LUSC-66-2787	7	92848755	92848755	Nonsense_Mutation	HEPACAM2	p.S30*	1
LUSC-66-2791	13	37679333	37679333	Missense_Mutation	CSNK1A1L	p.R21G	1
LUSC-66-2793	11	108155174	108155174	Missense_Mutation	ATM	p.K1323E	1
LUSC-66-2795	16	55539304	55539304	Missense_Mutation	MMP2	p.L645V	1
LUSC-70-6722	3	134670256	134670256	Missense_Mutation	EPHB1	p.R56L	1
LUSC-85-6175	10	75276561	75276561	Missense_Mutation	USP54	p.L1208P	1
LUSC-85-6560	3	178936099	178936099	Missense_Mutation	PIK3CA	p.E547D	1
LUSC-85-6561	3	141499363	141499363	Missense_Mutation	GRK7	p.L254M	1
LUSC-85-6561	8	103341406	103341406	Missense_Mutation	UBR5	p.R413L	1
