Clinical Features	Time to Death		AGE		GENDER		HISTOLOGICAL.TYPE		PATHOLOGY.T		PATHOLOGY.N		PATHOLOGICSPREAD(M)		TUMOR.STAGE		RADIATIONS.RADIATION.REGIMENINDICATION		NEOADJUVANT.THERAPY	
	nCNV (%)	nWild-Type	logrank test_P	logrank test_Q	t-test_P	t-test_Q	Fisher's exact test_P	Fisher's exact test_Q	Fisher's exact test_P	Fisher's exact test_Q	Fisher's exact test_P	Fisher's exact test_Q	Fisher's exact test_P	Fisher's exact test_Q	Chi-square test_P	Chi-square test_Q	Fisher's exact test_P	Fisher's exact test_Q	Fisher's exact test_P	Fisher's exact test_Q	Fisher's exact test_P	Fisher's exact test_Q
1p gain	11 (3%)	402	0.43955	1	0.6637	1	1	1	1	1	0.61598	1	0.44014	1	0.77608	1	0.48326	1	1	1	0.3757	1
1q gain	47 (11%)	366	0.88856	1	0.4656	1	0.086783	1	0.17305	1	0.61709	1	0.31346	1	0.22976	1	0.068648	1	1	1	1	1
2p gain	40 (10%)	373	0.60445	1	0.60966	1	0.8686	1	0.044746	1	0.23941	1	0.060278	1	0.8946	1	0.049806	1	0.2639	1	0.47704	1
2q gain	39 (9%)	374	0.90642	1	0.78062	1	0.73761	1	0.043576	1	0.28605	1	0.017194	1	0.78634	1	0.018782	1	0.25795	1	0.22716	1
3p gain	20 (5%)	393	0.0012137	0.892	0.15184	1	0.49627	1	1	1	0.68613	1	0.29345	1	0.00010709	0.0799	0.35221	1	1	1	0.7512	1
3q gain	30 (7%)	383	4.7767e-05	0.0359	0.5885	1	0.34227	1	0.78265	1	0.90824	1	0.083541	1	0.0003638	0.27	0.059688	1	1	1	1	1
4p gain	3 (1%)	410	0.45731	1	0.56875	1	1	1	0.3461	1	1	1	0.065176	1	0.00037641	0.279	0.1902	1	1	1	0.36567	1
4q gain	5 (1%)	408	0.44493	1	0.85573	1	0.66812	1	0.50829	1	0.52244	1	0.10665	1	0.29122	1	0.046727	1	1	1	0.53263	1
5p gain	39 (9%)	374	0.80629	1	0.080457	1	0.23871	1	0.45304	1	0.79912	1	0.16262	1	0.34655	1	0.68109	1	1	1	0.46767	1
5q gain	21 (5%)	392	0.60863	1	0.28461	1	0.37371	1	0.33546	1	0.84605	1	0.11344	1	0.74183	1	0.74928	1	1	1	0.51602	1
6p gain	50 (12%)	363	0.74738	1	0.57351	1	0.76293	1	0.50641	1	0.36931	1	0.019154	1	0.99509	1	0.16341	1	1	1	1	1
6q gain	45 (11%)	368	0.67594	1	0.90019	1	0.75484	1	1	1	0.49187	1	0.017573	1	0.96897	1	0.079205	1	1	1	0.49369	1
7p gain	200 (48%)	213	0.2516	1	0.36195	1	1	1	0.0011892	0.875	0.77412	1	0.0043597	1	0.032045	1	6.4514e-05	0.0483	0.11268	1	0.3214	1
7q gain	175 (42%)	238	0.31256	1	0.44816	1	0.92061	1	0.011458	1	0.559	1	0.20405	1	0.018369	1	0.0046041	1	0.57656	1	1	1
8p gain	80 (19%)	333	0.8448	1	0.19945	1	0.61808	1	1	1	0.23747	1	0.41087	1	0.93489	1	0.61003	1	0.47674	1	1	1
8q gain	162 (39%)	251	0.60975	1	0.067837	1	0.26743	1	0.0067327	1	0.039318	1	0.71525	1	0.30022	1	0.38082	1	0.56393	1	0.77224	1
9p gain	46 (11%)	367	0.078584	1	0.54423	1	0.34708	1	0.35796	1	0.55248	1	0.60711	1	0.78624	1	0.60012	1	1	1	0.01148	1
9q gain	39 (9%)	374	0.06087	1	0.60761	1	0.17872	1	0.6222	1	0.19901	1	0.26215	1	0.79857	1	0.57096	1	1	1	0.0030092	1
10p gain	18 (4%)	395	0.0099912	1	0.097952	1	0.81299	1	0.71107	1	0.10833	1	0.015789	1	0.62193	1	0.12527	1	1	1	0.15384	1
10q gain	7 (2%)	406	0.78753	1	0.029876	1	1	1	0.23208	1	0.48083	1	0.038397	1	0.86044	1	0.14379	1	1	1	0.0089016	1
11p gain	18 (4%)	395	0.41206	1	0.19822	1	0.6308	1	0.14745	1	0.21475	1	0.11921	1	0.93047	1	0.10612	1	1	1	1	1
11q gain	22 (5%)	391	0.20276	1	0.050756	1	0.82779	1	0.095713	1	0.23463	1	0.044472	1	0.86363	1	0.018263	1	1	1	0.21468	1
12p gain	66 (16%)	347	0.65863	1	0.083677	1	1	1	0.68954	1	0.53707	1	0.034547	1	0.44598	1	0.052825	1	1	1	0.051413	1
12q gain	60 (15%)	353	0.84507	1	0.050291	1	0.88882	1	0.67668	1	0.695	1	0.067673	1	0.18774	1	0.029905	1	1	1	0.10536	1
13q gain	211 (51%)	202	0.7596	1	0.94163	1	0.37611	1	3.9957e-06	0.00301	0.9462	1	0.034853	1	0.12683	1	0.011714	1	0.24854	1	0.25732	1
14q gain	15 (4%)	398	0.50626	1	0.92181	1	0.4302	1	0.43043	1	0.72438	1	0.81014	1	0.003554	1	0.7061	1	1	1	0.24421	1
15q gain	5 (1%)	408	0.49292	1	0.70862	1	1	1	1	1	1	1	0.82877	1	0.82504	1	0.86347	1	1	1	0.53263	1
16p gain	67 (16%)	346	0.93844	1	0.20542	1	0.78957	1	0.017897	1	0.69599	1	0.0092391	1	0.66175	1	0.0095902	1	0.41283	1	0.33731	1
16q gain	66 (16%)	347	0.73789	1	0.10713	1	1	1	0.026954	1	0.69906	1	0.0019008	1	0.63333	1	0.0012877	0.945	0.40771	1	0.17472	1
17p gain	9 (2%)	404	0.20647	1	0.86348	1	0.73949	1	0.61347	1	0.58825	1	0.80119	1	0.00012665	0.0944	0.22363	1	1	1	0.11887	1
17q gain	48 (12%)	365	0.054449	1	0.33502	1	0.53877	1	0.064806	1	0.05882	1	0.32914	1	0.0060655	1	0.43281	1	0.31038	1	0.0032498	1
18p gain	15 (4%)	398	0.31924	1	0.81576	1	1	1	0.035076	1	0.84243	1	0.011927	1	6.1002e-06	0.00459	0.63453	1	1	1	1	1
18q gain	9 (2%)	404	0.69905	1	0.33058	1	0.51155	1	0.1019	1	0.44485	1	0.12041	1	0.90923	1	0.96153	1	1	1	1	1
19p gain	34 (8%)	379	0.60472	1	0.44488	1	0.85808	1	0.066939	1	0.486	1	0.33792	1	0.16766	1	0.92409	1	1	1	0.11834	1
19q gain	41 (10%)	372	0.28455	1	0.40261	1	0.86935	1	0.63052	1	0.95999	1	1	1	0.58941	1	0.8763	1	1	1	0.63436	1
20p gain	188 (46%)	225	0.28662	1	0.28334	1	0.059881	1	6.3966e-05	0.048	0.57953	1	0.57466	1	0.038231	1	0.079799	1	0.59354	1	0.39398	1
20q gain	267 (65%)	146	0.61445	1	0.62543	1	0.25698	1	2.8724e-08	2.17e-05	0.22174	1	0.24202	1	0.17023	1	0.024761	1	1	1	0.4624	1
21q gain	11 (3%)	402	0.15229	1	0.0058346	1	0.7616	1	1	1	0.028169	1	0.17163	1	0.79893	1	0.11105	1	1	1	1	1
Xq gain	12 (3%)	401	0.014485	1	0.31519	1	0.55946	1	0.66355	1	1	1	0.091895	1	1.4957e-07	0.000113	0.61602	1	1	1	1	1
1p loss	51 (12%)	362	0.010346	1	0.50713	1	1	1	0.12196	1	0.78299	1	0.029071	1	0.030313	1	0.038591	1	1	1	0.085042	1
1q loss	18 (4%)	395	0.55753	1	0.25561	1	0.6308	1	1	1	0.56519	1	0.44143	1	0.4239	1	0.58685	1	1	1	1	1
2p loss	4 (1%)	409	1.7518e-11	1.33e-08	0.69302	1	0.6264	1	1	1	0.77032	1	0.80369	1	0.87741	1	0.90569	1	1	1	1	1
2q loss	6 (1%)	407	2.9063e-07	0.000219	0.81041	1	0.22137	1	1	1	1	1	0.84691	1	0.76967	1	0.54359	1	1	1	1	1
3p loss	27 (7%)	386	7.6859e-05	0.0574	0.7541	1	0.32476	1	0.23263	1	0.062652	1	0.069733	1	0.026028	1	0.056732	1	1	1	0.40108	1
3q loss	12 (3%)	401	0.035134	1	0.017115	1	0.040623	1	0.38009	1	0.74383	1	0.77407	1	0.19001	1	0.1035	1	1	1	0.38828	1
4p loss	84 (20%)	329	0.0014161	1	0.7644	1	0.80696	1	0.010334	1	0.7193	1	0.022427	1	0.0021948	1	0.0062401	1	0.49542	1	0.014033	1
4q loss	68 (16%)	345	0.022143	1	0.47846	1	0.59591	1	0.017897	1	0.84088	1	0.10285	1	0.12494	1	0.076949	1	0.41792	1	0.035153	1
5p loss	25 (6%)	388	0.76096	1	0.81914	1	1	1	0.22681	1	0.80019	1	0.14538	1	0.82218	1	0.13861	1	0.17122	1	0.06622	1
5q loss	38 (9%)	375	0.34057	1	0.86651	1	0.060219	1	0.0433	1	0.91853	1	0.0047231	1	0.72887	1	0.2713	1	0.25196	1	0.63039	1
6p loss	12 (3%)	401	0.75529	1	0.62521	1	0.77702	1	1	1	0.80049	1	0.84242	1	0.36555	1	0.89479	1	1	1	1	1
6q loss	21 (5%)	392	0.011452	1	0.36808	1	1	1	0.74771	1	0.70579	1	0.033193	1	0.00018182	0.135	0.09389	1	1	1	1	1
8p loss	93 (23%)	320	0.60953	1	0.6405	1	0.23771	1	0.081036	1	0.83617	1	0.021817	1	0.11824	1	0.096449	1	0.53583	1	0.31331	1
8q loss	8 (2%)	405	0.88411	1	0.20995	1	0.29276	1	1	1	0.60082	1	0.25554	1	0.67393	1	0.1323	1	1	1	0.60709	1
9p loss	27 (7%)	386	0.21032	1	0.06532	1	1	1	0.55618	1	0.15762	1	0.77911	1	0.91853	1	0.75243	1	1	1	0.40108	1
9q loss	26 (6%)	387	0.73628	1	0.0044954	1	0.31072	1	0.22681	1	0.014108	1	0.60743	1	0.92615	1	0.22988	1	1	1	0.77314	1
10p loss	22 (5%)	391	0.81127	1	0.32132	1	0.51354	1	1	1	0.30461	1	0.5592	1	0.10443	1	0.1051	1	1	1	1	1
10q loss	24 (6%)	389	0.27998	1	0.17837	1	0.52929	1	1	1	0.50148	1	0.52031	1	0.20043	1	0.25457	1	1	1	1	1
11p loss	22 (5%)	391	0.2349	1	0.20745	1	1	1	0.33499	1	0.78564	1	0.53234	1	0.73618	1	0.34249	1	1	1	0.33912	1
11q loss	27 (7%)	386	0.72448	1	0.28542	1	0.42572	1	0.55618	1	0.35409	1	0.1744	1	0.45541	1	0.35978	1	1	1	0.40108	1
12p loss	21 (5%)	392	0.27832	1	0.77473	1	0.37371	1	0.09183	1	0.15965	1	0.051448	1	0.79695	1	0.24477	1	0.14525	1	1	1
12q loss	20 (5%)	393	0.38866	1	0.94073	1	0.25561	1	0.090359	1	0.28865	1	0.09833	1	0.74183	1	0.1638	1	1	1	0.7512	1
13q loss	6 (1%)	407	0.23703	1	0.62676	1	1	1	0.57385	1	0.15597	1	0.082323	1	0.49598	1	0.19555	1	1	1	1	1
14q loss	94 (23%)	319	0.34481	1	0.93875	1	0.63974	1	0.00071908	0.531	0.89278	1	0.088341	1	0.26646	1	0.28334	1	1	1	0.31517	1
15q loss	99 (24%)	314	0.3652	1	0.4238	1	0.90823	1	0.0017255	1	0.68662	1	0.55384	1	0.21463	1	0.20838	1	0.56153	1	0.86884	1
16p loss	9 (2%)	404	0.97704	1	0.99872	1	0.31502	1	0.3367	1	0.89728	1	0.89397	1	0.9933	1	0.47721	1	1	1	0.36771	1
16q loss	7 (2%)	406	0.47751	1	0.61229	1	0.71007	1	0.23208	1	0.74288	1	1	1	0.97983	1	0.79213	1	1	1	1	1
17p loss	164 (40%)	249	0.16227	1	0.33914	1	0.19125	1	5.3447e-06	0.00402	0.86708	1	0.0038969	1	0.0008873	0.654	0.00026545	0.197	0.56556	1	0.88505	1
17q loss	32 (8%)	381	0.70157	1	0.54379	1	0.71609	1	0.10109	1	0.74841	1	0.051824	1	0.37026	1	0.048767	1	1	1	0.066285	1
18p loss	209 (51%)	204	0.36453	1	0.10834	1	1	1	1.0271e-09	7.8e-07	0.85019	1	0.004447	1	0.029028	1	0.00066532	0.492	1	1	0.57163	1
18q loss	225 (54%)	188	0.26454	1	0.11873	1	0.42942	1	7.6109e-09	5.77e-06	0.94085	1	0.0027186	1	0.013988	1	0.00042245	0.313	0.25421	1	0.88765	1
19p loss	14 (3%)	399	0.29094	1	0.49974	1	0.27546	1	0.23189	1	0.29582	1	0.9278	1	0.22592	1	0.13995	1	1	1	0.7029	1
19q loss	13 (3%)	400	0.29094	1	0.72968	1	0.15578	1	0.23233	1	0.22193	1	1	1	0.16649	1	0.17754	1	1	1	1	1
20p loss	33 (8%)	380	0.56046	1	0.80598	1	0.58975	1	0.59905	1	0.73509	1	0.51271	1	0.71013	1	0.50762	1	1	1	1	1
21q loss	71 (17%)	342	0.66596	1	0.67548	1	0.89619	1	0.051411	1	0.15193	1	0.40675	1	0.92771	1	0.85696	1	1	1	0.34807	1
22q loss	81 (20%)	332	0.52723	1	0.10456	1	0.53514	1	7.2562e-05	0.0543	0.83946	1	0.035543	1	0.14768	1	0.080292	1	0.48145	1	0.1529	1
Xq loss	5 (1%)	408	0.72486	1	0.77952	1	0.66812	1	0.50829	1	0.2507	1	0.10665	1	0.86895	1	0.53597	1	1	1	0.53263	1