Clinical Features Time to Death AGE GENDER KARNOFSKY.PERFORMANCE.SCORE HISTOLOGICAL.TYPE RADIATIONS.RADIATION.REGIMENINDICATION NEOADJUVANT.THERAPY nCNV (%) nWild-Type logrank test_P logrank test_Q t-test_P t-test_Q Fisher's exact test_P Fisher's exact test_Q t-test_P t-test_Q Fisher's exact test_P Fisher's exact test_Q Fisher's exact test_P Fisher's exact test_Q Fisher's exact test_P Fisher's exact test_Q 1p gain 4 (3%) 141 1.3301e-05 0.0039 0.070384 1 0.31328 1 NA NA 0.016835 1 1 1 0.35954 1 1q gain 6 (4%) 139 0.13949 1 0.038069 1 0.40213 1 0.45704 1 0.23932 1 1 1 0.4353 1 7p gain 28 (19%) 117 0.0093728 1 0.033268 1 0.094119 1 0.74498 1 0.19877 1 0.085717 1 0.83491 1 7q gain 38 (26%) 107 0.01269 1 0.00066448 0.19 0.5686 1 0.64899 1 0.29179 1 0.24873 1 0.57559 1 8p gain 12 (8%) 133 0.69169 1 0.91153 1 0.55677 1 0.51077 1 0.47439 1 0.12308 1 0.23847 1 8q gain 15 (10%) 130 0.9215 1 0.47494 1 1 1 0.75025 1 0.19547 1 0.2806 1 0.17863 1 9p gain 3 (2%) 142 0.12223 1 0.018413 1 0.57603 1 NA NA 0.34829 1 1 1 0.61464 1 9q gain 3 (2%) 142 0.050654 1 0.23603 1 0.57603 1 NA NA 0.054869 1 0.27098 1 0.61464 1 10p gain 17 (12%) 128 0.52195 1 0.0071832 1 0.30123 1 0.17899 1 0.31225 1 0.43247 1 1 1 11p gain 7 (5%) 138 0.56411 1 0.5382 1 1 1 0.10206 1 0.48622 1 0.70092 1 0.2688 1 11q gain 11 (8%) 134 0.6796 1 0.33461 1 0.52962 1 0.47891 1 0.85427 1 1 1 0.76158 1 12p gain 7 (5%) 138 0.49571 1 0.017767 1 0.020118 1 NA NA 0.7925 1 1 1 0.44223 1 12q gain 3 (2%) 142 0.38124 1 0.0011137 0.316 0.26063 1 NA NA 1 1 0.56666 1 0.24511 1 18p gain 3 (2%) 142 0.51628 1 0.84744 1 0.57603 1 NA NA 0.054869 1 0.56666 1 0.61464 1 19p gain 8 (6%) 137 0.17506 1 0.010003 1 0.46677 1 0.093073 1 0.30128 1 0.14223 1 0.48799 1 19q gain 6 (4%) 139 0.00038769 0.112 0.051138 1 0.23882 1 0.31498 1 0.38444 1 0.40123 1 0.68127 1 20p gain 13 (9%) 132 4.2101e-05 0.0123 0.063141 1 0.55832 1 0.60692 1 0.13028 1 0.56068 1 0.777 1 20q gain 11 (8%) 134 9.5628e-05 0.0277 0.11933 1 0.52962 1 0.45802 1 0.20412 1 1 1 1 1 21q gain 4 (3%) 141 0.29261 1 0.99231 1 0.63574 1 NA NA 0.45368 1 0.64601 1 0.62007 1 1p loss 42 (29%) 103 0.10162 1 0.037406 1 0.71504 1 0.94101 1 7.8559e-14 2.35e-11 7.3637e-05 0.0214 0.85669 1 1q loss 7 (5%) 138 0.49988 1 0.031784 1 0.46106 1 0.12808 1 0.0028189 0.795 1 1 1 1 3q loss 7 (5%) 138 0.5893 1 0.93237 1 0.69891 1 0.51349 1 0.37524 1 1 1 0.71509 1 4p loss 13 (9%) 132 0.12163 1 0.16534 1 0.15412 1 0.35862 1 0.040702 1 0.14122 1 0.39405 1 4q loss 21 (14%) 124 0.094634 1 0.87272 1 0.47519 1 0.36037 1 0.2568 1 0.14815 1 0.24156 1 5p loss 10 (7%) 135 0.23408 1 0.94362 1 0.51664 1 0.18144 1 0.0070388 1 0.74041 1 0.52721 1 5q loss 7 (5%) 138 0.013536 1 0.88376 1 0.46106 1 0.44049 1 0.5486 1 0.24099 1 1 1 6q loss 14 (10%) 131 0.0081373 1 0.25099 1 0.2704 1 0.23648 1 0.0012585 0.356 0.0081659 1 0.26938 1 9p loss 29 (20%) 116 0.006154 1 0.083311 1 0.67576 1 0.90004 1 0.051657 1 0.0053831 1 0.14662 1 9q loss 3 (2%) 142 0.88492 1 0.09166 1 0.57603 1 NA NA 0.78578 1 0.56666 1 1 1 10p loss 22 (15%) 123 6.5012e-10 1.93e-07 8.0936e-06 0.00238 0.24894 1 0.4406 1 0.02342 1 0.48078 1 0.64656 1 10q loss 23 (16%) 122 1.3742e-09 4.07e-07 4.0364e-06 0.00119 0.17149 1 0.47333 1 0.01289 1 0.35666 1 0.49872 1 11p loss 15 (10%) 130 0.077302 1 0.12802 1 1 1 0.93853 1 0.0058577 1 0.2806 1 0.78939 1 11q loss 3 (2%) 142 0.00079372 0.226 0.19687 1 0.57603 1 NA NA 0.054869 1 0.27098 1 0.61464 1 12q loss 6 (4%) 139 0.55696 1 0.60004 1 1 1 NA NA 0.19616 1 1 1 0.68127 1 13q loss 17 (12%) 128 0.29613 1 0.70226 1 1 1 0.42833 1 0.8063 1 0.18838 1 0.44547 1 14q loss 17 (12%) 128 0.0032694 0.919 0.12036 1 0.06805 1 0.66407 1 0.22423 1 0.12087 1 0.6083 1 15q loss 9 (6%) 136 0.94316 1 0.84644 1 0.30107 1 NA NA 0.047775 1 0.15924 1 0.74177 1 16q loss 4 (3%) 141 0.94384 1 0.17929 1 1 1 NA NA 0.8268 1 0.14597 1 1 1 18p loss 10 (7%) 135 0.67048 1 0.68255 1 0.74457 1 0.39914 1 0.13363 1 1 1 0.52721 1 18q loss 12 (8%) 133 0.25262 1 0.90295 1 0.362 1 0.46677 1 0.033044 1 0.76188 1 0.55774 1 19p loss 5 (3%) 140 0.68249 1 0.65171 1 1 1 NA NA 0.44659 1 0.39703 1 0.67665 1 19q loss 49 (34%) 96 0.10763 1 0.11316 1 1 1 0.98482 1 3.4817e-10 1.04e-07 0.00060225 0.173 0.48904 1 21q loss 5 (3%) 140 0.94619 1 0.75125 1 1 1 NA NA 0.53167 1 1 1 0.67665 1 22q loss 10 (7%) 135 0.0002367 0.0684 0.91666 1 0.74457 1 0.20999 1 0.005998 1 0.52851 1 0.52721 1 Xq loss 3 (2%) 142 0.28911 1 0.18831 1 1 1 NA NA NA NA 0.27098 1 0.61464 1