Clinical Features Time to Death AGE GENDER RADIATIONS.RADIATION.REGIMENINDICATION NEOADJUVANT.THERAPY nCNV (%) nWild-Type logrank test_P logrank test_Q t-test_P t-test_Q Fisher's exact test_P Fisher's exact test_Q Fisher's exact test_P Fisher's exact test_Q Fisher's exact test_P Fisher's exact test_Q 1p gain 91 (11%) 752 0.16689 1 0.34678 1 1 1 0.012861 1 0.03653 1 1q gain 449 (53%) 394 0.070674 1 0.3033 1 1 1 0.25467 1 0.82911 1 2p gain 47 (6%) 796 0.78457 1 0.60193 1 1 1 0.47954 1 0.75458 1 2q gain 25 (3%) 818 0.97202 1 0.95696 1 1 1 0.0065555 1 0.092758 1 3p gain 50 (6%) 793 0.84609 1 0.0911 1 1 1 0.60954 1 0.64935 1 3q gain 94 (11%) 749 0.31685 1 0.85691 1 0.60817 1 1 1 0.81945 1 4p gain 29 (3%) 814 0.067179 1 0.48542 1 1 1 0.50994 1 0.43258 1 4q gain 27 (3%) 816 0.025174 1 0.35855 1 1 1 1 1 1 1 5p gain 159 (19%) 684 0.10662 1 0.042743 1 0.68055 1 0.047831 1 0.14174 1 5q gain 97 (12%) 746 0.33214 1 0.0025506 1 1 1 0.12521 1 0.36754 1 6p gain 93 (11%) 750 0.85616 1 0.14521 1 1 1 0.0094667 1 0.20692 1 6q gain 58 (7%) 785 0.2655 1 0.059539 1 0.47519 1 0.63135 1 0.88795 1 7p gain 151 (18%) 692 0.71205 1 0.12917 1 0.011789 1 0.025938 1 0.024789 1 7q gain 109 (13%) 734 0.46072 1 0.53428 1 0.019882 1 0.014832 1 0.0071633 1 8p gain 158 (19%) 685 0.71932 1 0.10387 1 0.67881 1 0.83505 1 0.92677 1 8q gain 358 (42%) 485 0.76435 1 0.02422 1 0.50619 1 0.048081 1 0.66298 1 9p gain 65 (8%) 778 0.5027 1 0.52565 1 1 1 0.28466 1 0.34574 1 9q gain 52 (6%) 791 0.69853 1 0.28724 1 1 1 0.061403 1 0.45944 1 10p gain 106 (13%) 737 0.80433 1 0.67147 1 0.61195 1 0.32598 1 0.51614 1 10q gain 44 (5%) 799 0.73083 1 0.3321 1 1 1 0.19916 1 0.023183 1 11p gain 62 (7%) 781 0.67545 1 0.85682 1 0.4989 1 0.64101 1 1 1 11q gain 44 (5%) 799 0.048451 1 0.81259 1 1 1 0.85475 1 1 1 12p gain 109 (13%) 734 0.7592 1 0.45135 1 0.019882 1 0.27628 1 0.39271 1 12q gain 83 (10%) 760 0.15759 1 0.11848 1 0.049979 1 0.33951 1 0.80945 1 13q gain 44 (5%) 799 0.80289 1 0.93954 1 1 1 0.58271 1 0.87291 1 14q gain 75 (9%) 768 0.25843 1 0.51296 1 1 1 0.31914 1 0.61405 1 15q gain 44 (5%) 799 0.61906 1 0.84007 1 0.38419 1 0.19916 1 0.10552 1 16p gain 235 (28%) 608 0.64586 1 0.029582 1 1 1 0.41425 1 0.29747 1 16q gain 52 (6%) 791 0.045451 1 0.80554 1 0.43777 1 1 1 0.18257 1 17p gain 45 (5%) 798 0.64337 1 0.44905 1 0.0095348 1 1 1 0.75178 1 17q gain 118 (14%) 725 0.81159 1 0.89744 1 0.026167 1 0.8146 1 0.14803 1 18p gain 81 (10%) 762 0.10242 1 0.022292 1 0.59898 1 0.03729 1 0.80793 1 18q gain 71 (8%) 772 0.13644 1 0.41465 1 0.54878 1 0.14156 1 0.60565 1 19p gain 67 (8%) 776 0.12436 1 0.17809 1 0.15594 1 0.069951 1 0.79123 1 19q gain 82 (10%) 761 0.019308 1 0.82695 1 0.21534 1 0.41382 1 0.90359 1 20p gain 231 (27%) 612 0.044759 1 0.087498 1 0.069036 1 0.85555 1 0.74726 1 20q gain 264 (31%) 579 0.13961 1 0.43414 1 0.1479 1 0.59867 1 0.81628 1 21q gain 98 (12%) 745 0.041408 1 0.035541 1 1 1 0.042895 1 0.37167 1 22q gain 38 (5%) 805 0.96215 1 0.35347 1 1 1 0.55904 1 1 1 Xq gain 20 (2%) 823 0.11879 1 0.11202 1 1 1 0.28105 1 1 1 1p loss 113 (13%) 730 0.30253 1 0.0088916 1 1 1 0.33967 1 0.091178 1 1q loss 20 (2%) 823 0.98661 1 0.63914 1 1 1 0.79377 1 0.81381 1 2p loss 69 (8%) 774 0.68989 1 0.23702 1 1 1 0.29789 1 0.60015 1 2q loss 83 (10%) 760 0.53954 1 0.41307 1 1 1 0.33951 1 0.90467 1 3p loss 88 (10%) 755 0.042216 1 0.041106 1 0.60889 1 0.35392 1 0.63867 1 3q loss 44 (5%) 799 0.26691 1 0.069155 1 1 1 0.043937 1 0.7469 1 4p loss 176 (21%) 667 0.4549 1 0.24967 1 1 1 0.16215 1 0.026854 1 4q loss 147 (17%) 696 0.4794 1 0.89084 1 0.37242 1 0.28392 1 0.18461 1 5p loss 68 (8%) 775 0.11618 1 0.082752 1 0.53266 1 1 1 0.18749 1 5q loss 118 (14%) 725 0.41305 1 0.15372 1 0.62142 1 0.8146 1 0.062502 1 6p loss 107 (13%) 736 0.25476 1 0.073983 1 0.61254 1 0.22317 1 0.91408 1 6q loss 164 (19%) 679 0.95742 1 0.0042088 1 0.21873 1 0.12328 1 0.65112 1 7p loss 46 (5%) 797 0.52598 1 0.40378 1 1 1 0.28118 1 0.52767 1 7q loss 60 (7%) 783 0.22894 1 0.11184 1 1 1 0.34452 1 0.78029 1 8p loss 265 (31%) 578 0.0044791 1 0.52113 1 1 1 0.66137 1 1 1 8q loss 42 (5%) 801 0.0036347 1 0.69018 1 1 1 0.85335 1 0.62077 1 9p loss 182 (22%) 661 0.0093469 1 0.91061 1 0.41482 1 0.55296 1 0.055305 1 9q loss 139 (16%) 704 0.015625 1 0.6365 1 0.17316 1 1 1 0.066028 1 10p loss 70 (8%) 773 0.071731 1 0.36484 1 1 1 0.76921 1 0.24081 1 10q loss 106 (13%) 737 0.0046993 1 0.64484 1 0.61195 1 0.71413 1 0.23334 1 11p loss 135 (16%) 708 0.028484 1 0.29224 1 0.36843 1 1 1 0.24053 1 11q loss 218 (26%) 625 0.28247 1 0.5635 1 0.054956 1 0.51554 1 0.46037 1 12p loss 65 (8%) 778 0.096624 1 0.92995 1 0.51604 1 0.64702 1 0.28315 1 12q loss 50 (6%) 793 0.22805 1 0.18272 1 1 1 0.49013 1 0.44815 1 13q loss 253 (30%) 590 0.080691 1 0.16812 1 0.4641 1 0.78999 1 0.75394 1 14q loss 125 (15%) 718 0.0078943 1 0.17669 1 0.37027 1 0.81989 1 0.18987 1 15q loss 153 (18%) 690 0.22494 1 0.15888 1 0.37669 1 0.39831 1 0.8521 1 16p loss 52 (6%) 791 0.68761 1 0.97092 1 0.10173 1 1 1 0.88237 1 16q loss 363 (43%) 480 0.022663 1 0.00049669 0.199 1 1 0.56538 1 0.3838 1 17p loss 352 (42%) 491 0.32676 1 0.034926 1 0.74189 1 0.18705 1 0.27484 1 17q loss 138 (16%) 705 0.61637 1 0.25243 1 0.36883 1 0.91244 1 0.56079 1 18p loss 167 (20%) 676 0.0063013 1 0.0015864 0.63 1 1 0.75948 1 0.92841 1 18q loss 166 (20%) 677 0.040712 1 0.0012301 0.491 1 1 0.60983 1 0.47034 1 19p loss 67 (8%) 776 0.56857 1 0.32647 1 1 1 0.29652 1 0.50704 1 19q loss 54 (6%) 789 0.90058 1 0.88915 1 1 1 0.7396 1 0.55913 1 20p loss 48 (6%) 795 0.001389 0.553 0.82626 1 0.41152 1 1 1 0.21797 1 20q loss 25 (3%) 818 0.79448 1 0.92221 1 1 1 0.81364 1 0.053999 1 21q loss 84 (10%) 759 0.98743 1 0.71809 1 0.61047 1 1 1 0.055847 1 22q loss 284 (34%) 559 0.12153 1 0.82289 1 0.1734 1 0.047962 1 0.93948 1 Xq loss 31 (4%) 812 0.056033 1 0.58515 1 0.040123 1 0.67185 1 1 1