Clinical Features	Time to Death		AGE		GENDER		KARNOFSKY.PERFORMANCE.SCORE		RADIATIONS.RADIATION.REGIMENINDICATION		NEOADJUVANT.THERAPY	
	nCNV (%)	nWild-Type	logrank test_P	logrank test_Q	t-test_P	t-test_Q	Fisher's exact test_P	Fisher's exact test_Q	t-test_P	t-test_Q	Fisher's exact test_P	Fisher's exact test_Q	Fisher's exact test_P	Fisher's exact test_Q
1p gain	38 (7%)	506	0.6068	1	0.61663	1	0.60632	1	0.86815	1	0.47606	1	1	1
1q gain	43 (8%)	501	0.98681	1	0.50323	1	1	1	0.97941	1	0.61194	1	0.87508	1
2p gain	18 (3%)	526	0.57689	1	0.19578	1	0.21917	1	0.30089	1	0.44843	1	0.33757	1
2q gain	16 (3%)	528	0.77188	1	0.50096	1	0.44041	1	0.73675	1	0.29041	1	1	1
3p gain	30 (6%)	514	0.12393	1	0.53153	1	1	1	0.83665	1	0.32221	1	0.18964	1
3q gain	30 (6%)	514	0.12647	1	0.43692	1	1	1	0.89187	1	0.32221	1	0.34972	1
4p gain	15 (3%)	529	0.081114	1	0.069534	1	0.79064	1	0.12732	1	0.40693	1	0.30347	1
4q gain	14 (3%)	530	0.030998	1	0.34192	1	0.78864	1	0.14638	1	0.24451	1	0.4255	1
5p gain	28 (5%)	516	0.91641	1	0.20592	1	0.69709	1	0.043501	1	0.14399	1	0.56359	1
5q gain	21 (4%)	523	0.71084	1	0.52038	1	0.49741	1	0.30127	1	0.23781	1	1	1
6p gain	7 (1%)	537	0.10038	1	0.098856	1	1	1	0.0002543	0.118	0.43817	1	1	1
6q gain	9 (2%)	535	0.13442	1	0.044908	1	0.74457	1	0.00025424	0.118	0.72532	1	0.74245	1
7p gain	423 (78%)	121	0.0048796	1	5.7895e-06	0.00272	1	1	0.53036	1	0.097552	1	0.67988	1
7q gain	427 (78%)	117	0.0060074	1	7.7838e-06	0.00364	0.59402	1	0.58403	1	0.14772	1	0.29655	1
8p gain	26 (5%)	518	0.76479	1	0.55258	1	0.53931	1	0.40233	1	0.83053	1	0.84257	1
8q gain	31 (6%)	513	0.83259	1	0.20517	1	0.34539	1	0.38943	1	1	1	1	1
9p gain	17 (3%)	527	0.2401	1	0.037774	1	0.31448	1	0.0062213	1	0.60005	1	0.46064	1
9q gain	32 (6%)	512	0.033859	1	0.048163	1	0.06116	1	0.02558	1	0.43901	1	0.71724	1
10p gain	11 (2%)	533	0.0030241	1	9.5511e-05	0.0446	0.029587	1	0.00025389	0.118	1	1	0.76398	1
11p gain	4 (1%)	540	0.56808	1	0.3829	1	0.64964	1	0.84148	1	1	1	0.35136	1
11q gain	7 (1%)	537	0.15194	1	0.21059	1	0.25356	1	0.091302	1	0.43817	1	0.45387	1
12p gain	40 (7%)	504	0.92753	1	0.15031	1	1	1	0.93013	1	0.59968	1	0.51615	1
12q gain	30 (6%)	514	0.49763	1	0.66676	1	0.44519	1	0.55432	1	0.32221	1	0.70857	1
13q gain	3 (1%)	541	0.99081	1	0.10391	1	0.061212	1	NA	NA	0.032903	1	0.60719	1
14q gain	6 (1%)	538	0.077113	1	0.81621	1	0.68508	1	0.51437	1	1	1	1	1
15q gain	5 (1%)	539	0.42664	1	0.18994	1	1	1	0.29238	1	0.65878	1	1	1
16p gain	17 (3%)	527	0.043967	1	0.024399	1	0.12964	1	0.70956	1	0.10974	1	0.80615	1
16q gain	17 (3%)	527	0.04492	1	0.067556	1	0.042157	1	0.97094	1	0.29122	1	0.80615	1
17p gain	10 (2%)	534	0.016848	1	0.035388	1	0.74696	1	0.091302	1	1	1	1	1
17q gain	18 (3%)	526	0.033931	1	0.12276	1	1	1	0.031764	1	0.80149	1	0.23987	1
18p gain	26 (5%)	518	0.84838	1	0.92893	1	1	1	0.096364	1	0.83053	1	1	1
18q gain	28 (5%)	516	0.81987	1	0.93807	1	0.69709	1	0.30109	1	0.83601	1	1	1
19p gain	170 (31%)	374	0.1973	1	0.45162	1	0.8503	1	0.79526	1	0.27722	1	0.57973	1
19q gain	147 (27%)	397	0.14062	1	0.24603	1	0.69408	1	0.77311	1	0.8366	1	0.33583	1
20p gain	174 (32%)	370	0.88798	1	0.00031493	0.145	0.70721	1	0.37082	1	0.2791	1	1	1
20q gain	172 (32%)	372	0.65055	1	0.00065682	0.303	0.57293	1	0.4064	1	0.1672	1	0.85392	1
21q gain	32 (6%)	512	0.13683	1	0.85628	1	1	1	0.63356	1	0.43901	1	0.58598	1
22q gain	11 (2%)	533	0.97046	1	0.39124	1	1	1	0.96754	1	0.51599	1	0.76398	1
Xq gain	3 (1%)	541	0.12846	1	0.59338	1	1	1	NA	NA	1	1	1	1
1p loss	5 (1%)	539	0.031557	1	0.70715	1	0.65288	1	0.86836	1	1	1	0.67275	1
1q loss	4 (1%)	540	0.72148	1	0.065831	1	0.64964	1	0.087318	1	1	1	1	1
2p loss	10 (2%)	534	0.17859	1	0.51556	1	0.20401	1	0.75962	1	1	1	1	1
2q loss	9 (2%)	535	0.23534	1	0.74273	1	0.32786	1	0.75962	1	0.72532	1	1	1
3p loss	22 (4%)	522	0.29288	1	0.022424	1	1	1	0.84583	1	0.018354	1	0.079121	1
3q loss	16 (3%)	528	0.77396	1	0.231	1	0.44041	1	0.70814	1	0.29041	1	0.80438	1
4p loss	25 (5%)	519	0.14028	1	0.29692	1	0.14179	1	0.82531	1	0.08296	1	1	1
4q loss	24 (4%)	520	0.21009	1	0.22862	1	0.67037	1	0.16715	1	0.51006	1	0.677	1
5p loss	21 (4%)	523	0.054479	1	0.27709	1	0.82123	1	0.50316	1	0.23781	1	1	1
5q loss	20 (4%)	524	0.059677	1	0.29352	1	0.6455	1	0.78565	1	0.3303	1	1	1
6p loss	47 (9%)	497	0.0079961	1	0.76079	1	0.87754	1	0.71055	1	0.74701	1	0.87946	1
6q loss	79 (15%)	465	0.27665	1	0.6556	1	0.53423	1	0.5807	1	0.8967	1	0.80768	1
7p loss	5 (1%)	539	0.51439	1	0.65841	1	1	1	0.60961	1	1	1	0.67275	1
7q loss	4 (1%)	540	0.61743	1	0.36249	1	1	1	NA	NA	1	1	0.35136	1
8p loss	34 (6%)	510	0.97234	1	0.42206	1	0.20861	1	0.54078	1	0.023279	1	0.48162	1
8q loss	21 (4%)	523	0.99462	1	0.43546	1	0.49741	1	0.13326	1	0.0037484	1	0.82434	1
9p loss	160 (29%)	384	0.74751	1	0.41017	1	0.77302	1	0.42683	1	0.42048	1	0.5099	1
9q loss	63 (12%)	481	0.39602	1	0.57548	1	0.013926	1	0.38382	1	0.77557	1	0.42492	1
10p loss	426 (78%)	118	0.00015153	0.0706	1.2559e-09	5.92e-07	0.39482	1	0.35799	1	0.31632	1	0.75494	1
10q loss	439 (81%)	105	0.00067974	0.313	2.4003e-07	0.000113	0.58047	1	0.096758	1	0.56212	1	0.3869	1
11p loss	64 (12%)	480	0.31174	1	0.222	1	0.22141	1	0.8904	1	0.25406	1	0.89488	1
11q loss	55 (10%)	489	0.96031	1	0.81437	1	0.77157	1	0.93379	1	0.0146	1	0.11714	1
12p loss	37 (7%)	507	0.59767	1	0.91319	1	0.86374	1	0.89009	1	0.58607	1	0.86614	1
12q loss	34 (6%)	510	0.57771	1	0.99155	1	1	1	0.60992	1	0.70643	1	1	1
13q loss	134 (25%)	410	0.97758	1	0.38954	1	0.41729	1	0.53787	1	0.7494	1	0.42629	1
14q loss	120 (22%)	424	0.99503	1	0.89106	1	0.75188	1	0.76931	1	1	1	0.21542	1
15q loss	62 (11%)	482	0.43289	1	0.18088	1	0.13186	1	0.48627	1	0.25014	1	1	1
16p loss	23 (4%)	521	0.15477	1	0.11853	1	0.51394	1	0.092929	1	1	1	0.13392	1
16q loss	40 (7%)	504	0.080741	1	0.92742	1	1	1	0.20432	1	1	1	0.10291	1
17p loss	35 (6%)	509	0.46622	1	0.28476	1	0.72219	1	0.64262	1	1	1	0.60305	1
17q loss	19 (3%)	525	0.93578	1	0.31493	1	0.81531	1	0.61983	1	0.62635	1	0.64915	1
18p loss	43 (8%)	501	0.30215	1	0.76789	1	0.87114	1	0.62466	1	0.61194	1	1	1
18q loss	38 (7%)	506	0.38355	1	0.43217	1	0.49665	1	0.34925	1	0.58945	1	0.86656	1
19p loss	13 (2%)	531	0.63493	1	0.18707	1	0.77524	1	0.5795	1	1	1	0.78091	1
19q loss	18 (3%)	526	0.19395	1	0.66728	1	1	1	0.27613	1	0.80149	1	0.6326	1
20p loss	11 (2%)	533	0.45646	1	0.13996	1	0.35685	1	0.7003	1	0.75183	1	0.76398	1
20q loss	10 (2%)	534	0.47291	1	0.46805	1	0.52665	1	0.61184	1	0.30406	1	1	1
21q loss	25 (5%)	519	0.84916	1	0.23503	1	0.21233	1	0.62862	1	0.66593	1	0.6862	1
22q loss	138 (25%)	406	0.64735	1	0.02881	1	0.7636	1	0.61315	1	1	1	0.76776	1
Xq loss	11 (2%)	533	0.22978	1	0.025548	1	0.75948	1	0.91351	1	0.51599	1	0.54988	1