Clinical Features Time to Death AGE GENDER KARNOFSKY.PERFORMANCE.SCORE HISTOLOGICAL.TYPE PATHOLOGY.T PATHOLOGY.N PATHOLOGICSPREAD(M) TUMOR.STAGE RADIATIONS.RADIATION.REGIMENINDICATION NEOADJUVANT.THERAPY nCNV (%) nWild-Type logrank test_P logrank test_Q t-test_P t-test_Q Fisher's exact test_P Fisher's exact test_Q t-test_P t-test_Q Chi-square test_P Chi-square test_Q Fisher's exact test_P Fisher's exact test_Q Fisher's exact test_P Fisher's exact test_Q Fisher's exact test_P Fisher's exact test_Q Fisher's exact test_P Fisher's exact test_Q Fisher's exact test_P Fisher's exact test_Q Fisher's exact test_P Fisher's exact test_Q Amp Peak 1(1p34.3) 82 (28%) 206 0.96587 1 0.0018728 1 1 1 0.4686 1 0.19201 1 0.87172 1 0.39347 1 0.49296 1 0.78463 1 0.6024 1 0.85742 1 Amp Peak 2(1p22.3) 77 (27%) 211 0.65755 1 0.0001207 0.0978 1 1 0.52417 1 0.15961 1 0.87824 1 0.16792 1 0.53505 1 0.4291 1 0.29485 1 0.13866 1 Amp Peak 3(1q21.3) 211 (73%) 77 0.12943 1 0.03551 1 0.1091 1 0.33159 1 0.038193 1 0.82206 1 0.67545 1 0.65867 1 0.94761 1 0.11403 1 0.35849 1 Amp Peak 4(3q26.2) 105 (36%) 183 0.78349 1 0.12262 1 1 1 0.6117 1 0.77331 1 0.79359 1 0.19046 1 0.42563 1 0.3125 1 0.46144 1 1 1 Amp Peak 5(4q12) 55 (19%) 233 0.2462 1 0.02475 1 0.45286 1 0.93978 1 0.17026 1 0.020332 1 0.78978 1 0.32277 1 0.66749 1 1 1 0.1463 1 Amp Peak 6(5p15.33) 186 (65%) 102 0.20172 1 0.0013712 1 0.048081 1 0.023752 1 0.27721 1 0.070618 1 0.52785 1 0.42095 1 0.59717 1 0.4646 1 0.30401 1 Amp Peak 7(5p13.2) 176 (61%) 112 0.028869 1 0.002956 1 0.039636 1 0.91748 1 0.31044 1 0.012381 1 0.16584 1 0.51755 1 0.25851 1 0.62882 1 0.74019 1 Amp Peak 8(5p12) 170 (59%) 118 0.04501 1 0.001915 1 0.040776 1 0.77781 1 0.3195 1 0.023629 1 0.38439 1 0.0929 1 0.21843 1 0.81176 1 1 1 Amp Peak 9(5q35.1) 68 (24%) 220 0.068523 1 0.31163 1 0.026043 1 0.84911 1 0.60193 1 0.50688 1 0.47414 1 0.65352 1 0.60915 1 0.40634 1 0.035331 1 Amp Peak 10(6p25.3) 110 (38%) 178 0.64605 1 0.15455 1 0.8078 1 0.98003 1 0.78253 1 0.55272 1 0.023809 1 0.326 1 0.15115 1 0.4657 1 1 1 Amp Peak 11(6p21.1) 102 (35%) 186 0.54818 1 0.21261 1 0.38781 1 0.80921 1 0.91969 1 0.48024 1 0.234 1 0.12828 1 0.57105 1 0.80812 1 0.30401 1 Amp Peak 12(7p15.3) 157 (55%) 131 0.89536 1 0.1212 1 0.55279 1 0.99309 1 0.65198 1 0.30256 1 0.1152 1 0.7915 1 0.30647 1 0.63506 1 0.41114 1 Amp Peak 13(7p11.2) 150 (52%) 138 0.14024 1 0.028352 1 0.72305 1 0.77781 1 0.53253 1 0.10131 1 0.0066808 1 0.73927 1 0.14191 1 0.81307 1 1 1 Amp Peak 14(7q31.2) 119 (41%) 169 0.95784 1 0.0058348 1 1 1 0.43961 1 0.48627 1 0.47813 1 0.2528 1 0.64919 1 0.56223 1 0.33987 1 0.74167 1 Amp Peak 15(8p11.21) 95 (33%) 193 0.44976 1 0.035508 1 0.043913 1 0.2933 1 0.28786 1 0.97014 1 0.19424 1 0.506 1 0.28906 1 1 1 0.1626 1 Amp Peak 16(8q11.1) 128 (44%) 160 0.70223 1 0.019098 1 0.47563 1 0.71841 1 0.23514 1 0.39599 1 0.48133 1 0.71851 1 0.54158 1 1 1 0.013584 1 Amp Peak 17(8q24.21) 185 (64%) 103 0.33698 1 0.13503 1 0.53793 1 0.97996 1 0.082086 1 0.31205 1 0.85314 1 0.951 1 0.90202 1 0.80741 1 0.4951 1 Amp Peak 18(11q13.3) 100 (35%) 188 0.96618 1 6.7146e-05 0.0545 0.32198 1 0.56725 1 0.48422 1 0.78862 1 0.48658 1 0.68178 1 0.13578 1 0.61874 1 0.60676 1 Amp Peak 19(12p12.1) 102 (35%) 186 0.0263 1 0.26015 1 0.90185 1 0.96941 1 0.75579 1 0.35345 1 0.22941 1 0.3534 1 0.5482 1 1 1 0.866 1 Amp Peak 20(12q14.1) 93 (32%) 195 0.16398 1 0.033387 1 0.80049 1 0.45072 1 0.71983 1 0.33898 1 0.36996 1 0.51764 1 0.16307 1 1 1 0.72902 1 Amp Peak 21(12q15) 95 (33%) 193 0.41149 1 0.13495 1 1 1 0.36104 1 0.72573 1 0.31007 1 0.28731 1 0.56212 1 0.40072 1 0.80148 1 1 1 Amp Peak 22(13q33.3) 47 (16%) 241 0.86424 1 0.90523 1 0.42932 1 NA NA 0.95288 1 0.61097 1 0.60746 1 0.57806 1 0.80577 1 1 1 0.5052 1 Amp Peak 23(14q13.3) 129 (45%) 159 0.47362 1 0.40086 1 0.47742 1 0.50855 1 0.51159 1 0.39295 1 0.95655 1 0.24776 1 0.86385 1 1 1 1 1 Amp Peak 24(17q12) 129 (45%) 159 0.81103 1 0.64462 1 1 1 0.12267 1 0.57877 1 0.52439 1 0.5941 1 0.14948 1 0.50545 1 0.15045 1 0.32401 1 Amp Peak 25(17q23.1) 139 (48%) 149 0.43725 1 0.25031 1 0.5551 1 0.52651 1 0.4501 1 0.33116 1 0.40631 1 0.23364 1 0.58997 1 0.81345 1 0.62428 1 Amp Peak 26(18q11.2) 63 (22%) 225 0.67017 1 0.22012 1 0.56942 1 0.80119 1 0.31063 1 0.76727 1 0.55354 1 0.45427 1 0.83954 1 0.26536 1 0.32997 1 Amp Peak 27(19q12) 75 (26%) 213 0.81191 1 0.21953 1 0.043969 1 0.27326 1 0.65477 1 0.61319 1 0.62268 1 0.76274 1 0.51829 1 0.4192 1 0.70986 1 Amp Peak 28(20q13.33) 137 (48%) 151 0.55887 1 0.37307 1 0.72283 1 0.21575 1 0.2304 1 0.11314 1 0.1589 1 0.18923 1 0.04821 1 0.35426 1 0.251 1 Amp Peak 29(22q11.22) 46 (16%) 242 0.45832 1 0.37085 1 0.33764 1 NA NA 0.33927 1 0.38362 1 0.34451 1 0.079871 1 0.31836 1 1 1 0.65717 1 Amp Peak 30(Xq28) 101 (35%) 187 0.17978 1 0.058954 1 0.17379 1 0.33097 1 0.30194 1 0.51642 1 0.34598 1 0.42777 1 0.28988 1 1 1 0.60927 1 Del Peak 1(1p36.13) 72 (25%) 216 0.035865 1 0.47985 1 0.10404 1 0.49703 1 0.63447 1 0.061465 1 0.094136 1 0.49299 1 0.10813 1 0.58312 1 0.85037 1 Del Peak 2(1p13.1) 91 (32%) 197 0.62737 1 0.10833 1 0.52617 1 0.66409 1 0.37439 1 0.61842 1 0.55468 1 0.55504 1 0.12899 1 1 1 0.48345 1 Del Peak 3(2q22.1) 32 (11%) 256 0.84282 1 0.14465 1 1 1 0.8198 1 0.43384 1 0.39162 1 0.38587 1 0.20117 1 0.14092 1 1 1 1 1 Del Peak 4(2q37.3) 42 (15%) 246 0.47793 1 0.80124 1 0.094158 1 0.4105 1 0.19699 1 0.92557 1 0.10773 1 0.37675 1 0.69507 1 0.086884 1 0.35485 1 Del Peak 5(3p21.31) 139 (48%) 149 0.88457 1 0.33154 1 0.90606 1 0.079823 1 0.2524 1 0.0069292 1 0.069014 1 0.52012 1 0.24592 1 0.34862 1 1 1 Del Peak 6(3q11.1) 81 (28%) 207 0.49224 1 0.47482 1 0.79371 1 0.10333 1 0.81006 1 0.99488 1 0.76434 1 0.67242 1 0.50672 1 0.60305 1 0.7171 1 Del Peak 7(3q29) 76 (26%) 212 0.68251 1 0.14318 1 0.42262 1 0.47824 1 0.69629 1 0.5071 1 0.23117 1 0.76443 1 0.10716 1 0.41954 1 0.85465 1 Del Peak 8(4p15.2) 67 (23%) 221 0.948 1 0.050377 1 0.88921 1 0.70109 1 0.20418 1 0.50688 1 0.49018 1 0.88046 1 0.56381 1 0.16259 1 1 1 Del Peak 9(4q35.1) 106 (37%) 182 0.70243 1 0.085809 1 0.22016 1 0.14534 1 0.22838 1 0.16947 1 0.34949 1 0.40468 1 0.70815 1 0.14759 1 0.31184 1 Del Peak 10(5q11.2) 105 (36%) 183 0.39652 1 0.012411 1 0.9023 1 0.56492 1 0.63715 1 0.63034 1 0.058311 1 0.36592 1 0.33595 1 0.46144 1 0.73686 1 Del Peak 11(5q33.1) 107 (37%) 181 0.28788 1 0.00081881 0.662 0.71363 1 0.82812 1 0.31539 1 0.24061 1 0.022949 1 0.74036 1 0.076866 1 0.14921 1 0.73574 1 Del Peak 12(6q12) 100 (35%) 188 0.20678 1 0.6655 1 0.38513 1 0.15127 1 0.63111 1 0.69838 1 0.091776 1 0.3948 1 0.01112 1 0.46763 1 0.73267 1 Del Peak 13(6q22.31) 143 (50%) 145 0.43098 1 0.50147 1 0.81308 1 0.14662 1 0.79886 1 0.78401 1 0.64334 1 0.57386 1 0.22242 1 1 1 1 1 Del Peak 14(6q26) 146 (51%) 142 0.5129 1 0.40649 1 0.34641 1 0.21425 1 0.53666 1 0.94861 1 0.42548 1 0.14444 1 0.061624 1 0.81568 1 0.744 1 Del Peak 15(8p23.2) 140 (49%) 148 0.81988 1 0.19183 1 0.23819 1 0.03944 1 0.032093 1 0.2826 1 0.64294 1 0.62721 1 0.97546 1 0.47965 1 0.51289 1 Del Peak 16(8p21.3) 149 (52%) 139 0.16663 1 0.69965 1 0.15598 1 0.034481 1 0.034606 1 0.30783 1 0.29328 1 0.14158 1 0.90838 1 0.34862 1 0.7444 1 Del Peak 17(9p23) 159 (55%) 129 0.089987 1 0.1426 1 1 1 0.74354 1 0.58646 1 0.92234 1 0.010445 1 0.84874 1 0.23833 1 0.63421 1 0.62362 1 Del Peak 18(9p21.3) 168 (58%) 120 0.47391 1 0.036734 1 0.18695 1 0.91748 1 0.86359 1 0.9295 1 0.0025398 1 0.93142 1 0.037784 1 1 1 0.50781 1 Del Peak 19(9q21.11) 143 (50%) 145 0.30178 1 0.30867 1 0.5567 1 0.9931 1 0.094266 1 0.36647 1 0.2807 1 0.28395 1 0.34736 1 0.15301 1 0.252 1 Del Peak 20(10p15.3) 73 (25%) 215 0.27579 1 0.42 1 0.0063209 1 0.69414 1 0.35187 1 0.37347 1 0.94339 1 0.13012 1 0.69031 1 0.42033 1 1 1 Del Peak 21(10q26.3) 77 (27%) 211 0.665 1 0.90134 1 0.0324 1 0.183 1 0.64536 1 0.09988 1 0.49836 1 1 1 0.16248 1 0.11403 1 0.5826 1 Del Peak 22(11p15.5) 79 (27%) 209 0.61779 1 0.056139 1 0.14519 1 0.35813 1 0.20207 1 0.96544 1 0.8037 1 0.13169 1 0.54303 1 1 1 0.35838 1 Del Peak 23(11q24.1) 70 (24%) 218 0.35602 1 0.36061 1 0.89045 1 0.20966 1 0.56148 1 1 1 0.15854 1 0.28835 1 0.71544 1 0.57977 1 0.34558 1 Del Peak 24(11q25) 67 (23%) 221 0.36888 1 0.89166 1 0.57634 1 0.6011 1 0.37059 1 0.94396 1 0.24648 1 0.34075 1 0.77478 1 0.57849 1 0.24843 1 Del Peak 25(12p13.2) 82 (28%) 206 0.23446 1 0.44608 1 0.0060035 1 0.95503 1 0.39736 1 0.66502 1 0.6614 1 0.37909 1 0.21041 1 0.79409 1 0.58998 1 Del Peak 26(12q24.33) 70 (24%) 218 0.6327 1 0.42371 1 0.27337 1 0.43606 1 0.00638 1 0.16315 1 0.83663 1 0.25863 1 0.69677 1 0.17675 1 0.7026 1 Del Peak 27(13q12.11) 154 (53%) 134 0.57865 1 0.095302 1 0.017603 1 0.016549 1 0.041368 1 0.54537 1 0.92887 1 0.15778 1 0.84943 1 0.63884 1 0.87114 1 Del Peak 28(13q12.13) 155 (54%) 133 0.69313 1 0.2599 1 0.075041 1 0.026812 1 0.018127 1 0.86843 1 0.90157 1 0.15778 1 0.88189 1 0.3446 1 0.62414 1 Del Peak 29(13q34) 125 (43%) 163 0.82468 1 0.046226 1 0.90528 1 0.72272 1 0.59239 1 0.77209 1 0.98521 1 0.14341 1 0.37606 1 0.81216 1 0.74404 1 Del Peak 30(14q32.13) 84 (29%) 204 0.53431 1 0.86433 1 0.89735 1 0.99612 1 0.4744 1 0.42816 1 0.073615 1 0.37027 1 0.12693 1 0.44226 1 0.072353 1 Del Peak 31(15q11.2) 152 (53%) 136 0.28459 1 0.1323 1 0.12463 1 0.19643 1 0.08903 1 0.4091 1 0.92898 1 0.97741 1 0.82365 1 1 1 0.87028 1 Del Peak 32(15q15.3) 158 (55%) 130 0.40117 1 0.10466 1 0.23476 1 0.19643 1 0.015699 1 0.43138 1 0.97087 1 0.91118 1 0.94257 1 0.48549 1 1 1 Del Peak 33(16q23.1) 101 (35%) 187 0.92321 1 0.28959 1 0.53662 1 0.48862 1 0.52126 1 0.62961 1 0.35282 1 0.87954 1 0.75161 1 1 1 0.49323 1 Del Peak 34(17p13.3) 167 (58%) 121 0.34178 1 0.066192 1 0.12142 1 0.66111 1 0.16447 1 0.25645 1 0.94161 1 0.78751 1 0.81588 1 0.15723 1 0.096219 1 Del Peak 35(18q21.32) 150 (52%) 138 0.30183 1 0.13745 1 0.12437 1 0.33097 1 0.57158 1 0.47828 1 0.36056 1 0.21773 1 0.26091 1 1 1 0.74577 1 Del Peak 36(19p13.3) 160 (56%) 128 0.055707 1 0.18857 1 0.0013138 1 0.84878 1 0.58909 1 0.18753 1 0.12194 1 0.50485 1 0.01593 1 0.6343 1 0.18693 1 Del Peak 37(19p13.2) 152 (53%) 136 0.36735 1 0.045316 1 0.00014291 0.116 0.9801 1 0.59583 1 0.33163 1 0.16126 1 0.2315 1 0.071921 1 1 1 0.51361 1 Del Peak 38(19p12) 124 (43%) 164 0.016386 1 0.020664 1 0.0087031 1 0.96948 1 0.86831 1 0.1183 1 0.0040895 1 0.12753 1 7.5541e-05 0.0613 0.81154 1 0.74324 1 Del Peak 39(19q13.33) 110 (38%) 178 0.049564 1 0.23392 1 0.18273 1 0.56344 1 0.38465 1 0.68986 1 0.67858 1 0.18637 1 0.21103 1 0.80813 1 0.50176 1 Del Peak 40(21q11.2) 103 (36%) 185 0.47071 1 0.054557 1 0.53793 1 0.63821 1 0.5157 1 0.82372 1 0.9687 1 0.75856 1 0.60857 1 0.32394 1 0.23394 1 Del Peak 41(21q21.3) 100 (35%) 188 0.36622 1 0.12021 1 0.082857 1 0.64164 1 0.76972 1 0.62776 1 0.96826 1 0.90351 1 0.5482 1 0.318 1 0.49407 1 Del Peak 42(22q13.32) 144 (50%) 144 0.5062 1 0.038108 1 0.28715 1 0.48192 1 0.47459 1 0.98189 1 0.32588 1 0.87099 1 0.56639 1 1 1 0.87008 1 Del Peak 43(Xp22.2) 84 (29%) 204 0.51976 1 0.18177 1 0.018903 1 0.90501 1 0.54928 1 0.8179 1 0.42929 1 0.67242 1 0.50904 1 1 1 0.47233 1 Del Peak 44(Xp21.3) 83 (29%) 205 0.72977 1 0.25861 1 0.049848 1 0.90501 1 0.61396 1 0.58805 1 0.78098 1 0.64722 1 0.71092 1 0.79578 1 0.71781 1